Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,464,165	T→C	E66E (GAA→GAG)	bfr ←	bacterioferrin

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,464,165	0	T	C	87.8%	771.1 / 90.0	305	E66E (GAA→GAG)	bfr	bacterioferrin
Reads supporting (aligned to +/- strand): ref base T (16/21); new base C (124/143); total (140/165)
Fisher's exact test for biased strand distribution p-value = 7.29e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.30e-01

Only 100 of 306 total aligned reads displayed.

CCATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGA  >  NC_000913/3464073‑3464255

ccATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCt                                                                                            <  1:7477312/93‑1 (MQ=255)

   tCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTcc                                                                                         >  2:804931/1‑93 (MQ=255)

   tCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTcc                                                                                         >  2:5286392/1‑93 (MQ=255)

    ccAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCa                                                                                        <  1:3937692/93‑1 (MQ=255)

       gCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGaa                                                                                     <  2:4199756/93‑1 (MQ=255)

       gCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGaa                                                                                     >  2:369450/1‑93 (MQ=255)

       gCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGaa                                                                                     <  1:522128/93‑1 (MQ=255)

        cTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGaaa                                                                                    >  1:1382097/1‑93 (MQ=255)

            aGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGa                                                                                <  1:5546493/93‑1 (MQ=255)

             gTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGaa                                                                               <  1:7297521/93‑1 (MQ=255)

              tGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAAt                                                                              >  1:2383166/1‑93 (MQ=255)

               gCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATg                                                                             <  1:1566051/93‑1 (MQ=255)

                ccAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATgc                                                                            <  1:1173456/93‑1 (MQ=255)

                ccAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATgc                                                                            <  1:4899934/93‑1 (MQ=255)

                  aGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATgcgc                                                                          <  2:5775518/93‑1 (MQ=255)

                   gATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCt                                                                         <  2:3511796/93‑1 (MQ=255)

                     tCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCa                                                                       >  2:7418576/1‑93 (MQ=255)

                      cAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCaa                                                                      <  2:5314633/93‑1 (MQ=255)

                       aGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAat                                                                     <  2:4292821/93‑1 (MQ=255)

                        gAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAata                                                                    <  2:2859003/93‑1 (MQ=255)

                         aaCGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAatat                                                                   >  2:1443022/1‑93 (MQ=255)

                          aCGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAAtata                                                                  >  2:4353934/1‑93 (MQ=255)

                           cGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATaa                                                                 <  2:2707282/93‑1 (MQ=255)

                           cGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATaa                                                                 >  1:7404304/1‑93 (MQ=255)

                             cagcaTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACg                                                               >  2:1351698/1‑93 (MQ=255)

                              agcaTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGa                                                              <  1:6744584/93‑1 (MQ=255)

                               gcaTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGAt                                                             <  2:2941053/93‑1 (MQ=255)

                               gcaTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGAt                                                             >  1:27447/1‑93 (MQ=255)

                                caTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATc                                                            <  1:5141834/93‑1 (MQ=255)

                                caTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATc                                                            >  2:7295881/1‑93 (MQ=255)

                                caTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATc                                                            <  2:1033929/93‑1 (MQ=255)

                                  tttCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCgg                                                          >  2:1522222/1‑93 (MQ=255)

                                  tttCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCgg                                                          >  1:6512571/1‑93 (MQ=255)

                                   ttCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGc                                                         <  2:6525141/93‑1 (MQ=255)

                                    tCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCg                                                        >  1:3264916/1‑93 (MQ=255)

                                     ccTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCgt                                                       >  1:2237843/1‑93 (MQ=255)

                                     ccTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCgt                                                       >  2:6712117/1‑93 (MQ=255)

                                      cTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCgtg                                                      >  1:5433990/1‑93 (MQ=255)

                                       tCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCgtgt                                                     <  2:4036192/93‑1 (MQ=255)

                                       tCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCgtgt                                                     >  2:5142973/1‑93 (MQ=255)

                                        cAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGtt                                                    <  1:3024297/93‑1 (MQ=255)

                                          aCATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtc                                                  >  1:4319149/1‑93 (MQ=255)

                                           cATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtca                                                 >  1:4541269/1‑93 (MQ=255)

                                           cATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtca                                                 <  1:1874262/93‑1 (MQ=255)

                                           cATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtca                                                 <  1:342206/93‑1 (MQ=255)

                                           cATCTTCACCAATGTTCAGTTTGCCCAGGTCCTATAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtca                                                 <  2:6895975/93‑1 (MQ=255)

                                             tCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtcatc                                               >  2:2100209/1‑93 (MQ=255)

                                              cTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtcatct                                              <  1:6080897/93‑1 (MQ=255)

                                                tCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtcatctca                                            <  2:663653/93‑1 (MQ=255)

                                                tCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtcatctca                                            <  2:3163811/93‑1 (MQ=255)

                                                   ccAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCtcatca                                         >  2:5702071/1‑93 (MQ=255)

                                                    cAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCaa                                        >  1:176187/1‑93 (MQ=255)

                                                     aaTGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAAt                                       >  2:1392902/1‑93 (MQ=255)

                                                      aTGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATg                                      >  1:403521/1‑93 (MQ=255)

                                                      aTGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATg                                      <  1:5814547/93‑1 (MQ=255)

                                                      aTGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATg                                      >  1:4828186/1‑93 (MQ=255)

                                                      aTGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATg                                      <  1:952622/93‑1 (MQ=255)

                                                       tGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATgg                                     >  1:7205022/1‑93 (MQ=255)

                                                        gTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGa                                    >  1:81064/1‑93 (MQ=255)

                                                          tCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGAtt                                  >  2:5440879/1‑93 (MQ=255)

                                                          tCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGAtt                                  <  2:328647/93‑1 (MQ=255)

                                                            aGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCa                                <  2:7070700/93‑1 (MQ=255)

                                                            aGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCa                                <  2:2537020/93‑1 (MQ=255)

                                                            aGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCa                                >  2:6140370/1‑93 (MQ=255)

                                                              tttGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATg                              >  2:1804797/1‑93 (MQ=255)

                                                                tGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGAt                            <  2:1911695/93‑1 (MQ=255)

                                                                    cAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTc                        >  1:335880/1‑93 (MQ=255)

                                                                     aGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTcc                       >  2:3096951/1‑93 (MQ=255)

                                                                     aGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTcc                       >  2:1163600/1‑93 (MQ=255)

                                                                      ggTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCca                      >  1:6585232/1‑93 (MQ=255)

                                                                      ggTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCca                      <  2:6348471/93‑1 (MQ=255)

                                                                       gTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCcac                     >  2:6045722/1‑93 (MQ=255)

                                                                       gTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCcac                     <  1:1814676/93‑1 (MQ=255)

                                                                        tCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCcaca                    <  1:6325393/93‑1 (MQ=255)

                                                                           tGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCAcatca                 <  1:6846247/93‑1 (MQ=255)

                                                                            gTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCAcatcat                >  1:6673204/1‑93 (MQ=255)

                                                                            gTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCAcatcat                <  2:4668735/93‑1 (MQ=255)

                                                                            gTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCAcatcat                >  1:5100792/1‑93 (MQ=255)

                                                                            gTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCAcatcat                >  1:711642/1‑93 (MQ=255)

                                                                            gTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCAcatcat                >  1:3239708/1‑93 (MQ=255)

                                                                             tAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCAtt               <  1:3685572/93‑1 (MQ=255)

                                                                                gTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTgag            >  1:7052574/1‑93 (MQ=255)

                                                                                 tttGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTgaga           <  1:1623978/93‑1 (MQ=255)

                                                                                  ttGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGAc          <  1:2517042/93‑1 (MQ=255)

                                                                                    ggAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGt        <  2:4539678/93‑1 (MQ=255)

                                                                                    ggAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGt        <  2:3430396/93‑1 (MQ=255)

                                                                                     gAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGtt       <  1:6781917/93‑1 (MQ=255)

                                                                                     gAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGtt       >  2:6213519/1‑93 (MQ=255)

                                                                                      aaGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGttt      <  1:4650980/93‑1 (MQ=255)

                                                                                      aaGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGttt      >  2:4827481/1‑93 (MQ=255)

                                                                                      aaGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGttt      <  1:4112268/93‑1 (MQ=255)

                                                                                       aGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTg     <  2:3817072/93‑1 (MQ=255)

                                                                                        gACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTga    >  1:2068452/1‑93 (MQ=255)

                                                                                        gACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTga    >  2:2387181/1‑93 (MQ=255)

                                                                                        gACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTga    <  1:6363209/93‑1 (MQ=255)

                                                                                        gACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTga    <  2:5916503/93‑1 (MQ=255)

                                                                                        gACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTga    >  2:3955100/1‑93 (MQ=255)

                                                                                        gACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTga    >  1:4220616/1‑93 (MQ=255)

                                                                                         aCCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTgag   >  2:5235194/1‑93 (MQ=255)

                                                                                          ccTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTgaga  <  1:5006042/93‑1 (MQ=255)

CCATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGA  >  NC_000913/3464073‑3464255

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CCATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCC  >  NC_000913/3464073‑3464258

CCATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTT                                                                                              <  SRR4302542.7550595/94‑1 (MQ=60)

CCATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCT                                                                                              <  SRR4302542.234900/94‑1 (MQ=60)

CCATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCT                                                                                              >  SRR4302542.2573088/1‑94 (MQ=60)

CCATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCT                                                                                              >  SRR4302542.3064084/1‑94 (MQ=60)

CCATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCT                                                                                              <  SRR4302542.1686125/94‑1 (MQ=60)

CCATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCT                                                                                              >  SRR4302542.6371217/1‑94 (MQ=60)

 CATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTC                                                                                             >  SRR4302542.1646110/1‑94 (MQ=60)

 CATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTC                                                                                             >  SRR4302542.3284207/1‑94 (MQ=60)

 CATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTC                                                                                             >  SRR4302542.5778781/1‑94 (MQ=60)

 CATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTC                                                                                             <  SRR4302542.2776670/94‑1 (MQ=60)

  ATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCC                                                                                            <  SRR4302542.162908/94‑1 (MQ=60)

  ATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCC                                                                                            <  SRR4302542.261554/94‑1 (MQ=60)

  ATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCC                                                                                            >  SRR4302542.6400981/1‑94 (MQ=60)

  ATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCC                                                                                            >  SRR4302542.3575207/1‑94 (MQ=60)

   TCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCA                                                                                           <  SRR4302542.1566467/94‑1 (MQ=60)

   TCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCA                                                                                           <  SRR4302542.6619303/94‑1 (MQ=60)

    CCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAG                                                                                          <  SRR4302542.7569094/94‑1 (MQ=60)

    CCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAG                                                                                          <  SRR4302542.459039/94‑1 (MQ=60)

    CCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAG                                                                                          <  SRR4302542.3976586/94‑1 (MQ=60)

      AGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAA                                                                                        >  SRR4302542.6694439/1‑94 (MQ=60)

      AGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAA                                                                                        >  SRR4302542.2716644/1‑94 (MQ=60)

       GCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAA                                                                                       >  SRR4302542.1394038/1‑94 (MQ=60)

       GCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAA                                                                                       <  SRR4302542.526647/94‑1 (MQ=60)

        CTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAA                                                                                      >  SRR4302542.3354692/1‑94 (MQ=60)

          CAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAG                                                                                    <  SRR4302542.5263196/94‑1 (MQ=60)

            AGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAA                                                                                  <  SRR4302542.2293091/94‑1 (MQ=60)

            AGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAA                                                                                  <  SRR4302542.5600391/94‑1 (MQ=60)

             GTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAAT                                                                                 >  SRR4302542.5534535/1‑94 (MQ=60)

             GTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAAT                                                                                 <  SRR4302542.7369033/94‑1 (MQ=60)

             CTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAAT                                                                                 >  SRR4302542.2405096/1‑94 (MQ=60)

               GCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGC                                                                               <  SRR4302542.1579576/94‑1 (MQ=60)

                CCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCG                                                                              <  SRR4302542.4947564/94‑1 (MQ=60)

                CCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCG                                                                              <  SRR4302542.1183597/94‑1 (MQ=60)

                 CAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGC                                                                             <  SRR4302542.7020615/94‑1 (MQ=60)

                  AGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCT                                                                            <  SRR4302542.6563059/94‑1 (MQ=60)

                  AGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCT                                                                            >  SRR4302542.3535046/1‑94 (MQ=60)

                    ATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCA                                                                          <  SRR4302542.782514/94‑1 (MQ=60)

                    ATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCA                                                                          <  SRR4302542.5616222/94‑1 (MQ=60)

                      CAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAAT                                                                        >  SRR4302542.6719967/1‑94 (MQ=60)

                      CAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAAT                                                                        <  SRR4302542.2017202/94‑1 (MQ=60)

                          ACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAA                                                                    >  SRR4302542.7476766/1‑94 (MQ=60)

                            GCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACG                                                                  <  SRR4302542.213634/94‑1 (MQ=60)

                              AGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGAT                                                                <  SRR4302542.6810955/94‑1 (MQ=60)

                              AGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGAT                                                                <  SRR4302542.6810954/94‑1 (MQ=60)

                              AGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGAT                                                                >  SRR4302542.27685/1‑94 (MQ=60)

                              AGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTAAATATAACGAT                                                                <  SRR4302542.6613041/94‑1 (MQ=60)

                                CATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCG                                                              <  SRR4302542.4138092/94‑1 (MQ=60)

                                CATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCG                                                              <  SRR4302542.5191817/94‑1 (MQ=60)

                                 ATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGG                                                             >  SRR4302542.4906235/1‑94 (MQ=60)

                                 ATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGG                                                             >  SRR4302542.6576757/1‑94 (MQ=60)

                                 ATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGG                                                             >  SRR4302542.7496420/1‑94 (MQ=60)

                                 ATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGG                                                             >  SRR4302542.182982/1‑94 (MQ=60)

                                  TTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGC                                                            <  SRR4302542.3468007/94‑1 (MQ=60)

                                   TTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCG                                                           >  SRR4302542.3295741/1‑94 (MQ=60)

                                    TCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGT                                                          >  SRR4302542.2257088/1‑94 (MQ=60)

                                    TCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGT                                                          <  SRR4302542.5239155/94‑1 (MQ=60)

                                     CCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTG                                                         <  SRR4302542.4395632/94‑1 (MQ=60)

                                     CCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTG                                                         >  SRR4302542.5486788/1‑94 (MQ=60)

                                     CCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTG                                                         >  SRR4302542.1877834/1‑94 (MQ=60)

                                     CCACAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTG                                                         <  SRR4302542.4296154/94‑1 (MQ=60)

                                      CTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGT                                                        >  SRR4302542.2938085/1‑94 (MQ=60)

                                      CTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGT                                                        >  SRR4302542.1252068/1‑94 (MQ=60)

                                       TCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTT                                                       <  SRR4302542.1905776/94‑1 (MQ=60)

                                        CAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTT                                                      <  SRR4302542.5558871/94‑1 (MQ=60)

                                        CAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTT                                                      >  SRR4302542.5290175/1‑94 (MQ=60)

                                        CAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTT                                                      <  SRR4302542.3053170/94‑1 (MQ=60)

                                         AACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTC                                                     >  SRR4302542.6371146/1‑94 (MQ=60)

                                         AACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTC                                                     >  SRR4302542.3240622/1‑94 (MQ=60)

                                         AACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTC                                                     >  SRR4302542.4666797/1‑94 (MQ=60)

                                         AACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTC                                                     >  SRR4302542.4361618/1‑94 (MQ=60)

                                          ACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCA                                                    >  SRR4302542.4585725/1‑94 (MQ=60)

                                          ACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCA                                                    <  SRR4302542.3385148/94‑1 (MQ=60)

                                          ACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCA                                                    <  SRR4302542.2402625/94‑1 (MQ=60)

                                           CATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCAT                                                   <  SRR4302542.1890477/94‑1 (MQ=60)

                                           CATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCAT                                                   <  SRR4302542.345171/94‑1 (MQ=60)

                                            ATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATC                                                  >  SRR4302542.6909204/1‑94 (MQ=60)

                                             TCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCT                                                 >  SRR4302542.5094933/1‑94 (MQ=60)

                                             TCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCT                                                 <  SRR4302542.7277677/94‑1 (MQ=60)

                                             TCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCT                                                 >  SRR4302542.7441601/1‑94 (MQ=60)

                                              CTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTC                                                <  SRR4302542.6139773/94‑1 (MQ=60)

                                              CTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTC                                                <  SRR4302542.5889890/94‑1 (MQ=60)

                                              CTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTC                                                <  SRR4302542.6822140/94‑1 (MQ=60)

                                              CTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTC                                                >  SRR4302542.405919/1‑94 (MQ=60)

                                              CTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTC                                                >  SRR4302542.5150651/1‑94 (MQ=60)

                                                 CACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATC                                             >  SRR4302542.7164813/1‑94 (MQ=60)

                                                  ACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCA                                            >  SRR4302542.639668/1‑94 (MQ=60)

                                                  ACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCA                                            <  SRR4302542.1611314/94‑1 (MQ=60)

                                                  ACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCA                                            <  SRR4302542.1888704/94‑1 (MQ=60)

                                                   CCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTTGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAA                                           >  SRR4302542.4128937/1‑94 (MQ=60)

                                                   CCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAA                                           >  SRR4302542.177680/1‑94 (MQ=60)

                                                    CAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAAT                                          >  SRR4302542.3867177/1‑94 (MQ=60)

                                                    CAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAAT                                          >  SRR4302542.2422950/1‑94 (MQ=60)

                                                    CAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAAT                                          >  SRR4302542.6775500/1‑94 (MQ=60)

                                                    CAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAAT                                          >  SRR4302542.3438659/1‑94 (MQ=60)

                                                    CAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAAT                                          >  SRR4302542.4333971/1‑94 (MQ=60)

                                                    CAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAAT                                          <  SRR4302542.6074766/94‑1 (MQ=60)

                                                     AATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATG                                         >  SRR4302542.407006/1‑94 (MQ=60)

                                                     AATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATG                                         >  SRR4302542.4875230/1‑94 (MQ=60)

                                                      ATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGG                                        >  SRR4302542.6797873/1‑94 (MQ=60)

                                                      ATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGG                                        <  SRR4302542.960798/94‑1 (MQ=60)

                                                      ATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGG                                        <  SRR4302542.5870971/94‑1 (MQ=60)

                                                      ATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGG                                        >  SRR4302542.7275732/1‑94 (MQ=60)

                                                       TGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGA                                       >  SRR4302542.81742/1‑94 (MQ=60)

                                                        GTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTTATCTCATCAATGGAT                                      >  SRR4302542.6559616/1‑94 (MQ=60)

                                                         TTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATT                                     >  SRR4302542.5388145/1‑94 (MQ=60)

                                                         TTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATT                                     >  SRR4302542.7222776/1‑94 (MQ=60)

                                                          TCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTC                                    <  SRR4302542.7469386/94‑1 (MQ=60)

                                                          TCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTC                                    <  SRR4302542.4738937/94‑1 (MQ=60)

                                                            AGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCAT                                  <  SRR4302542.5071033/94‑1 (MQ=60)

                                                             GTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATG                                 <  SRR4302542.7485979/94‑1 (MQ=60)

                                                             GTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATG                                 <  SRR4302542.4722911/94‑1 (MQ=60)

                                                               TTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGAT                               <  SRR4302542.6986026/94‑1 (MQ=60)

                                                                   CCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTC                           >  SRR4302542.338795/1‑94 (MQ=60)

                                                                   CCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTC                           >  SRR4302542.4185917/1‑94 (MQ=60)

                                                                    CAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCC                          <  SRR4302542.1234397/94‑1 (MQ=60)

                                                                    CAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCC                          >  SRR4302542.854996/1‑94 (MQ=60)

                                                                    CAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCC                          >  SRR4302542.3764694/1‑94 (MQ=60)

                                                                     AGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCA                         >  SRR4302542.6650108/1‑94 (MQ=60)

                                                                       GTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACA                       <  SRR4302542.893764/94‑1 (MQ=60)

                                                                       GTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACA                       <  SRR4302542.1830393/94‑1 (MQ=60)

                                                                       GTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACA                       >  SRR4302542.720493/1‑94 (MQ=60)

                                                                       GTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACA                       >  SRR4302542.3287508/1‑94 (MQ=60)

                                                                        TCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACAT                      <  SRR4302542.6387724/94‑1 (MQ=60)

                                                                        TCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACAT                      <  SRR4302542.7325840/94‑1 (MQ=60)

                                                                        TCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACAT                      <  SRR4302542.2427825/94‑1 (MQ=60)

                                                                        TCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACAT                      <  SRR4302542.5918113/94‑1 (MQ=60)

                                                                          CTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCA                    >  SRR4302542.5052567/1‑94 (MQ=60)

                                                                           TGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCAT                   >  SRR4302542.717784/1‑94 (MQ=60)

                                                                           TGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCAT                   >  SRR4302542.144590/1‑94 (MQ=60)

                                                                           TGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCAT                   <  SRR4302542.6913493/94‑1 (MQ=60)

                                                                           TGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCAT                   >  SRR4302542.6738946/1‑94 (MQ=60)

                                                                           TGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCAT                   >  SRR4302542.5150350/1‑94 (MQ=60)

                                                                           TGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCAT                   >  SRR4302542.3270334/1‑94 (MQ=60)

                                                                            GTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATT                  <  SRR4302542.4938615/94‑1 (MQ=60)

                                                                             TAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTG                 <  SRR4302542.3721867/94‑1 (MQ=60)

                                                                               AGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAG               <  SRR4302542.3447153/94‑1 (MQ=60)

                                                                               AGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAG               >  SRR4302542.7121812/1‑94 (MQ=60)

                                                                                GTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAACGGATTCATGATACTCCACATCATTGAGA              <  SRR4302542.2839539/94‑1 (MQ=60)

                                                                                 TTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGAC             <  SRR4302542.1638000/94‑1 (MQ=60)

                                                                                  TTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACG            <  SRR4302542.7147638/94‑1 (MQ=60)

                                                                                  TTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACG            >  SRR4302542.1775787/1‑94 (MQ=60)

                                                                                  TTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACG            <  SRR4302542.2541460/94‑1 (MQ=60)

                                                                                    GGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTT          <  SRR4302542.5046116/94‑1 (MQ=60)

                                                                                    GGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTT          <  SRR4302542.6233599/94‑1 (MQ=60)

                                                                                     GAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTT         <  SRR4302542.6848628/94‑1 (MQ=60)

                                                                                      AAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTG        <  SRR4302542.4696449/94‑1 (MQ=60)

                                                                                      AAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTG        <  SRR4302542.4152796/94‑1 (MQ=60)

                                                                                       AGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGA       >  SRR4302542.2086335/1‑94 (MQ=60)

                                                                                       AGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGA       >  SRR4302542.4262206/1‑94 (MQ=60)

                                                                                       AGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGA       <  SRR4302542.179983/94‑1 (MQ=60)

                                                                                       AGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGA       <  SRR4302542.95898/94‑1 (MQ=60)

                                                                                       AGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGA       <  SRR4302542.4459123/94‑1 (MQ=60)

                                                                                       AGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGA       <  SRR4302542.5182300/94‑1 (MQ=60)

                                                                                       AGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGA       <  SRR4302542.6859124/94‑1 (MQ=60)

                                                                                       AGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGA       >  SRR4302542.315881/1‑94 (MQ=60)

                                                                                        GACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAG      >  SRR4302542.2122459/1‑94 (MQ=60)

                                                                                        GACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAG      <  SRR4302542.4224109/94‑1 (MQ=60)

                                                                                        GACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAG      <  SRR4302542.6425873/94‑1 (MQ=60)

                                                                                        GACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAG      <  SRR4302542.4069290/94‑1 (MQ=60)

                                                                                         ACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGA     >  SRR4302542.2150801/1‑94 (MQ=60)

                                                                                         ACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGA     >  SRR4302542.406682/1‑94 (MQ=60)

                                                                                          CCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGAC    <  SRR4302542.5054664/94‑1 (MQ=60)

                                                                                          CCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGAC    <  SRR4302542.4400719/94‑1 (MQ=60)

                                                                                           CCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACC   >  SRR4302542.2199928/1‑94 (MQ=60)

                                                                                            CTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCC  >  SRR4302542.2142620/1‑94 (MQ=60)

CCATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCC  >  NC_000913/3464073‑3464258

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`