Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,629,183 T→C K346K (AAA→AAG)  yhiJ ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,629,1830TC82.7% 778.8 / 154.6 352K346K (AAA→AAG) yhiJhypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (34/27);  new base C (145/146);  total (179/173)
Fisher's exact test for biased strand distribution p-value = 4.82e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.58e-01

Only 100 of 354 total aligned reads displayed.

TCCCATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATACTCATTA  >  NC_000913/3629092‑3629274
                                                                                           |                                                                                           
tCCCATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGtt                                                                                            <  1:4131649/93‑1 (MQ=255)
  ccATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTc                                                                                          >  2:7504550/1‑93 (MQ=255)
   cATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCa                                                                                         >  1:654849/1‑93 (MQ=255)
   cATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCa                                                                                         >  2:5321048/1‑93 (MQ=255)
   cATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCa                                                                                         <  1:3862341/93‑1 (MQ=255)
   cATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCa                                                                                         <  1:3722927/93‑1 (MQ=255)
   cATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCa                                                                                         >  2:177747/1‑93 (MQ=255)
    atgatgATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCAt                                                                                        >  1:2898279/1‑93 (MQ=255)
     tgatgaTTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATa                                                                                       <  2:1028880/93‑1 (MQ=255)
     tgatgaTTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATa                                                                                       >  2:4751753/1‑93 (MQ=255)
     tgatgaTTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATa                                                                                       >  1:7309077/1‑93 (MQ=255)
     tgatgaTTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATa                                                                                       <  1:744194/93‑1 (MQ=255)
      gatgatTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATAc                                                                                      <  2:7097012/93‑1 (MQ=255)
      gatgatTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATAc                                                                                      >  2:4567696/1‑93 (MQ=255)
       atgatTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATAcg                                                                                     <  2:5657187/93‑1 (MQ=255)
        tgatTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATAcgc                                                                                    >  1:4185640/1‑93 (MQ=255)
         gatTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATAcgcg                                                                                   <  2:6559967/93‑1 (MQ=255)
          atTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGt                                                                                  <  2:3724608/93‑1 (MQ=255)
          atTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGt                                                                                  >  1:1561606/1‑93 (MQ=255)
          atTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGt                                                                                  <  1:7509870/93‑1 (MQ=255)
           tttGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTg                                                                                 <  1:4077233/93‑1 (MQ=255)
            ttGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGa                                                                                >  1:5745794/1‑93 (MQ=255)
              gCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCGGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAg                                                                              >  2:1236751/1‑93 (MQ=255)
               ccATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGt                                                                             >  2:3096065/1‑93 (MQ=255)
                cATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGtt                                                                            >  2:2066531/1‑93 (MQ=255)
                cATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGtt                                                                            <  2:6050345/93‑1 (MQ=255)
                 attattTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTc                                                                           <  1:3018936/93‑1 (MQ=255)
                    attTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGc                                                                        <  1:6868976/93‑1 (MQ=255)
                     ttttGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCa                                                                       >  1:1094261/1‑93 (MQ=255)
                      tttGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCat                                                                      <  1:6639568/93‑1 (MQ=255)
                       ttGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCata                                                                     <  2:5442010/93‑1 (MQ=255)
                            tttGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGtt                                                                >  1:1687437/1‑93 (MQ=255)
                            tttGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGtt                                                                <  1:3931161/93‑1 (MQ=255)
                                gggTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCa                                                            <  2:4232653/93‑1 (MQ=255)
                                gggTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCa                                                            >  1:487639/1‑93 (MQ=255)
                                 ggTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCAt                                                           <  1:6939060/93‑1 (MQ=255)
                                  gTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCAtt                                                          <  1:2106256/93‑1 (MQ=255)
                                   tCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTg                                                         >  1:5625741/1‑93 (MQ=255)
                                   tCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTTAAGTTCTGTATATAGTTACCAttc                                                         >  2:7317195/1‑92 (MQ=255)
                                   tCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTg                                                         >  2:5044512/1‑93 (MQ=255)
                                      tAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCaa                                                      >  1:2285292/1‑93 (MQ=255)
                                      tAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCaa                                                      <  2:2752306/93‑1 (MQ=255)
                                      tAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCaa                                                      >  1:705947/1‑93 (MQ=255)
                                       aGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAAt                                                     >  1:6801452/1‑93 (MQ=255)
                                       aGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAAt                                                     <  2:5490944/93‑1 (MQ=255)
                                        gAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAAtt                                                    >  1:566263/1‑93 (MQ=255)
                                        gAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAAtt                                                    <  1:6744718/93‑1 (MQ=255)
                                         aaaCATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTc                                                   <  2:625143/93‑1 (MQ=255)
                                          aaCATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCg                                                  <  1:4982205/93‑1 (MQ=255)
                                          aaCATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCg                                                  <  1:5315277/93‑1 (MQ=255)
                                            cATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGtt                                                <  2:452492/93‑1 (MQ=255)
                                             aTACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGttt                                               <  1:3281771/93‑1 (MQ=255)
                                              tACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTc                                              <  1:6262853/93‑1 (MQ=255)
                                              tACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTc                                              >  1:4673791/1‑93 (MQ=255)
                                               aCAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCa                                             <  1:1247119/93‑1 (MQ=255)
                                               aCAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCa                                             <  2:5825986/93‑1 (MQ=255)
                                                 aGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATg                                           <  1:1927086/93‑1 (MQ=255)
                                                  ggATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGa                                          >  1:1369001/1‑93 (MQ=255)
                                                  ggATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGa                                          <  2:1682074/93‑1 (MQ=255)
                                                  ggATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGa                                          >  2:4843363/1‑93 (MQ=255)
                                                     tAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGAttt                                       >  2:926757/1‑93 (MQ=255)
                                                        tCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCa                                    >  2:3245165/1‑93 (MQ=255)
                                                         cTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAg                                   <  2:3970420/93‑1 (MQ=255)
                                                          ttttATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGc                                  >  1:1008581/1‑93 (MQ=255)
                                                          ttttATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGc                                  >  1:366646/1‑93 (MQ=255)
                                                           tttATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTCCCATTGCAATTCGTTTCATGATTTCCAGCt                                 <  1:2811503/93‑1 (MQ=255)
                                                           tttATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCt                                 <  2:2387894/93‑1 (MQ=255)
                                                            ttATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTa                                >  1:4418488/1‑93 (MQ=255)
                                                              aTCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAAt                              >  1:1492031/1‑93 (MQ=255)
                                                                 ccAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACa                           <  2:1564380/93‑1 (MQ=255)
                                                                 ccAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACa                           >  1:2001029/1‑93 (MQ=255)
                                                                   agagTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATg                         <  1:5942143/93‑1 (MQ=255)
                                                                    gagTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGa                        >  2:3178712/1‑93 (MQ=255)
                                                                    gagTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGa                        <  1:6354393/93‑1 (MQ=255)
                                                                     agTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGaa                       >  1:5261446/1‑93 (MQ=255)
                                                                     agTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGaa                       <  1:2705684/93‑1 (MQ=255)
                                                                      gTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAAc                      <  2:7367852/93‑1 (MQ=255)
                                                                       tAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACa                     >  1:1762249/1‑93 (MQ=255)
                                                                        aGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACAt                    <  2:2548019/93‑1 (MQ=255)
                                                                          gTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACAttt                  <  2:1930084/93‑1 (MQ=255)
                                                                          gTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACAttt                  <  2:688808/93‑1 (MQ=255)
                                                                          gTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACAttt                  >  1:914790/1‑93 (MQ=255)
                                                                           tATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACAtttt                 >  1:5433793/1‑93 (MQ=255)
                                                                            aTCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTc                <  2:6983352/93‑1 (MQ=255)
                                                                            aTCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTc                >  2:5997835/1‑93 (MQ=255)
                                                                             tCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCa               <  2:141363/93‑1 (MQ=255)
                                                                             tCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCa               <  1:883027/93‑1 (MQ=255)
                                                                             tCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCa               >  2:1743363/1‑93 (MQ=255)
                                                                             tCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCa               >  2:3396396/1‑93 (MQ=255)
                                                                                tCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTg            >  1:2390953/1‑93 (MQ=255)
                                                                                tCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTg            >  1:5149702/1‑93 (MQ=255)
                                                                                 cATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGa           <  2:3494674/93‑1 (MQ=255)
                                                                                  aTCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGAt          <  2:2356611/93‑1 (MQ=255)
                                                                                  aTCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACACGAACATTTTCATTGAt          >  1:3345961/1‑93 (MQ=255)
                                                                                   tCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATa         >  2:2982736/1‑93 (MQ=255)
                                                                                   tCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATa         <  1:5821757/93‑1 (MQ=255)
                                                                                      aGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATACTc      >  2:671053/1‑93 (MQ=255)
                                                                                       gTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATACTCa     >  2:7240903/1‑93 (MQ=255)
                                                                                          gTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATACTCATTa  <  2:2213577/93‑1 (MQ=255)
                                                                                          gTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATACTCATTa  <  2:7310150/93‑1 (MQ=255)
                                                                                           |                                                                                           
TCCCATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATACTCATTA  >  NC_000913/3629092‑3629274

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TATCCCATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATACTCATTATG  >  NC_000913/3629090‑3629276
                                                                                             |                                                                                             
TATCCCATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGC                                                                                               >  SRR4302542.509396/1‑94 (MQ=60)
 ATCCCATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCT                                                                                              >  SRR4302542.986436/1‑94 (MQ=60)
 ATCCCATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCT                                                                                              >  SRR4302542.3473754/1‑94 (MQ=60)
  TCCCATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTT                                                                                             <  SRR4302542.4172356/94‑1 (MQ=60)
  TCCCATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTT                                                                                             >  SRR4302542.2580955/1‑94 (MQ=60)
  TCCCATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTT                                                                                             <  SRR4302542.496096/94‑1 (MQ=60)
    CCATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCA                                                                                           >  SRR4302542.660501/1‑94 (MQ=60)
    CCATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCA                                                                                           >  SRR4302542.3305438/1‑94 (MQ=60)
    CCATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCA                                                                                           >  SRR4302542.7536325/1‑94 (MQ=60)
    CCATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCA                                                                                           <  SRR4302542.589400/94‑1 (MQ=60)
    CCATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCA                                                                                           >  SRR4302542.2376753/1‑94 (MQ=60)
     CATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCAT                                                                                          >  SRR4302542.5077243/1‑94 (MQ=60)
     CATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCAT                                                                                          <  SRR4302542.3759799/94‑1 (MQ=60)
     CATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCAT                                                                                          >  SRR4302542.2926090/1‑94 (MQ=60)
     CATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCAT                                                                                          <  SRR4302542.3900482/94‑1 (MQ=60)
     CATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCAT                                                                                          >  SRR4302542.1899476/1‑94 (MQ=60)
      ATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATA                                                                                         >  SRR4302542.2254949/1‑94 (MQ=60)
      ATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATA                                                                                         >  SRR4302542.5829565/1‑94 (MQ=60)
      ATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATA                                                                                         >  SRR4302542.7380672/1‑94 (MQ=60)
       TGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATAC                                                                                        <  SRR4302542.6662858/94‑1 (MQ=60)
       TGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATAC                                                                                        <  SRR4302542.5771982/94‑1 (MQ=60)
       TGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATAC                                                                                        <  SRR4302542.3302688/94‑1 (MQ=60)
       TGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATAC                                                                                        <  SRR4302542.750641/94‑1 (MQ=60)
         ATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGC                                                                                      >  SRR4302542.4226921/1‑94 (MQ=60)
         ATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGC                                                                                      <  SRR4302542.4742692/94‑1 (MQ=60)
           GATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGT                                                                                    >  SRR4302542.1575103/1‑94 (MQ=60)
            ATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTG                                                                                   <  SRR4302542.7583731/94‑1 (MQ=60)
             TTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGA                                                                                  >  SRR4302542.5801572/1‑94 (MQ=60)
             TTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGA                                                                                  <  SRR4302542.4117418/94‑1 (MQ=60)
               TGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAG                                                                                >  SRR4302542.5363771/1‑94 (MQ=60)
               TGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAG                                                                                <  SRR4302542.3329377/94‑1 (MQ=60)
               TGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAG                                                                                <  SRR4302542.4905267/94‑1 (MQ=60)
                GCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGT                                                                               >  SRR4302542.1341978/1‑94 (MQ=60)
                 CCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTT                                                                              >  SRR4302542.7015692/1‑94 (MQ=60)
                  CATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTC                                                                             >  SRR4302542.6011782/1‑94 (MQ=60)
                  CATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTC                                                                             >  SRR4302542.4102304/1‑94 (MQ=60)
                  CATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTC                                                                             <  SRR4302542.2070958/94‑1 (MQ=60)
                  CATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTC                                                                             <  SRR4302542.4985680/94‑1 (MQ=60)
                   ATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCT                                                                            <  SRR4302542.3047774/94‑1 (MQ=60)
                   ATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCT                                                                            <  SRR4302542.4076400/94‑1 (MQ=60)
                   ATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCT                                                                            >  SRR4302542.1859549/1‑94 (MQ=60)
                   ATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCT                                                                            <  SRR4302542.922643/94‑1 (MQ=60)
                   ATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCT                                                                            <  SRR4302542.4969700/94‑1 (MQ=60)
                   ATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCT                                                                            >  SRR4302542.6166800/1‑94 (MQ=60)
                     TATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGC                                                                          <  SRR4302542.5728579/94‑1 (MQ=60)
                     TATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGC                                                                          >  SRR4302542.3938049/1‑94 (MQ=60)
                      ATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCA                                                                         >  SRR4302542.1103636/1‑94 (MQ=60)
                      ATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCA                                                                         <  SRR4302542.3858016/94‑1 (MQ=60)
                      ATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCA                                                                         <  SRR4302542.6936451/94‑1 (MQ=60)
                      ATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCA                                                                         <  SRR4302542.7569185/94‑1 (MQ=60)
                       TTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCAT                                                                        >  SRR4302542.1092790/1‑94 (MQ=60)
                        TTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATA                                                                       >  SRR4302542.4293935/1‑94 (MQ=60)
                        TTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATA                                                                       <  SRR4302542.866310/94‑1 (MQ=60)
                        TTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATA                                                                       <  SRR4302542.4036645/94‑1 (MQ=60)
                        TTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATA                                                                       <  SRR4302542.6705011/94‑1 (MQ=60)
                         TTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATAT                                                                      <  SRR4302542.899507/94‑1 (MQ=60)
                           GTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAG                                                                    <  SRR4302542.1583505/94‑1 (MQ=60)
                           GTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAG                                                                    >  SRR4302542.4877280/1‑94 (MQ=60)
                           GTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAG                                                                    >  SRR4302542.7495837/1‑94 (MQ=60)
                            TATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGT                                                                   <  SRR4302542.5226619/94‑1 (MQ=60)
                            TATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGT                                                                   >  SRR4302542.2750911/1‑94 (MQ=60)
                             ATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTT                                                                  >  SRR4302542.1702047/1‑94 (MQ=60)
                             ATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTT                                                                  <  SRR4302542.5777135/94‑1 (MQ=60)
                             ATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTT                                                                  >  SRR4302542.6462942/1‑94 (MQ=60)
                             ATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTT                                                                  >  SRR4302542.2153720/1‑94 (MQ=60)
                             ATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTT                                                                  <  SRR4302542.3477888/94‑1 (MQ=60)
                              TTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTA                                                                 >  SRR4302542.6782543/1‑94 (MQ=60)
                              TTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTA                                                                 <  SRR4302542.3969952/94‑1 (MQ=60)
                               TTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTAC                                                                >  SRR4302542.5888479/1‑94 (MQ=60)
                                TGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACC                                                               >  SRR4302542.6771616/1‑94 (MQ=60)
                                TGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACC                                                               <  SRR4302542.3624907/94‑1 (MQ=60)
                                 GGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCA                                                              >  SRR4302542.3033647/1‑94 (MQ=60)
                                 GGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCA                                                              >  SRR4302542.491855/1‑94 (MQ=60)
                                 GGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCA                                                              >  SRR4302542.122024/1‑94 (MQ=60)
                                   GGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATT                                                            >  SRR4302542.725544/1‑94 (MQ=60)
                                   GGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATT                                                            <  SRR4302542.7007231/94‑1 (MQ=60)
                                    GTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTG                                                           >  SRR4302542.5680371/1‑94 (MQ=60)
                                    GTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTG                                                           <  SRR4302542.2124435/94‑1 (MQ=60)
                                       ATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAA                                                        >  SRR4302542.2304929/1‑94 (MQ=60)
                                       ATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAA                                                        >  SRR4302542.6987124/1‑94 (MQ=60)
                                       ATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAA                                                        >  SRR4302542.712055/1‑94 (MQ=60)
                                       ATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAA                                                        >  SRR4302542.1578974/1‑94 (MQ=60)
                                       ATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAA                                                        >  SRR4302542.1542225/1‑94 (MQ=60)
                                       ATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAA                                                        >  SRR4302542.4160612/1‑94 (MQ=60)
                                        TAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAAT                                                       >  SRR4302542.6868325/1‑94 (MQ=60)
                                        TAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAAT                                                       <  SRR4302542.258251/94‑1 (MQ=60)
                                         AGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATT                                                      <  SRR4302542.1041744/94‑1 (MQ=60)
                                         AGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATT                                                      >  SRR4302542.6536571/1‑94 (MQ=60)
                                         AGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATT                                                      >  SRR4302542.897921/1‑94 (MQ=60)
                                         AGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATT                                                      >  SRR4302542.571135/1‑94 (MQ=60)
                                         AGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATT                                                      <  SRR4302542.2063109/94‑1 (MQ=60)
                                          GAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTCCTGCATATAGTTACCATTGCAATTC                                                     >  SRR4302542.6870805/1‑94 (MQ=60)
                                          GAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTC                                                     >  SRR4302542.6685594/1‑94 (MQ=60)
                                          GAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTC                                                     <  SRR4302542.6811090/94‑1 (MQ=60)
                                            AACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGT                                                   <  SRR4302542.5030560/94‑1 (MQ=60)
                                            AACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGT                                                   <  SRR4302542.5366918/94‑1 (MQ=60)
                                             ACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTT                                                  <  SRR4302542.1755315/94‑1 (MQ=60)
                                              CATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTT                                                 <  SRR4302542.6926201/94‑1 (MQ=60)
                                               ATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTC                                                <  SRR4302542.3312730/94‑1 (MQ=60)
                                               ATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTC                                                >  SRR4302542.4719463/1‑94 (MQ=60)
                                               ATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTC                                                >  SRR4302542.7415957/1‑94 (MQ=60)
                                                TACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCA                                               <  SRR4302542.6324566/94‑1 (MQ=60)
                                                 ACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCAT                                              <  SRR4302542.6579808/94‑1 (MQ=60)
                                                 ACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCAT                                              <  SRR4302542.1257839/94‑1 (MQ=60)
                                                  CAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATG                                             >  SRR4302542.1716565/1‑94 (MQ=60)
                                                  CAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATG                                             <  SRR4302542.2574623/94‑1 (MQ=60)
                                                   AGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGA                                            >  SRR4302542.1380835/1‑94 (MQ=60)
                                                   AGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGA                                            <  SRR4302542.1943732/94‑1 (MQ=60)
                                                   AGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGA                                            <  SRR4302542.5203187/94‑1 (MQ=60)
                                                   AGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGA                                            <  SRR4302542.5346341/94‑1 (MQ=60)
                                                   AGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGA                                            >  SRR4302542.3872759/1‑94 (MQ=60)
                                                   AGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGA                                            >  SRR4302542.4328086/1‑94 (MQ=60)
                                                    GGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGAT                                           <  SRR4302542.2049205/94‑1 (MQ=60)
                                                    GGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGAT                                           >  SRR4302542.4218984/1‑94 (MQ=60)
                                                       TAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTC                                        >  SRR4302542.1252035/1‑94 (MQ=60)
                                                       TAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTC                                        >  SRR4302542.4189231/1‑94 (MQ=60)
                                                         ATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCA                                      >  SRR4302542.5595829/1‑94 (MQ=60)
                                                         ATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCA                                      >  SRR4302542.2384542/1‑94 (MQ=60)
                                                         ATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCA                                      >  SRR4302542.6737340/1‑94 (MQ=60)
                                                         ATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCA                                      <  SRR4302542.2013187/94‑1 (MQ=60)
                                                         ATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCA                                      <  SRR4302542.6863405/94‑1 (MQ=60)
                                                          TCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAG                                     <  SRR4302542.2403988/94‑1 (MQ=60)
                                                           CTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGC                                    >  SRR4302542.1017265/1‑94 (MQ=60)
                                                           CTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGC                                    >  SRR4302542.369832/1‑94 (MQ=60)
                                                           CTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGC                                    >  SRR4302542.4361443/1‑94 (MQ=60)
                                                            TTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCT                                   <  SRR4302542.2975218/94‑1 (MQ=60)
                                                            TTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCT                                   <  SRR4302542.5681518/94‑1 (MQ=60)
                                                            TTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCT                                   <  SRR4302542.5681519/94‑1 (MQ=60)
                                                            TTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCT                                   <  SRR4302542.7208597/94‑1 (MQ=60)
                                                            TTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCT                                   >  SRR4302542.6985492/1‑94 (MQ=60)
                                                            TTTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCT                                   <  SRR4302542.7066963/94‑1 (MQ=60)
                                                             TTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTCCCATTGCAATTCGTTTCATGATTTCCAGCTA                                  <  SRR4302542.2838562/94‑1 (MQ=60)
                                                             TTTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTA                                  >  SRR4302542.4461886/1‑94 (MQ=60)
                                                              TTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAA                                 >  SRR4302542.5167803/1‑94 (MQ=60)
                                                              TTATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAA                                 >  SRR4302542.2881072/1‑94 (MQ=60)
                                                               TATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAAT                                <  SRR4302542.3848336/94‑1 (MQ=60)
                                                               TATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAAT                                >  SRR4302542.1504933/1‑94 (MQ=60)
                                                               TATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAAT                                <  SRR4302542.1409310/94‑1 (MQ=60)
                                                               TATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAAT                                <  SRR4302542.2917300/94‑1 (MQ=60)
                                                                ATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATCTAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATA                               <  SRR4302542.7579595/94‑1 (MQ=60)
                                                                ATCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATA                               <  SRR4302542.3273557/94‑1 (MQ=60)
                                                                 TCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATAC                              <  SRR4302542.1163564/94‑1 (MQ=60)
                                                                 TCCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATAC                              <  SRR4302542.3949960/94‑1 (MQ=60)
                                                                  CCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACA                             >  SRR4302542.982818/1‑94 (MQ=60)
                                                                  CCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACA                             >  SRR4302542.2018306/1‑94 (MQ=60)
                                                                  CCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACA                             <  SRR4302542.1506421/94‑1 (MQ=60)
                                                                  CCCAGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACA                             >  SRR4302542.548243/1‑94 (MQ=60)
                                                                   CCTGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACAT                            <  SRR4302542.3708963/94‑1 (MQ=60)
                                                                    CAGAGTAGGTATCCTCACCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATG                           >  SRR4302542.6239901/1‑94 (MQ=60)
                                                                     AGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGA                          <  SRR4302542.5999708/94‑1 (MQ=60)
                                                                     AGAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGA                          >  SRR4302542.5841571/1‑94 (MQ=60)
                                                                      GAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAA                         <  SRR4302542.6416983/94‑1 (MQ=60)
                                                                      GAGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAA                         >  SRR4302542.5312576/1‑94 (MQ=60)
                                                                       AGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAAC                        >  SRR4302542.7416411/1‑94 (MQ=60)
                                                                       AGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAAC                        <  SRR4302542.2731783/94‑1 (MQ=60)
                                                                       AGTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAAC                        >  SRR4302542.6832559/1‑94 (MQ=60)
                                                                        GTAGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACA                       >  SRR4302542.1777536/1‑94 (MQ=60)
                                                                          AGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATT                     <  SRR4302542.5888551/94‑1 (MQ=60)
                                                                          AGGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATT                     <  SRR4302542.838583/94‑1 (MQ=60)
                                                                           GGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTT                    <  SRR4302542.5095312/94‑1 (MQ=60)
                                                                           GGTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTT                    >  SRR4302542.922680/1‑94 (MQ=60)
                                                                            GTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTT                   >  SRR4302542.4497/1‑94 (MQ=60)
                                                                            GTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTT                   >  SRR4302542.5486590/1‑94 (MQ=60)
                                                                            GTATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTT                   >  SRR4302542.3443425/1‑94 (MQ=60)
                                                                              ATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCagcctattacttaaaaattttct                 >  SRR4302542.5314706/1‑71 (MQ=60)
                                                                              ATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCA                 <  SRR4302542.5439002/94‑1 (MQ=60)
                                                                              ATCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCA                 >  SRR4302542.6383282/1‑94 (MQ=60)
                                                                               TCCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCAT                <  SRR4302542.890659/94‑1 (MQ=60)
                                                                                CCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATT               <  SRR4302542.686535/94‑1 (MQ=60)
                                                                                CCTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATT               >  SRR4302542.1694544/1‑94 (MQ=60)
                                                                                 CTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTG              <  SRR4302542.2834583/94‑1 (MQ=60)
                                                                                 CTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTG              >  SRR4302542.3314187/1‑94 (MQ=60)
                                                                                 CTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTG              >  SRR4302542.949304/1‑94 (MQ=60)
                                                                                 CTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTG              >  SRR4302542.5199755/1‑94 (MQ=60)
                                                                                 CTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTG              >  SRR4302542.4476640/1‑94 (MQ=60)
                                                                                 CTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTG              >  SRR4302542.1411270/1‑94 (MQ=60)
                                                                                 CTCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTG              >  SRR4302542.2413591/1‑94 (MQ=60)
                                                                                  TCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGA             >  SRR4302542.2890492/1‑94 (MQ=60)
                                                                                  TCATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGA             <  SRR4302542.4211368/94‑1 (MQ=60)
                                                                                   CATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGAT            <  SRR4302542.5214923/94‑1 (MQ=60)
                                                                                   CATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGAT            >  SRR4302542.4166422/1‑94 (MQ=60)
                                                                                   CATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACACGAACATTTTCATTGAT            >  SRR4302542.3377455/1‑94 (MQ=60)
                                                                                    ATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATA           <  SRR4302542.7077452/94‑1 (MQ=60)
                                                                                    ATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATA           >  SRR4302542.6376717/1‑94 (MQ=60)
                                                                                    ATCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATA           >  SRR4302542.5432789/1‑94 (MQ=60)
                                                                                     TCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATAC          <  SRR4302542.1439011/94‑1 (MQ=60)
                                                                                     TCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATAC          <  SRR4302542.5878276/94‑1 (MQ=60)
                                                                                     TCGAGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATAC          <  SRR4302542.1983408/94‑1 (MQ=60)
                                                                                        AGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATACTCA       <  SRR4302542.5562406/94‑1 (MQ=60)
                                                                                        AGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATACTCA       <  SRR4302542.3739149/94‑1 (MQ=60)
                                                                                        AGTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATACTCA       >  SRR4302542.1801405/1‑94 (MQ=60)
                                                                                         GTGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATACTCAT      >  SRR4302542.1309075/1‑94 (MQ=60)
                                                                                          TGGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATACTCATT     >  SRR4302542.4187592/1‑94 (MQ=60)
                                                                                           GGCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATACTCATTA    >  SRR4302542.3152777/1‑94 (MQ=60)
                                                                                            GCTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATACTCATTAT   <  SRR4302542.4991009/94‑1 (MQ=60)
                                                                                             TTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATACTCATTATG  >  SRR4302542.874546/1‑94 (MQ=60)
                                                                                             CTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATACTCATTATG  >  SRR4302542.7170807/1‑94 (MQ=60)
                                                                                             |                                                                                             
TATCCCATGATGATTTGCCATTATTTTGTATTTGGGGTCATAGAAACATACAGGATAATCTTTTATCCCAGAGTAGGTATCCTCATCGAGTGGTTTCATACGCGTGAAGTTCTGCATATAGTTACCATTGCAATTCGTTTCATGATTTCCAGCTAATACATGAACATTTTCATTGATACTCATTATG  >  NC_000913/3629090‑3629276

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑