Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,345,093 |
A→G |
E113G (GAA→GGA) |
yhbJ → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,345,093 | 0 | A | G | 84.8%
| 681.3
/ 116.2
| 296 | E113G (GAA→GGA) | yhbJ | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (15/30); new base G (126/124); total (141/155) |
| Fisher's exact test for biased strand distribution p-value = 3.65e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.99e-01 |
Only 100 of 302 total aligned reads displayed.
TGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCACGAGC > NC_000913/3345003‑3345185
|
tGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGgaa > 1:7072062/1‑93 (MQ=255)
ttCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGt < 2:6020289/93‑1 (MQ=255)
ttCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGt < 1:4586977/93‑1 (MQ=255)
ccTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGc < 1:2411159/93‑1 (MQ=255)
ccTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGc < 2:849295/93‑1 (MQ=255)
cTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCt < 2:6967620/93‑1 (MQ=255)
cTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCt < 2:4114248/93‑1 (MQ=255)
cTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCt < 1:3856104/93‑1 (MQ=255)
tGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTa < 1:1331740/93‑1 (MQ=255)
tGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGa > 2:1750299/1‑93 (MQ=255)
tGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGa < 2:6668306/93‑1 (MQ=255)
gCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGAc < 1:6641205/93‑1 (MQ=255)
ccGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACa < 1:2227042/93‑1 (MQ=255)
aCCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACaaag < 1:4468545/93‑1 (MQ=255)
cGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACaaagaa < 2:517115/93‑1 (MQ=255)
cGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACaaagaa < 1:1347861/93‑1 (MQ=255)
cGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACaaagaa < 1:5315929/93‑1 (MQ=255)
gTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACaaagaaa > 1:1446630/1‑93 (MQ=255)
gTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACaaagaaa > 2:230594/1‑93 (MQ=255)
tAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACaaagaaag > 2:3462886/1‑93 (MQ=255)
tAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACaaagaaag < 2:3614926/93‑1 (MQ=255)
aaTACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGc < 2:1398639/93‑1 (MQ=255)
aaTACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGc < 1:891928/93‑1 (MQ=255)
aTACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCg > 1:3230647/1‑93 (MQ=255)
tACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGa > 2:6714207/1‑93 (MQ=255)
tACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGa > 2:6511257/1‑93 (MQ=255)
tACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGa > 1:1806870/1‑93 (MQ=255)
aCCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGAt < 2:3683469/93‑1 (MQ=255)
ccTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGAtt < 1:4074154/93‑1 (MQ=255)
ccTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGAtt < 2:6167810/93‑1 (MQ=255)
cTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGAttt < 1:6024020/93‑1 (MQ=255)
ttAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTg > 1:4851765/1‑93 (MQ=255)
ttAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTg > 2:3882838/1‑93 (MQ=255)
aaTTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGTAAGTGCTATCGACAAAGAAAGCGATTTGCt < 1:7360593/93‑1 (MQ=255)
aaTTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCt > 2:1148083/1‑93 (MQ=255)
aTTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTg > 2:1338371/1‑93 (MQ=255)
aTTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTg < 1:4662537/93‑1 (MQ=255)
ttCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTgg > 2:5096280/1‑93 (MQ=255)
ttCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTgg > 1:7248341/1‑93 (MQ=255)
tcgtcgTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGa < 1:2965662/93‑1 (MQ=255)
gtagtTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGc < 1:5448955/90‑1 (MQ=255)
tcgtTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGcc < 2:2009985/93‑1 (MQ=255)
tcgtTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGACGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGCAGcc > 2:4736328/1‑93 (MQ=255)
cgtTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCct < 1:5165124/93‑1 (MQ=255)
gtTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCctc < 2:3274106/93‑1 (MQ=255)
gtTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCctc < 2:7086111/93‑1 (MQ=255)
gtTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCctc < 2:303887/93‑1 (MQ=255)
ttACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCctct > 2:1621861/1‑93 (MQ=255)
aGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGt > 2:7209527/1‑93 (MQ=255)
aGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGt < 2:2670337/93‑1 (MQ=255)
gTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGtt < 1:3390986/93‑1 (MQ=255)
gTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGtt > 1:163330/1‑93 (MQ=255)
gACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTcg < 2:3126513/93‑1 (MQ=255)
gACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTcg > 1:6818867/1‑93 (MQ=255)
acacGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTcgc < 2:4579545/93‑1 (MQ=255)
nngcgcCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGa < 1:140705/91‑1 (MQ=255)
acGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGa > 1:5521222/1‑93 (MQ=255)
acGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGa < 2:6223362/93‑1 (MQ=255)
cgcCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCg < 1:5742489/93‑1 (MQ=255)
gcCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCgg < 2:5720449/93‑1 (MQ=255)
ccGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGa < 2:6836925/93‑1 (MQ=255)
gACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATc > 1:262624/1‑93 (MQ=255)
gACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATc > 2:5427982/1‑93 (MQ=255)
aCTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCt < 2:1916912/93‑1 (MQ=255)
tGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGa > 2:2454853/1‑93 (MQ=255)
gCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGAt > 1:1685241/1‑93 (MQ=255)
gCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGAt < 1:7477105/93‑1 (MQ=255)
gCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGAt > 1:6321203/1‑93 (MQ=255)
cATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGAtt < 1:4382187/93‑1 (MQ=255)
cATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGAtt < 1:4237059/93‑1 (MQ=255)
cATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGAtt < 1:6582024/93‑1 (MQ=255)
cATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGAtt < 2:6253753/93‑1 (MQ=255)
aTCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTg < 1:442113/93‑1 (MQ=255)
aTCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTg < 1:4741594/93‑1 (MQ=255)
aTCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTg < 2:4445809/93‑1 (MQ=255)
tCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGt > 1:43441/1‑93 (MQ=255)
tCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGt > 1:3720074/1‑93 (MQ=255)
cGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCg > 1:4151176/1‑93 (MQ=255)
gCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGa < 1:6902685/93‑1 (MQ=255)
gCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGa < 2:4921832/93‑1 (MQ=255)
gCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGa < 1:2740892/93‑1 (MQ=255)
cTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGAt < 1:3539804/93‑1 (MQ=255)
cTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGAt > 1:5032678/1‑93 (MQ=255)
tttCCAGCAAAACCCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATa < 1:2336668/93‑1 (MQ=255)
tttCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATa > 1:7188438/1‑93 (MQ=255)
ttCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATAc > 2:3567951/1‑93 (MQ=255)
aGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCa > 2:4532240/1‑93 (MQ=255)
aGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCa < 1:1919621/93‑1 (MQ=255)
aaaaaCCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGaa > 1:6482554/1‑93 (MQ=255)
aaaaCCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGaaa > 2:3991622/1‑93 (MQ=255)
aaaaCCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGaaa < 1:2480020/93‑1 (MQ=255)
aaaaCCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGaaa < 2:7402795/93‑1 (MQ=255)
aaaCCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAAt > 2:3751003/1‑93 (MQ=255)
ccTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTc < 2:1490010/93‑1 (MQ=255)
tGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCg > 1:848676/1‑93 (MQ=255)
tGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCg > 1:5822958/1‑93 (MQ=255)
gTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGt < 2:3961577/93‑1 (MQ=255)
tCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGtt < 2:2589797/93‑1 (MQ=255)
cGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTc < 2:5318182/93‑1 (MQ=255)
tGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCACg > 1:1058569/1‑93 (MQ=255)
|
TGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCACGAGC > NC_000913/3345003‑3345185
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCCTGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAATGTCCGTTCACGAGCT > NC_000913/3345000‑3345186
|
TCCTGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGG < SRR4302542.3909441/94‑1 (MQ=60)
TCCTGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGG < SRR4302542.6144274/94‑1 (MQ=60)
CCTGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGA > SRR4302542.32315/1‑94 (MQ=60)
CCTGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGA > SRR4302542.5030038/1‑94 (MQ=60)
CTGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAA > SRR4302542.1749907/1‑94 (MQ=60)
CTGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAA < SRR4302542.6962538/94‑1 (MQ=60)
CTGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAA > SRR4302542.7141466/1‑94 (MQ=60)
CTGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAA > SRR4302542.4293642/1‑94 (MQ=60)
TGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAG < SRR4302542.6613825/94‑1 (MQ=60)
GTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGT > SRR4302542.7408525/1‑94 (MQ=60)
GTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGT > SRR4302542.5479832/1‑94 (MQ=60)
GTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGT < SRR4302542.4498861/94‑1 (MQ=60)
TTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTG < SRR4302542.4631846/94‑1 (MQ=60)
CCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCT < SRR4302542.2434602/94‑1 (MQ=60)
CCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCT > SRR4302542.191051/1‑94 (MQ=60)
CCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCT > SRR4302542.7273589/1‑94 (MQ=60)
CCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCT > SRR4302542.886729/1‑94 (MQ=60)
CTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTA < SRR4302542.3894197/94‑1 (MQ=60)
CTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTA > SRR4302542.6606075/1‑94 (MQ=60)
TGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTAT < SRR4302542.356404/94‑1 (MQ=60)
TGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTAT > SRR4302542.5282679/1‑94 (MQ=60)
TGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTAT < SRR4302542.1343212/94‑1 (MQ=60)
GATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCG > SRR4302542.4677903/1‑94 (MQ=60)
GCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACA < SRR4302542.6706666/94‑1 (MQ=60)
CCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAA < SRR4302542.2246205/94‑1 (MQ=60)
GACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAG < SRR4302542.7287541/94‑1 (MQ=60)
GACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAG > SRR4302542.817972/1‑94 (MQ=60)
ACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGA < SRR4302542.4512377/94‑1 (MQ=60)
CGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAA < SRR4302542.1359504/94‑1 (MQ=60)
CGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAA < SRR4302542.5367573/94‑1 (MQ=60)
CGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAA > SRR4302542.1459113/1‑94 (MQ=60)
GTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAG < SRR4302542.3105910/94‑1 (MQ=60)
GTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAG < SRR4302542.6529970/94‑1 (MQ=60)
GTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAG < SRR4302542.2010023/94‑1 (MQ=60)
AATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCG > SRR4302542.3261207/1‑94 (MQ=60)
AATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCG < SRR4302542.899652/94‑1 (MQ=60)
ATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGA > SRR4302542.5866664/1‑94 (MQ=60)
ATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGA > SRR4302542.1822524/1‑94 (MQ=60)
TACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGAT > SRR4302542.4245755/1‑94 (MQ=60)
TACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGAT > SRR4302542.4107210/1‑94 (MQ=60)
ACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATT < SRR4302542.7251180/94‑1 (MQ=60)
ACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATT < SRR4302542.6833454/94‑1 (MQ=60)
ACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATT > SRR4302542.4441115/1‑94 (MQ=60)
ACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATT < SRR4302542.4022006/94‑1 (MQ=60)
CCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTT > SRR4302542.3317650/1‑94 (MQ=60)
CCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTT > SRR4302542.7057765/1‑94 (MQ=60)
CCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTT < SRR4302542.1485828/94‑1 (MQ=60)
CCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTT < SRR4302542.4271364/94‑1 (MQ=60)
CCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTT < SRR4302542.4114319/94‑1 (MQ=60)
CTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTG > SRR4302542.4899011/1‑94 (MQ=60)
CTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTG > SRR4302542.5825470/1‑94 (MQ=60)
CTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTG > SRR4302542.2377878/1‑94 (MQ=60)
CTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTG < SRR4302542.6082354/94‑1 (MQ=60)
TTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGC > SRR4302542.2501551/1‑94 (MQ=60)
TTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGC < SRR4302542.6954319/94‑1 (MQ=60)
TAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCT < SRR4302542.3507855/94‑1 (MQ=60)
TAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCT > SRR4302542.7241762/1‑94 (MQ=60)
TAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCT < SRR4302542.430029/94‑1 (MQ=60)
TAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCT > SRR4302542.1424606/1‑94 (MQ=60)
AATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGTAAGTGCTATCGACAAAGAAAGCGATTTGCTG < SRR4302542.7432689/94‑1 (MQ=60)
AATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTG < SRR4302542.4409793/94‑1 (MQ=60)
ATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGG < SRR4302542.1410921/94‑1 (MQ=60)
ATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGG < SRR4302542.4708114/94‑1 (MQ=60)
ATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGG < SRR4302542.6869306/94‑1 (MQ=60)
ATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGG > SRR4302542.7319409/1‑94 (MQ=60)
TCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAG > SRR4302542.4497013/1‑94 (MQ=60)
TCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAG < SRR4302542.2994074/94‑1 (MQ=60)
GTAGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCC < SRR4302542.5501895/94‑1 (MQ=60)
CGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTC < SRR4302542.5215324/94‑1 (MQ=60)
GTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCT < SRR4302542.165855/94‑1 (MQ=60)
GTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCT < SRR4302542.2372414/94‑1 (MQ=60)
GTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCT < SRR4302542.3394943/94‑1 (MQ=60)
GTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCT < SRR4302542.7492249/94‑1 (MQ=60)
TTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTG > SRR4302542.524170/1‑94 (MQ=60)
ACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCG < SRR4302542.1523057/94‑1 (MQ=60)
ACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCG < SRR4302542.4412910/94‑1 (MQ=60)
ACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCG > SRR4302542.4753862/1‑94 (MQ=60)
ACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCG > SRR4302542.1000689/1‑94 (MQ=60)
ACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCG < SRR4302542.2483686/94‑1 (MQ=60)
ACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCG > SRR4302542.1682146/1‑94 (MQ=60)
ACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCG > SRR4302542.4180985/1‑94 (MQ=60)
CAGTGAGACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGT > SRR4302542.4745819/1‑94 (MQ=60)
AGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTT < SRR4302542.5410960/94‑1 (MQ=60)
AGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTT > SRR4302542.164712/1‑94 (MQ=60)
AGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTT < SRR4302542.5524824/94‑1 (MQ=60)
GTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTC < SRR4302542.3422808/94‑1 (MQ=60)
TGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCG > SRR4302542.6885895/1‑94 (MQ=60)
CACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGA > SRR4302542.5574875/1‑94 (MQ=60)
NNGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAG < SRR4302542.141884/94‑1 (MQ=60)
CGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGC < SRR4302542.5508995/94‑1 (MQ=60)
CGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGC > SRR4302542.6545367/1‑94 (MQ=60)
TGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGG > SRR4302542.1370463/1‑94 (MQ=60)
CGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGG < SRR4302542.5798240/94‑1 (MQ=60)
CGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGG < SRR4302542.7380745/94‑1 (MQ=60)
GCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGA > SRR4302542.3833282/1‑94 (MQ=60)
GCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGA > SRR4302542.267396/1‑94 (MQ=60)
CCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGAT < SRR4302542.2249552/94‑1 (MQ=60)
CGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATC < SRR4302542.4563375/94‑1 (MQ=60)
CGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATC > SRR4302542.264865/1‑94 (MQ=60)
GACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCT > SRR4302542.6041012/1‑94 (MQ=60)
GACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCT > SRR4302542.4971693/1‑94 (MQ=60)
ACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTG > SRR4302542.2560070/1‑94 (MQ=60)
TGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGAT > SRR4302542.1699833/1‑94 (MQ=60)
TGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGAT > SRR4302542.2876267/1‑94 (MQ=60)
TGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGAT < SRR4302542.230684/94‑1 (MQ=60)
TGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGAT > SRR4302542.6383504/1‑94 (MQ=60)
GCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATT < SRR4302542.7550385/94‑1 (MQ=60)
CATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTG > SRR4302542.1071638/1‑94 (MQ=60)
CATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTG < SRR4302542.6646874/94‑1 (MQ=60)
CATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTG > SRR4302542.2176191/1‑94 (MQ=60)
CATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTG < SRR4302542.4278785/94‑1 (MQ=60)
CATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTG < SRR4302542.4425187/94‑1 (MQ=60)
ATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGT > SRR4302542.43816/1‑94 (MQ=60)
ATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGT < SRR4302542.445946/94‑1 (MQ=60)
ATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGT > SRR4302542.4648690/1‑94 (MQ=60)
ATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGT > SRR4302542.3756877/1‑94 (MQ=60)
ATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGT > SRR4302542.3713954/1‑94 (MQ=60)
ATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGT > SRR4302542.3713953/1‑94 (MQ=60)
ATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGT < SRR4302542.4787824/94‑1 (MQ=60)
TCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTC < SRR4302542.7471395/94‑1 (MQ=60)
CCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCG > SRR4302542.4192055/1‑94 (MQ=60)
CCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCG < SRR4302542.4594092/94‑1 (MQ=60)
CCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCG > SRR4302542.6197907/1‑94 (MQ=60)
CGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGA > SRR4302542.8631/1‑94 (MQ=60)
GCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGAT > SRR4302542.5081532/1‑94 (MQ=60)
GCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGAT < SRR4302542.3860644/94‑1 (MQ=60)
GCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGAT < SRR4302542.6970453/94‑1 (MQ=60)
GCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGAT < SRR4302542.2767318/94‑1 (MQ=60)
CTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATA < SRR4302542.3572882/94‑1 (MQ=60)
CTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATA > SRR4302542.7258971/1‑94 (MQ=60)
CTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATA < SRR4302542.1346273/94‑1 (MQ=60)
TTTCCAGCAAAACCCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATAC < SRR4302542.2356682/94‑1 (MQ=60)
TTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATAC > SRR4302542.5097872/1‑94 (MQ=60)
TTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATAC < SRR4302542.3118748/94‑1 (MQ=60)
TCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCT < SRR4302542.2595654/94‑1 (MQ=60)
CAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA < SRR4302542.4448799/94‑1 (MQ=60)
CAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA < SRR4302542.6681534/94‑1 (MQ=60)
AGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑G > SRR4302542.791631/1‑94 (MQ=60)
AGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑G < SRR4302542.1936206/94‑1 (MQ=60)
AGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑G > SRR4302542.5601606/1‑94 (MQ=60)
GCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTTATTGTCGATACCTCA‑GA < SRR4302542.7454083/94‑1 (MQ=60)
CAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAA > SRR4302542.4866950/1‑94 (MQ=60)
CAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAA > SRR4302542.6546422/1‑94 (MQ=60)
AAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGACTCTGCGTTCACGAGCGGATCTCATTGTCGATACCTCACGAA > SRR4302542.5623355/1‑94 (MQ=60)
AAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAA > SRR4302542.5173890/1‑94 (MQ=60)
AAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAAT > SRR4302542.144732/1‑94 (MQ=60)
AAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAAT > SRR4302542.4138986/1‑94 (MQ=60)
AAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAAT < SRR4302542.2504069/94‑1 (MQ=60)
AAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAATG < SRR4302542.2875741/94‑1 (MQ=60)
AACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAATGT < SRR4302542.1732630/94‑1 (MQ=60)
AACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAATGT > SRR4302542.1350573/1‑94 (MQ=60)
CTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAATGTCCG > SRR4302542.5879488/1‑94 (MQ=60)
CTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAATGTCCG > SRR4302542.4972424/1‑94 (MQ=60)
CTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAATGTCCG > SRR4302542.855994/1‑94 (MQ=60)
CGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAATGTCCGTTCA < SRR4302542.1259499/94‑1 (MQ=60)
GCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAATGTCCGTTCAC < SRR4302542.4889348/94‑1 (MQ=60)
GCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAATGTCCGTTCAC < SRR4302542.700540/94‑1 (MQ=60)
GCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAATGTCCGTTCAC > SRR4302542.633565/1‑94 (MQ=60)
CTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAATGTCCGTTCACG < SRR4302542.268956/94‑1 (MQ=60)
CTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAATGTCCGTTCACG > SRR4302542.1067668/1‑94 (MQ=60)
CTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAATGTCCGTTCACG > SRR4302542.6679617/1‑94 (MQ=60)
GGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAATGTCCGTTCACGAG < SRR4302542.390675/94‑1 (MQ=60)
GGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAATGTCCGTTCACGAG < SRR4302542.1921376/94‑1 (MQ=60)
GGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCAGATCTGATTGTCGATACCTCA‑GAAATGTCCGTTCACGAG < SRR4302542.6954035/94‑1 (MQ=60)
GGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAATGTCCGTTCACGAGC > SRR4302542.1682754/1‑94 (MQ=60)
GAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAATGTCCGTTCACGAGCT < SRR4302542.4020411/94‑1 (MQ=60)
AAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAATGTCCGTTCACGAGCT < SRR4302542.5962106/94‑1 (MQ=60)
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TCCTGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCA‑GAAATGTCCGTTCACGAGCT > NC_000913/3345000‑3345186
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
