Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,472,072 T→C T40A (ACC→GCC)  rpsL ← 30S ribosomal subunit protein S12

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,472,0720TC87.1% 771.3 / 97.5 310T40A (ACC→GCC) rpsL30S ribosomal subunit protein S12
Reads supporting (aligned to +/- strand):  ref base T (20/20);  new base C (144/126);  total (164/146)
Fisher's exact test for biased strand distribution p-value = 7.36e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.59e-01

Only 100 of 330 total aligned reads displayed.

TTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTG  >  NC_000913/3471980‑3472163
                                                                                            |                                                                                            
   accaccGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGgcagt                                                                                           <  1:4334635/93‑1 (MQ=255)
    ccaccGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGgcagta                                                                                          <  1:4743467/93‑1 (MQ=255)
    ccaccGATGCAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGgtagta                                                                                          <  1:1598738/93‑1 (MQ=255)
     caccGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGtat                                                                                         <  1:6379442/93‑1 (MQ=255)
      accGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGtata                                                                                        >  1:1647098/1‑93 (MQ=255)
         gATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATa‑c                                                                                    >  2:1628007/1‑93 (MQ=255)
         gATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATa‑c                                                                                    <  1:6984597/93‑1 (MQ=255)
         gATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATa‑c                                                                                    <  1:7276311/93‑1 (MQ=255)
          aTGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATa‑ca                                                                                   <  2:1241222/93‑1 (MQ=255)
             tAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGa                                                                                <  1:4867591/93‑1 (MQ=255)
             tAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGa                                                                                <  2:4757865/93‑1 (MQ=255)
             caGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATA‑CACGa                                                                                <  1:1031368/92‑1 (MQ=255)
              aGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATA‑CACGAg                                                                               <  2:779940/93‑1 (MQ=255)
              aGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAg                                                                               <  1:1900357/93‑1 (MQ=255)
               ggAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGt                                                                              <  1:6040938/93‑1 (MQ=255)
                gAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTa                                                                             >  2:2802418/1‑93 (MQ=255)
                gAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTa                                                                             >  2:4231878/1‑93 (MQ=255)
                 aaGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTA‑ATATCACGAGTat                                                                            >  1:7530095/1‑92 (MQ=255)
                  aGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACa                                                                           <  1:3167516/93‑1 (MQ=255)
                   gTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACAt                                                                          <  2:6389660/93‑1 (MQ=255)
                    tCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATa                                                                         <  2:5312217/93‑1 (MQ=255)
                    tCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATa                                                                         <  2:5940508/93‑1 (MQ=255)
                      aCTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACg                                                                       >  2:6723281/1‑93 (MQ=255)
                       cTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGc                                                                      >  2:6257273/1‑93 (MQ=255)
                        ttCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCGGTATATA‑CACGAGTACATACGcc                                                                     >  2:4734589/1‑93 (MQ=255)
                         tCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCa                                                                    <  1:2324073/93‑1 (MQ=255)
                           gAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACg                                                                  >  2:4635398/1‑93 (MQ=255)
                            aaaCCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATA‑CACGAGTACATACGCCACGt                                                                 >  1:6454376/1‑93 (MQ=255)
                            aaaCCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGt                                                                 <  2:2748448/93‑1 (MQ=255)
                            aaaCCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGt                                                                 >  2:3520364/1‑93 (MQ=255)
                             aaCCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGtt                                                                >  1:4113313/1‑93 (MQ=255)
                             aaCCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGtt                                                                >  2:1794251/1‑93 (MQ=255)
                             aaCCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGtt                                                                >  2:2094030/1‑93 (MQ=255)
                              aCCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGttt                                                               >  1:2621818/1‑93 (MQ=255)
                                 gTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTg                                                            >  1:3682429/1‑93 (MQ=255)
                                 gTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTg                                                            >  2:7215866/1‑93 (MQ=255)
                                 gTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTg                                                            >  1:1404343/1‑93 (MQ=255)
                                  ttAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGc                                                           >  2:922572/1‑93 (MQ=255)
                                  ttAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGc                                                           <  1:422228/93‑1 (MQ=255)
                                    aGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCgg                                                         <  2:1136630/93‑1 (MQ=255)
                                     gTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCggg                                                        <  2:3065922/93‑1 (MQ=255)
                                      tCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGc                                                       >  2:6533392/1‑93 (MQ=255)
                                      tCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGc                                                       >  1:1942502/1‑93 (MQ=255)
                                       cAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCa                                                      >  2:2025711/1‑93 (MQ=255)
                                       cAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCa                                                      <  1:1235636/93‑1 (MQ=255)
                                        aGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCAt                                                     >  2:1934953/1‑93 (MQ=255)
                                         gACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATg                                                    >  1:267207/1‑93 (MQ=255)
                                         gACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATg                                                    >  1:7115973/1‑93 (MQ=255)
                                         gACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATg                                                    >  1:3118167/1‑93 (MQ=255)
                                             aaCACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTc                                                <  2:3743394/93‑1 (MQ=255)
                                             aaCACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTc                                                <  2:1759817/93‑1 (MQ=255)
                                             aaCACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTc                                                >  2:3826382/1‑93 (MQ=255)
                                              acacGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTcc                                               >  2:1664309/1‑93 (MQ=255)
                                              acacGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTcc                                               >  1:6888123/1‑93 (MQ=255)
                                              acacGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTcc                                               >  1:2441843/1‑93 (MQ=255)
                                               cacGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCa                                              >  1:1532567/1‑93 (MQ=255)
                                                  ggCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAgcg                                           >  2:5128380/1‑93 (MQ=255)
                                                  ggCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAgcg                                           >  1:4540927/1‑93 (MQ=255)
                                                     aTACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAg                                        <  2:1595718/93‑1 (MQ=255)
                                                     aTACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAg                                        <  1:2825347/93‑1 (MQ=255)
                                                      tACTTTACGCAGTGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAgg                                       >  2:5437997/1‑93 (MQ=255)
                                                      tACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAgg                                       >  1:2404725/1‑93 (MQ=255)
                                                       aCTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGc                                      >  2:2914674/1‑93 (MQ=255)
                                                       aCTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGc                                      >  1:6132800/1‑93 (MQ=255)
                                                       aCTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGc                                      <  2:5573467/93‑1 (MQ=255)
                                                         tttACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCAc                                    >  2:5723169/1‑93 (MQ=255)
                                                         tttACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCAc                                    <  2:5622302/93‑1 (MQ=255)
                                                          ttACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACg                                   >  1:5514407/1‑93 (MQ=255)
                                                           tACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGt                                  <  1:3844221/93‑1 (MQ=255)
                                                              gCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGc                               <  1:5111094/93‑1 (MQ=255)
                                                              gCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGc                               >  1:7370759/1‑93 (MQ=255)
                                                                 gcgcGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCttt                            <  2:4008834/93‑1 (MQ=255)
                                                                   gcgGAGTTCGGTTTTTTAGGAGTGGTAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTc                          <  1:3608530/93‑1 (MQ=255)
                                                                   gcgGAGTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTc                          <  2:6896783/93‑1 (MQ=255)
                                                                    cgGAGTTCGGTTTTTTAGGAGTGGTAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCg                         >  2:1010525/1‑93 (MQ=255)
                                                                      gAGTTCGGTTTTTTAGGAGTGGTAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCa                       >  1:566640/1‑93 (MQ=255)
                                                                        gTTCGGTTTTTTAGGAGTGGTAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAAc                     >  2:3596837/1‑93 (MQ=255)
                                                                        gTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAAc                     <  2:1475753/93‑1 (MQ=255)
                                                                        gTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAAc                     <  1:2537919/93‑1 (MQ=255)
                                                                        gTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAAc                     >  2:7365398/1‑93 (MQ=255)
                                                                        gTTCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAAc                     <  2:5840776/93‑1 (MQ=255)
                                                                         ttCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCTGACATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACt                    >  2:6617236/1‑93 (MQ=255)
                                                                         ttCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACt                    >  1:2156808/1‑93 (MQ=255)
                                                                         ttCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACt                    >  2:7093374/1‑93 (MQ=255)
                                                                         ttCGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACt                    >  1:2931320/1‑93 (MQ=255)
                                                                          tCGGTTTTTTAGGACTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACtt                   >  2:6438758/1‑93 (MQ=255)
                                                                           cGGTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACttt                  >  1:5406855/1‑93 (MQ=255)
                                                                            ggTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTg                 >  2:7068340/1‑93 (MQ=255)
                                                                            ggTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTg                 >  2:1427972/1‑93 (MQ=255)
                                                                             gTTTTTTAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGc                >  2:2445238/1‑93 (MQ=255)
                                                                                ttttAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAg             <  1:6681769/93‑1 (MQ=255)
                                                                                 tttAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGc            <  1:6347635/93‑1 (MQ=255)
                                                                                  ttAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCa           <  2:4966896/93‑1 (MQ=255)
                                                                                  ttAGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCa           >  1:6260033/1‑93 (MQ=255)
                                                                                   tAGGAGTGGTAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCAc          <  2:6028610/93‑1 (MQ=255)
                                                                                    aGGAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACg         <  2:2257788/93‑1 (MQ=255)
                                                                                      gAGTGGTAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTg       <  1:3434463/93‑1 (MQ=255)
                                                                                      gAGTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTg       <  1:1172098/93‑1 (MQ=255)
                                                                                        gTGGCAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGt     <  2:3235229/93‑1 (MQ=255)
                                                                                           gtagtaTATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTg  >  2:4493045/1‑93 (MQ=255)
                                                                                            |                                                                                            
TTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATA‑CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTG  >  NC_000913/3471980‑3472163

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCG  >  NC_000913/3471979‑3472165
                                                                                             |                                                                                             
CTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGC                                                                                               >  SRR4302542.498617/1‑94 (MQ=60)
CTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGC                                                                                               >  SRR4302542.5081062/1‑94 (MQ=60)
CTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGC                                                                                               <  SRR4302542.6875029/94‑1 (MQ=60)
 TTCACCACCGATGCAGGTAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTA                                                                                              <  SRR4302542.3857867/94‑1 (MQ=60)
  TCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAG                                                                                             <  SRR4302542.736611/94‑1 (MQ=60)
    ACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTA                                                                                           <  SRR4302542.4377236/94‑1 (MQ=60)
    ACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGNA                                                                                           >  SRR4302542.3098738/1‑94 (MQ=60)
    ACCACCGATGCAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTA                                                                                           >  SRR4302542.2821982/1‑94 (MQ=60)
    ACCACCGATGCAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTA                                                                                           >  SRR4302542.6553495/1‑94 (MQ=60)
     CCACCGATGTAGGAAGTCACTTCGAAACTGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTAT                                                                                          <  SRR4302542.2855803/94‑1 (MQ=60)
     CCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTAT                                                                                          <  SRR4302542.2475532/94‑1 (MQ=60)
     CCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTAT                                                                                          <  SRR4302542.4789706/94‑1 (MQ=60)
     CCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTAT                                                                                          >  SRR4302542.6080547/1‑94 (MQ=60)
     CCACCGATGCAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTAT                                                                                          <  SRR4302542.1612545/94‑1 (MQ=60)
     CCACCGATGCAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTAT                                                                                          >  SRR4302542.4306886/1‑94 (MQ=60)
      CACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATA                                                                                         >  SRR4302542.1522714/1‑94 (MQ=60)
      CACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATA                                                                                         <  SRR4302542.6442251/94‑1 (MQ=60)
      CACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATA                                                                                         >  SRR4302542.1661338/1‑94 (MQ=60)
        CCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATA                                                                                       >  SRR4302542.2914459/1‑94 (MQ=60)
         CGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATAC                                                                                      >  SRR4302542.6633023/1‑94 (MQ=60)
          GATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACA                                                                                     <  SRR4302542.7347675/94‑1 (MQ=60)
          GATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACA                                                                                     <  SRR4302542.7053199/94‑1 (MQ=60)
           ATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACAC                                                                                    <  SRR4302542.4534544/94‑1 (MQ=60)
           ATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACAC                                                                                    <  SRR4302542.3510354/94‑1 (MQ=60)
            TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACG                                                                                   >  SRR4302542.5513893/1‑94 (MQ=60)
              TAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAG                                                                                 >  SRR4302542.2581476/1‑94 (MQ=60)
              TAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAG                                                                                 <  SRR4302542.4914980/94‑1 (MQ=60)
              CAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAG                                                                                 >  SRR4302542.292533/1‑94 (MQ=60)
              CAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAG                                                                                 <  SRR4302542.1040247/94‑1 (MQ=60)
               AGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGT                                                                                <  SRR4302542.909585/94‑1 (MQ=60)
               AGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGT                                                                                <  SRR4302542.5165975/94‑1 (MQ=60)
               AGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGT                                                                                >  SRR4302542.6138446/1‑94 (MQ=60)
               AGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGT                                                                                <  SRR4302542.1916789/94‑1 (MQ=60)
                GGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTA                                                                               <  SRR4302542.6099417/94‑1 (MQ=60)
                 GAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTAC                                                                              <  SRR4302542.7004488/94‑1 (MQ=60)
                 GAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTAC                                                                              >  SRR4302542.4239434/1‑94 (MQ=60)
                  AAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACA                                                                             >  SRR4302542.6473843/1‑94 (MQ=60)
                  AAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACA                                                                             <  SRR4302542.5694682/94‑1 (MQ=60)
                  AAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACA                                                                             <  SRR4302542.6325886/94‑1 (MQ=60)
                   AGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACAT                                                                            <  SRR4302542.3197567/94‑1 (MQ=60)
                   AGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACAT                                                                            <  SRR4302542.5002384/94‑1 (MQ=60)
                    GTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATA                                                                           >  SRR4302542.970807/1‑94 (MQ=60)
                    GTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATA                                                                           <  SRR4302542.1832817/94‑1 (MQ=60)
                     TCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATAG                                                                          <  SRR4302542.4867477/94‑1 (MQ=60)
                     TCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATAC                                                                          <  SRR4302542.2451014/94‑1 (MQ=60)
                     TCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATAC                                                                          <  SRR4302542.7385428/94‑1 (MQ=60)
                     TCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATAC                                                                          <  SRR4302542.6367559/94‑1 (MQ=60)
                     TCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATAC                                                                          <  SRR4302542.5624395/94‑1 (MQ=60)
                      CACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACG                                                                         >  SRR4302542.2533317/1‑94 (MQ=60)
                      CACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACG                                                                         <  SRR4302542.2267482/94‑1 (MQ=60)
                      CACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACG                                                                         >  SRR4302542.730777/1‑94 (MQ=60)
                        CTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCC                                                                       >  SRR4302542.2440866/1‑94 (MQ=60)
                         TTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCA                                                                      <  SRR4302542.6850921/94‑1 (MQ=60)
                          TCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCAC                                                                     <  SRR4302542.6436658/94‑1 (MQ=60)
                          TCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCAC                                                                     <  SRR4302542.2343996/94‑1 (MQ=60)
                           CGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACG                                                                    <  SRR4302542.448878/94‑1 (MQ=60)
                           CGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACG                                                                    >  SRR4302542.2288189/1‑94 (MQ=60)
                           CGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACG                                                                    <  SRR4302542.2420061/94‑1 (MQ=60)
                           CGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACG                                                                    >  SRR4302542.6398414/1‑94 (MQ=60)
                            GAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGT                                                                   >  SRR4302542.6517927/1‑94 (MQ=60)
                            GAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGT                                                                   <  SRR4302542.1063559/94‑1 (MQ=60)
                            GAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGT                                                                   >  SRR4302542.2097561/1‑94 (MQ=60)
                             AAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTT                                                                  >  SRR4302542.7103492/1‑94 (MQ=60)
                             AAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTT                                                                  >  SRR4302542.4153847/1‑94 (MQ=60)
                             AAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTT                                                                  <  SRR4302542.3510032/94‑1 (MQ=60)
                              AACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTT                                                                 >  SRR4302542.2647155/1‑94 (MQ=60)
                              AACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTT                                                                 <  SRR4302542.2597703/94‑1 (MQ=60)
                              AACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTT                                                                 >  SRR4302542.3817475/1‑94 (MQ=60)
                                 CGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTG                                                              >  SRR4302542.2795413/1‑94 (MQ=60)
                                 CGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTG                                                              >  SRR4302542.3718540/1‑94 (MQ=60)
                                 CGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTG                                                              >  SRR4302542.6129375/1‑94 (MQ=60)
                                 CGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTG                                                              >  SRR4302542.1416481/1‑94 (MQ=60)
                                   TTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCG                                                            <  SRR4302542.1807742/94‑1 (MQ=60)
                                   TTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCG                                                            <  SRR4302542.425852/94‑1 (MQ=60)
                                    TAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGG                                                           <  SRR4302542.264691/94‑1 (MQ=60)
                                     AGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGG                                                          <  SRR4302542.25753/94‑1 (MQ=60)
                                      GTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGC                                                         >  SRR4302542.1959301/1‑94 (MQ=60)
                                      GTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGC                                                         >  SRR4302542.6208761/1‑94 (MQ=60)
                                      GTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGC                                                         >  SRR4302542.1274097/1‑94 (MQ=60)
                                      GTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGC                                                         >  SRR4302542.837801/1‑94 (MQ=60)
                                        CAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCAT                                                       <  SRR4302542.640635/94‑1 (MQ=60)
                                        CAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCAT                                                       >  SRR4302542.6569312/1‑94 (MQ=60)
                                        CAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCAT                                                       <  SRR4302542.1246262/94‑1 (MQ=60)
                                         AGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATG                                                      >  SRR4302542.269479/1‑94 (MQ=60)
                                         AGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATG                                                      >  SRR4302542.7185825/1‑94 (MQ=60)
                                         AGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATG                                                      >  SRR4302542.3147797/1‑94 (MQ=60)
                                          GACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGC                                                     <  SRR4302542.1619264/94‑1 (MQ=60)
                                              AACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCC                                                 <  SRR4302542.3346617/94‑1 (MQ=60)
                                              AACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCC                                                 >  SRR4302542.6955776/1‑94 (MQ=60)
                                              AACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCC                                                 >  SRR4302542.2465607/1‑94 (MQ=60)
                                               ACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCA                                                >  SRR4302542.1545803/1‑94 (MQ=60)
                                                CACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAG                                               >  SRR4302542.4564911/1‑94 (MQ=60)
                                                 ACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGC                                              >  SRR4302542.4151727/1‑94 (MQ=60)
                                                  CGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCG                                             >  SRR4302542.4585380/1‑94 (MQ=60)
                                                   GGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGC                                            >  SRR4302542.4160275/1‑94 (MQ=60)
                                                   GGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGC                                            >  SRR4302542.7494877/1‑94 (MQ=60)
                                                     CATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGGGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAG                                          >  SRR4302542.4967256/1‑94 (MQ=60)
                                                      ATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGG                                         >  SRR4302542.2428130/1‑94 (MQ=60)
                                                      ATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGG                                         <  SRR4302542.2852506/94‑1 (MQ=60)
                                                      ATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGG                                         >  SRR4302542.1933515/1‑94 (MQ=60)
                                                      ATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGG                                         <  SRR4302542.4988315/94‑1 (MQ=60)
                                                       TACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGC                                        >  SRR4302542.6192132/1‑94 (MQ=60)
                                                        TCTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCA                                       <  SRR4302542.6318032/94‑1 (MQ=60)
                                                         CTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCAC                                      >  SRR4302542.5481705/1‑94 (MQ=60)
                                                          TTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACG                                     <  SRR4302542.3642552/94‑1 (MQ=60)
                                                          TTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACG                                     >  SRR4302542.5567996/1‑94 (MQ=60)
                                                            TACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTT                                   <  SRR4302542.1641273/94‑1 (MQ=60)
                                                            TACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTT                                   <  SRR4302542.1943536/94‑1 (MQ=60)
                                                            TACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTT                                   <  SRR4302542.4767504/94‑1 (MQ=60)
                                                            TACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTT                                   <  SRR4302542.3882217/94‑1 (MQ=60)
                                                             ACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTG                                  <  SRR4302542.1161973/94‑1 (MQ=60)
                                                              CGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGC                                 >  SRR4302542.1515947/1‑94 (MQ=60)
                                                              CGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGC                                 >  SRR4302542.7442944/1‑94 (MQ=60)
                                                              CGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGC                                 >  SRR4302542.1706991/1‑94 (MQ=60)
                                                               GCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCT                                <  SRR4302542.5160736/94‑1 (MQ=60)
                                                                 AGCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTT                              >  SRR4302542.5755834/1‑94 (MQ=60)
                                                                  GCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTT                             <  SRR4302542.7189700/94‑1 (MQ=60)
                                                                  GCGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTT                             <  SRR4302542.2373464/94‑1 (MQ=60)
                                                                   CGCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTC                            >  SRR4302542.6925298/1‑94 (MQ=60)
                                                                    GCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCG                           <  SRR4302542.3642156/94‑1 (MQ=60)
                                                                    GCGGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCG                           <  SRR4302542.3192132/94‑1 (MQ=60)
                                                                      GGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCA                         >  SRR4302542.571518/1‑94 (MQ=60)
                                                                      GGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCA                         <  SRR4302542.3910488/94‑1 (MQ=60)
                                                                      GGAGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCA                         <  SRR4302542.3710657/94‑1 (MQ=60)
                                                                        AGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAAC                       <  SRR4302542.2671683/94‑1 (MQ=60)
                                                                        AGTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAAC                       >  SRR4302542.742645/1‑94 (MQ=60)
                                                                         GTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACT                      >  SRR4302542.7136424/1‑94 (MQ=60)
                                                                         GTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACT                      >  SRR4302542.2175385/1‑94 (MQ=60)
                                                                         GTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACT                      >  SRR4302542.7472656/1‑94 (MQ=60)
                                                                         GTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACT                      >  SRR4302542.3016270/1‑94 (MQ=60)
                                                                         GTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACT                      >  SRR4302542.2959399/1‑94 (MQ=60)
                                                                         GTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACT                      >  SRR4302542.4146651/1‑94 (MQ=60)
                                                                         GTTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACT                      <  SRR4302542.2562528/94‑1 (MQ=60)
                                                                          TTCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTT                     >  SRR4302542.482206/1‑94 (MQ=60)
                                                                           TCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTT                    <  SRR4302542.6985729/94‑1 (MQ=60)
                                                                           TCGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTT                    >  SRR4302542.5459376/1‑94 (MQ=60)
                                                                            CGGTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTG                   <  SRR4302542.1295266/94‑1 (MQ=60)
                                                                              GTTTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCG                 >  SRR4302542.3289357/1‑94 (MQ=60)
                                                                                TTTTTAGGAGTGGCAGTATATACACGAGTACGTACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAG               <  SRR4302542.3149953/94‑1 (MQ=60)
                                                                                TTTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAG               >  SRR4302542.6454747/1‑94 (MQ=60)
                                                                                 TTTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGC              <  SRR4302542.6747591/94‑1 (MQ=60)
                                                                                  TTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCA             <  SRR4302542.1552156/94‑1 (MQ=60)
                                                                                  TTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCA             <  SRR4302542.1552157/94‑1 (MQ=60)
                                                                                  TTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCA             >  SRR4302542.6321714/1‑94 (MQ=60)
                                                                                  TTTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCA             <  SRR4302542.6410176/94‑1 (MQ=60)
                                                                                   TTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCAC            >  SRR4302542.1467142/1‑94 (MQ=60)
                                                                                   TTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCAC            <  SRR4302542.5364982/94‑1 (MQ=60)
                                                                                   TTAGGAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCAC            <  SRR4302542.118233/94‑1 (MQ=60)
                                                                                       GAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGG        <  SRR4302542.3466616/94‑1 (MQ=60)
                                                                                       GAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGG        <  SRR4302542.4605324/94‑1 (MQ=60)
                                                                                       GAGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGG        <  SRR4302542.1182234/94‑1 (MQ=60)
                                                                                        AGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGT       >  SRR4302542.4348360/1‑94 (MQ=60)
                                                                                        AGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGT       <  SRR4302542.2092774/94‑1 (MQ=60)
                                                                                        AGTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGT       >  SRR4302542.5950468/1‑94 (MQ=60)
                                                                                         GTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTT      >  SRR4302542.11895/1‑94 (MQ=60)
                                                                                         GTGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTT      >  SRR4302542.3455628/1‑94 (MQ=60)
                                                                                          TGGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTT     <  SRR4302542.7223334/94‑1 (MQ=60)
                                                                                           GGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTG    <  SRR4302542.3955768/94‑1 (MQ=60)
                                                                                           GGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTG    <  SRR4302542.598953/94‑1 (MQ=60)
                                                                                           GGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTG    <  SRR4302542.5940346/94‑1 (MQ=60)
                                                                                           GGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTG    <  SRR4302542.2260775/94‑1 (MQ=60)
                                                                                           GGCAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTG    <  SRR4302542.6209760/94‑1 (MQ=60)
                                                                                            GTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGC   <  SRR4302542.2197252/94‑1 (MQ=60)
                                                                                             CAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCG  >  SRR4302542.3099777/1‑94 (MQ=60)
                                                                                             CAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCG  >  SRR4302542.4208522/1‑94 (MQ=60)
                                                                                             CAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCG  <  SRR4302542.5754540/94‑1 (MQ=60)
                                                                                             |                                                                                             
CTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCG  >  NC_000913/3471979‑3472165

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑