Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,312,754	T→C	K301R (AAG→AGG)	infB ←	protein chain initiation factor IF‑2

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,312,754	0	T	C	86.8%	809.6 / 105.8	334	K301R (AAG→AGG)	infB	protein chain initiation factor IF‑2
Reads supporting (aligned to +/- strand): ref base T (26/18); new base C (141/149); total (167/167)
Fisher's exact test for biased strand distribution p-value = 2.57e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01

Only 100 of 343 total aligned reads displayed.

CCTGAGAGCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCTTTTG  >  NC_000913/3312662‑3312844

   gagaGCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCctct                                                                                         >  2:6558236/1‑93 (MQ=255)

   gagaGCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCctct                                                                                         >  1:6444181/1‑93 (MQ=255)

   gagaGCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCctct                                                                                         <  2:3912657/93‑1 (MQ=255)

    agagCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTg                                                                                        >  1:278479/1‑93 (MQ=255)

     gagCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTgg                                                                                       <  1:4662531/93‑1 (MQ=255)

      agCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGa                                                                                      <  1:4320173/93‑1 (MQ=255)

      agCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGa                                                                                      >  2:587843/1‑93 (MQ=255)

      agCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGa                                                                                      >  2:1768320/1‑93 (MQ=255)

       gCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGaa                                                                                     >  1:5042700/1‑93 (MQ=255)

       gCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGaa                                                                                     <  2:1493636/93‑1 (MQ=255)

         cTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGc                                                                                   <  2:6336598/93‑1 (MQ=255)

          tttAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGcc                                                                                  >  2:2578936/1‑93 (MQ=255)

          tttAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGcc                                                                                  <  2:6646598/93‑1 (MQ=255)

          tttAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGcc                                                                                  >  2:1418701/1‑93 (MQ=255)

          tttAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGcc                                                                                  <  1:3715254/93‑1 (MQ=255)

           ttAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCt                                                                                 >  2:3817070/1‑93 (MQ=255)

           ttAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCt                                                                                 <  1:5160050/93‑1 (MQ=255)

           ttAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCt                                                                                 >  2:1346379/1‑93 (MQ=255)

            tAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCtt                                                                                <  1:7088416/93‑1 (MQ=255)

              aCCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGCCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTtgc                                                                              <  1:983078/93‑1 (MQ=255)

               ccGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTtgct                                                                             <  1:6267262/93‑1 (MQ=255)

               ccGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTtgct                                                                             <  2:6791/93‑1 (MQ=255)

                 gCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTtgctgc                                                                           >  1:266642/1‑93 (MQ=255)

                  ccATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCa                                                                          >  2:4744278/1‑93 (MQ=255)

                  ccATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCa                                                                          <  1:5629349/93‑1 (MQ=255)

                   cATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAg                                                                         >  2:1213017/1‑93 (MQ=255)

                    aTCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGc                                                                        >  2:845995/1‑93 (MQ=255)

                     tCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCg                                                                       >  2:2218223/1‑93 (MQ=255)

                       ttGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCgaa                                                                     <  1:7379288/93‑1 (MQ=255)

                        tGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCgaag                                                                    >  1:6820548/1‑93 (MQ=255)

                         gttcgccagttcgccaACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCgaaga                                                                   <  2:6900677/93‑1 (MQ=255)

                         gttcgccagttcgccaACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCgaaga                                                                   <  2:5354444/93‑1 (MQ=255)

                          ttcgccagttcgccaACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCgaagaa                                                                  <  2:3527047/93‑1 (MQ=255)

                          ttcgccagttcgccaACGGTGATAGTTGCGCCGATCACAGCGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCgaagaa                                                                  <  2:1092271/93‑1 (MQ=255)

                            cgccagttcgccaACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAAcc                                                                <  1:1080656/93‑1 (MQ=255)

                            cgccagttcgccaACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAAcc                                                                >  1:6511039/1‑93 (MQ=255)

                             gccagttcgccaACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCt                                                               >  2:2074899/1‑93 (MQ=255)

                             gccagttcgccaACGGTGATAGTATCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCt                                                               <  2:6972734/93‑1 (MQ=255)

                              ccagttcgccaACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCtt                                                              >  1:1915662/1‑93 (MQ=255)

                                agttcgccaACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTa                                                            <  1:5539901/93‑1 (MQ=255)

                                agttcgccaACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTa                                                            >  1:5963802/1‑93 (MQ=255)

                                 gttcgccaACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTAc                                                           >  2:5538648/1‑93 (MQ=255)

                                 gttcgccaACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTAc                                                           <  1:1422933/93‑1 (MQ=255)

                                  ttcgccaACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACg                                                          >  2:3638703/1‑93 (MQ=255)

                                   tcgccaACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGt                                                         <  2:6043718/93‑1 (MQ=255)

                                   tcgccaACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGt                                                         <  2:4827738/93‑1 (MQ=255)

                                     gccaACGGTGATGGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGttt                                                       >  2:3421610/1‑93 (MQ=255)

                                       caACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTc                                                     >  1:317118/1‑93 (MQ=255)

                                        aaCGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTcc                                                    >  2:3077797/1‑93 (MQ=255)

                                          cGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGc                                                  >  1:3934990/1‑93 (MQ=255)

                                            gTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCt                                                <  2:2774724/93‑1 (MQ=255)

                                            gTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCt                                                <  1:2329021/93‑1 (MQ=255)

                                            gTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCt                                                <  2:4506969/93‑1 (MQ=255)

                                            gTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCt                                                <  1:4434429/93‑1 (MQ=255)

                                             tGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCtt                                               >  1:1664493/1‑93 (MQ=255)

                                              gATGGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCttt                                              >  2:5134743/1‑93 (MQ=255)

                                              gATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCttt                                              >  1:1962747/1‑93 (MQ=255)

                                              gATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCttt                                              >  1:497753/1‑93 (MQ=255)

                                               aTAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTa                                             <  2:621230/93‑1 (MQ=255)

                                                tAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTAc                                            <  2:1844547/93‑1 (MQ=255)

                                                tAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTAc                                            >  2:4717022/1‑93 (MQ=255)

                                                tAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTAc                                            >  2:2470976/1‑93 (MQ=255)

                                                tAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTAc                                            <  2:4359176/93‑1 (MQ=255)

                                                tAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTAc                                            >  2:5953051/1‑93 (MQ=255)

                                                 aGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTAcc                                           <  2:2879639/93‑1 (MQ=255)

                                                  gTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCg                                          >  1:5815469/1‑93 (MQ=255)

                                                     tCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCa                                       >  1:473044/1‑93 (MQ=255)

                                                         cGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTa                                   <  2:5768538/93‑1 (MQ=255)

                                                          gATCACAACGTCACGGTTACCGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTAc                                  <  1:6947513/93‑1 (MQ=255)

                                                          gATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTAc                                  >  1:6092023/1‑93 (MQ=255)

                                                          gATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTAc                                  <  1:3850383/93‑1 (MQ=255)

                                                            tCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTActg                                <  1:773276/93‑1 (MQ=255)

                                                             cacaACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTActgc                               <  1:7269408/93‑1 (MQ=255)

                                                              acaACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTActgct                              >  1:2480888/1‑93 (MQ=255)

                                                              acaACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTActgct                              <  1:2055261/93‑1 (MQ=255)

                                                                aaCGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACtgctgc                            <  1:3410686/93‑1 (MQ=255)

                                                                aaCGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACtgctgc                            >  2:7353071/1‑93 (MQ=255)

                                                                 aCGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTgcg                           <  2:3322386/93‑1 (MQ=255)

                                                                   gTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGcgcg                         >  1:4743561/1‑93 (MQ=255)

                                                                   gTCACGGTCAACGGCATGAGCAGGCCTATGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGcgcg                         <  2:7520052/93‑1 (MQ=255)

                                                                    tCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGt                        >  1:6708191/1‑93 (MQ=255)

                                                                    tCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGt                        <  1:3231808/93‑1 (MQ=255)

                                                                      aCGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGc                      <  1:2259303/93‑1 (MQ=255)

                                                                      aCGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGc                      >  1:1528593/1‑93 (MQ=255)

                                                                      aCGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGc                      >  1:5892949/1‑93 (MQ=255)

                                                                       cGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGct                     >  2:1717390/1‑93 (MQ=255)

                                                                       cGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGct                     >  1:358915/1‑93 (MQ=255)

                                                                            aaCGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCttcttc                <  2:6261986/93‑1 (MQ=255)

                                                                               ggCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACg             >  1:1266782/1‑93 (MQ=255)

                                                                                gCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGa            >  1:5407005/1‑93 (MQ=255)

                                                                                  cTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATc          >  1:5458960/1‑93 (MQ=255)

                                                                                  cTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATc          >  2:5088131/1‑93 (MQ=255)

                                                                                   tGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCa         >  1:2186185/1‑93 (MQ=255)

                                                                                    gAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAg        >  1:4509796/1‑93 (MQ=255)

                                                                                      gCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCt      <  2:2761527/93‑1 (MQ=255)

                                                                                        aGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCttt    <  2:4560679/93‑1 (MQ=255)

                                                                                        aGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCttt    <  2:4172368/93‑1 (MQ=255)

                                                                                         ggCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCtttt   <  1:862520/93‑1 (MQ=255)

                                                                                         ggCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCtttt   >  2:7229241/1‑93 (MQ=255)

                                                                                         ggCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCtttt   >  1:4100990/1‑93 (MQ=255)

CCTGAGAGCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCTTTTG  >  NC_000913/3312662‑3312844

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

ACCTGAGAGCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCTTTTGATT  >  NC_000913/3312661‑3312847

ACCTGAGAGCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCT                                                                                               >  SRR4302542.7393964/1‑94 (MQ=60)

 CCTGAGAGCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTT                                                                                              >  SRR4302542.2802892/1‑94 (MQ=60)

 CCTGAGAGCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCT                                                                                              >  SRR4302542.6361375/1‑94 (MQ=60)

  CTGAGAGCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTC                                                                                             <  SRR4302542.6227886/94‑1 (MQ=60)

   TGAGAGCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCT                                                                                            >  SRR4302542.4380183/1‑94 (MQ=60)

   TGAGAGCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCT                                                                                            <  SRR4302542.4488261/94‑1 (MQ=60)

   TGAGAGCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCT                                                                                            >  SRR4302542.6507641/1‑94 (MQ=60)

    GAGAGCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTG                                                                                           >  SRR4302542.280859/1‑94 (MQ=60)

     AGAGCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGG                                                                                          <  SRR4302542.5813974/94‑1 (MQ=60)

     AGAGCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGG                                                                                          <  SRR4302542.6639385/94‑1 (MQ=60)

      GAGCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGA                                                                                         <  SRR4302542.4708108/94‑1 (MQ=60)

      GAGCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGA                                                                                         <  SRR4302542.4708109/94‑1 (MQ=60)

       AGCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAA                                                                                        >  SRR4302542.6061935/1‑94 (MQ=60)

       AGCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAA                                                                                        >  SRR4302542.1730545/1‑94 (MQ=60)

       AGCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAA                                                                                        >  SRR4302542.5091649/1‑94 (MQ=60)

       AGCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAA                                                                                        <  SRR4302542.4362649/94‑1 (MQ=60)

        GCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAG                                                                                       >  SRR4302542.4191189/1‑94 (MQ=60)

        GCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAG                                                                                       >  SRR4302542.386792/1‑94 (MQ=60)

         CCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGC                                                                                      >  SRR4302542.6829919/1‑94 (MQ=60)

          CTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCC                                                                                     <  SRR4302542.5835130/94‑1 (MQ=60)

          CTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCC                                                                                     <  SRR4302542.6681603/94‑1 (MQ=60)

          CTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCC                                                                                     >  SRR4302542.6572652/1‑94 (MQ=60)

           TTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCT                                                                                    <  SRR4302542.1196157/94‑1 (MQ=60)

           TTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCT                                                                                    <  SRR4302542.1196160/94‑1 (MQ=60)

           TTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCT                                                                                    >  SRR4302542.3568716/1‑94 (MQ=60)

           TTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCT                                                                                    <  SRR4302542.3752010/94‑1 (MQ=60)

            TTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTT                                                                                   >  SRR4302542.4122984/1‑94 (MQ=60)

            TTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTT                                                                                   <  SRR4302542.5210196/94‑1 (MQ=60)

             TAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTG                                                                                  <  SRR4302542.7157967/94‑1 (MQ=60)

              AACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGC                                                                                 >  SRR4302542.1406079/1‑94 (MQ=60)

               ACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCT                                                                                <  SRR4302542.390142/94‑1 (MQ=60)

               ACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGCCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCT                                                                                <  SRR4302542.991544/94‑1 (MQ=60)

                CCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTG                                                                               <  SRR4302542.6329030/94‑1 (MQ=60)

                 CGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAATGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGC                                                                              >  SRR4302542.7371915/1‑94 (MQ=60)

                 CGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGC                                                                              >  SRR4302542.268911/1‑94 (MQ=60)

                 CGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGC                                                                              >  SRR4302542.4640154/1‑94 (MQ=60)

                  GCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCA                                                                             >  SRR4302542.4520857/1‑94 (MQ=60)

                  GCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCA                                                                             <  SRR4302542.7524718/94‑1 (MQ=60)

                  GCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCA                                                                             <  SRR4302542.7294647/94‑1 (MQ=60)

                  GCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCA                                                                             >  SRR4302542.6331630/1‑94 (MQ=60)

                  GCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCA                                                                             >  SRR4302542.327044/1‑94 (MQ=60)

                   CCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAG                                                                            >  SRR4302542.1315038/1‑94 (MQ=60)

                   CCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAG                                                                            >  SRR4302542.5472657/1‑94 (MQ=60)

                   CCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAG                                                                            <  SRR4302542.5684000/94‑1 (MQ=60)

                   CCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAG                                                                            >  SRR4302542.265813/1‑94 (MQ=60)

                   CCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAG                                                                            <  SRR4302542.6547532/94‑1 (MQ=60)

                    CATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGC                                                                           <  SRR4302542.2342832/94‑1 (MQ=60)

                    CATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGC                                                                           <  SRR4302542.82463/94‑1 (MQ=60)

                     ATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCG                                                                          <  SRR4302542.4314443/94‑1 (MQ=60)

                     ATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCG                                                                          >  SRR4302542.4405605/1‑94 (MQ=60)

                     ATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCG                                                                          >  SRR4302542.4547236/1‑94 (MQ=60)

                       CTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAA                                                                        >  SRR4302542.206373/1‑94 (MQ=60)

                       CTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAA                                                                        >  SRR4302542.2505637/1‑94 (MQ=60)

                        TTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAG                                                                       <  SRR4302542.3107699/94‑1 (MQ=60)

                        TTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAG                                                                       >  SRR4302542.6887593/1‑94 (MQ=60)

                        TTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAG                                                                       <  SRR4302542.5979756/94‑1 (MQ=60)

                        TTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAG                                                                       <  SRR4302542.7451542/94‑1 (MQ=60)

                         TGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGA                                                                      >  SRR4302542.5568763/1‑94 (MQ=60)

                          GTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAA                                                                     >  SRR4302542.2601836/1‑94 (MQ=60)

                          GTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAA                                                                     <  SRR4302542.3702100/94‑1 (MQ=60)

                          GTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAA                                                                     <  SRR4302542.5104654/94‑1 (MQ=60)

                          GTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAA                                                                     >  SRR4302542.3779773/1‑94 (MQ=60)

                          GTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAA                                                                     <  SRR4302542.2900180/94‑1 (MQ=60)

                           TTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAAC                                                                    >  SRR4302542.50354/1‑94 (MQ=60)

                           TTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAAC                                                                    >  SRR4302542.1474561/1‑94 (MQ=60)

                            TCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACC                                                                   <  SRR4302542.5849282/94‑1 (MQ=60)

                            TCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACC                                                                   <  SRR4302542.587702/94‑1 (MQ=60)

                            TCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACC                                                                   >  SRR4302542.2998259/1‑94 (MQ=60)

                            TCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACC                                                                   <  SRR4302542.2273587/94‑1 (MQ=60)

                            TCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACC                                                                   >  SRR4302542.6575214/1‑94 (MQ=60)

                             CGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCT                                                                  <  SRR4302542.1089931/94‑1 (MQ=60)

                             CGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCT                                                                  >  SRR4302542.3814597/1‑94 (MQ=60)

                              GCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTT                                                                 >  SRR4302542.1932218/1‑94 (MQ=60)

                              GCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTT                                                                 <  SRR4302542.5424183/94‑1 (MQ=60)

                               CCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTT                                                                >  SRR4302542.5536844/1‑94 (MQ=60)

                               CCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTT                                                                >  SRR4302542.4769452/1‑94 (MQ=60)

                                CAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTA                                                               >  SRR4302542.6021539/1‑94 (MQ=60)

                                 AGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTAC                                                              <  SRR4302542.934490/94‑1 (MQ=60)

                                 AGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTAC                                                              <  SRR4302542.5593749/94‑1 (MQ=60)

                                 AGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTAC                                                              >  SRR4302542.2228375/1‑94 (MQ=60)

                                 AGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTAC                                                              <  SRR4302542.2358651/94‑1 (MQ=60)

                                  GTTCGCCAACGGTGATGGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACG                                                             <  SRR4302542.2071724/94‑1 (MQ=60)

                                  GTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACG                                                             <  SRR4302542.500820/94‑1 (MQ=60)

                                  GTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACG                                                             <  SRR4302542.1435252/94‑1 (MQ=60)

                                   TTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGT                                                            <  SRR4302542.3245231/94‑1 (MQ=60)

                                     CGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTT                                                          >  SRR4302542.913777/1‑94 (MQ=60)

                                      GCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTT                                                         <  SRR4302542.5035758/94‑1 (MQ=60)

                                      GCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTT                                                         >  SRR4302542.6775541/1‑94 (MQ=60)

                                       CCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTC                                                        >  SRR4302542.319877/1‑94 (MQ=60)

                                        CAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCC                                                       >  SRR4302542.1658440/1‑94 (MQ=60)

                                        CAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCC                                                       <  SRR4302542.6081274/94‑1 (MQ=60)

                                        CAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCC                                                       <  SRR4302542.558487/94‑1 (MQ=60)

                                         AACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCG                                                      >  SRR4302542.3680925/1‑94 (MQ=60)

                                          ACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGC                                                     >  SRR4302542.3973813/1‑94 (MQ=60)

                                             GTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTT                                                  <  SRR4302542.3934632/94‑1 (MQ=60)

                                             GTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTT                                                  <  SRR4302542.2348979/94‑1 (MQ=60)

                                             GTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTT                                                  <  SRR4302542.4477960/94‑1 (MQ=60)

                                             GTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTT                                                  >  SRR4302542.1678872/1‑94 (MQ=60)

                                             GTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTT                                                  >  SRR4302542.5195414/1‑94 (MQ=60)

                                              TGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTT                                                 >  SRR4302542.1979717/1‑94 (MQ=60)

                                              TGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTT                                                 >  SRR4302542.502038/1‑94 (MQ=60)

                                               GATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTA                                                >  SRR4302542.478868/1‑94 (MQ=60)

                                                ATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTAC                                               <  SRR4302542.1527954/94‑1 (MQ=60)

                                                 TAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACC                                              <  SRR4302542.2014192/94‑1 (MQ=60)

                                                 TAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACC                                              <  SRR4302542.7305303/94‑1 (MQ=60)

                                                 TAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACC                                              <  SRR4302542.610233/94‑1 (MQ=60)

                                                  AGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCG                                             <  SRR4302542.476066/94‑1 (MQ=60)

                                                  AGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCG                                             >  SRR4302542.5871902/1‑94 (MQ=60)

                                                     TTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCA                                          >  SRR4302542.477136/1‑94 (MQ=60)

                                                      TCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCAC                                         <  SRR4302542.7419947/94‑1 (MQ=60)

                                                       CGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACG                                        >  SRR4302542.7157404/1‑94 (MQ=60)

                                                       CGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACG                                        <  SRR4302542.692542/94‑1 (MQ=60)

                                                       CGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACG                                        <  SRR4302542.355695/94‑1 (MQ=60)

                                                          CGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTAC                                     >  SRR4302542.2341040/1‑94 (MQ=60)

                                                          CGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTAC                                     >  SRR4302542.6150995/1‑94 (MQ=60)

                                                          CGATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTAC                                     <  SRR4302542.4780662/94‑1 (MQ=60)

                                                           GATCACAACGTCACGGTTACCGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACT                                    <  SRR4302542.7015773/94‑1 (MQ=60)

                                                           GATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACT                                    <  SRR4302542.7497930/94‑1 (MQ=60)

                                                           GATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACT                                    >  SRR4302542.1488797/1‑94 (MQ=60)

                                                           GATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACT                                    <  SRR4302542.3888424/94‑1 (MQ=60)

                                                           GATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACT                                    >  SRR4302542.5916316/1‑94 (MQ=60)

                                                            ATCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTG                                   >  SRR4302542.7107190/1‑94 (MQ=60)

                                                             TCACAACGTCACGGTTAACGTCTTGAGCAGTCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGC                                  <  SRR4302542.2107445/94‑1 (MQ=60)

                                                             TCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGC                                  <  SRR4302542.779955/94‑1 (MQ=60)

                                                             TCACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGC                                  <  SRR4302542.2102311/94‑1 (MQ=60)

                                                              CACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCT                                 >  SRR4302542.2504942/1‑94 (MQ=60)

                                                              CACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCT                                 <  SRR4302542.4557291/94‑1 (MQ=60)

                                                              CACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCT                                 <  SRR4302542.7340670/94‑1 (MQ=60)

                                                              CACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCT                                 >  SRR4302542.2704073/1‑94 (MQ=60)

                                                               ACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTCGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACTTACTGTTG                                >  SRR4302542.6456377/1‑94 (MQ=60)

                                                               ACAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTG                                <  SRR4302542.2073023/94‑1 (MQ=60)

                                                                CAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGC                               <  SRR4302542.5377410/94‑1 (MQ=60)

                                                                CAACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGC                               >  SRR4302542.6922774/1‑94 (MQ=60)

                                                                 AACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCG                              <  SRR4302542.3442652/94‑1 (MQ=60)

                                                                 AACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCG                              >  SRR4302542.1834438/1‑94 (MQ=60)

                                                                 AACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCG                              >  SRR4302542.4130278/1‑94 (MQ=60)

                                                                  ACGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGC                             <  SRR4302542.6250835/94‑1 (MQ=60)

                                                                   CGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCG                            <  SRR4302542.785693/94‑1 (MQ=60)

                                                                   CGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCG                            >  SRR4302542.4789800/1‑94 (MQ=60)

                                                                   CGTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCG                            >  SRR4302542.4788591/1‑94 (MQ=60)

                                                                    GTCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGT                           >  SRR4302542.6774275/1‑94 (MQ=60)

                                                                     TCACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTG                          <  SRR4302542.3262374/94‑1 (MQ=60)

                                                                      CACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGC                         >  SRR4302542.1541790/1‑94 (MQ=60)

                                                                      CACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGC                         >  SRR4302542.5950056/1‑94 (MQ=60)

                                                                       ACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCT                        <  SRR4302542.2278727/94‑1 (MQ=60)

                                                                       ACGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCT                        >  SRR4302542.362044/1‑94 (MQ=60)

                                                                        CGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTT                       <  SRR4302542.5607367/94‑1 (MQ=60)

                                                                        CGGTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTT                       <  SRR4302542.323382/94‑1 (MQ=60)

                                                                          GTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCT                     <  SRR4302542.6637958/94‑1 (MQ=60)

                                                                          GTTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCT                     <  SRR4302542.5610965/94‑1 (MQ=60)

                                                                           TTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTT                    <  SRR4302542.1826726/94‑1 (MQ=60)

                                                                           TTAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTT                    <  SRR4302542.2341887/94‑1 (MQ=60)

                                                                            TAACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTC                   <  SRR4302542.6001375/94‑1 (MQ=60)

                                                                             AACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCA                  >  SRR4302542.1933069/1‑94 (MQ=60)

                                                                             AACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCA                  >  SRR4302542.86776/1‑94 (MQ=60)

                                                                              ACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCAC                 <  SRR4302542.5488644/94‑1 (MQ=60)

                                                                              ACGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCAC                 <  SRR4302542.708734/94‑1 (MQ=60)

                                                                               CGGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACG                >  SRR4302542.1277669/1‑94 (MQ=60)

                                                                                GGCCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGA               >  SRR4302542.5459529/1‑94 (MQ=60)

                                                                                  CCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATC             >  SRR4302542.5511996/1‑94 (MQ=60)

                                                                                  CCTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATC             <  SRR4302542.5398076/94‑1 (MQ=60)

                                                                                   CTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCA            >  SRR4302542.6349716/1‑94 (MQ=60)

                                                                                   CTGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCA            >  SRR4302542.2205017/1‑94 (MQ=60)

                                                                                    TGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAG           >  SRR4302542.3374085/1‑94 (MQ=60)

                                                                                    TGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAG           >  SRR4302542.4553996/1‑94 (MQ=60)

                                                                                    TGAGCAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAG           <  SRR4302542.1606259/94‑1 (MQ=60)

                                                                                        CAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCTTT       <  SRR4302542.4904290/94‑1 (MQ=60)

                                                                                        CAGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCTTT       >  SRR4302542.4019252/1‑94 (MQ=60)

                                                                                         AGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCTTTT      <  SRR4302542.6312889/94‑1 (MQ=60)

                                                                                         AGGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCTTTT      >  SRR4302542.4141429/1‑94 (MQ=60)

                                                                                          GGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCTTTTG     >  SRR4302542.1942536/1‑94 (MQ=60)

                                                                                          GGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCTTTTG     <  SRR4302542.3472316/94‑1 (MQ=60)

                                                                                          GGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCTTTTG     <  SRR4302542.869945/94‑1 (MQ=60)

                                                                                          GGCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCTTTTG     >  SRR4302542.3984295/1‑94 (MQ=60)

                                                                                           GCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCTTTTGA    <  SRR4302542.3942109/94‑1 (MQ=60)

                                                                                           GCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCTTTTGA    >  SRR4302542.4643185/1‑94 (MQ=60)

                                                                                           GCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCTTTTGA    <  SRR4302542.6877079/94‑1 (MQ=60)

                                                                                           GCCTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCTTTTGA    >  SRR4302542.5010177/1‑94 (MQ=60)

                                                                                             CTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCTTTTGATT  <  SRR4302542.7519276/94‑1 (MQ=60)

                                                                                             CTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCTTTTGATT  >  SRR4302542.3938723/1‑94 (MQ=60)

                                                                                             CTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCTTTTGATT  >  SRR4302542.919679/1‑94 (MQ=60)

ACCTGAGAGCCTTTAACCGCCATCTTGTTCGCCAGTTCGCCAACGGTGATAGTTTCGCCGATCACAACGTCACGGTTAACGGCCTGAGCAGGCTTCTGGAAGCCTTGCTGCAGCGAAGAACCTTTACGTTTTCCGCCTTTACCGCCACGTACTGCTGCGCGTGCTTCTTCACGATCAGCTTTTGATT  >  NC_000913/3312661‑3312847

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`