Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,598,512	A→G	intergenic (‑98/+147)	rpoH ← / ← ftsX	sigma(32) factor/cell division membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,598,512	0	A	G	80.9%	698.8 / 179.0	345	intergenic (‑98/+147)	rpoH/ftsX	sigma(32) factor/cell division membrane protein
Reads supporting (aligned to +/- strand): ref base A (34/32); new base G (136/143); total (170/175)
Fisher's exact test for biased strand distribution p-value = 7.84e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.51e-01

Only 100 of 346 total aligned reads displayed.

TCCTCTCAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGAGACAAC  >  NC_000913/3598420‑3598601

  ctctCAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGcc                                                                                         >  1:1682428/1‑93 (MQ=255)

  ctctCAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGcc                                                                                         >  2:2311858/1‑93 (MQ=255)

    ctcAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGt                                                                                       <  1:5684510/93‑1 (MQ=255)

    ctcAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGt                                                                                       <  1:1491364/93‑1 (MQ=255)

      cAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGa                                                                                     <  1:7169344/93‑1 (MQ=255)

       aaTCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGAt                                                                                    >  2:6727796/1‑93 (MQ=255)

       aaTCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGAt                                                                                    >  2:3494536/1‑93 (MQ=255)

         tCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGAttt                                                                                  <  2:1659590/93‑1 (MQ=255)

         tCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGAttt                                                                                  >  1:6916671/1‑93 (MQ=255)

         tCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGAttt                                                                                  <  1:7451606/93‑1 (MQ=255)

         tCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGAttt                                                                                  >  1:448928/1‑93 (MQ=255)

          cGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGAtttt                                                                                 <  1:7076372/93‑1 (MQ=255)

           gATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTa                                                                                <  2:171663/93‑1 (MQ=255)

           gATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTa                                                                                <  2:7457543/93‑1 (MQ=255)

            atatCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTAt                                                                               >  2:3109613/1‑93 (MQ=255)

            atatCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTAt                                                                               <  1:2731712/93‑1 (MQ=255)

            atatCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTAt                                                                               <  1:3241975/93‑1 (MQ=255)

            atatCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTAt                                                                               >  1:259985/1‑93 (MQ=255)

              atCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATcc                                                                             >  1:5736956/1‑93 (MQ=255)

              atCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATcc                                                                             <  1:4004077/93‑1 (MQ=255)

               tcttctGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCca                                                                            >  1:6229496/1‑93 (MQ=255)

                 ttctGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCcaca                                                                          >  2:4597664/1‑93 (MQ=255)

                 ttctGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCcaca                                                                          >  2:4746901/1‑93 (MQ=255)

                    tGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGt                                                                       >  2:3031221/1‑93 (MQ=255)

                    tGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGt                                                                       >  1:1154639/1‑93 (MQ=255)

                        gcTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCaa                                                                   <  2:1046422/93‑1 (MQ=255)

                        gcTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCaa                                                                   >  2:2518771/1‑93 (MQ=255)

                         cTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAAt                                                                  >  1:1562721/1‑93 (MQ=255)

                          ttCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATg                                                                 <  1:3913317/93‑1 (MQ=255)

                            cAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCa                                                               >  2:1497730/1‑93 (MQ=255)

                             aGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCaa                                                              >  1:7496353/1‑93 (MQ=255)

                              gTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAg                                                             >  1:5026160/1‑93 (MQ=255)

                              gTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAg                                                             <  2:2626512/93‑1 (MQ=255)

                               tGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGc                                                            >  1:5390485/1‑93 (MQ=255)

                                ggTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCt                                                           <  1:4748566/93‑1 (MQ=255)

                                 gTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCtt                                                          >  2:434296/1‑93 (MQ=255)

                                   aGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTtgt                                                        >  2:5763043/1‑93 (MQ=255)

                                    gCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTtgtg                                                       >  2:4943270/1‑93 (MQ=255)

                                       acaacTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAAt                                                    <  1:5548013/93‑1 (MQ=255)

                                       acaacTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAAt                                                    <  1:7233769/93‑1 (MQ=255)

                                        caacTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATa                                                   >  1:829211/1‑93 (MQ=255)

                                        caacTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATa                                                   <  1:260908/93‑1 (MQ=255)

                                         aacTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATaa                                                  <  2:4905900/93‑1 (MQ=255)

                                         aacTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATaa                                                  >  1:6531651/1‑93 (MQ=255)

                                          acTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATaaa                                                 <  1:1012601/93‑1 (MQ=255)

                                          acTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATaaa                                                 <  2:6807149/93‑1 (MQ=255)

                                           cTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAAt                                                <  1:6790049/93‑1 (MQ=255)

                                            tgtgCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAAtt                                               <  2:7257997/93‑1 (MQ=255)

                                             gtgCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTa                                              <  1:3395977/93‑1 (MQ=255)

                                              tgCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTAc                                             <  1:2127015/93‑1 (MQ=255)

                                                 cAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGca                                          <  2:401358/93‑1 (MQ=255)

                                                   gagCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGcaca                                        >  2:6489583/1‑93 (MQ=255)

                                                       ttAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAAt                                    <  2:620879/93‑1 (MQ=255)

                                                       ttAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAAt                                    >  2:6332712/1‑93 (MQ=255)

                                                       ttAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAAt                                    >  2:5597195/1‑93 (MQ=255)

                                                       ttAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAAt                                    >  2:1766044/1‑93 (MQ=255)

                                                         aaGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAAtgt                                  <  2:5713937/93‑1 (MQ=255)

                                                           gagCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGa                                >  1:578442/1‑93 (MQ=255)

                                                           gagCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGa                                >  1:7331015/1‑93 (MQ=255)

                                                             gCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACa                              >  2:1986327/1‑93 (MQ=255)

                                                             gCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACa                              >  2:1109357/1‑93 (MQ=255)

                                                               aaCGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATa                            <  1:1947360/93‑1 (MQ=255)

                                                               aaCGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATa                            <  2:5107828/93‑1 (MQ=255)

                                                               aaCGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATa                            >  2:2699180/1‑93 (MQ=255)

                                                               aaCGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATa                            >  1:4431272/1‑93 (MQ=255)

                                                               aaCGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATa                            >  2:3435787/1‑93 (MQ=255)

                                                               aaCGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATa                            <  2:1468234/93‑1 (MQ=255)

                                                                aCGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATag                           <  1:128332/93‑1 (MQ=255)

                                                                aCGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATag                           >  1:4965289/1‑93 (MQ=255)

                                                                 cGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATaga                          <  1:3003475/93‑1 (MQ=255)

                                                                  gAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATagag                         >  2:2407460/1‑93 (MQ=255)

                                                                  gAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATagag                         <  1:2427541/93‑1 (MQ=255)

                                                                  gAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATagag                         >  2:5891325/1‑93 (MQ=255)

                                                                   aGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAgaga                        <  2:5980145/93‑1 (MQ=255)

                                                                   aGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAgaga                        >  2:6973234/1‑93 (MQ=255)

                                                                   aGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAgaga                        <  2:3189224/93‑1 (MQ=255)

                                                                   aGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAgaga                        <  1:3649089/93‑1 (MQ=255)

                                                                   aGGTTATCATGCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAgaga                        <  2:6104097/93‑1 (MQ=255)

                                                                    ggTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGAt                       >  1:3724533/1‑93 (MQ=255)

                                                                     gTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATg                      >  1:2314111/1‑93 (MQ=255)

                                                                     gTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATg                      <  2:5454601/93‑1 (MQ=255)

                                                                      ttATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGa                     >  2:1196947/1‑93 (MQ=255)

                                                                        aTCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGaaa                   <  1:3175316/93‑1 (MQ=255)

                                                                         tCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAAt                  >  2:3707434/1‑93 (MQ=255)

                                                                          cATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATa                 <  1:1065787/93‑1 (MQ=255)

                                                                           aTTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATAc                >  1:2301850/1‑93 (MQ=255)

                                                                            ttCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATAcc               <  1:1349900/93‑1 (MQ=255)

                                                                            ttCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATAcc               <  1:6295017/93‑1 (MQ=255)

                                                                             tCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCg              <  1:861963/93‑1 (MQ=255)

                                                                             tCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCg              <  2:868058/93‑1 (MQ=255)

                                                                              cACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCgg             <  2:422520/93‑1 (MQ=255)

                                                                              cACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCgg             <  1:5998123/93‑1 (MQ=255)

                                                                               aCTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCggg            >  1:3447891/1‑93 (MQ=255)

                                                                               aCTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCggg            >  1:1824789/1‑93 (MQ=255)

                                                                               aCTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCggg            >  1:4309010/1‑93 (MQ=255)

                                                                                 tGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGaa          >  2:1254868/1‑93 (MQ=255)

                                                                                  gTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAag         >  1:6638265/1‑93 (MQ=255)

                                                                                   ttttATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAaga        >  2:394531/1‑93 (MQ=255)

                                                                                       aTCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGAGACa    >  1:3833076/1‑93 (MQ=255)

                                                                                        tCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGAGACaa   <  1:5279620/93‑1 (MQ=255)

TCCTCTCAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGAGACAAC  >  NC_000913/3598420‑3598601

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

ATCCTCTCAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGAGACAACGGGG  >  NC_000913/3598419‑3598605

ATCCTCTCAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGG                                                                                               <  SRR4302542.6325582/94‑1 (MQ=60)

ATCCTCTCAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGG                                                                                               <  SRR4302542.5777633/94‑1 (MQ=60)

ATCCTCTCAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGG                                                                                               >  SRR4302542.6782421/1‑94 (MQ=60)

ATCCTCTCAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGA                                                                                               >  SRR4302542.1607601/1‑94 (MQ=60)

  CCTCTCAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCC                                                                                             <  SRR4302542.264708/94‑1 (MQ=60)

  CCTCTCAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCC                                                                                             >  SRR4302542.1696982/1‑94 (MQ=60)

  CCTCTCAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGCTATCATTCACTGTTTTATCAGGCC                                                                                             >  SRR4302542.6131489/1‑94 (MQ=60)

   CTCTCAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCG                                                                                            <  SRR4302542.7450299/94‑1 (MQ=60)

    TCTCAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGT                                                                                           >  SRR4302542.7569632/1‑94 (MQ=60)

    TCTCAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGT                                                                                           <  SRR4302542.5659379/94‑1 (MQ=60)

     CTCAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTG                                                                                          <  SRR4302542.5739707/94‑1 (MQ=60)

     CTCAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTG                                                                                          >  SRR4302542.6233459/1‑94 (MQ=60)

     CTCAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTG                                                                                          <  SRR4302542.2634143/94‑1 (MQ=60)

     CTCAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTG                                                                                          <  SRR4302542.5069533/94‑1 (MQ=60)

     CTCAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTG                                                                                          <  SRR4302542.1504261/94‑1 (MQ=60)

       CAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGAT                                                                                        >  SRR4302542.2627012/1‑94 (MQ=60)

       CAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGAT                                                                                        <  SRR4302542.5822521/94‑1 (MQ=60)

       CAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGAT                                                                                        <  SRR4302542.7239665/94‑1 (MQ=60)

       CAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGAT                                                                                        >  SRR4302542.172003/1‑94 (MQ=60)

        AATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATT                                                                                       >  SRR4302542.574585/1‑94 (MQ=60)

        AATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATT                                                                                       <  SRR4302542.4504785/94‑1 (MQ=60)

        AATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATT                                                                                       >  SRR4302542.7228661/1‑94 (MQ=60)

        AATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATT                                                                                       >  SRR4302542.7073973/1‑94 (MQ=60)

         ATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTT                                                                                      >  SRR4302542.6984571/1‑94 (MQ=60)

         ATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTT                                                                                      >  SRR4302542.452810/1‑94 (MQ=60)

          TCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTT                                                                                     <  SRR4302542.7524572/94‑1 (MQ=60)

           CGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTA                                                                                    >  SRR4302542.2587495/1‑94 (MQ=60)

           CGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTA                                                                                    <  SRR4302542.7145819/94‑1 (MQ=60)

           CGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTA                                                                                    >  SRR4302542.1299302/1‑94 (MQ=60)

            GATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTAT                                                                                   <  SRR4302542.1477390/94‑1 (MQ=60)

            GATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTAT                                                                                   >  SRR4302542.7316235/1‑94 (MQ=60)

            GATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTAT                                                                                   <  SRR4302542.7422757/94‑1 (MQ=60)

            GATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTAT                                                                                   >  SRR4302542.4258039/1‑94 (MQ=60)

            GATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTAT                                                                                   >  SRR4302542.7556145/1‑94 (MQ=60)

            GATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTAT                                                                                   >  SRR4302542.262194/1‑94 (MQ=60)

            GATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTAT                                                                                   <  SRR4302542.2135462/94‑1 (MQ=60)

             ATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATC                                                                                  <  SRR4302542.4799598/94‑1 (MQ=60)

             ATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATC                                                                                  <  SRR4302542.2758070/94‑1 (MQ=60)

             ATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATC                                                                                  <  SRR4302542.3272620/94‑1 (MQ=60)

              TATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCC                                                                                 <  SRR4302542.6729732/94‑1 (MQ=60)

              TATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCC                                                                                 >  SRR4302542.5792659/1‑94 (MQ=60)

               ATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCA                                                                                >  SRR4302542.3789576/1‑94 (MQ=60)

               ATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCA                                                                                <  SRR4302542.4043564/94‑1 (MQ=60)

               ATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCA                                                                                >  SRR4302542.6290835/1‑94 (MQ=60)

               ATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCA                                                                                >  SRR4302542.6326722/1‑94 (MQ=60)

                TCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCAC                                                                               >  SRR4302542.1707855/1‑94 (MQ=60)

                  TTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAA                                                                             <  SRR4302542.6883839/94‑1 (MQ=60)

                  TTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAA                                                                             >  SRR4302542.3547347/1‑94 (MQ=60)

                   TCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAG                                                                            >  SRR4302542.1657155/1‑94 (MQ=60)

                   TCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAG                                                                            <  SRR4302542.3902094/94‑1 (MQ=60)

                   TCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAG                                                                            >  SRR4302542.4491526/1‑94 (MQ=60)

                    CTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGT                                                                           <  SRR4302542.7296840/94‑1 (MQ=60)

                    CTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGT                                                                           >  SRR4302542.1164535/1‑94 (MQ=60)

                       GCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCA                                                                        <  SRR4302542.1220233/94‑1 (MQ=60)

                         GCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAAT                                                                      >  SRR4302542.1576226/1‑94 (MQ=60)

                         GCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAAT                                                                      >  SRR4302542.1078414/1‑94 (MQ=60)

                         GCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAAT                                                                      <  SRR4302542.1476598/94‑1 (MQ=60)

                         GCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAAT                                                                      <  SRR4302542.5794413/94‑1 (MQ=60)

                          CTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATG                                                                     <  SRR4302542.733860/94‑1 (MQ=60)

                           TTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGC                                                                    >  SRR4302542.5083783/1‑94 (MQ=60)

                           TTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGC                                                                    <  SRR4302542.3951935/94‑1 (MQ=60)

                             CAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAA                                                                  >  SRR4302542.7569995/1‑94 (MQ=60)

                              AGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAG                                                                 >  SRR4302542.1572723/1‑94 (MQ=60)

                              AGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAG                                                                 >  SRR4302542.5074950/1‑94 (MQ=60)

                              AGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAG                                                                 >  SRR4302542.2318815/1‑94 (MQ=60)

                              AGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAG                                                                 <  SRR4302542.6676892/94‑1 (MQ=60)

                               GTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGC                                                                >  SRR4302542.5442839/1‑94 (MQ=60)

                               GTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGC                                                                <  SRR4302542.3868297/94‑1 (MQ=60)

                               GTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGC                                                                >  SRR4302542.3431408/1‑94 (MQ=60)

                                 GGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTT                                                              <  SRR4302542.4794843/94‑1 (MQ=60)

                                 GGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTT                                                              <  SRR4302542.2732719/94‑1 (MQ=60)

                                  GTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTG                                                             <  SRR4302542.4857387/94‑1 (MQ=60)

                                  GTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTG                                                             <  SRR4302542.3809256/94‑1 (MQ=60)

                                    AGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTG                                                           <  SRR4302542.4693103/94‑1 (MQ=60)

                                    AGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTG                                                           <  SRR4302542.1208494/94‑1 (MQ=60)

                                       AACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAAT                                                        <  SRR4302542.3909033/94‑1 (MQ=60)

                                       AACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAAT                                                        <  SRR4302542.512358/94‑1 (MQ=60)

                                       AACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAAT                                                        <  SRR4302542.232329/94‑1 (MQ=60)

                                       AACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAAT                                                        <  SRR4302542.5224436/94‑1 (MQ=60)

                                        ACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATA                                                       <  SRR4302542.5601928/94‑1 (MQ=60)

                                        ACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATA                                                       <  SRR4302542.7304725/94‑1 (MQ=60)

                                        ACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATA                                                       >  SRR4302542.836373/1‑94 (MQ=60)

                                        ACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATA                                                       >  SRR4302542.6417227/1‑94 (MQ=60)

                                        ACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATA                                                       <  SRR4302542.5994540/94‑1 (MQ=60)

                                         CAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAA                                                      <  SRR4302542.263126/94‑1 (MQ=60)

                                         CAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAA                                                      >  SRR4302542.6596033/1‑94 (MQ=60)

                                          AACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAA                                                     >  SRR4302542.7167304/1‑94 (MQ=60)

                                          AACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAA                                                     <  SRR4302542.2784168/94‑1 (MQ=60)

                                           ACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAAT                                                    <  SRR4302542.1021323/94‑1 (MQ=60)

                                            CTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATT                                                   <  SRR4302542.6856828/94‑1 (MQ=60)

                                              GTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTAC                                                 <  SRR4302542.3427838/94‑1 (MQ=60)

                                              GGGCCAGAGCTTAAGAGCAACGAGGTTATCATTCCCTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTAC                                                 <  SRR4302542.3427839/94‑1 (MQ=60)

                                               TGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACG                                                >  SRR4302542.2729807/1‑94 (MQ=60)

                                               TGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACG                                                <  SRR4302542.844563/94‑1 (MQ=60)

                                               TGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACG                                                <  SRR4302542.2145365/94‑1 (MQ=60)

                                                 CCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCA                                              >  SRR4302542.6813400/1‑94 (MQ=60)

                                                 CCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCA                                              >  SRR4302542.3257964/1‑94 (MQ=60)

                                                  CAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCAC                                             >  SRR4302542.552481/1‑94 (MQ=60)

                                                  CAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCAC                                             >  SRR4302542.3531814/1‑94 (MQ=60)

                                                     AGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAA                                          <  SRR4302542.3189774/94‑1 (MQ=60)

                                                      GCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAA                                         >  SRR4302542.1531795/1‑94 (MQ=60)

                                                      GCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAA                                         <  SRR4302542.7282630/94‑1 (MQ=60)

                                                       CTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAAT                                        >  SRR4302542.6423100/1‑94 (MQ=60)

                                                       CTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAAT                                        <  SRR4302542.4463852/94‑1 (MQ=60)

                                                       CTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAAT                                        <  SRR4302542.1085483/94‑1 (MQ=60)

                                                        TTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATG                                       <  SRR4302542.2095923/94‑1 (MQ=60)

                                                        TTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATG                                       <  SRR4302542.1036485/94‑1 (MQ=60)

                                                        TTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATG                                       <  SRR4302542.1188011/94‑1 (MQ=60)

                                                         TAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGT                                      <  SRR4302542.7017560/94‑1 (MQ=60)

                                                          AAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTG                                     <  SRR4302542.3750019/94‑1 (MQ=60)

                                                           AGAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGA                                    >  SRR4302542.583451/1‑94 (MQ=60)

                                                           AGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGA                                    >  SRR4302542.7402829/1‑94 (MQ=60)

                                                            GAGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGAC                                   <  SRR4302542.5516496/94‑1 (MQ=60)

                                                             AGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACA                                  <  SRR4302542.1074305/94‑1 (MQ=60)

                                                             AGCAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACA                                  >  SRR4302542.187007/1‑94 (MQ=60)

                                                              GCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACAT                                 >  SRR4302542.3984066/1‑94 (MQ=60)

                                                               CAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATA                                <  SRR4302542.372493/94‑1 (MQ=60)

                                                               CAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATA                                <  SRR4302542.6762215/94‑1 (MQ=60)

                                                               CAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATA                                <  SRR4302542.2547073/94‑1 (MQ=60)

                                                               CAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATA                                >  SRR4302542.6195970/1‑94 (MQ=60)

                                                               CAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATA                                >  SRR4302542.4474782/1‑94 (MQ=60)

                                                               CAACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATA                                <  SRR4302542.5779170/94‑1 (MQ=60)

                                                                AACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAG                               >  SRR4302542.1951870/1‑94 (MQ=60)

                                                                AACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAG                               <  SRR4302542.1964203/94‑1 (MQ=60)

                                                                AACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAG                               >  SRR4302542.5013504/1‑94 (MQ=60)

                                                                AACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATATGACATAG                               <  SRR4302542.858868/94‑1 (MQ=60)

                                                                 ACGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGA                              <  SRR4302542.129380/94‑1 (MQ=60)

                                                                  CGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAG                             >  SRR4302542.1352435/1‑94 (MQ=60)

                                                                  CGAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAG                             <  SRR4302542.3032201/94‑1 (MQ=60)

                                                                   GAGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGA                            <  SRR4302542.2451145/94‑1 (MQ=60)

                                                                   GAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGA                            <  SRR4302542.7582128/94‑1 (MQ=60)

                                                                    AGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGAT                           >  SRR4302542.3761415/1‑94 (MQ=60)

                                                                    AGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGAT                           <  SRR4302542.3683166/94‑1 (MQ=60)

                                                                    AGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGAT                           >  SRR4302542.1666461/1‑94 (MQ=60)

                                                                    AGGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGAT                           >  SRR4302542.851371/1‑94 (MQ=60)

                                                                     GGTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG                          >  SRR4302542.2333972/1‑94 (MQ=60)

                                                                      GTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA                         <  SRR4302542.6301641/94‑1 (MQ=60)

                                                                      GTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA                         >  SRR4302542.4475445/1‑94 (MQ=60)

                                                                      GTTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA                         <  SRR4302542.916925/94‑1 (MQ=60)

                                                                       TTATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAA                        >  SRR4302542.5007576/1‑94 (MQ=60)

                                                                        TATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAA                       <  SRR4302542.2176865/94‑1 (MQ=60)

                                                                        TATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAA                       >  SRR4302542.1393007/1‑94 (MQ=60)

                                                                        TATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAA                       <  SRR4302542.3088414/94‑1 (MQ=60)

                                                                         ATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAAT                      <  SRR4302542.3205420/94‑1 (MQ=60)

                                                                         ATCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAAT                      <  SRR4302542.2945377/94‑1 (MQ=60)

                                                                          TCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATA                     >  SRR4302542.327652/1‑94 (MQ=60)

                                                                          TCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATA                     <  SRR4302542.7277223/94‑1 (MQ=60)

                                                                          TCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATA                     >  SRR4302542.3312180/1‑94 (MQ=60)

                                                                          TCATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATA                     <  SRR4302542.2734053/94‑1 (MQ=60)

                                                                           CATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATAC                    <  SRR4302542.1074946/94‑1 (MQ=60)

                                                                           CATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATAC                    >  SRR4302542.3332233/1‑94 (MQ=60)

                                                                           CATTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATAC                    <  SRR4302542.3980338/94‑1 (MQ=60)

                                                                           CATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATAC                    >  SRR4302542.2321628/1‑94 (MQ=60)

                                                                             TTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCG                  <  SRR4302542.7589263/94‑1 (MQ=60)

                                                                             TTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCG                  <  SRR4302542.2334961/94‑1 (MQ=60)

                                                                             TTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCG                  <  SRR4302542.5511954/94‑1 (MQ=60)

                                                                             TTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCG                  <  SRR4302542.1361559/94‑1 (MQ=60)

                                                                             TTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCG                  <  SRR4302542.438353/94‑1 (MQ=60)

                                                                             TTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCG                  <  SRR4302542.5775734/94‑1 (MQ=60)

                                                                             TTCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCG                  >  SRR4302542.2332871/1‑94 (MQ=60)

                                                                             TTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCG                  >  SRR4302542.4288447/1‑94 (MQ=60)

                                                                             TTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCG                  <  SRR4302542.6357040/94‑1 (MQ=60)

                                                                              TCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGTATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGG                 <  SRR4302542.2248372/94‑1 (MQ=60)

                                                                              TCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGG                 >  SRR4302542.2447737/1‑94 (MQ=60)

                                                                              TCACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGG                 <  SRR4302542.869382/94‑1 (MQ=60)

                                                                               CACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGG                <  SRR4302542.5641630/94‑1 (MQ=60)

                                                                               CACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGG                <  SRR4302542.6056214/94‑1 (MQ=60)

                                                                               CACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGG                >  SRR4302542.1840588/1‑94 (MQ=60)

                                                                               CACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGG                <  SRR4302542.534034/94‑1 (MQ=60)

                                                                               CACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGG                >  SRR4302542.3480151/1‑94 (MQ=60)

                                                                               CACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGG                <  SRR4302542.4590551/94‑1 (MQ=60)

                                                                               CACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGG                >  SRR4302542.4351366/1‑94 (MQ=60)

                                                                                ACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGA               >  SRR4302542.3645848/1‑94 (MQ=60)

                                                                                ACTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGA               >  SRR4302542.5379840/1‑94 (MQ=60)

                                                                                ACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGA               >  SRR4302542.6663604/1‑94 (MQ=60)

                                                                                 CTGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAA              >  SRR4302542.5909140/1‑94 (MQ=60)

                                                                                  TGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAG             >  SRR4302542.6703694/1‑94 (MQ=60)

                                                                                  TGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAG             <  SRR4302542.5064156/94‑1 (MQ=60)

                                                                                  TGTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAG             <  SRR4302542.7412480/94‑1 (MQ=60)

                                                                                   GTTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGA            <  SRR4302542.695649/94‑1 (MQ=60)

                                                                                    TTTTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGAG           <  SRR4302542.6986567/94‑1 (MQ=60)

                                                                                    TTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGAG           >  SRR4302542.924032/1‑94 (MQ=60)

                                                                                      TTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGAGAC         <  SRR4302542.3242158/94‑1 (MQ=60)

                                                                                      TTATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGAGAC         >  SRR4302542.1897300/1‑94 (MQ=60)

                                                                                       TATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGAGACA        >  SRR4302542.3870984/1‑94 (MQ=60)

                                                                                       TATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGAGACA        >  SRR4302542.2621176/1‑94 (MQ=60)

                                                                                        ATCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGAGACAA       >  SRR4302542.4155356/1‑94 (MQ=60)

                                                                                         TCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGAGACAAC      <  SRR4302542.5330957/94‑1 (MQ=60)

                                                                                         TCAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGAGACAAC      <  SRR4302542.6545969/94‑1 (MQ=60)

                                                                                          CAGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGAGACAACG     <  SRR4302542.3161013/94‑1 (MQ=60)

                                                                                           AGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGAGACAACGG    <  SRR4302542.5734189/94‑1 (MQ=60)

                                                                                           AGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGAGACAACGG    >  SRR4302542.7178662/1‑94 (MQ=60)

                                                                                           AGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGAGACAACGG    >  SRR4302542.3606334/1‑94 (MQ=60)

                                                                                           AGGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGAGACAACGG    >  SRR4302542.2895802/1‑94 (MQ=60)

                                                                                            GGCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGAGACAACGGG   <  SRR4302542.325574/94‑1 (MQ=60)

                                                                                             GCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGAGACAACGGGG  <  SRR4302542.5400007/94‑1 (MQ=60)

                                                                                             GCCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGAGACAACGGGG  >  SRR4302542.2503988/1‑94 (MQ=60)

ATCCTCTCAATCGATATCTTCTGGCGCTTCAGTGGTAGCAACAACTGTGCCAGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAAATACCGGGAAGAGACAACGGGG  >  NC_000913/3598419‑3598605

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`