Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,584,684	G→A	Q37Q (CAG→CAA)	yhhA →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,584,684	0	G	A	87.5%	853.1 / 71.8	289	Q37Q (CAG→CAA)	yhhA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (18/18); new base A (132/121); total (150/139)
Fisher's exact test for biased strand distribution p-value = 8.60e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.03e-01

Only 100 of 309 total aligned reads displayed.

ACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACAGCAG  >  NC_000913/3584595‑3584774

aCGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACgg                                                                                         >  1:4625406/1‑93 (MQ=255)

aCGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACgg                                                                                         <  2:6755574/93‑1 (MQ=255)

 cGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGa                                                                                        <  2:2205/93‑1 (MQ=255)

  ggCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGAt                                                                                       <  2:5321867/93‑1 (MQ=255)

     aCTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCa                                                                                    <  2:2554324/93‑1 (MQ=255)

      cTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCaa                                                                                   <  2:2432264/93‑1 (MQ=255)

      cTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCaa                                                                                   <  1:6890658/93‑1 (MQ=255)

       tCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCaaa                                                                                  >  1:1024576/1‑93 (MQ=255)

          tGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TGCCCAGCCAGCAACGGATGCAAAccc                                                                               <  2:4645705/93‑1 (MQ=255)

          tGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAAccc                                                                               >  1:3472963/1‑93 (MQ=255)

          tGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAAccc                                                                               <  2:1699801/93‑1 (MQ=255)

          tGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAAccc                                                                               >  2:3477926/1‑93 (MQ=255)

             cGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAGCGGATGCAAACCCAGa                                                                            <  2:5164662/93‑1 (MQ=255)

             cGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAGCGGATGCAAACCCAGa                                                                            >  2:5934253/1‑93 (MQ=255)

             cGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGa                                                                            >  2:1376843/1‑93 (MQ=255)

              gTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAGCGGATGCAAACCCAGAt                                                                           >  1:1992836/1‑93 (MQ=255)

              gTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGAt                                                                           <  2:712775/93‑1 (MQ=255)

               tttGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATg                                                                          >  2:2872793/1‑93 (MQ=255)

                 tGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCa                                                                        <  1:4882165/93‑1 (MQ=255)

                     ggCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACt                                                                    >  2:5871570/1‑93 (MQ=255)

                     ggCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACt                                                                    <  2:5472918/93‑1 (MQ=255)

                      gCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTc                                                                   >  1:137789/1‑93 (MQ=255)

                        tttGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAg                                                                 <  2:4613980/93‑1 (MQ=255)

                        tttGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAg                                                                 >  2:4477389/1‑93 (MQ=255)

                             acaGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAAt                                                            >  2:4806836/1‑93 (MQ=255)

                             acaGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAAt                                                            >  1:3223953/1‑93 (MQ=255)

                             acaGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAAt                                                            >  1:1771048/1‑93 (MQ=255)

                               aGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATcc                                                          >  2:4906102/1‑93 (MQ=255)

                                gCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCa                                                         <  1:4658452/93‑1 (MQ=255)

                                gCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCa                                                         >  2:4015868/1‑93 (MQ=255)

                                  ccATTAATGCTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGc                                                       <  1:5832321/93‑1 (MQ=255)

                                   cATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCa                                                      >  2:5250443/1‑93 (MQ=255)

                                     ttAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCaaa                                                    >  2:1590837/1‑93 (MQ=255)

                                       aaTACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCaaaaa                                                  >  1:6678525/1‑93 (MQ=255)

                                       aaTACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCaaaaa                                                  >  2:3934726/1‑93 (MQ=255)

                                       aaTACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCaaaaa                                                  <  1:3739233/93‑1 (MQ=255)

                                       aaTACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCaaaaa                                                  <  1:3119306/93‑1 (MQ=255)

                                       aaTACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCaaaaa                                                  >  2:7365896/1‑93 (MQ=255)

                                        aTACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAg                                                 >  2:108480/1‑93 (MQ=255)

                                          aCTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAGCGGATGCAAACCCAGATGCATACTCAGCAAATCCAGCAAAAAggg                                               <  1:5386601/93‑1 (MQ=255)

                                          aCTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAggg                                               >  2:2302316/1‑93 (MQ=255)

                                           ctctGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGa                                              <  1:6780170/93‑1 (MQ=255)

                                           ctctGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGa                                              <  1:3581710/93‑1 (MQ=255)

                                              tGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGc                                           >  1:5537063/1‑93 (MQ=255)

                                               gAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGGAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGACGCt                                          <  1:6970642/93‑1 (MQ=255)

                                               gAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCt                                          >  1:212876/1‑93 (MQ=255)

                                                   aacCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAAt                                      >  2:7285965/1‑93 (MQ=255)

                                                    acCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATc                                     >  2:6658938/1‑93 (MQ=255)

                                                     cccTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCa                                    <  1:6007368/93‑1 (MQ=255)

                                                      ccTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAg                                   >  2:5592107/1‑93 (MQ=255)

                                                       cTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGc                                  >  2:3869829/1‑93 (MQ=255)

                                                       cTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGc                                  >  2:268792/1‑93 (MQ=255)

                                                       cTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGc                                  <  1:1624902/93‑1 (MQ=255)

                                                       cTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGc                                  <  1:1649694/93‑1 (MQ=255)

                                                        tAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCa                                 <  1:7143549/93‑1 (MQ=255)

                                                          aCCAGCCGGGGTATCAGA‑TACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAAc                               <  2:6379002/93‑1 (MQ=255)

                                                          aCCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAAc                               >  1:377284/1‑93 (MQ=255)

                                                          aCCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAAc                               <  2:6099195/93‑1 (MQ=255)

                                                          aCCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAAc                               <  1:450518/93‑1 (MQ=255)

                                                          aCCAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAAc                               <  1:7355327/93‑1 (MQ=255)

                                                            cAGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTg                             >  2:3742364/1‑93 (MQ=255)

                                                             aGCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGa                            <  2:2388242/93‑1 (MQ=255)

                                                              gCCGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGaa                           >  1:5275102/1‑93 (MQ=255)

                                                               gcGGGGTATCCGATTCCCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGaa                           <  1:1139681/92‑1 (MQ=255)

                                                                cGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGaaaa                         <  2:3125023/93‑1 (MQ=255)

                                                                cGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGaaaa                         >  2:7178702/1‑93 (MQ=255)

                                                                cGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGaaaa                         <  1:2831335/93‑1 (MQ=255)

                                                                cGGGGTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGaaaa                         <  2:7018447/93‑1 (MQ=255)

                                                                 ggggTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAAc                        >  1:5654671/1‑93 (MQ=255)

                                                                   ggTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGc                      <  1:2308456/93‑1 (MQ=255)

                                                                   ggTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGc                      <  1:5749354/93‑1 (MQ=255)

                                                                    gTATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCa                     <  1:6475964/93‑1 (MQ=255)

                                                                     tATCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCaa                    <  1:5122651/93‑1 (MQ=255)

                                                                      aTCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCaaa                   <  1:2721760/93‑1 (MQ=255)

                                                                      aTCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCaaa                   <  1:5013245/93‑1 (MQ=255)

                                                                       tCAGA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAAc                  >  1:3333837/1‑93 (MQ=255)

                                                                          gA‑TCCCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCa               <  1:3897295/93‑1 (MQ=255)

                                                                          gA‑TACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCa               <  1:4034602/93‑1 (MQ=255)

                                                                          gA‑TACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCa               >  2:4329127/1‑93 (MQ=255)

                                                                           a‑TACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAg              >  2:1981208/1‑93 (MQ=255)

                                                                             tACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGt             >  2:1498377/1‑93 (MQ=255)

                                                                             tACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGt             <  2:6458122/93‑1 (MQ=255)

                                                                              aCCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGtt            <  1:610217/93‑1 (MQ=255)

                                                                                ccagccagCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGc          <  1:4809440/93‑1 (MQ=255)

                                                                                ccagccagCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGc          <  1:6560908/93‑1 (MQ=255)

                                                                                 cagccagcAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCa         >  2:797544/1‑93 (MQ=255)

                                                                                 cagccagcAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCa         >  2:5666447/1‑93 (MQ=255)

                                                                                   gccagcAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAAc       <  2:2120016/93‑1 (MQ=255)

                                                                                   gccagcAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAAc       <  1:3041788/93‑1 (MQ=255)

                                                                                   gccagcAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAAc       <  1:2260059/93‑1 (MQ=255)

                                                                                    ccagcAACGGATGCAACCCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAAca      <  1:6145926/93‑1 (MQ=255)

                                                                                    ccagcAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAAca      >  1:7425537/1‑93 (MQ=255)

                                                                                     cagcaaCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAAcag     >  2:2037883/1‑93 (MQ=255)

                                                                                     cagcaaCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAAcag     <  1:845825/93‑1 (MQ=255)

                                                                                      agcagcGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAAcagc    >  2:6956829/1‑93 (MQ=255)

                                                                                      agcaacGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAAcagc    <  2:1311602/93‑1 (MQ=255)

                                                                                       gcagcGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAAcagca   <  1:7243177/93‑1 (MQ=255)

                                                                                       gcaacGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAAcagca   >  2:3542353/1‑93 (MQ=255)

                                                                                       gcaacGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAAcagca   <  1:6352943/93‑1 (MQ=255)

                                                                                        cagcGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAAcagcag  <  1:2609048/93‑1 (MQ=255)

ACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGA‑TACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACAGCAG  >  NC_000913/3584595‑3584774

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACAGCAGCAT  >  NC_000913/3584591‑3584777

TCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAG                                                                                               <  SRR4302542.4389681/94‑1 (MQ=60)

TCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAA                                                                                               >  SRR4302542.7246775/1‑94 (MQ=60)

   TACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGG                                                                                            >  SRR4302542.7548755/1‑94 (MQ=60)

   TACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGG                                                                                            >  SRR4302542.4670600/1‑94 (MQ=60)

   TACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGG                                                                                            >  SRR4302542.1423142/1‑94 (MQ=60)

        CACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCA                                                                                       <  SRR4302542.1846288/94‑1 (MQ=60)

         GCTCCGGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAA                                                                                      <  SRR4302542.1043870/94‑1 (MQ=60)

         ACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCNN                                                                                      >  SRR4302542.3216236/1‑94 (MQ=60)

         ACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAA                                                                                      <  SRR4302542.1650442/94‑1 (MQ=60)

          CTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAA                                                                                     >  SRR4302542.4809186/1‑94 (MQ=60)

          CTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAA                                                                                     >  SRR4302542.1033403/1‑94 (MQ=60)

          CTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAA                                                                                     >  SRR4302542.6616942/1‑94 (MQ=60)

          CTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAA                                                                                     <  SRR4302542.1774116/94‑1 (MQ=60)

          CTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAA                                                                                     <  SRR4302542.6958330/94‑1 (MQ=60)

          CTCCTGCCGTTTGTCGGCTTTGCACAGCACATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAA                                                                                     >  SRR4302542.5716903/1‑94 (MQ=60)

           TCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATCCTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAAC                                                                                    <  SRR4302542.5158978/94‑1 (MQ=60)

            CCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACC                                                                                   <  SRR4302542.951158/94‑1 (MQ=60)

             CTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCC                                                                                  >  SRR4302542.3505479/1‑94 (MQ=60)

             CTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCC                                                                                  >  SRR4302542.4711373/1‑94 (MQ=60)

              TGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCA                                                                                 >  SRR4302542.7488986/1‑94 (MQ=60)

                CCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGA                                                                               <  SRR4302542.2891590/94‑1 (MQ=60)

                 CGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGAT                                                                              >  SRR4302542.2010032/1‑94 (MQ=60)

                 CGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGAT                                                                              <  SRR4302542.1619022/94‑1 (MQ=60)

                 CGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGAT                                                                              <  SRR4302542.1109560/94‑1 (MQ=60)

                 CGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGAT                                                                              <  SRR4302542.2720803/94‑1 (MQ=60)

                  GTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATG                                                                             >  SRR4302542.3788230/1‑94 (MQ=60)

                  GTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATG                                                                             >  SRR4302542.3505581/1‑94 (MQ=60)

                  GTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATG                                                                             >  SRR4302542.5561747/1‑94 (MQ=60)

                  GTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATG                                                                             >  SRR4302542.2913782/1‑94 (MQ=60)

                  GTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATG                                                                             >  SRR4302542.6962003/1‑94 (MQ=60)

                  GTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATG                                                                             <  SRR4302542.7269904/94‑1 (MQ=60)

                     TGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAG                                                                          >  SRR4302542.5641114/1‑94 (MQ=60)

                     TGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAG                                                                          <  SRR4302542.4929672/94‑1 (MQ=60)

                     TGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAG                                                                          >  SRR4302542.3983570/1‑94 (MQ=60)

                       TCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGAC                                                                        <  SRR4302542.2435166/94‑1 (MQ=60)

                       TCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGAC                                                                        >  SRR4302542.5280625/1‑94 (MQ=60)

                        CGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACT                                                                       >  SRR4302542.6747787/1‑94 (MQ=60)

                        CGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACT                                                                       >  SRR4302542.4114877/1‑94 (MQ=60)

                         GGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTC                                                                      >  SRR4302542.138938/1‑94 (MQ=60)

                           CTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAG                                                                    >  SRR4302542.642212/1‑94 (MQ=60)

                            TTTGCACAGCCCATTAATCCTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGC                                                                   <  SRR4302542.5437207/94‑1 (MQ=60)

                            TTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGC                                                                   <  SRR4302542.2806449/94‑1 (MQ=60)

                               GCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAA                                                                <  SRR4302542.4977743/94‑1 (MQ=60)

                                CACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAAT                                                               <  SRR4302542.5805524/94‑1 (MQ=60)

                                CACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAAT                                                               >  SRR4302542.6989173/1‑94 (MQ=60)

                                CACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAAT                                                               >  SRR4302542.3254462/1‑94 (MQ=60)

                                CACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAAT                                                               >  SRR4302542.1786400/1‑94 (MQ=60)

                                CACAGCCCATTAACTCTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAAT                                                               <  SRR4302542.3680830/94‑1 (MQ=60)

                                  CAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCC                                                             <  SRR4302542.4689506/94‑1 (MQ=60)

                                   ANCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCA                                                            <  SRR4302542.2768927/94‑1 (MQ=60)

                                    GCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAG                                                           >  SRR4302542.6841690/1‑94 (MQ=60)

                                    GCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAG                                                           <  SRR4302542.4703992/94‑1 (MQ=60)

                                    GCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAG                                                           <  SRR4302542.2095063/94‑1 (MQ=60)

                                     CCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGC                                                          >  SRR4302542.4593130/1‑94 (MQ=60)

                                     CCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGC                                                          <  SRR4302542.5127746/94‑1 (MQ=60)

                                     CCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGC                                                          <  SRR4302542.2069389/94‑1 (MQ=60)

                                     CCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGC                                                          >  SRR4302542.6861771/1‑94 (MQ=60)

                                      CCATTAATGCTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCA                                                         <  SRR4302542.5888912/94‑1 (MQ=60)

                                      CCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCA                                                         >  SRR4302542.2162173/1‑94 (MQ=60)

                                      CCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCA                                                         >  SRR4302542.7331476/1‑94 (MQ=60)

                                        ATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAA                                                       >  SRR4302542.5244836/1‑94 (MQ=60)

                                        ATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAA                                                       >  SRR4302542.2840404/1‑94 (MQ=60)

                                          TAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAA                                                     >  SRR4302542.7511123/1‑94 (MQ=60)

                                          TAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAA                                                     >  SRR4302542.6744324/1‑94 (MQ=60)

                                          TAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAA                                                     >  SRR4302542.2593909/1‑94 (MQ=60)

                                           AATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAG                                                    <  SRR4302542.3148979/94‑1 (MQ=60)

                                           AATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAG                                                    <  SRR4302542.3776243/94‑1 (MQ=60)

                                            ATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGG                                                   <  SRR4302542.6505091/94‑1 (MQ=60)

                                             TACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGG                                                  >  SRR4302542.5365936/1‑94 (MQ=60)

                                              ACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCATACTCAGCAAATCCAGCAAAAAGGGA                                                 <  SRR4302542.5438919/94‑1 (MQ=60)

                                              ACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGA                                                 <  SRR4302542.6339085/94‑1 (MQ=60)

                                              ACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGA                                                 >  SRR4302542.5743296/1‑94 (MQ=60)

                                               CTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGAT                                                <  SRR4302542.3615126/94‑1 (MQ=60)

                                               CTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGAT                                                <  SRR4302542.6846864/94‑1 (MQ=60)

                                               CTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGAT                                                <  SRR4302542.5997859/94‑1 (MQ=60)

                                               CTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGAT                                                >  SRR4302542.6162547/1‑94 (MQ=60)

                                                TCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATG                                               <  SRR4302542.4028459/94‑1 (MQ=60)

                                                 CTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGC                                              >  SRR4302542.5590887/1‑94 (MQ=60)

                                                  TGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCT                                             >  SRR4302542.6018823/1‑94 (MQ=60)

                                                  TGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCT                                             >  SRR4302542.214704/1‑94 (MQ=60)

                                                   GAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGGAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGACGCTG                                            <  SRR4302542.7039115/94‑1 (MQ=60)

                                                   GAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTG                                            <  SRR4302542.4688584/94‑1 (MQ=60)

                                                     ACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAA                                          >  SRR4302542.6262164/1‑94 (MQ=60)

                                                       AACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATC                                        >  SRR4302542.3214479/1‑94 (MQ=60)

                                                        ACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCA                                       >  SRR4302542.3084055/1‑94 (MQ=60)

                                                        ACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCA                                       >  SRR4302542.3337185/1‑94 (MQ=60)

                                                        ACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCA                                       >  SRR4302542.2002094/1‑94 (MQ=60)

                                                         CCCTAGCCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAG                                      <  SRR4302542.3619455/94‑1 (MQ=60)

                                                         CCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAG                                      <  SRR4302542.6065544/94‑1 (MQ=60)

                                                          CCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGC                                     <  SRR4302542.3612200/94‑1 (MQ=60)

                                                          CCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGC                                     >  SRR4302542.1738922/1‑94 (MQ=60)

                                                          CCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGC                                     >  SRR4302542.4963913/1‑94 (MQ=60)

                                                          CCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGC                                     >  SRR4302542.5440601/1‑94 (MQ=60)

                                                           CTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCA                                    <  SRR4302542.1638925/94‑1 (MQ=60)

                                                           CTAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCA                                    <  SRR4302542.1663949/94‑1 (MQ=60)

                                                            TAACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAA                                   <  SRR4302542.7213650/94‑1 (MQ=60)

                                                             AACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAAC                                  >  SRR4302542.380568/1‑94 (MQ=60)

                                                             AACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAAC                                  >  SRR4302542.2214957/1‑94 (MQ=60)

                                                             AACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAAC                                  >  SRR4302542.3117987/1‑94 (MQ=60)

                                                             AACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAAC                                  <  SRR4302542.7492324/94‑1 (MQ=60)

                                                              ACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACT                                 >  SRR4302542.5866600/1‑94 (MQ=60)

                                                              ACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACT                                 <  SRR4302542.7427349/94‑1 (MQ=60)

                                                              ACCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACT                                 <  SRR4302542.454410/94‑1 (MQ=60)

                                                               CCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAAGCCAGCAAAAAGGGATGCTGAATCAGCAACTG                                <  SRR4302542.6158558/94‑1 (MQ=60)

                                                               CCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTG                                <  SRR4302542.2287759/94‑1 (MQ=60)

                                                               CCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTG                                >  SRR4302542.6996812/1‑94 (MQ=60)

                                                               CCAGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTG                                >  SRR4302542.3798138/1‑94 (MQ=60)

                                                                 AGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAA                              >  SRR4302542.7065664/1‑94 (MQ=60)

                                                                 AGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAA                              >  SRR4302542.2283393/1‑94 (MQ=60)

                                                                 AGCCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAA                              >  SRR4302542.5326363/1‑94 (MQ=60)

                                                                  gcggggtatccgattcCCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAA                             <  SRR4302542.1149439/78‑1 (MQ=60)

                                                                  GCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAA                             <  SRR4302542.7217968/94‑1 (MQ=60)

                                                                   CCGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAA                            >  SRR4302542.3457027/1‑94 (MQ=60)

                                                                    CGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAAC                           >  SRR4302542.5709566/1‑94 (MQ=60)

                                                                    CGGGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAAC                           <  SRR4302542.2858549/94‑1 (MQ=60)

                                                                     GGGGTATCAGATCCCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACG                          <  SRR4302542.957525/94‑1 (MQ=60)

                                                                      GGGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGC                         <  SRR4302542.6598882/94‑1 (MQ=60)

                                                                       GGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCA                        <  SRR4302542.4918659/94‑1 (MQ=60)

                                                                       GGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCA                        <  SRR4302542.2328279/94‑1 (MQ=60)

                                                                       GGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCA                        <  SRR4302542.5805161/94‑1 (MQ=60)

                                                                       GGTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCA                        <  SRR4302542.6709369/94‑1 (MQ=60)

                                                                        GTATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAA                       <  SRR4302542.6539770/94‑1 (MQ=60)

                                                                         TATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAA                      <  SRR4302542.5172393/94‑1 (MQ=60)

                                                                          ATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAAC                     <  SRR4302542.2747999/94‑1 (MQ=60)

                                                                          ATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAAC                     <  SRR4302542.5061931/94‑1 (MQ=60)

                                                                          ATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAAC                     >  SRR4302542.6640233/1‑94 (MQ=60)

                                                                          ATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAAC                     >  SRR4302542.337107/1‑94 (MQ=60)

                                                                          ATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAAC                     >  SRR4302542.6140214/1‑94 (MQ=60)

                                                                          ATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAAC                     >  SRR4302542.6174223/1‑94 (MQ=60)

                                                                          ATCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAAC                     >  SRR4302542.3365207/1‑94 (MQ=60)

                                                                           TCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACT                    <  SRR4302542.5780850/94‑1 (MQ=60)

                                                                           TCAGATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACT                    <  SRR4302542.4856490/94‑1 (MQ=60)

                                                                             AGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCA                  >  SRR4302542.7123155/1‑94 (MQ=60)

                                                                              GATCCCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAG                 <  SRR4302542.3935771/94‑1 (MQ=60)

                                                                              GATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAG                 <  SRR4302542.4074409/94‑1 (MQ=60)

                                                                              GATACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAG                 <  SRR4302542.1176835/94‑1 (MQ=60)

                                                                                 ACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTG              <  SRR4302542.1661018/94‑1 (MQ=60)

                                                                                 ACCCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTG              <  SRR4302542.615468/94‑1 (MQ=60)

                                                                                   CCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCA            >  SRR4302542.3934736/1‑94 (MQ=60)

                                                                                   CCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCA            <  SRR4302542.4856291/94‑1 (MQ=60)

                                                                                   CCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCA            <  SRR4302542.6625574/94‑1 (MQ=60)

                                                                                   CCAGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCA            >  SRR4302542.3868930/1‑94 (MQ=60)

                                                                                     AGCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAAC          >  SRR4302542.1337543/1‑94 (MQ=60)

                                                                                      GCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACA         >  SRR4302542.7498203/1‑94 (MQ=60)

                                                                                      GCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACA         <  SRR4302542.2279492/94‑1 (MQ=60)

                                                                                      GCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACA         >  SRR4302542.3283655/1‑94 (MQ=60)

                                                                                      GCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACA         <  SRR4302542.3070833/94‑1 (MQ=60)

                                                                                      GCCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACA         >  SRR4302542.4456898/1‑94 (MQ=60)

                                                                                       CCAGCAACGGATGCAACCCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACAG        <  SRR4302542.6205386/94‑1 (MQ=60)

                                                                                       CCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACAG        <  SRR4302542.5676863/94‑1 (MQ=60)

                                                                                       CCAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACAG        >  SRR4302542.2707228/1‑94 (MQ=60)

                                                                                        CAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACAGC       <  SRR4302542.7343259/94‑1 (MQ=60)

                                                                                        CAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACAGC       >  SRR4302542.6919545/1‑94 (MQ=60)

                                                                                        CAGCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACAGC       <  SRR4302542.853115/94‑1 (MQ=60)

                                                                                         AGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACAGCA      >  SRR4302542.4210425/1‑94 (MQ=60)

                                                                                          GCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACAGCAG     <  SRR4302542.4603879/94‑1 (MQ=60)

                                                                                          GCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACAGCAG     <  SRR4302542.7314208/94‑1 (MQ=60)

                                                                                          GCAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACAGCAG     <  SRR4302542.6415523/94‑1 (MQ=60)

                                                                                           CAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACAGCAGC    <  SRR4302542.2634275/94‑1 (MQ=60)

                                                                                           CAACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACAGCAGC    <  SRR4302542.2008243/94‑1 (MQ=60)

                                                                                            AACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACAGCAGCA   >  SRR4302542.934420/1‑94 (MQ=60)

                                                                                             ACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACAGCAGCAT  <  SRR4302542.744337/94‑1 (MQ=60)

                                                                                             ACGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACAGCAGCAT  <  SRR4302542.2817609/94‑1 (MQ=60)

TCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACAGCAGCAT  >  NC_000913/3584591‑3584777

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`