Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,654,259 T→C T38A (ACC→GCC)  hdeA ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,654,2590TC83.1% 652.7 / 130.0 301T38A (ACC→GCC) hdeAhypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (20/31);  new base C (121/129);  total (141/160)
Fisher's exact test for biased strand distribution p-value = 2.81e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01

Only 100 of 303 total aligned reads displayed.

TCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAATA  >  NC_000913/3654168‑3654350
                                                                                           |                                                                                           
  ttctGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCa                                                                                          <  1:7044352/93‑1 (MQ=255)
  ttctGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCa                                                                                          <  2:3911290/93‑1 (MQ=255)
   tctGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAg                                                                                         <  2:1898690/93‑1 (MQ=255)
   tctGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAg                                                                                         <  2:6832348/93‑1 (MQ=255)
     tGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAggc                                                                                       <  2:7405617/93‑2 (MQ=255)
     tGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGa                                                                                       <  1:3005995/93‑1 (MQ=255)
     tGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGa                                                                                       >  1:7163488/1‑93 (MQ=255)
      ggTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAg                                                                                      <  1:1856471/93‑1 (MQ=255)
      ggTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAg                                                                                      <  2:6589537/93‑1 (MQ=255)
       gTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGt                                                                                     <  2:7117362/93‑1 (MQ=255)
       gTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGt                                                                                     <  1:3340217/93‑1 (MQ=255)
         ttATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTg                                                                                   <  2:1447217/93‑1 (MQ=255)
          tATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGa                                                                                  <  2:6464208/93‑1 (MQ=255)
           aTCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGAc                                                                                 <  1:1038705/93‑1 (MQ=255)
           aTCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGAc                                                                                 <  1:1589214/93‑1 (MQ=255)
           aTCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGAc                                                                                 <  1:1441787/93‑1 (MQ=255)
            tCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGAcc                                                                                <  1:2972293/93‑1 (MQ=255)
             cTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCg                                                                               <  2:5008589/93‑1 (MQ=255)
               ttgttgTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGt                                                                             <  2:3626737/93‑1 (MQ=255)
               ttgttgTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGt                                                                             >  1:1258524/1‑93 (MQ=255)
                 gttgttCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGttt                                                                           <  1:3974358/93‑1 (MQ=255)
                  ttgttCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGtttt                                                                          >  1:3381449/1‑93 (MQ=255)
                   tgttCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGttttt                                                                         <  1:6610267/93‑1 (MQ=255)
                   tgttCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGttttt                                                                         <  1:940014/93‑1 (MQ=255)
                      tCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGt                                                                      >  1:2855435/1‑93 (MQ=255)
                       cAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGtt                                                                     <  1:3068498/93‑1 (MQ=255)
                           gcTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCa                                                                 <  2:4586042/93‑1 (MQ=255)
                           gcTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCa                                                                 <  2:5844270/93‑1 (MQ=255)
                            cTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAg                                                                >  2:3739537/1‑93 (MQ=255)
                            cTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAg                                                                >  1:5077975/1‑93 (MQ=255)
                             ttCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAgc                                                               <  2:2834020/93‑1 (MQ=255)
                             ttCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAgc                                                               >  1:1198788/1‑93 (MQ=255)
                             ttCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAgc                                                               <  1:1420978/93‑1 (MQ=255)
                              tCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAgct                                                              >  1:24098/1‑93 (MQ=255)
                              tCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAgct                                                              <  2:5613581/93‑1 (MQ=255)
                              tCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAgct                                                              <  1:1823294/93‑1 (MQ=255)
                                aGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAgctgc                                                            <  1:3469883/93‑1 (MQ=255)
                                aGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAgctgc                                                            <  1:6848855/93‑1 (MQ=255)
                                 gCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAgctgct                                                           >  2:5459284/1‑93 (MQ=255)
                                  cAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCtt                                                          >  2:4109822/1‑93 (MQ=255)
                                   aaaaCCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCttt                                                         <  1:5235445/93‑1 (MQ=255)
                                       ccAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTgc                                                     <  2:2294283/93‑1 (MQ=255)
                                        cAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTgcg                                                    >  1:2111959/1‑93 (MQ=255)
                                        cAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTgcg                                                    >  1:1648606/1‑93 (MQ=255)
                                          aCTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCa                                                  >  1:735483/1‑93 (MQ=255)
                                           cTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCNt                                                 >  2:7172436/1‑93 (MQ=255)
                                           cTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCAt                                                 >  1:4456171/1‑93 (MQ=255)
                                            tGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATc                                                <  2:2657574/93‑1 (MQ=255)
                                             gCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATcc                                               <  1:3866551/93‑1 (MQ=255)
                                               aGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGc                                             <  1:4571742/93‑1 (MQ=255)
                                                gTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCt                                            >  2:136114/1‑93 (MQ=255)
                                                gTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCt                                            >  1:538411/1‑93 (MQ=255)
                                                gTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCt                                            <  2:1998173/93‑1 (MQ=255)
                                                gTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCt                                            >  1:6302958/1‑93 (MQ=255)
                                                 ttGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTg                                           >  1:5803889/1‑93 (MQ=255)
                                                  tGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGc                                          <  2:2228498/93‑1 (MQ=255)
                                                  tGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGc                                          >  2:6186927/1‑93 (MQ=255)
                                                   ggCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCa                                         <  1:4290344/93‑1 (MQ=255)
                                                     cTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCAtt                                       <  2:7024145/93‑1 (MQ=255)
                                                     cTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCAtt                                       <  2:4766973/93‑1 (MQ=255)
                                                     cTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCAtt                                       <  2:5812451/93‑1 (MQ=255)
                                                       ggAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGc                                     >  1:2635388/1‑93 (MQ=255)
                                                        gAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCt                                    >  2:3824771/1‑93 (MQ=255)
                                                          aGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTca                                  <  2:1619183/93‑1 (MQ=255)
                                                           ggATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTcac                                 >  2:4490924/1‑93 (MQ=255)
                                                            gATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTcaca                                <  2:4961099/93‑1 (MQ=255)
                                                            gATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTcaca                                >  1:5995902/1‑93 (MQ=255)
                                                             aTTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACaa                               <  1:3566661/93‑1 (MQ=255)
                                                             aTTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACaa                               >  2:1167626/1‑93 (MQ=255)
                                                              ttCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAAc                              <  2:4159275/93‑1 (MQ=255)
                                                               tCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACt                             <  2:1767557/93‑1 (MQ=255)
                                                                  tCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGc                          >  2:506151/1‑93 (MQ=255)
                                                                   ccACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCa                         >  1:2581430/1‑93 (MQ=255)
                                                                    cacaGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCag                        >  1:2284991/1‑93 (MQ=255)
                                                                    cacaGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCag                        >  1:3146691/1‑93 (MQ=255)
                                                                       aGCCAGGAAATCTTCACAGGTCCAGGAGTTGACAGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCagaag                     <  1:461850/93‑1 (MQ=255)
                                                                        gCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCagaaga                    <  2:2559022/93‑1 (MQ=255)
                                                                        gCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCagaaga                    >  1:6180734/1‑93 (MQ=255)
                                                                        gCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCagaaga                    >  1:5676462/1‑93 (MQ=255)
                                                                        gCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCagaaga                    >  1:5266273/1‑93 (MQ=255)
                                                                        gCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCagaaga                    <  2:5350966/93‑1 (MQ=255)
                                                                        gCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCagaaga                    <  2:5579196/93‑1 (MQ=255)
                                                                          cAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGaagaag                  <  2:6676628/93‑1 (MQ=255)
                                                                          cAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGaagaag                  >  2:2461210/1‑93 (MQ=255)
                                                                           aGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGc                 <  2:3520385/93‑1 (MQ=255)
                                                                           aGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGc                 >  2:3241476/1‑93 (MQ=255)
                                                                             gAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAg               >  2:789046/1‑93 (MQ=255)
                                                                              aaaTCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGa              <  2:3115732/93‑1 (MQ=255)
                                                                              aaaTCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGa              <  1:2488988/93‑1 (MQ=255)
                                                                              aaaTCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGa              <  1:4509468/93‑1 (MQ=255)
                                                                               aaTCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGac             <  2:3995840/93‑1 (MQ=255)
                                                                                aTCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGacc            >  1:4826137/1‑93 (MQ=255)
                                                                                  cTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGaccac          <  2:4230012/93‑1 (MQ=255)
                                                                                      acaGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAg      >  1:4173665/1‑93 (MQ=255)
                                                                                       caGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGa     >  1:7378878/1‑93 (MQ=255)
                                                                                        aGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGaa    <  2:2393634/93‑1 (MQ=255)
                                                                                        aGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGaa    <  2:2059504/93‑1 (MQ=255)
                                                                                        aGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGaa    >  1:3699958/1‑93 (MQ=255)
                                                                                        aGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGaa    <  1:6475940/93‑1 (MQ=255)
                                                                                          gTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAATa  <  2:1399788/93‑1 (MQ=255)
                                                                                           |                                                                                           
TCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAATA  >  NC_000913/3654168‑3654350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAATAAC  >  NC_000913/3654166‑3654352
                                                                                             |                                                                                             
CATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGT                                                                                               <  SRR4302542.7242001/94‑1 (MQ=60)
 ATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCC                                                                                              >  SRR4302542.2805315/1‑94 (MQ=60)
 ATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCC                                                                                              >  SRR4302542.3766834/1‑94 (MQ=60)
   CTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCA                                                                                            >  SRR4302542.1623053/1‑94 (MQ=60)
    TTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGGAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAG                                                                                           >  SRR4302542.4532030/1‑94 (MQ=60)
    TTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAG                                                                                           <  SRR4302542.3811424/94‑1 (MQ=60)
    TTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAG                                                                                           <  SRR4302542.7113537/94‑1 (MQ=60)
      CTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGA                                                                                         >  SRR4302542.4942473/1‑94 (MQ=60)
      CTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGA                                                                                         >  SRR4302542.7233763/1‑94 (MQ=60)
       TGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAG                                                                                        >  SRR4302542.1519537/1‑94 (MQ=60)
       TGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAG                                                                                        >  SRR4302542.3481914/1‑94 (MQ=60)
       TGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAG                                                                                        <  SRR4302542.3034737/94‑1 (MQ=60)
        GGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGT                                                                                       <  SRR4302542.1872514/94‑1 (MQ=60)
        GGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGT                                                                                       >  SRR4302542.1267086/1‑94 (MQ=60)
         GTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTT                                                                                      <  SRR4302542.3371655/94‑1 (MQ=60)
          TTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTG                                                                                     >  SRR4302542.4573490/1‑94 (MQ=60)
          TTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTG                                                                                     <  SRR4302542.5854633/94‑1 (MQ=60)
            TATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGAC                                                                                   >  SRR4302542.6572410/1‑94 (MQ=60)
             ATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACC                                                                                  <  SRR4302542.1047628/94‑1 (MQ=60)
             ATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACC                                                                                  <  SRR4302542.1454237/94‑1 (MQ=60)
             ATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACC                                                                                  >  SRR4302542.5985756/1‑94 (MQ=60)
             ATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACC                                                                                  <  SRR4302542.3965006/94‑1 (MQ=60)
             ATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACC                                                                                  <  SRR4302542.1602934/94‑1 (MQ=60)
             ATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACC                                                                                  >  SRR4302542.4607566/1‑94 (MQ=60)
              TCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCG                                                                                 <  SRR4302542.3000760/94‑1 (MQ=60)
              TCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCG                                                                                 >  SRR4302542.1053528/1‑94 (MQ=60)
                TTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGT                                                                               >  SRR4302542.1269346/1‑94 (MQ=60)
                TTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGT                                                                               >  SRR4302542.1433714/1‑94 (MQ=60)
                TTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGG                                                                               >  SRR4302542.2444912/1‑94 (MQ=60)
                 TTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTT                                                                              <  SRR4302542.875949/94‑1 (MQ=60)
                 TTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTT                                                                              >  SRR4302542.5424937/1‑94 (MQ=60)
                  TGTTGTTCAGCGCTTCAGCAATACCAACTGCAGTTGGCTGGACGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTT                                                                             <  SRR4302542.7442910/94‑1 (MQ=60)
                  TGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTT                                                                             >  SRR4302542.7080512/1‑94 (MQ=60)
                   GTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTT                                                                            >  SRR4302542.3413212/1‑94 (MQ=60)
                   GTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTT                                                                            >  SRR4302542.7172885/1‑94 (MQ=60)
                   GTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTT                                                                            <  SRR4302542.257290/94‑1 (MQ=60)
                   GTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTT                                                                            <  SRR4302542.4013572/94‑1 (MQ=60)
                     TGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTT                                                                          <  SRR4302542.6675383/94‑1 (MQ=60)
                     TGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTT                                                                          <  SRR4302542.2498081/94‑1 (MQ=60)
                     TGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTT                                                                          <  SRR4302542.948104/94‑1 (MQ=60)
                       TTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGT                                                                        >  SRR4302542.2882877/1‑94 (MQ=60)
                       TTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGT                                                                        >  SRR4302542.3062614/1‑94 (MQ=60)
                        TCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTT                                                                       <  SRR4302542.3077147/94‑1 (MQ=60)
                         CAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTA                                                                      <  SRR4302542.3286059/94‑1 (MQ=60)
                         CAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTA                                                                      <  SRR4302542.3097749/94‑1 (MQ=60)
                         CAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTA                                                                      <  SRR4302542.1287812/94‑1 (MQ=60)
                          AGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTAT                                                                     >  SRR4302542.2964913/1‑94 (MQ=60)
                           GCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATC                                                                    <  SRR4302542.7351011/94‑1 (MQ=60)
                            CGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCA                                                                   <  SRR4302542.2656173/94‑1 (MQ=60)
                             GCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAG                                                                  >  SRR4302542.5127321/1‑94 (MQ=60)
                              CTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGC                                                                 >  SRR4302542.1209106/1‑94 (MQ=60)
                               TTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCT                                                                >  SRR4302542.24305/1‑94 (MQ=60)
                               TTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCT                                                                >  SRR4302542.3568648/1‑94 (MQ=60)
                               TTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCT                                                                <  SRR4302542.1630142/94‑1 (MQ=60)
                               TTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCT                                                                <  SRR4302542.1433282/94‑1 (MQ=60)
                                TCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTG                                                               <  SRR4302542.1839084/94‑1 (MQ=60)
                                  AGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCT                                                             <  SRR4302542.3502375/94‑1 (MQ=60)
                                  AGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCT                                                             <  SRR4302542.6916123/94‑1 (MQ=60)
                                    CAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTT                                                           <  SRR4302542.5365402/94‑1 (MQ=60)
                                    CAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTT                                                           >  SRR4302542.234470/1‑94 (MQ=60)
                                     AAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTT                                                          <  SRR4302542.5286345/94‑1 (MQ=60)
                                     AAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTT                                                          <  SRR4302542.5024142/94‑1 (MQ=60)
                                     AAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTT                                                          <  SRR4302542.949111/94‑1 (MQ=60)
                                     AAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTT                                                          <  SRR4302542.3003488/94‑1 (MQ=60)
                                      AAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTT                                                         >  SRR4302542.2991609/1‑94 (MQ=60)
                                       AACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTG                                                        >  SRR4302542.3658939/1‑94 (MQ=60)
                                       AACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTG                                                        <  SRR4302542.409463/94‑1 (MQ=60)
                                        ACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGC                                                       >  SRR4302542.2626654/1‑94 (MQ=60)
                                        ACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGC                                                       >  SRR4302542.1449040/1‑94 (MQ=60)
                                         CCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCG                                                      <  SRR4302542.3826929/94‑1 (MQ=60)
                                         CCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCG                                                      >  SRR4302542.2130189/1‑94 (MQ=60)
                                         CCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCG                                                      >  SRR4302542.1662855/1‑94 (MQ=60)
                                           AACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCA                                                    >  SRR4302542.741860/1‑94 (MQ=60)
                                           AACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCA                                                    >  SRR4302542.547444/1‑94 (MQ=60)
                                            ACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCAT                                                   >  SRR4302542.4499880/1‑94 (MQ=60)
                                            ACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCAT                                                   <  SRR4302542.1978398/94‑1 (MQ=60)
                                            ACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCAT                                                   <  SRR4302542.2563531/94‑1 (MQ=60)
                                             CTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATC                                                  >  SRR4302542.6379379/1‑94 (MQ=60)
                                             CTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATC                                                  >  SRR4302542.1777943/1‑94 (MQ=60)
                                              TGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCC                                                 <  SRR4302542.3386382/94‑1 (MQ=60)
                                              TGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCC                                                 <  SRR4302542.3386381/94‑1 (MQ=60)
                                              TGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCC                                                 >  SRR4302542.4225211/1‑94 (MQ=60)
                                               GCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCG                                                <  SRR4302542.3904766/94‑1 (MQ=60)
                                                 AGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCT                                              >  SRR4302542.6592096/1‑94 (MQ=60)
                                                 AGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCT                                              >  SRR4302542.6365058/1‑94 (MQ=60)
                                                 AGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCT                                              >  SRR4302542.5232169/1‑94 (MQ=60)
                                                 AGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCT                                              <  SRR4302542.4616482/94‑1 (MQ=60)
                                                 AGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCT                                              <  SRR4302542.5710217/94‑1 (MQ=60)
                                                 AGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCT                                              >  SRR4302542.543069/1‑94 (MQ=60)
                                                  GTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTG                                             >  SRR4302542.5860215/1‑94 (MQ=60)
                                                    TGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCA                                           <  SRR4302542.3019419/94‑1 (MQ=60)
                                                     GGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCAT                                          <  SRR4302542.4332534/94‑1 (MQ=60)
                                                     GGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCAT                                          <  SRR4302542.1149379/94‑1 (MQ=60)
                                                      GCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATT                                         <  SRR4302542.5865868/94‑1 (MQ=60)
                                                       CTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTTACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTG                                        >  SRR4302542.4500556/1‑94 (MQ=60)
                                                       CTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTG                                        <  SRR4302542.6232333/94‑1 (MQ=60)
                                                        TGGAGGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGC                                       >  SRR4302542.7041015/1‑94 (MQ=60)
                                                        TGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGC                                       >  SRR4302542.6884079/1‑94 (MQ=60)
                                                        TGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGC                                       >  SRR4302542.2660839/1‑94 (MQ=60)
                                                        TGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGC                                       >  SRR4302542.1965162/1‑94 (MQ=60)
                                                         GGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCT                                      <  SRR4302542.1859802/94‑1 (MQ=60)
                                                          GAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTC                                     >  SRR4302542.3167516/1‑94 (MQ=60)
                                                          GAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTC                                     >  SRR4302542.7123389/1‑94 (MQ=60)
                                                          GAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTC                                     <  SRR4302542.7596129/94‑1 (MQ=60)
                                                            AGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCAC                                   >  SRR4302542.1349798/1‑94 (MQ=60)
                                                             GGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACA                                  >  SRR4302542.6053977/1‑94 (MQ=60)
                                                               ATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAAC                                <  SRR4302542.3599959/94‑1 (MQ=60)
                                                               ATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAAC                                >  SRR4302542.5220279/1‑94 (MQ=60)
                                                                TTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACT                               <  SRR4302542.673519/94‑1 (MQ=60)
                                                                  CGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGG                             >  SRR4302542.5000019/1‑94 (MQ=60)
                                                                   GTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGC                            >  SRR4302542.4003795/1‑94 (MQ=60)
                                                                   GTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGC                            >  SRR4302542.5310295/1‑94 (MQ=60)
                                                                    TCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCA                           >  SRR4302542.2606451/1‑94 (MQ=60)
                                                                     CCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAG                          <  SRR4302542.1846532/94‑1 (MQ=60)
                                                                     CCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAG                          >  SRR4302542.3176577/1‑94 (MQ=60)
                                                                     CCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAG                          <  SRR4302542.3447096/94‑1 (MQ=60)
                                                                     CCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAG                          >  SRR4302542.2304627/1‑94 (MQ=60)
                                                                     CCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGCTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAG                          >  SRR4302542.283682/1‑94 (MQ=60)
                                                                      CACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGA                         >  SRR4302542.4497905/1‑94 (MQ=60)
                                                                       ACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAA                        >  SRR4302542.4325349/1‑94 (MQ=60)
                                                                         AGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGA                      <  SRR4302542.1774931/94‑1 (MQ=60)
                                                                         AGCCAGGAAATCTTCACAGGTCCAGGAGTTGACAGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGA                      <  SRR4302542.465849/94‑1 (MQ=60)
                                                                         AGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGA                      <  SRR4302542.2882114/94‑1 (MQ=60)
                                                                         AGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGA                      >  SRR4302542.5317452/1‑94 (MQ=60)
                                                                         AGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGA                      >  SRR4302542.2147942/1‑94 (MQ=60)
                                                                         AGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGA                      >  SRR4302542.6240689/1‑94 (MQ=60)
                                                                         AGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGA                      >  SRR4302542.5731583/1‑94 (MQ=60)
                                                                         AGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGA                      <  SRR4302542.4632297/94‑1 (MQ=60)
                                                                          GCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAA                     <  SRR4302542.6535455/94‑1 (MQ=60)
                                                                            CAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGC                   >  SRR4302542.2361886/1‑94 (MQ=60)
                                                                            CAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGC                   <  SRR4302542.4022969/94‑1 (MQ=60)
                                                                            CAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGC                   >  SRR4302542.4743619/1‑94 (MQ=60)
                                                                             AGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCA                  >  SRR4302542.4344830/1‑94 (MQ=60)
                                                                             AGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCA                  >  SRR4302542.7433018/1‑94 (MQ=60)
                                                                                AAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGAC               <  SRR4302542.4553666/94‑1 (MQ=60)
                                                                                AAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGAC               <  SRR4302542.2513138/94‑1 (MQ=60)
                                                                                AAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGAC               >  SRR4302542.5749351/1‑94 (MQ=60)
                                                                                AAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGAC               >  SRR4302542.5301666/1‑94 (MQ=60)
                                                                                 AATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACC              <  SRR4302542.1230399/94‑1 (MQ=60)
                                                                                 AATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACC              >  SRR4302542.3656757/1‑94 (MQ=60)
                                                                                 AATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACC              >  SRR4302542.4873169/1‑94 (MQ=60)
                                                                                  ATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCA             >  SRR4302542.4712207/1‑94 (MQ=60)
                                                                                  ATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCA             <  SRR4302542.3591847/94‑1 (MQ=60)
                                                                                    CTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACC           >  SRR4302542.4652016/1‑94 (MQ=60)
                                                                                    CTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACC           >  SRR4302542.6246360/1‑94 (MQ=60)
                                                                                     TTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCA          <  SRR4302542.159214/94‑1 (MQ=60)
                                                                                     TTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCA          <  SRR4302542.6146959/94‑1 (MQ=60)
                                                                                     TTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCA          <  SRR4302542.3352349/94‑1 (MQ=60)
                                                                                      TCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAA         <  SRR4302542.3109616/94‑1 (MQ=60)
                                                                                      TCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAA         <  SRR4302542.7419684/94‑1 (MQ=60)
                                                                                       CACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAG        <  SRR4302542.6297419/94‑1 (MQ=60)
                                                                                       CACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAG        >  SRR4302542.4214829/1‑94 (MQ=60)
                                                                                        ACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGA       >  SRR4302542.7451128/1‑94 (MQ=60)
                                                                                         CAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAA      >  SRR4302542.3736570/1‑94 (MQ=60)
                                                                                          AGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAAT     <  SRR4302542.6539746/94‑1 (MQ=60)
                                                                                           GGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAATA    <  SRR4302542.2281386/94‑1 (MQ=60)
                                                                                           GGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAATA    <  SRR4302542.2722734/94‑1 (MQ=60)
                                                                                           GGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAATA    >  SRR4302542.2261441/1‑94 (MQ=60)
                                                                                           GGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAATA    >  SRR4302542.119495/1‑94 (MQ=60)
                                                                                            GCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAATAA   <  SRR4302542.2773429/94‑1 (MQ=60)
                                                                                            GCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAATAA   <  SRR4302542.3799549/94‑1 (MQ=60)
                                                                                            GCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAATAA   <  SRR4302542.41648/94‑1 (MQ=60)
                                                                                            GCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAATAA   <  SRR4302542.3363446/94‑1 (MQ=60)
                                                                                            GCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAATAA   <  SRR4302542.4230909/94‑1 (MQ=60)
                                                                                             CCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAATAAC  <  SRR4302542.1453836/94‑1 (MQ=60)
                                                                                             CCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAATAAC  <  SRR4302542.1383248/94‑1 (MQ=60)
                                                                                             CCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAATAAC  >  SRR4302542.5188987/1‑94 (MQ=60)
                                                                                             CCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAATAAC  <  SRR4302542.5091519/94‑1 (MQ=60)
                                                                                             |                                                                                             
CATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAATAAC  >  NC_000913/3654166‑3654352

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑