Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,342,129 |
A→G |
H182R (CAC→CGC) |
yhbG → |
putative ATP‑binding component of a transport system |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,342,129 | 0 | A | G | 82.3%
| 668.1
/ 137.9
| 316 | H182R (CAC→CGC) | yhbG | putative ATP‑binding component of a transport system |
| Reads supporting (aligned to +/- strand): ref base A (31/25); new base G (144/116); total (175/141) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 |
Only 100 of 318 total aligned reads displayed.
ACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGG > NC_000913/3342037‑3342221
|
cTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCAc > 1:162636/1‑93 (MQ=255)
cTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTgc < 2:2246100/93‑1 (MQ=255)
cTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTgc > 1:6189454/1‑93 (MQ=255)
aTCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACa > 1:3305099/1‑93 (MQ=255)
tCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAg < 1:6445896/93‑1 (MQ=255)
ccGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACTCATCATTGAGCGCCTGCGCGACAGc < 1:5417160/93‑1 (MQ=255)
ccGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGc < 1:5775149/93‑1 (MQ=255)
ccGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGc < 2:4640606/93‑1 (MQ=255)
cGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCg > 2:5552050/1‑93 (MQ=255)
cGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCg < 2:3244053/93‑1 (MQ=255)
cGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCg < 2:3275880/93‑1 (MQ=255)
gAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCgg > 2:1704709/1‑93 (MQ=255)
aaaTTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGc > 1:7168215/1‑93 (MQ=255)
aaaTTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGc < 2:5120371/93‑1 (MQ=255)
aaTTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGcc < 2:6336912/93‑1 (MQ=255)
aTTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCt > 2:6065418/1‑93 (MQ=255)
aTTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCt < 1:4525117/93‑1 (MQ=255)
aTTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCt > 2:5277929/1‑93 (MQ=255)
tttATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTg < 2:7244923/93‑1 (MQ=255)
ttATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTgg < 2:7196371/93‑1 (MQ=255)
tATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTggg < 1:3140331/93‑1 (MQ=255)
tATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTggg > 1:4995697/1‑93 (MQ=255)
aTTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGc < 2:4928990/93‑1 (MQ=255)
aTTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGc > 2:6914144/1‑93 (MQ=255)
aTTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGc < 1:3936484/93‑1 (MQ=255)
ttCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCg < 2:4000346/93‑1 (MQ=255)
tGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGc > 2:4264165/1‑93 (MQ=255)
tGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGc > 1:5259038/1‑93 (MQ=255)
tGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGc > 1:1165802/1‑93 (MQ=255)
gCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCt > 2:6302847/1‑93 (MQ=255)
cTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTg > 1:761488/1‑93 (MQ=255)
cTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTg < 1:1826414/93‑1 (MQ=255)
tCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGa > 2:914062/1‑93 (MQ=255)
cgacgaACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGAt > 2:738899/1‑93 (MQ=255)
cgacgaACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGAt < 1:6911832/93‑1 (MQ=255)
gacgaACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATc > 2:2678625/1‑93 (MQ=255)
gacgaACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATc < 2:3084798/93‑1 (MQ=255)
gacgaACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATc > 2:385800/1‑93 (MQ=255)
gacgaACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATc > 2:2170144/1‑93 (MQ=255)
acgaACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCa < 1:3710366/93‑1 (MQ=255)
cgaACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCAc < 2:459797/93‑1 (MQ=255)
aaCCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTg > 2:6250543/1‑93 (MQ=255)
aaCCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTg > 1:5695694/1‑93 (MQ=255)
aCCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGa > 2:115698/1‑93 (MQ=255)
ccGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGAc > 2:5727101/1‑93 (MQ=255)
cGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCGGATCACTGAcc > 2:7506941/1‑93 (MQ=255)
gTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACca > 1:2889049/1‑93 (MQ=255)
gTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACca > 2:5943759/1‑93 (MQ=255)
gCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAAc > 2:297207/1‑93 (MQ=255)
gCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAAc > 1:5938287/1‑93 (MQ=255)
gCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAAc > 1:6756724/1‑93 (MQ=255)
ggTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAAcgtgcg < 1:3376670/93‑1 (MQ=255)
ttGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAAcgtgcgtg > 2:3527044/1‑93 (MQ=255)
gACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGaa < 1:2838320/93‑1 (MQ=255)
gACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGaa > 1:2003528/1‑93 (MQ=255)
aCCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGaaa < 2:539742/93‑1 (MQ=255)
aCCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGaaa < 2:6494995/93‑1 (MQ=255)
cccGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACGGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAac > 1:7305556/1‑93 (MQ=255)
cccGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAac > 1:4392051/1‑93 (MQ=255)
ccGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAaca < 2:4456713/93‑1 (MQ=255)
cGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAacac > 1:4587547/1‑93 (MQ=255)
cGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAacac < 2:2003300/93‑1 (MQ=255)
cGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAacac > 1:6551297/1‑93 (MQ=255)
cGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAacac > 2:1519900/1‑93 (MQ=255)
aTCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTg > 1:5851734/1‑93 (MQ=255)
tctcGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTgg < 2:7119700/93‑1 (MQ=255)
tctcGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTgg < 2:1299762/93‑1 (MQ=255)
tctcGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTgg < 1:7273072/93‑1 (MQ=255)
ctcGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGc < 2:3426674/93‑1 (MQ=255)
cGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGTCAGCGGCCTGGGCGTGCTGATCACTGGCCACAACGTGCGTGAAACACTGGCgg < 2:1368487/93‑1 (MQ=255)
cGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCgg < 2:2884448/93‑1 (MQ=255)
cGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCgg < 1:4681897/93‑1 (MQ=255)
aTCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTtgt > 1:2333969/1‑93 (MQ=255)
tCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTtgtg > 1:2165208/1‑93 (MQ=255)
gACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGaa < 1:1014850/93‑1 (MQ=255)
gACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGaa > 1:6987927/1‑93 (MQ=255)
gACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGaa > 2:3191824/1‑93 (MQ=255)
gACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGaa > 2:2320986/1‑93 (MQ=255)
aCATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAAc > 1:6479700/1‑93 (MQ=255)
aCATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAAc < 1:4824673/93‑1 (MQ=255)
cATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAAcg > 1:1371324/1‑93 (MQ=255)
cATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAAcg > 1:1498753/1‑93 (MQ=255)
aTTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAAcgc > 2:3510789/1‑93 (MQ=255)
ttAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAAcgcg > 1:6035299/1‑93 (MQ=255)
ttAAACGCATCATTGAGCGCCCGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAAcgcg > 2:5802422/1‑93 (MQ=255)
aCGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTta < 1:5626406/93‑1 (MQ=255)
cGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTtat > 2:1241425/1‑93 (MQ=255)
gCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTtata < 2:2513417/93‑1 (MQ=255)
gCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTtata > 2:2599870/1‑93 (MQ=255)
catcatTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTatat < 2:3937490/93‑1 (MQ=255)
catcatTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTatat < 2:3015485/93‑1 (MQ=255)
atcatTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATc > 2:6961174/1‑93 (MQ=255)
atcatTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATc < 2:6827687/93‑1 (MQ=255)
atTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCgtc < 1:4093868/93‑1 (MQ=255)
atTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCgtc > 1:263909/1‑93 (MQ=255)
ttGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCgtca > 1:3581971/1‑93 (MQ=255)
tGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCgtcag > 2:7511925/1‑93 (MQ=255)
gAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCgtcagt > 1:5091904/1‑93 (MQ=255)
aGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCgtcagtc < 1:969448/93‑1 (MQ=255)
aGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCgtcagtc < 1:4283872/93‑1 (MQ=255)
|
ACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGG > NC_000913/3342037‑3342221
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGG > NC_000913/3342036‑3342222
|
CACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCG > SRR4302542.2537255/1‑94 (MQ=60)
CACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCA > SRR4302542.5284505/1‑94 (MQ=60)
ACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGC > SRR4302542.1974797/1‑94 (MQ=60)
ACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCAC > SRR4302542.164014/1‑94 (MQ=60)
CTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCC > SRR4302542.7360806/1‑94 (MQ=60)
GCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGC > SRR4302542.6249623/1‑94 (MQ=60)
CTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCG > SRR4302542.5841503/1‑94 (MQ=60)
CTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCG > SRR4302542.6269405/1‑94 (MQ=60)
CTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCG < SRR4302542.6728844/94‑1 (MQ=60)
GCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCG < SRR4302542.6915457/94‑1 (MQ=60)
CGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGA > SRR4302542.4794007/1‑94 (MQ=60)
CGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGA > SRR4302542.7228662/1‑94 (MQ=60)
AATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACA < SRR4302542.347975/94‑1 (MQ=60)
AATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACA > SRR4302542.3336267/1‑94 (MQ=60)
ATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAG > SRR4302542.5091487/1‑94 (MQ=60)
ATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAG > SRR4302542.5615910/1‑94 (MQ=60)
TCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGC < SRR4302542.6195798/94‑1 (MQ=60)
TCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGC > SRR4302542.1879569/1‑94 (MQ=60)
TCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGC < SRR4302542.6509378/94‑1 (MQ=60)
TCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGC < SRR4302542.5115938/94‑1 (MQ=60)
CCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACTCATCATTGAGCGCCTGCGCGACAGCG < SRR4302542.5469761/94‑1 (MQ=60)
CCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCG < SRR4302542.5831209/94‑1 (MQ=60)
CCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCG > SRR4302542.3272561/1‑94 (MQ=60)
CCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCG < SRR4302542.6529255/94‑1 (MQ=60)
CCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCG < SRR4302542.3937830/94‑1 (MQ=60)
CGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGG > SRR4302542.602896/1‑94 (MQ=60)
GAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGC > SRR4302542.6039739/1‑94 (MQ=60)
GAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGC > SRR4302542.7238529/1‑94 (MQ=60)
AATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCT > SRR4302542.4939072/1‑94 (MQ=60)
AATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCT < SRR4302542.7571571/94‑1 (MQ=60)
AATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCT > SRR4302542.1399131/1‑94 (MQ=60)
AATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCT > SRR4302542.623442/1‑94 (MQ=60)
ATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTG < SRR4302542.4569441/94‑1 (MQ=60)
ATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTG < SRR4302542.5748136/94‑1 (MQ=60)
TTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGG > SRR4302542.5612976/1‑94 (MQ=60)
TTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGG < SRR4302542.240680/94‑1 (MQ=60)
TTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGG > SRR4302542.7052694/1‑94 (MQ=60)
TTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGG > SRR4302542.5044232/1‑94 (MQ=60)
TTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGG < SRR4302542.836271/94‑1 (MQ=60)
TATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGC < SRR4302542.3170177/94‑1 (MQ=60)
ATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCG < SRR4302542.3975324/94‑1 (MQ=60)
TTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGT > SRR4302542.1759604/1‑94 (MQ=60)
TCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTG < SRR4302542.5866092/94‑1 (MQ=60)
CTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGC > SRR4302542.5310144/1‑94 (MQ=60)
CTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGC > SRR4302542.1175846/1‑94 (MQ=60)
GCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTG > SRR4302542.768087/1‑94 (MQ=60)
CTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGA > SRR4302542.7150340/1‑94 (MQ=60)
CTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGA > SRR4302542.7259541/1‑94 (MQ=60)
CTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGA < SRR4302542.1842229/94‑1 (MQ=60)
TCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGAT < SRR4302542.1881855/94‑1 (MQ=60)
CGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATC < SRR4302542.6979685/94‑1 (MQ=60)
GACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCA > SRR4302542.6846759/1‑94 (MQ=60)
ACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCAC < SRR4302542.4410181/94‑1 (MQ=60)
ACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCAC < SRR4302542.3747074/94‑1 (MQ=60)
GAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTG < SRR4302542.121467/94‑1 (MQ=60)
GAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTG > SRR4302542.159510/1‑94 (MQ=60)
GAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTG > SRR4302542.5750992/1‑94 (MQ=60)
AACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGA < SRR4302542.4067806/94‑1 (MQ=60)
ACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGAC > SRR4302542.671625/1‑94 (MQ=60)
ACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGAC > SRR4302542.5730667/1‑94 (MQ=60)
ACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGAC > SRR4302542.5985940/1‑94 (MQ=60)
ACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGAC > SRR4302542.362255/1‑94 (MQ=60)
CGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCA < SRR4302542.1070576/94‑1 (MQ=60)
CGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCA > SRR4302542.2916790/1‑94 (MQ=60)
GTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCAC > SRR4302542.6716980/1‑94 (MQ=60)
TGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAAC < SRR4302542.2925097/94‑1 (MQ=60)
TGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAAC > SRR4302542.5995814/1‑94 (MQ=60)
TGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAAC > SRR4302542.6823189/1‑94 (MQ=60)
GCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACG < SRR4302542.5988522/94‑1 (MQ=60)
CCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGT > SRR4302542.2913496/1‑94 (MQ=60)
GGGGGTTGACCCGATCTCGGTTACCAACATTAAACGCATCATTGAGCCCCTGCGCGACAGCGGCCTGGGCGGGCTGATCACTACCCACAACGGG > SRR4302542.2418197/1‑94 (MQ=60)
GGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCG < SRR4302542.7018995/94‑1 (MQ=60)
GGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGT < SRR4302542.3408398/94‑1 (MQ=60)
GTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTG < SRR4302542.7391287/94‑1 (MQ=60)
GTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTG < SRR4302542.2334308/94‑1 (MQ=60)
TGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAA > SRR4302542.2020829/1‑94 (MQ=60)
GACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAA < SRR4302542.2865598/94‑1 (MQ=60)
ACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACGGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAAC > SRR4302542.7377122/1‑94 (MQ=60)
ACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAAC > SRR4302542.4435142/1‑94 (MQ=60)
ACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAAC < SRR4302542.4930306/94‑1 (MQ=60)
CCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACA > SRR4302542.207114/1‑94 (MQ=60)
CCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACAC < SRR4302542.5409350/94‑1 (MQ=60)
CCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACAC > SRR4302542.4632419/1‑94 (MQ=60)
CCGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACAC > SRR4302542.6615885/1‑94 (MQ=60)
CCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACAC > SRR4302542.868598/1‑94 (MQ=60)
CGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACT < SRR4302542.7317242/94‑1 (MQ=60)
CGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACT > SRR4302542.3135574/1‑94 (MQ=60)
CGATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACT < SRR4302542.6451191/94‑1 (MQ=60)
GATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTG > SRR4302542.5908482/1‑94 (MQ=60)
GATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTG < SRR4302542.6612452/94‑1 (MQ=60)
GATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTG < SRR4302542.3922077/94‑1 (MQ=60)
ATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGG < SRR4302542.5424779/94‑1 (MQ=60)
ATCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGG > SRR4302542.5766674/1‑94 (MQ=60)
ATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGG > SRR4302542.6081510/1‑94 (MQ=60)
TCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGC < SRR4302542.2990036/94‑1 (MQ=60)
TCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGC > SRR4302542.7367716/1‑94 (MQ=60)
TCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGC < SRR4302542.4375290/94‑1 (MQ=60)
TCTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGC < SRR4302542.6604516/94‑1 (MQ=60)
TCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGC < SRR4302542.7344364/94‑1 (MQ=60)
CTCGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCG > SRR4302542.4643822/1‑94 (MQ=60)
CTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCG < SRR4302542.4136160/94‑1 (MQ=60)
CTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCG > SRR4302542.4116709/1‑94 (MQ=60)
CGGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGT < SRR4302542.4727642/94‑1 (MQ=60)
CGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCGGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGC > SRR4302542.1779907/1‑94 (MQ=60)
GGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACGACGTGCGTGAAACACTGGCGGTT > SRR4302542.5802360/1‑94 (MQ=60)
GGTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTT > SRR4302542.3930855/1‑94 (MQ=60)
GTTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTT > SRR4302542.4601265/1‑94 (MQ=60)
TTATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTG < SRR4302542.4671250/94‑1 (MQ=60)
TATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGT > SRR4302542.2353962/1‑94 (MQ=60)
ATCGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTG > SRR4302542.1291148/1‑94 (MQ=60)
ATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTG > SRR4302542.7512769/1‑94 (MQ=60)
ATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTG > SRR4302542.2183856/1‑94 (MQ=60)
CGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAA < SRR4302542.1130399/94‑1 (MQ=60)
CGACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAA > SRR4302542.7056568/1‑94 (MQ=60)
GACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAAC < SRR4302542.4219818/94‑1 (MQ=60)
GACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAAC < SRR4302542.453388/94‑1 (MQ=60)
GACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAAC > SRR4302542.4548583/1‑94 (MQ=60)
GACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAAC > SRR4302542.6543534/1‑94 (MQ=60)
GACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAAC < SRR4302542.4715639/94‑1 (MQ=60)
GACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAAC < SRR4302542.1023588/94‑1 (MQ=60)
ACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACG < SRR4302542.4871694/94‑1 (MQ=60)
ACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACG > SRR4302542.1511715/1‑94 (MQ=60)
ACATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACG > SRR4302542.1383179/1‑94 (MQ=60)
ACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACG > SRR4302542.332869/1‑94 (MQ=60)
CATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGC > SRR4302542.6542604/1‑94 (MQ=60)
CATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGC < SRR4302542.2851269/94‑1 (MQ=60)
ATTAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCG > SRR4302542.6093724/1‑94 (MQ=60)
TAAACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCT < SRR4302542.4603342/94‑1 (MQ=60)
AACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTA > SRR4302542.3590251/1‑94 (MQ=60)
ACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTAT < SRR4302542.1613025/94‑1 (MQ=60)
ACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTAT < SRR4302542.285335/94‑1 (MQ=60)
ACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTAT < SRR4302542.5681040/94‑1 (MQ=60)
ACGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTAT < SRR4302542.337172/94‑1 (MQ=60)
CGCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGGGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATA < SRR4302542.2890553/94‑1 (MQ=60)
GCATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATAT > SRR4302542.2283191/1‑94 (MQ=60)
ATCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCG > SRR4302542.1499174/1‑94 (MQ=60)
ATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCG < SRR4302542.5182293/94‑1 (MQ=60)
TCATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGT > SRR4302542.5377350/1‑94 (MQ=60)
CATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTC > SRR4302542.266160/1‑94 (MQ=60)
ATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCA > SRR4302542.3615388/1‑94 (MQ=60)
ATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCA > SRR4302542.3615389/1‑94 (MQ=60)
ATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCA < SRR4302542.4134251/94‑1 (MQ=60)
ATTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCA > SRR4302542.1975196/1‑94 (MQ=60)
ATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCA > SRR4302542.2115251/1‑94 (MQ=60)
TTGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAG > SRR4302542.3347908/1‑94 (MQ=60)
TGAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGT > SRR4302542.5141391/1‑94 (MQ=60)
GAGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTC < SRR4302542.2357830/94‑1 (MQ=60)
AGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCA < SRR4302542.4326007/94‑1 (MQ=60)
AGCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCA < SRR4302542.977800/94‑1 (MQ=60)
GCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAG < SRR4302542.4595023/94‑1 (MQ=60)
GCGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAG < SRR4302542.2283927/94‑1 (MQ=60)
CGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGG < SRR4302542.5869290/94‑1 (MQ=60)
CGCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGG > SRR4302542.1141225/1‑94 (MQ=60)
GCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGG < SRR4302542.7332922/94‑1 (MQ=60)
GCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGG < SRR4302542.5667343/94‑1 (MQ=60)
GCCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGG > SRR4302542.5702584/1‑94 (MQ=60)
ACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGG < SRR4302542.4837167/94‑1 (MQ=60)
ACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGG > SRR4302542.6968197/1‑94 (MQ=60)
|
CACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGG > NC_000913/3342036‑3342222
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
