Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,663,007 G→A T145I (ACA→ATA)  yhiX ← putative ARAC‑type regulatory protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,663,0070GA87.2% 965.0 / 82.2 327T145I (ACA→ATA) yhiXputative ARAC‑type regulatory protein
Reads supporting (aligned to +/- strand):  ref base G (16/26);  new base A (152/133);  total (168/159)
Fisher's exact test for biased strand distribution p-value = 7.07e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.06e-01

Only 100 of 327 total aligned reads displayed.

AACAGACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCT  >  NC_000913/3662917‑3663096
                                                                                           |                                                                                         
    gACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCa                                                                                     <  2:410318/93‑1 (MQ=255)
     aCTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCAt                                                                                    >  1:4915908/1‑93 (MQ=255)
       ttGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGt                                                                                  >  1:903208/1‑93 (MQ=255)
       ttGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGt                                                                                  >  1:662362/1‑93 (MQ=255)
       ggggACTAATCAACAGCTCGGGGGAGATTCGTGGTAAGGCCCACTCATGGGCAAGATTAGCAGGTATAAATGTACAAACTC‑GTGTTCGCATgg                                                                                  <  1:3327535/91‑2 (MQ=255)
        tGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGtt                                                                                 <  2:6462638/93‑1 (MQ=255)
        tGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGtt                                                                                 <  1:4224652/93‑1 (MQ=255)
          gACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTCGGTATTCGCATGttg                                                                                >  1:6230852/1‑92 (MQ=255)
          gACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCg                                                                               <  2:6051600/93‑1 (MQ=255)
             tcatcaACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGtt                                                                            >  1:527334/1‑93 (MQ=255)
             tcatcaACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGtt                                                                            >  2:6329872/1‑93 (MQ=255)
             tcatcaACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGtt                                                                            >  2:3067505/1‑93 (MQ=255)
             tcatcaACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGtt                                                                            >  2:5931142/1‑93 (MQ=255)
              catcaACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTg                                                                           <  1:6819118/93‑1 (MQ=255)
                tcaACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTa                                                                         >  1:6726467/1‑93 (MQ=255)
                tcaACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTa                                                                         >  1:6968523/1‑93 (MQ=255)
                 caACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTaa                                                                        >  2:5573972/1‑93 (MQ=255)
                 caACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTaa                                                                        >  2:741821/1‑93 (MQ=255)
                   aCAGCTCGCTGGTGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTaaaa                                                                      <  2:6728094/93‑1 (MQ=255)
                   aCAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTaaaa                                                                      >  2:3232676/1‑93 (MQ=255)
                     aGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACg                                                                    <  1:2966954/93‑1 (MQ=255)
                       cTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGtt                                                                  <  1:4706571/93‑1 (MQ=255)
                        tCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTc                                                                 <  2:3645648/93‑1 (MQ=255)
                        tCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTc                                                                 <  2:6266398/93‑1 (MQ=255)
                          gCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAg                                                               >  1:814046/1‑93 (MQ=255)
                           cTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGa                                                              <  1:640493/93‑1 (MQ=255)
                           cTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGa                                                              <  2:6655391/93‑1 (MQ=255)
                            tGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGaa                                                             <  1:1581604/93‑1 (MQ=255)
                            tGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGaa                                                             >  1:6307540/1‑93 (MQ=255)
                             ggCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAag                                                            >  2:5465509/1‑93 (MQ=255)
                              gCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAagc                                                           <  1:1074215/93‑1 (MQ=255)
                              gCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAagc                                                           <  1:567549/93‑1 (MQ=255)
                              gCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAagc                                                           <  2:1023380/93‑1 (MQ=255)
                               cGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAagca                                                          <  1:4494861/93‑1 (MQ=255)
                                gATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAagcag                                                         >  2:6788278/1‑93 (MQ=255)
                                 aTTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAagcagc                                                        >  1:3140791/1‑93 (MQ=255)
                                 aTTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAagcagc                                                        >  1:2703019/1‑93 (MQ=255)
                                 aTTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAagcagc                                                        >  1:676519/1‑93 (MQ=255)
                                  ttCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCg                                                       >  1:7051813/1‑93 (MQ=255)
                                       gCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGtata                                                  <  2:1113322/93‑1 (MQ=255)
                                       gCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGtata                                                  <  2:699154/93‑1 (MQ=255)
                                        cTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATaa                                                 <  1:2923161/93‑1 (MQ=255)
                                         tAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATaaa                                                >  2:806309/1‑93 (MQ=255)
                                         tAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATaaa                                                >  1:2894346/1‑93 (MQ=255)
                                         tAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATaaa                                                <  2:6617304/93‑1 (MQ=255)
                                         tAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATaaa                                                <  2:3026701/93‑1 (MQ=255)
                                         tAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATaaa                                                <  2:1866216/93‑1 (MQ=255)
                                         tAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGGTGTAAAACGTTCAGAAGCAGCGGTATaaa                                                >  1:2546000/1‑93 (MQ=255)
                                          aGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAg                                               <  2:2976584/93‑1 (MQ=255)
                                          aGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAg                                               <  1:6899712/93‑1 (MQ=255)
                                             gtCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGc                                            <  1:1873298/93‑1 (MQ=255)
                                              tCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCt                                           >  1:7363495/1‑93 (MQ=255)
                                                cACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCa                                         >  1:2682497/1‑93 (MQ=255)
                                                cACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCa                                         >  2:2918004/1‑93 (MQ=255)
                                                  cTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATc                                       >  1:5515963/1‑93 (MQ=255)
                                                       gggCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCaa                                  <  2:3712902/93‑1 (MQ=255)
                                                           gATATTATTATTGATAACCGTACAAACTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGaaa                              >  1:3929496/1‑93 (MQ=255)
                                                            atatTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGaaaa                             >  2:2002864/1‑93 (MQ=255)
                                                             tattattatTGATAACCGTACAAACTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGaaaaa                            <  2:5321539/93‑1 (MQ=255)
                                                             tattattatTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGaaaaa                            >  2:4125320/1‑93 (MQ=255)
                                                             tattattatTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGaaaaa                            <  1:4101926/93‑1 (MQ=255)
                                                              attattattGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAAc                           <  2:5143536/93‑1 (MQ=255)
                                                                tattattGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAg                         <  1:6076357/93‑1 (MQ=255)
                                                                 attattGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGa                        <  1:6510493/93‑1 (MQ=255)
                                                                 attattGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGa                        >  2:2274489/1‑93 (MQ=255)
                                                                  ttattGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGAt                       >  2:4667803/1‑93 (MQ=255)
                                                                    attGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATaa                     <  1:7458821/93‑1 (MQ=255)
                                                                       gATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATaacaa                  <  1:2020916/93‑1 (MQ=255)
                                                                        aTAACCGTACAAACTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATaacaac                 <  2:4840251/93‑1 (MQ=255)
                                                                        aTAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATaacaac                 <  2:2637089/93‑1 (MQ=255)
                                                                        aTAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATaacaac                 <  1:4411559/93‑1 (MQ=255)
                                                                        aTAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATaacaac                 <  2:5036012/93‑1 (MQ=255)
                                                                        aTAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATaacaac                 <  1:2229603/93‑1 (MQ=255)
                                                                        aTAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATaacaac                 >  2:3782401/1‑93 (MQ=255)
                                                                        aTAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATaacaac                 >  2:4580045/1‑93 (MQ=255)
                                                                          aaCCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGc               <  2:1477762/93‑1 (MQ=255)
                                                                           aCCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCa              >  1:3824727/1‑93 (MQ=255)
                                                                           aCCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCa              >  2:1014091/1‑93 (MQ=255)
                                                                           aCCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCa              >  1:5187586/1‑93 (MQ=255)
                                                                            ccGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCaa             >  2:4450746/1‑93 (MQ=255)
                                                                            ccGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCaa             >  2:3432034/1‑93 (MQ=255)
                                                                              gTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAg           >  2:7204345/1‑93 (MQ=255)
                                                                               tACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGa          >  1:1313399/1‑93 (MQ=255)
                                                                               tACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGa          <  1:2325402/93‑1 (MQ=255)
                                                                               tACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGa          >  2:4303465/1‑93 (MQ=255)
                                                                                 cAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGAtt        <  1:5061714/93‑1 (MQ=255)
                                                                                  aaaCTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTa       >  2:3917247/1‑93 (MQ=255)
                                                                                  aaaCTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTa       <  2:2844310/93‑1 (MQ=255)
                                                                                   aaCTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTaa      <  2:5694933/93‑1 (MQ=255)
                                                                                   aaCTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTaa      >  1:3437751/1‑93 (MQ=255)
                                                                                   aaCTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTaa      <  1:728633/93‑1 (MQ=255)
                                                                                   aaCTC‑GTATTCGCATGATCGGTTGAAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTaa      >  2:7359431/1‑93 (MQ=255)
                                                                                    aCTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAAt     <  1:5730534/93‑1 (MQ=255)
                                                                                    aCTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAAt     >  1:2442048/1‑93 (MQ=255)
                                                                                    aCTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAAt     >  2:2432681/1‑93 (MQ=255)
                                                                                    aCTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAAt     <  1:5333996/93‑1 (MQ=255)
                                                                                    aCTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAAt     <  1:1477507/93‑1 (MQ=255)
                                                                                     cTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATg    >  1:3706036/1‑93 (MQ=255)
                                                                                      tC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAGCGCAAAGATTAATGc   >  2:6419922/1‑93 (MQ=255)
                                                                                      tC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGc   <  1:5861385/93‑1 (MQ=255)
                                                                                           |                                                                                         
AACAGACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCT  >  NC_000913/3662917‑3663096

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TTTAACAGACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTT  >  NC_000913/3662914‑3663100
                                                                                              |                                                                                             
TTTAACAGACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTGGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTG                                                                                               <  SRR4302542.3533542/94‑1 (MQ=60)
TTTAACAGACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTG                                                                                               <  SRR4302542.3109149/94‑1 (MQ=60)
TTTAACAGACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTA                                                                                               >  SRR4302542.6091149/1‑94 (MQ=60)
TTTAACAGACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTA                                                                                               >  SRR4302542.909418/1‑94 (MQ=60)
TTTAACAGACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTA                                                                                               <  SRR4302542.2558522/94‑1 (MQ=60)
 TTAACAGACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTAT                                                                                              <  SRR4302542.6799898/94‑1 (MQ=60)
 TTAACAGACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTAT                                                                                              <  SRR4302542.7486395/94‑1 (MQ=60)
  TAACAGACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATT                                                                                             >  SRR4302542.5326618/1‑94 (MQ=60)
   AACAGACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTC                                                                                            <  SRR4302542.5176862/94‑1 (MQ=60)
   AACAGACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTC                                                                                            >  SRR4302542.2384414/1‑94 (MQ=60)
    ACAGACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCG                                                                                           >  SRR4302542.4603721/1‑94 (MQ=60)
    ACAGACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCG                                                                                           >  SRR4302542.1700936/1‑94 (MQ=60)
    ACAGACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCG                                                                                           >  SRR4302542.6785572/1‑94 (MQ=60)
     CAGACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGC                                                                                          >  SRR4302542.6344751/1‑94 (MQ=60)
      AGACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTGTTCGCA                                                                                         >  SRR4302542.5332088/1‑94 (MQ=60)
       GACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTGTTCGCAT                                                                                        <  SRR4302542.4067441/94‑1 (MQ=60)
       GACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCAT                                                                                        >  SRR4302542.4871763/1‑94 (MQ=60)
       GACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCAT                                                                                        <  SRR4302542.6926034/94‑1 (MQ=60)
       GACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCAT                                                                                        <  SRR4302542.7544887/94‑1 (MQ=60)
       GACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCAT                                                                                        >  SRR4302542.4963716/1‑94 (MQ=60)
         CTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGT                                                                                      >  SRR4302542.911017/1‑94 (MQ=60)
         CTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGT                                                                                      >  SRR4302542.668069/1‑94 (MQ=60)
         CTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGT                                                                                      <  SRR4302542.6675209/94‑1 (MQ=60)
         CTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGT                                                                                      >  SRR4302542.584091/1‑94 (MQ=60)
          TTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTT                                                                                     >  SRR4302542.6974127/1‑94 (MQ=60)
           TGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTGTTCGCATGTTC                                                                                    <  SRR4302542.1881379/94‑1 (MQ=60)
           TGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTC                                                                                    <  SRR4302542.4266275/94‑1 (MQ=60)
           TGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTC                                                                                    <  SRR4302542.4287902/94‑1 (MQ=60)
           TGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTC                                                                                    >  SRR4302542.3721825/1‑94 (MQ=60)
           TGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTC                                                                                    <  SRR4302542.2928173/94‑1 (MQ=60)
            GGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTCGGTATTCGCATGTTG                                                                                    >  SRR4302542.6292200/1‑94 (MQ=60)
            GGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTGTTCGCATGTTCG                                                                                   <  SRR4302542.3450729/94‑1 (MQ=60)
            GGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCG                                                                                   <  SRR4302542.1749463/94‑1 (MQ=60)
             GGCTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGG                                                                                  <  SRR4302542.2325491/94‑1 (MQ=60)
             GACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGG                                                                                  >  SRR4302542.3918435/1‑94 (MQ=60)
             GACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGG                                                                                  <  SRR4302542.6139501/94‑1 (MQ=60)
             GACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGG                                                                                  >  SRR4302542.6982040/1‑94 (MQ=60)
               CTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTT                                                                                >  SRR4302542.531888/1‑94 (MQ=60)
                 CATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGT                                                                              >  SRR4302542.7230292/1‑94 (MQ=60)
                 CATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGT                                                                              <  SRR4302542.6886149/94‑1 (MQ=60)
                 CATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGT                                                                              >  SRR4302542.1481591/1‑94 (MQ=60)
                  ATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTGTTCGCATGTTCGGTTGTA                                                                             <  SRR4302542.5128700/94‑1 (MQ=60)
                  ATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTA                                                                             >  SRR4302542.6350084/1‑94 (MQ=60)
                  ATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTA                                                                             >  SRR4302542.4931797/1‑94 (MQ=60)
                  ATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTA                                                                             >  SRR4302542.2600086/1‑94 (MQ=60)
                  ATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTA                                                                             >  SRR4302542.7036979/1‑94 (MQ=60)
                  ATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTA                                                                             >  SRR4302542.6792692/1‑94 (MQ=60)
                    CAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTGTTCGCATGTTCGGTTGTAAA                                                                           <  SRR4302542.4765483/94‑1 (MQ=60)
                     AACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAA                                                                          >  SRR4302542.1264182/1‑94 (MQ=60)
                     AACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAA                                                                          >  SRR4302542.6815627/1‑94 (MQ=60)
                      ACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTGTTCGCATGTTCGGTTGTAAAAC                                                                         <  SRR4302542.5777191/94‑1 (MQ=60)
                       CAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACG                                                                        >  SRR4302542.6445597/1‑94 (MQ=60)
                        AGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGT                                                                       <  SRR4302542.2995381/94‑1 (MQ=60)
                         GCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTT                                                                      <  SRR4302542.6593830/94‑1 (MQ=60)
                         GCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTT                                                                      <  SRR4302542.418977/94‑1 (MQ=60)
                          CTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTC                                                                     <  SRR4302542.4752483/94‑1 (MQ=60)
                           TCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCA                                                                    <  SRR4302542.1378970/94‑1 (MQ=60)
                            CGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAG                                                                   >  SRR4302542.821090/1‑94 (MQ=60)
                              CTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAA                                                                 <  SRR4302542.646005/94‑1 (MQ=60)
                              CTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAA                                                                 >  SRR4302542.6369677/1‑94 (MQ=60)
                              CTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAA                                                                 <  SRR4302542.5077795/94‑1 (MQ=60)
                              CTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAA                                                                 >  SRR4302542.1995294/1‑94 (MQ=60)
                               TGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAG                                                                <  SRR4302542.4618095/94‑1 (MQ=60)
                               TGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAG                                                                <  SRR4302542.1595257/94‑1 (MQ=60)
                                 GCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCA                                                              <  SRR4302542.572432/94‑1 (MQ=60)
                                 GCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCA                                                              <  SRR4302542.1083451/94‑1 (MQ=60)
                                 GCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCA                                                              <  SRR4302542.3433907/94‑1 (MQ=60)
                                  CGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAG                                                             <  SRR4302542.4538961/94‑1 (MQ=60)
                                  CGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAG                                                             >  SRR4302542.4193122/1‑94 (MQ=60)
                                   GATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGC                                                            <  SRR4302542.1566614/94‑1 (MQ=60)
                                   GATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGC                                                            >  SRR4302542.682357/1‑94 (MQ=60)
                                   GATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGC                                                            >  SRR4302542.2729094/1‑94 (MQ=60)
                                   GATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGC                                                            >  SRR4302542.3170642/1‑94 (MQ=60)
                                    ATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCG                                                           >  SRR4302542.7121043/1‑94 (MQ=60)
                                    ATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCG                                                           <  SRR4302542.2361009/94‑1 (MQ=60)
                                      TCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGT                                                         <  SRR4302542.2568349/94‑1 (MQ=60)
                                       CGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTA                                                        >  SRR4302542.5446427/1‑94 (MQ=60)
                                         GGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATA                                                      <  SRR4302542.6429080/94‑1 (MQ=60)
                                          GCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAA                                                     >  SRR4302542.304476/1‑94 (MQ=60)
                                           CTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAA                                                    >  SRR4302542.2922124/1‑94 (MQ=60)
                                           CTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAA                                                    <  SRR4302542.2951169/94‑1 (MQ=60)
                                           CTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGGTGTAAAACGTTCAGAAGCAGCGGTATAAA                                                    >  SRR4302542.2570676/1‑94 (MQ=60)
                                             AGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGT                                                  >  SRR4302542.2322519/1‑94 (MQ=60)
                                             AGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGT                                                  >  SRR4302542.6690194/1‑94 (MQ=60)
                                             AGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGT                                                  <  SRR4302542.6967462/94‑1 (MQ=60)
                                              GTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTG                                                 >  SRR4302542.5929103/1‑94 (MQ=60)
                                              GTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTG                                                 >  SRR4302542.3782351/1‑94 (MQ=60)
                                              GTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTG                                                 <  SRR4302542.2931386/94‑1 (MQ=60)
                                               TGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGC                                                >  SRR4302542.2723987/1‑94 (MQ=60)
                                                GTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCT                                               >  SRR4302542.5773047/1‑94 (MQ=60)
                                                GTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCT                                               >  SRR4302542.7433123/1‑94 (MQ=60)
                                                GTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCT                                               >  SRR4302542.7435620/1‑94 (MQ=60)
                                                GTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCT                                               <  SRR4302542.1889506/94‑1 (MQ=60)
                                                  CCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCA                                             >  SRR4302542.2708373/1‑94 (MQ=60)
                                                  CCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCA                                             >  SRR4302542.3516953/1‑94 (MQ=60)
                                                  CCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCA                                             >  SRR4302542.6863849/1‑94 (MQ=60)
                                                  CCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCA                                             >  SRR4302542.6432433/1‑94 (MQ=60)
                                                   CACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCAT                                            <  SRR4302542.6715550/94‑1 (MQ=60)
                                                   CACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCAT                                            <  SRR4302542.2709177/94‑1 (MQ=60)
                                                   CACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCAT                                            <  SRR4302542.3173450/94‑1 (MQ=60)
                                                    ACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATC                                           >  SRR4302542.5569565/1‑94 (MQ=60)
                                                     CTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCC                                          <  SRR4302542.80106/94‑1 (MQ=60)
                                                     CTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCC                                          >  SRR4302542.3312530/1‑94 (MQ=60)
                                                      TCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCT                                         <  SRR4302542.7457720/94‑1 (MQ=60)
                                                      TCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCT                                         <  SRR4302542.7383890/94‑1 (MQ=60)
                                                      TCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCT                                         >  SRR4302542.2969139/1‑94 (MQ=60)
                                                      TCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCT                                         <  SRR4302542.3924975/94‑1 (MQ=60)
                                                       CATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTC                                        <  SRR4302542.5282148/94‑1 (MQ=60)
                                                       CATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTC                                        >  SRR4302542.5725154/1‑94 (MQ=60)
                                                       CATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTC                                        <  SRR4302542.4515753/94‑1 (MQ=60)
                                                       CATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTC                                        >  SRR4302542.4523888/1‑94 (MQ=60)
                                                        ATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCA                                       >  SRR4302542.5713517/1‑94 (MQ=60)
                                                          GGGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAG                                     <  SRR4302542.3823943/94‑1 (MQ=60)
                                                           GGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGA                                    <  SRR4302542.6800911/94‑1 (MQ=60)
                                                           GGCGATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGA                                    >  SRR4302542.6982609/1‑94 (MQ=60)
                                                             CGATATTATTATTGATAACCGTACAAACTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAA                                  >  SRR4302542.3968272/1‑94 (MQ=60)
                                                             CGATATTATTATTGATAACCGTACAAACTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAA                                  <  SRR4302542.264996/94‑1 (MQ=60)
                                                              GATATTATTATTGATAACCGTACAAACTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAA                                 >  SRR4302542.4996652/1‑94 (MQ=60)
                                                              GATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAA                                 <  SRR4302542.2053708/94‑1 (MQ=60)
                                                              GATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAA                                 >  SRR4302542.4019276/1‑94 (MQ=60)
                                                              GATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAA                                 >  SRR4302542.3056322/1‑94 (MQ=60)
                                                               ATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAA                                >  SRR4302542.7073856/1‑94 (MQ=60)
                                                               ATATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAA                                >  SRR4302542.2498380/1‑94 (MQ=60)
                                                                TATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAAC                               <  SRR4302542.4142367/94‑1 (MQ=60)
                                                                TATTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAAC                               <  SRR4302542.239323/94‑1 (MQ=60)
                                                                  TTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAG                             >  SRR4302542.428452/1‑94 (MQ=60)
                                                                  TTATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAG                             <  SRR4302542.5333982/94‑1 (MQ=60)
                                                                   TATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGA                            <  SRR4302542.6135201/94‑1 (MQ=60)
                                                                   TATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGA                            <  SRR4302542.888675/94‑1 (MQ=60)
                                                                    ATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGAT                           >  SRR4302542.6845317/1‑94 (MQ=60)
                                                                    ATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGAT                           <  SRR4302542.6574662/94‑1 (MQ=60)
                                                                    ATTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGAT                           >  SRR4302542.6265017/1‑94 (MQ=60)
                                                                     TTATTGATAACCGTACAAACTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATA                          <  SRR4302542.1575998/94‑1 (MQ=60)
                                                                     TTATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATA                          <  SRR4302542.2799119/94‑1 (MQ=60)
                                                                      TATTGATAACCGTACAAACTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAA                         <  SRR4302542.5805755/94‑1 (MQ=60)
                                                                       ATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAAC                        <  SRR4302542.1209619/94‑1 (MQ=60)
                                                                       ATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAAC                        <  SRR4302542.6928474/94‑1 (MQ=60)
                                                                       ATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAAC                        <  SRR4302542.7531871/94‑1 (MQ=60)
                                                                       ATTGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAAC                        <  SRR4302542.7531870/94‑1 (MQ=60)
                                                                         TGATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAA                      <  SRR4302542.749742/94‑1 (MQ=60)
                                                                          GATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAAC                     <  SRR4302542.2038398/94‑1 (MQ=60)
                                                                           ATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACG                    <  SRR4302542.849745/94‑1 (MQ=60)
                                                                           ATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACG                    <  SRR4302542.2248789/94‑1 (MQ=60)
                                                                           ATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACG                    <  SRR4302542.5445254/94‑1 (MQ=60)
                                                                           ATAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACG                    <  SRR4302542.4454876/94‑1 (MQ=60)
                                                                            TAACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGC                   >  SRR4302542.1984886/1‑94 (MQ=60)
                                                                             AACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCA                  >  SRR4302542.5268229/1‑94 (MQ=60)
                                                                             AACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCA                  >  SRR4302542.5237981/1‑94 (MQ=60)
                                                                             AACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCA                  >  SRR4302542.3862567/1‑94 (MQ=60)
                                                                              ACCGTACAAACTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAA                 <  SRR4302542.990634/94‑1 (MQ=60)
                                                                              ACCGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAA                 <  SRR4302542.3030404/94‑1 (MQ=60)
                                                                                CGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAG               >  SRR4302542.6520827/1‑94 (MQ=60)
                                                                                CGTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAG               <  SRR4302542.2060932/94‑1 (MQ=60)
                                                                                 GTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGA              >  SRR4302542.1324714/1‑94 (MQ=60)
                                                                                 GTACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGA              <  SRR4302542.7265565/94‑1 (MQ=60)
                                                                                  TACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGAT             >  SRR4302542.4322546/1‑94 (MQ=60)
                                                                                  TACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGAT             >  SRR4302542.1778328/1‑94 (MQ=60)
                                                                                  TACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGAT             <  SRR4302542.2345338/94‑1 (MQ=60)
                                                                                   ACAAACTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATT            >  SRR4302542.95947/1‑94 (MQ=60)
                                                                                   ACAAACTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATT            >  SRR4302542.5939839/1‑94 (MQ=60)
                                                                                   ACAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATT            >  SRR4302542.275168/1‑94 (MQ=60)
                                                                                    CAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTA           <  SRR4302542.5110898/94‑1 (MQ=60)
                                                                                    CAAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTA           <  SRR4302542.2991167/94‑1 (MQ=60)
                                                                                     AAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAA          >  SRR4302542.3469933/1‑94 (MQ=60)
                                                                                     AAACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAA          <  SRR4302542.2919492/94‑1 (MQ=60)
                                                                                      AACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAAT         <  SRR4302542.734917/94‑1 (MQ=60)
                                                                                      AACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAAT         <  SRR4302542.6482296/94‑1 (MQ=60)
                                                                                      AACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAAT         >  SRR4302542.2465812/1‑94 (MQ=60)
                                                                                      AACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAAT         <  SRR4302542.7104720/94‑1 (MQ=60)
                                                                                       ACTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATG        <  SRR4302542.5786149/94‑1 (MQ=60)
                                                                                       ACTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATG        >  SRR4302542.3742706/1‑94 (MQ=60)
                                                                                       ACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATG        <  SRR4302542.5385824/94‑1 (MQ=60)
                                                                                       ACTC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATG        <  SRR4302542.1490253/94‑1 (MQ=60)
                                                                                         TC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCT      <  SRR4302542.3809911/94‑1 (MQ=60)
                                                                                         TC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCT      >  SRR4302542.5822236/1‑94 (MQ=60)
                                                                                         TC‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCT      <  SRR4302542.5918220/94‑1 (MQ=60)
                                                                                          C‑GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTC     >  SRR4302542.6824337/1‑94 (MQ=60)
                                                                                            GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCT    <  SRR4302542.3618163/94‑1 (MQ=60)
                                                                                            GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCT    >  SRR4302542.6856611/1‑94 (MQ=60)
                                                                                            GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCT    >  SRR4302542.369193/1‑94 (MQ=60)
                                                                                            GTATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCT    >  SRR4302542.1785602/1‑94 (MQ=60)
                                                                                             TATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTT   >  SRR4302542.2710161/1‑94 (MQ=60)
                                                                                              ATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTT  <  SRR4302542.2026329/94‑1 (MQ=60)
                                                                                              ATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTT  <  SRR4302542.1359189/94‑1 (MQ=60)
                                                                                              ATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTT  >  SRR4302542.6177162/1‑94 (MQ=60)
                                                                                              ATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTT  <  SRR4302542.566591/94‑1 (MQ=60)
                                                                                              ATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTT  >  SRR4302542.3661479/1‑94 (MQ=60)
                                                                                              ATTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCACCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTT  <  SRR4302542.4558713/94‑1 (MQ=60)
                                                                                              |                                                                                             
TTTAACAGACTTGGACTCATCAACAGCTCGCTGGCGATTCGGGCTAGTGTCCACTCATGGGCGATATTATTATTGATAACCGTACAAACTC‑GTGTTCGCATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTT  >  NC_000913/3662914‑3663100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑