Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,522,256	G→C	G591A (GGC→GCC)	mrcA →	penicillin‑binding protein 1A

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,522,256	0	G	C	83.5%	847.6 / 146.2	309	G591A (GGC→GCC)	mrcA	penicillin‑binding protein 1A
Reads supporting (aligned to +/- strand): ref base G (17/34); new base C (108/150); total (125/184)
Fisher's exact test for biased strand distribution p-value = 2.78e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.02e-01

Only 100 of 316 total aligned reads displayed.

ACAAAACATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGCCTGCCCG  >  NC_000913/3522164‑3522347

   aaaCATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAAcgccgg                                                                                          >  1:3918476/1‑93 (MQ=255)

    aaCATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACgccggc                                                                                         >  1:1366613/1‑93 (MQ=255)

      cATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCtt                                                                                       <  1:7358822/93‑1 (MQ=255)

        ttGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGACTACGCGGTCATGGCGAACGCCGGCTTcc                                                                                     <  1:6391889/93‑1 (MQ=255)

         tGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCt                                                                                    <  2:206282/93‑1 (MQ=255)

         tGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCt                                                                                    <  2:6257222/93‑1 (MQ=255)

           tCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCtgg                                                                                  <  2:7003286/93‑1 (MQ=255)

             cacaCCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCtggtg                                                                                <  1:5923564/93‑1 (MQ=255)

               cacCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGa                                                                              <  2:443832/93‑1 (MQ=255)

               cacCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGa                                                                              >  2:6501671/1‑93 (MQ=255)

               cacCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGa                                                                              <  2:1088376/93‑1 (MQ=255)

               cacCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGa                                                                              >  2:3266546/1‑93 (MQ=255)

                acCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGAc                                                                             <  2:6607607/93‑1 (MQ=255)

                 ccGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGAcc                                                                            <  1:2816134/93‑1 (MQ=255)

                  cGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGAccc                                                                           >  1:656189/1‑93 (MQ=255)

                  cGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGAccc                                                                           <  1:3248847/93‑1 (MQ=255)

                  cGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGAccc                                                                           <  2:5417743/93‑1 (MQ=255)

                    aaTCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGt                                                                         <  1:4634887/93‑1 (MQ=255)

                    aaTCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGt                                                                         >  1:6812051/1‑93 (MQ=255)

                    aaTCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGt                                                                         >  2:5047086/1‑93 (MQ=255)

                     aTCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTg                                                                        <  1:1045969/93‑1 (MQ=255)

                     aTCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTg                                                                        <  1:2547469/93‑1 (MQ=255)

                      tCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTgg                                                                       >  1:2716077/1‑93 (MQ=255)

                        gctggcgctggGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGtt                                                                     <  1:3696358/93‑1 (MQ=255)

                         ctggcgctggGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGttt                                                                    <  2:6432148/93‑1 (MQ=255)

                          tggcgctggGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTa                                                                   <  1:2275591/93‑1 (MQ=255)

                            gcgctggGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATc                                                                 <  2:1306165/93‑1 (MQ=255)

                            gcgctggGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATc                                                                 >  2:2234066/1‑93 (MQ=255)

                            gcgctggGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATc                                                                 <  2:231533/93‑1 (MQ=255)

                            gcgctggGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATc                                                                 <  2:3552069/93‑1 (MQ=255)

                             cgctggGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCa                                                                <  1:5442628/93‑1 (MQ=255)

                             cgctggGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCa                                                                <  1:1326624/93‑1 (MQ=255)

                              gctggGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAg                                                               >  1:1964850/1‑93 (MQ=255)

                               ctggGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGc                                                              >  2:73412/1‑93 (MQ=255)

                                tggGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCa                                                             <  1:6027808/93‑1 (MQ=255)

                                  ggTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCaaa                                                           >  1:6055162/1‑93 (MQ=255)

                                   gTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCaaaa                                                          <  1:29350/93‑1 (MQ=255)

                                    ttCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAAt                                                         <  1:5696363/93‑1 (MQ=255)

                                    ttCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAAt                                                         <  1:5494634/93‑1 (MQ=255)

                                    ttCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAAt                                                         >  1:5626008/1‑93 (MQ=255)

                                       aGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGa                                                      >  1:2158325/1‑93 (MQ=255)

                                       aGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGa                                                      <  2:2397451/93‑1 (MQ=255)

                                        gCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGaa                                                     <  1:5383855/93‑1 (MQ=255)

                                        gCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGaa                                                     >  1:5256900/1‑93 (MQ=255)

                                         cGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGaaa                                                    <  1:4081914/93‑1 (MQ=255)

                                          gTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGaaaa                                                   <  2:5139323/93‑1 (MQ=255)

                                           tCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAAc                                                  <  1:4259310/93‑1 (MQ=255)

                                           tCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAAc                                                  <  2:1133964/93‑1 (MQ=255)

                                              ttCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGAt                                               >  1:5045223/1‑93 (MQ=255)

                                               tCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATc                                              <  2:528200/93‑1 (MQ=255)

                                                cACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCa                                             <  2:6720346/93‑1 (MQ=255)

                                                 aCCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAg                                            >  2:3725706/1‑93 (MQ=255)

                                                  ccccAACGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAgg                                           <  2:4340629/93‑1 (MQ=255)

                                                   cccAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAggg                                          <  1:6654862/93‑1 (MQ=255)

                                                    ccAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGggc                                         >  1:4913826/1‑93 (MQ=255)

                                                    ccAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGggc                                         >  2:1781087/1‑93 (MQ=255)

                                                     cAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGggcg                                        <  2:802277/93‑1 (MQ=255)

                                                     cAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGggcg                                        >  2:1665662/1‑93 (MQ=255)

                                                     cAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGggcg                                        <  1:1248992/93‑1 (MQ=255)

                                                     cAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGggcg                                        <  1:1636757/93‑1 (MQ=255)

                                                      aaTGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGggcgg                                       >  2:4647261/1‑93 (MQ=255)

                                                      aaTGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGggcgg                                       >  2:6032790/1‑93 (MQ=255)

                                                       aTGCAGATGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGggcggc                                      >  2:2684351/1‑93 (MQ=255)

                                                        tGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGgcggcg                                     >  2:2132197/1‑93 (MQ=255)

                                                         gCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGt                                    <  1:2973123/93‑1 (MQ=255)

                                                          cAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGGaagcc                                                         >  2:3947169/1‑68 (MQ=255)

                                                          cAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGGaagcc                                                         <  1:3947169/71‑4 (MQ=255)

                                                          cAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTg                                   <  1:2448362/93‑1 (MQ=255)

                                                           aGGTGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGa                                  <  2:707902/93‑1 (MQ=255)

                                                              tGGCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGAttt                               >  2:3224256/1‑93 (MQ=255)

                                                               ggCGCGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGAtttt                              <  2:4521362/93‑1 (MQ=255)

                                                                   cgcgGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGaa                          <  2:7154817/93‑1 (MQ=255)

                                                                   cgcgGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGaa                          <  1:1572756/93‑1 (MQ=255)

                                                                     cgGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGc                        <  1:6965577/93‑1 (MQ=255)

                                                                      ggCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCg                       >  2:520165/1‑93 (MQ=255)

                                                                         tACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGaaa                    >  2:4915894/1‑93 (MQ=255)

                                                                         tACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGaaa                    >  2:5582629/1‑93 (MQ=255)

                                                                          aCGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAAc                   <  2:1900968/93‑1 (MQ=255)

                                                                          aCGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAAc                   <  1:2663404/93‑1 (MQ=255)

                                                                          aCGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAAc                   <  1:7089167/93‑1 (MQ=255)

                                                                           cgcgGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAAcc                  <  1:843032/93‑1 (MQ=255)

                                                                              ggTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGaa               <  2:7314034/93‑1 (MQ=255)

                                                                               gTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGaaa              <  2:1459306/93‑1 (MQ=255)

                                                                               gTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGaaa              <  1:3644413/93‑1 (MQ=255)

                                                                               gTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGaaa              >  2:467996/1‑93 (MQ=255)

                                                                                tCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAg             <  2:7468557/93‑1 (MQ=255)

                                                                                tCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAg             >  2:4214341/1‑93 (MQ=255)

                                                                                tCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAg             >  1:4006508/1‑93 (MQ=255)

                                                                                 cATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGt            <  2:4814768/93‑1 (MQ=255)

                                                                                 cATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGt            <  2:2451507/93‑1 (MQ=255)

                                                                                  aTGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTa           <  1:2323047/93‑1 (MQ=255)

                                                                                  aTGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTa           <  1:5789629/93‑1 (MQ=255)

                                                                                   tGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAg          >  2:5877201/1‑93 (MQ=255)

                                                                                   tGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAg          <  2:7526430/93‑1 (MQ=255)

                                                                                    nncGACCGCCGGCTTCCTGGTGG‑CCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGcc        <  1:2235296/91‑1 (MQ=255)

                                                                                     gCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGcc        <  1:4861132/93‑1 (MQ=255)

                                                                                     gCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGcc        <  2:5750736/93‑1 (MQ=255)

                                                                                      cGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGCCt       <  2:2975499/93‑1 (MQ=255)

                                                                                       gAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGCCTg      >  2:6824585/1‑93 (MQ=255)

                                                                                         aCGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGCCTGcc    <  1:4456201/93‑1 (MQ=255)

ACAAAACATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGCCTGCCCG  >  NC_000913/3522164‑3522347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CACAAAACATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGCCTGCCCGGA  >  NC_000913/3522163‑3522349

CACAAAACATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGG                                                                                               <  SRR4302542.2744531/94‑1 (MQ=60)

 ACAAAACATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCGCCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCC                                                                                              <  SRR4302542.1118590/94‑1 (MQ=60)

 ACAAAACATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGC                                                                                              >  SRR4302542.6113029/1‑94 (MQ=60)

 ACAAAACATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGC                                                                                              <  SRR4302542.4890288/94‑1 (MQ=60)

 ACAAAACATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCC                                                                                              <  SRR4302542.6789890/94‑1 (MQ=60)

 ACAAAACATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCC                                                                                              >  SRR4302542.1631918/1‑94 (MQ=60)

  CAAAACATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCG                                                                                             <  SRR4302542.816310/94‑1 (MQ=60)

  CAAAACATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCG                                                                                             <  SRR4302542.6572140/94‑1 (MQ=60)

  CAAAACATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCG                                                                                             <  SRR4302542.4473044/94‑1 (MQ=60)

  CAAAACATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCG                                                                                             <  SRR4302542.2659746/94‑1 (MQ=60)

   AAAACATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGG                                                                                            >  SRR4302542.3957137/1‑94 (MQ=60)

    AAACATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGC                                                                                           >  SRR4302542.1378424/1‑94 (MQ=60)

     AACATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCT                                                                                          >  SRR4302542.671813/1‑94 (MQ=60)

     AACATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCT                                                                                          >  SRR4302542.3129142/1‑94 (MQ=60)

      ACATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTT                                                                                         <  SRR4302542.879281/94‑1 (MQ=60)

      ACATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTT                                                                                         <  SRR4302542.4173535/94‑1 (MQ=60)

       CATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTC                                                                                        <  SRR4302542.7430903/94‑1 (MQ=60)

        ATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCC                                                                                       >  SRR4302542.1157717/1‑94 (MQ=60)

         TTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCT                                                                                      <  SRR4302542.248061/94‑1 (MQ=60)

         TTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGACTACGCGGTCATGGCGAACGCCGGCTTCCT                                                                                      <  SRR4302542.6454859/94‑1 (MQ=60)

          TGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTG                                                                                     >  SRR4302542.440010/1‑94 (MQ=60)

          TGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTG                                                                                     <  SRR4302542.504870/94‑1 (MQ=60)

           GTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGG                                                                                    <  SRR4302542.3710221/94‑1 (MQ=60)

           GTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGG                                                                                    <  SRR4302542.3181227/94‑1 (MQ=60)

           GTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGG                                                                                    <  SRR4302542.5751336/94‑1 (MQ=60)

           GTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGG                                                                                    <  SRR4302542.6401600/94‑1 (MQ=60)

            TCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGT                                                                                   >  SRR4302542.6521100/1‑94 (MQ=60)

             CCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTG                                                                                  <  SRR4302542.5403094/94‑1 (MQ=60)

              CACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGG                                                                                 <  SRR4302542.5980960/94‑1 (MQ=60)

                CACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGAC                                                                               >  SRR4302542.5754893/1‑94 (MQ=60)

                CACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGAC                                                                               >  SRR4302542.1733640/1‑94 (MQ=60)

                CACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGGCATGGCGAACGCCGGCTTCCTGGTGGAC                                                                               >  SRR4302542.2833139/1‑94 (MQ=60)

                 ACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACC                                                                              >  SRR4302542.2228998/1‑94 (MQ=60)

                  CCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCC                                                                             <  SRR4302542.2843226/94‑1 (MQ=60)

                  CCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCC                                                                             >  SRR4302542.661849/1‑94 (MQ=60)

                   CGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCG                                                                            <  SRR4302542.3279548/94‑1 (MQ=60)

                   CGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCG                                                                            >  SRR4302542.4268714/1‑94 (MQ=60)

                   CGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCG                                                                            >  SRR4302542.6712009/1‑94 (MQ=60)

                    GAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGT                                                                           >  SRR4302542.6879016/1‑94 (MQ=60)

                    GAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGT                                                                           >  SRR4302542.4360619/1‑94 (MQ=60)

                     AATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTG                                                                          <  SRR4302542.4680176/94‑1 (MQ=60)

                     AATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTG                                                                          <  SRR4302542.4108292/94‑1 (MQ=60)

                      ATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGG                                                                         <  SRR4302542.1054943/94‑1 (MQ=60)

                      ATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGG                                                                         <  SRR4302542.2945844/94‑1 (MQ=60)

                      ATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGG                                                                         <  SRR4302542.2572153/94‑1 (MQ=60)

                      ATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGG                                                                         >  SRR4302542.2742269/1‑94 (MQ=60)

                       TCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGT                                                                        <  SRR4302542.5449372/94‑1 (MQ=60)

                        CGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTT                                                                       <  SRR4302542.2697014/94‑1 (MQ=60)

                        CGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTT                                                                       <  SRR4302542.5528536/94‑1 (MQ=60)

                        CGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTT                                                                       >  SRR4302542.1575428/1‑94 (MQ=60)

                         GCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTT                                                                      >  SRR4302542.6013636/1‑94 (MQ=60)

                         GCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTT                                                                      <  SRR4302542.3732933/94‑1 (MQ=60)

                          CTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTA                                                                     >  SRR4302542.1865258/1‑94 (MQ=60)

                           TGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTAT                                                                    <  SRR4302542.2295154/94‑1 (MQ=60)

                           TGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTAT                                                                    >  SRR4302542.2319028/1‑94 (MQ=60)

                            GGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATC                                                                   <  SRR4302542.2289119/94‑1 (MQ=60)

                            GGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATC                                                                   <  SRR4302542.4014396/94‑1 (MQ=60)

                             GCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCA                                                                  <  SRR4302542.721362/94‑1 (MQ=60)

                             GCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCA                                                                  <  SRR4302542.3468448/94‑1 (MQ=60)

                              CGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAG                                                                 <  SRR4302542.3975544/94‑1 (MQ=60)

                              CGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAG                                                                 <  SRR4302542.5495505/94‑1 (MQ=60)

                              CGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGGTTATCAG                                                                 >  SRR4302542.6814268/1‑94 (MQ=60)

                              CGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAG                                                                 <  SRR4302542.5370092/94‑1 (MQ=60)

                              CGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAG                                                                 >  SRR4302542.1981829/1‑94 (MQ=60)

                              CGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAG                                                                 <  SRR4302542.1338050/94‑1 (MQ=60)

                              CGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAG                                                                 <  SRR4302542.1598182/94‑1 (MQ=60)

                              CGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAG                                                                 <  SRR4302542.3416263/94‑1 (MQ=60)

                              CGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAG                                                                 <  SRR4302542.2121369/94‑1 (MQ=60)

                              CGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAG                                                                 >  SRR4302542.7184639/1‑94 (MQ=60)

                              CGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAG                                                                 <  SRR4302542.2809827/94‑1 (MQ=60)

                                 TGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAA                                                              <  SRR4302542.4014822/94‑1 (MQ=60)

                                 TGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAA                                                              <  SRR4302542.6086176/94‑1 (MQ=60)

                                 TGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAA                                                              <  SRR4302542.5626152/94‑1 (MQ=60)

                                  GGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAA                                                             >  SRR4302542.6113775/1‑94 (MQ=60)

                                    GTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAAT                                                           <  SRR4302542.4802377/94‑1 (MQ=60)

                                    GTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAAT                                                           <  SRR4302542.29612/94‑1 (MQ=60)

                                    GTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAAT                                                           >  SRR4302542.5680640/1‑94 (MQ=60)

                                     cgctcttccgatctgagagtTGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGgaagccg                                                          <  SRR4302542.3986146/74‑8 (MQ=60)

                                     TTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATT                                                          <  SRR4302542.5816606/94‑1 (MQ=60)

                                     TTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATT                                                          <  SRR4302542.5548005/94‑1 (MQ=60)

                                     TTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATT                                                          <  SRR4302542.2989995/94‑1 (MQ=60)

                                     TTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATT                                                          <  SRR4302542.5751662/94‑1 (MQ=60)

                                      TCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTG                                                         <  SRR4302542.4509781/94‑1 (MQ=60)

                                       CAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGA                                                        <  SRR4302542.829522/94‑1 (MQ=60)

                                       CAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGA                                                        >  SRR4302542.6101084/1‑94 (MQ=60)

                                       CAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGA                                                        >  SRR4302542.2176909/1‑94 (MQ=60)

                                        AGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAA                                                       >  SRR4302542.5307993/1‑94 (MQ=60)

                                        AGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAA                                                       <  SRR4302542.4596199/94‑1 (MQ=60)

                                         GCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAA                                                      <  SRR4302542.5436156/94‑1 (MQ=60)

                                          CGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAA                                                     <  SRR4302542.4122146/94‑1 (MQ=60)

                                          CGTCCTTCACCCCAATGCAGGGGGCG‑CGCGGCTACGCGGTCTTGGCGAACGGCGGCTTCCTGGCGGACCCGTGGTTTATCAGCAAAATTGAAAA                                                     >  SRR4302542.4957162/1‑94 (MQ=60)

                                           GTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAAC                                                    <  SRR4302542.4216214/94‑1 (MQ=60)

                                           GTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAAC                                                    <  SRR4302542.2323067/94‑1 (MQ=60)

                                            TCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACG                                                   <  SRR4302542.4301250/94‑1 (MQ=60)

                                              CTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGAT                                                 <  SRR4302542.5665425/94‑1 (MQ=60)

                                              CTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGAT                                                 <  SRR4302542.1568129/94‑1 (MQ=60)

                                              CTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGAT                                                 >  SRR4302542.5094197/1‑94 (MQ=60)

                                               TTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATC                                                >  SRR4302542.5015458/1‑94 (MQ=60)

                                                TCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCA                                               >  SRR4302542.5859524/1‑94 (MQ=60)

                                                TCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCA                                               <  SRR4302542.4107721/94‑1 (MQ=60)

                                                  ACCCCAATGCAGGTGGCGCCGCGGCTCCGCGTTAATGGCGAACGCCGGTTTCCTGGTGGCCCCTTGTTTTATCAGCAAAATTGAAACCGATCAG                                              <  SRR4302542.2389281/94‑1 (MQ=36)

                                                  ACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGG                                             >  SRR4302542.2999372/1‑94 (MQ=60)

                                                   CCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGG                                            <  SRR4302542.2603020/94‑1 (MQ=60)

                                                   CCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGG                                            >  SRR4302542.2268387/1‑94 (MQ=60)

                                                    CCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGC                                           <  SRR4302542.6720434/94‑1 (MQ=60)

                                                    CCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGC                                           >  SRR4302542.4961616/1‑94 (MQ=60)

                                                    CCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGC                                           <  SRR4302542.4913328/94‑1 (MQ=60)

                                                    CCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGC                                           <  SRR4302542.2003113/94‑1 (MQ=60)

                                                     CCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCG                                          <  SRR4302542.6637309/94‑1 (MQ=60)

                                                      CAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGG                                         <  SRR4302542.1259732/94‑1 (MQ=60)

                                                      CAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGG                                         <  SRR4302542.1650907/94‑1 (MQ=60)

                                                        ATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCG                                       <  SRR4302542.1124694/94‑1 (MQ=60)

                                                        ATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCG                                       >  SRR4302542.6486802/1‑94 (MQ=60)

                                                         TGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGGGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGT                                      >  SRR4302542.3688075/1‑94 (MQ=60)

                                                          GCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTG                                     <  SRR4302542.3001596/94‑1 (MQ=60)

                                                           CAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGA                                    >  SRR4302542.5175066/1‑94 (MQ=60)

                                                           CAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGA                                    <  SRR4302542.2472179/94‑1 (MQ=60)

                                                            AGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGAT                                   >  SRR4302542.1291750/1‑94 (MQ=60)

                                                               TGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTT                                <  SRR4302542.5472836/94‑1 (MQ=60)

                                                               TGGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTT                                <  SRR4302542.7090996/94‑1 (MQ=60)

                                                                GGCG‑CGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTC                               <  SRR4302542.5425106/94‑1 (MQ=60)

                                                                GGCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTC                               <  SRR4302542.6426986/94‑1 (MQ=60)

                                                                 GCG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCG                              <  SRR4302542.5958831/94‑1 (MQ=60)

                                                                  CG‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGA                             >  SRR4302542.2945119/1‑94 (MQ=60)

                                                                   G‑CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTCCGAA                            <  SRR4302542.7037017/94‑1 (MQ=60)

                                                                     CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAG                           <  SRR4302542.2620053/94‑1 (MQ=60)

                                                                     CGCGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAG                           <  SRR4302542.1586337/94‑1 (MQ=60)

                                                                       CGGCTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCG                         <  SRR4302542.7034012/94‑1 (MQ=60)

                                                                          CTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGCCCCGTGGTTTATCAGCAAAATTGAAAACGATCGGGGCGCCGTGATcgttttcaatttt                      <  SRR4302542.6245071/94‑14 (MQ=60)

                                                                          CTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAA                      >  SRR4302542.223440/1‑94 (MQ=60)

                                                                          CTACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAA                      >  SRR4302542.2679048/1‑94 (MQ=60)

                                                                           TACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAAC                     <  SRR4302542.2115840/94‑1 (MQ=60)

                                                                           TACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAAC                     <  SRR4302542.1645264/94‑1 (MQ=60)

                                                                            ACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACC                    <  SRR4302542.7158724/94‑1 (MQ=60)

                                                                            ACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACC                    <  SRR4302542.1343950/94‑1 (MQ=60)

                                                                            ACGCGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACC                    <  SRR4302542.2689110/94‑1 (MQ=60)

                                                                             CGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCG                   <  SRR4302542.850309/94‑1 (MQ=60)

                                                                              GCGGTCATGGCGAACGCCGGCTTCCTGGCGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGA                  >  SRR4302542.5712516/1‑94 (MQ=60)

                                                                               CGGTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAA                 >  SRR4302542.7001775/1‑94 (MQ=60)

                                                                                 GTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAG               >  SRR4302542.4046015/1‑94 (MQ=60)

                                                                                 GTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAG               <  SRR4302542.3746701/94‑1 (MQ=60)

                                                                                 GTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAG               <  SRR4302542.2384885/94‑1 (MQ=60)

                                                                                 GTCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAG               <  SRR4302542.3678425/94‑1 (MQ=60)

                                                                                  TCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGT              <  SRR4302542.2509678/94‑1 (MQ=60)

                                                                                  TCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGT              <  SRR4302542.6028872/94‑1 (MQ=60)

                                                                                  TCATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGT              <  SRR4302542.3805405/94‑1 (MQ=60)

                                                                                    ATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAG            <  SRR4302542.751818/94‑1 (MQ=60)

                                                                                    ATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAG            >  SRR4302542.6797972/1‑94 (MQ=60)

                                                                                    ATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAG            <  SRR4302542.5845836/94‑1 (MQ=60)

                                                                                    ATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAG            <  SRR4302542.2342965/94‑1 (MQ=60)

                                                                                    ATGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAG            >  SRR4302542.1277837/1‑94 (MQ=60)

                                                                                     TGGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGC           <  SRR4302542.6895253/94‑1 (MQ=60)

                                                                                      GGCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGCC          <  SRR4302542.2711491/94‑1 (MQ=60)

                                                                                       GCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGCCT         <  SRR4302542.1343808/94‑1 (MQ=60)

                                                                                       GCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGCCT         <  SRR4302542.3351901/94‑1 (MQ=60)

                                                                                       GCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGCCT         <  SRR4302542.5180064/94‑1 (MQ=60)

                                                                                       GCGAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGCCA         <  SRR4302542.4908474/94‑1 (MQ=60)

                                                                                         GAACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGCCTGC       >  SRR4302542.5514995/1‑94 (MQ=60)

                                                                                          AACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGCCTGCC      <  SRR4302542.593990/94‑1 (MQ=60)

                                                                                           ACGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGCCTGCCC     <  SRR4302542.4499910/94‑1 (MQ=60)

                                                                                            CGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGCCTGCCCG    >  SRR4302542.3969765/1‑94 (MQ=60)

                                                                                            CGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGCCTGCCCG    >  SRR4302542.2777327/1‑94 (MQ=60)

                                                                                            CGCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGCCTGCCCG    <  SRR4302542.2512127/94‑1 (MQ=60)

                                                                                             GCCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGCCTGCCCGG   >  SRR4302542.3908675/1‑94 (MQ=60)

                                                                                              CCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGCCTGCCCGGA  <  SRR4302542.7250313/94‑1 (MQ=60)

                                                                                              CCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGCCTGCCCGGA  >  SRR4302542.250960/1‑94 (MQ=60)

CACAAAACATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCG‑CGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGCCTGCCCGGA  >  NC_000913/3522163‑3522349

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`