Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,670,236 T→C Y89H (TAT→CAT)  yhjC → putative transcriptional regulator LYSR‑type

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,670,2360TC86.6% 692.6 / 95.8 284Y89H (TAT→CAT) yhjCputative transcriptional regulator LYSR‑type
Reads supporting (aligned to +/- strand):  ref base T (17/21);  new base C (107/138);  total (125/159)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.38e-01

Only 100 of 309 total aligned reads displayed.

GCGCCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTA  >  NC_000913/3670145‑3670325
                                                                                           |                                                                                         
gcgcCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCta                                                                                          <  1:5527350/93‑1 (MQ=255)
 cgcCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCcat                                                                                         <  1:1278639/93‑1 (MQ=255)
 cgcCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCcat                                                                                         <  1:6258407/93‑1 (MQ=255)
  gcCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCcatt                                                                                        <  1:4199412/93‑1 (MQ=255)
   ccAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCcatta                                                                                       <  1:4687719/93‑1 (MQ=255)
   ccAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCcatta                                                                                       >  1:6473277/1‑93 (MQ=255)
   ccAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCcatta                                                                                       <  1:2820098/93‑1 (MQ=255)
   ccAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCcatta                                                                                       >  2:4871023/1‑93 (MQ=255)
    cAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCcattat                                                                                      <  1:1809280/93‑1 (MQ=255)
    cAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCcattat                                                                                      <  1:199452/93‑1 (MQ=255)
     aGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATc                                                                                     <  2:652157/93‑1 (MQ=255)
       aTACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCaa                                                                                   <  2:4114891/93‑1 (MQ=255)
       aTACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCaa                                                                                   >  1:2640250/1‑93 (MQ=255)
       aTACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCaa                                                                                   >  1:2386376/1‑93 (MQ=255)
       aTACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCaa                                                                                   <  2:7374076/93‑1 (MQ=255)
        tACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAAc                                                                                  >  1:2149494/1‑93 (MQ=255)
          cAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGa                                                                                <  1:1156497/93‑1 (MQ=255)
          cAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGa                                                                                <  2:5362318/93‑1 (MQ=255)
               aCTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCaaa                                                                           >  1:3200936/1‑93 (MQ=255)
                 tGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAg                                                                         >  2:4678565/1‑93 (MQ=255)
                  ggAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGa                                                                        <  1:409129/93‑1 (MQ=255)
                  ggAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGa                                                                        <  1:6163961/93‑1 (MQ=255)
                    aaCATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGAtg                                                                      <  1:4857616/93‑1 (MQ=255)
                      cATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGAtgtg                                                                    >  2:6990798/1‑93 (MQ=255)
                       aTCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATgtgt                                                                   <  2:1919671/93‑1 (MQ=255)
                       aTCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATgtgt                                                                   >  2:2299510/1‑93 (MQ=255)
                       aTCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATgtgt                                                                   >  2:3847581/1‑93 (MQ=255)
                       aTCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCAATTATCAACGAGCAAAAGATgtgt                                                                   >  1:3485295/1‑93 (MQ=255)
                        tCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGtt                                                                  <  2:2573823/93‑1 (MQ=255)
                        tCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGtt                                                                  <  2:5016571/93‑1 (MQ=255)
                        tCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGtt                                                                  <  2:1672567/93‑1 (MQ=255)
                        tCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGtt                                                                  <  2:890613/93‑1 (MQ=255)
                         cAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTg                                                                 <  1:1726318/93‑1 (MQ=255)
                          aaCTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGa                                                                >  2:7178239/1‑93 (MQ=255)
                          aaCTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGa                                                                >  1:1374297/1‑93 (MQ=255)
                          aaCTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGa                                                                <  2:3483670/93‑1 (MQ=255)
                           aCTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAg                                                               <  2:5624553/93‑1 (MQ=255)
                           aCTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAg                                                               <  2:5721417/93‑1 (MQ=255)
                             ttGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTa                                                             >  1:7414674/1‑93 (MQ=255)
                                gCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAAtc                                                          <  2:1007469/93‑1 (MQ=255)
                                  aCCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAAtctc                                                        <  1:1844381/93‑1 (MQ=255)
                                  aCCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAAtctc                                                        <  2:7504533/93‑1 (MQ=255)
                                   cccAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCa                                                       >  1:2529342/1‑93 (MQ=255)
                                   cccAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCa                                                       >  1:6982315/1‑93 (MQ=255)
                                    ccAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAg                                                      >  1:5193462/1‑93 (MQ=255)
                                    ccAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAg                                                      >  1:3988956/1‑93 (MQ=255)
                                     cAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGc                                                     >  1:1572732/1‑93 (MQ=255)
                                     cAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGc                                                     <  2:6803143/93‑1 (MQ=255)
                                      aGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCg                                                    >  2:3373936/1‑93 (MQ=255)
                                      aGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCg                                                    >  2:1870922/1‑93 (MQ=255)
                                       gCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGa                                                   >  2:2741437/1‑93 (MQ=255)
                                       gCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGa                                                   >  2:2518950/1‑93 (MQ=255)
                                        cTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGaa                                                  >  2:4941169/1‑93 (MQ=255)
                                         ttCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAAc                                                 <  1:7233548/93‑1 (MQ=255)
                                         ttCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAAc                                                 <  2:1429816/93‑1 (MQ=255)
                                         ttCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAAc                                                 <  2:1551873/93‑1 (MQ=255)
                                         ttCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAAc                                                 <  2:2916532/93‑1 (MQ=255)
                                         ttCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAAc                                                 <  1:6285928/93‑1 (MQ=255)
                                          tctcCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACt                                                <  1:5276886/93‑1 (MQ=255)
                                           ctcCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTg                                               <  2:6573517/93‑1 (MQ=255)
                                            tcCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTgg                                              <  2:3709876/93‑1 (MQ=255)
                                             ccAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGa                                             <  2:2385560/93‑1 (MQ=255)
                                              cAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGAc                                            <  2:1351720/93‑1 (MQ=255)
                                               aGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACg                                           <  1:4614587/93‑1 (MQ=255)
                                                  gcACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTc                                        <  2:555113/93‑1 (MQ=255)
                                                  gcACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTc                                        <  2:4246747/93‑1 (MQ=255)
                                                    accacGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTg                                      <  1:373030/93‑1 (MQ=255)
                                                     ccacGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGt                                     >  1:6837309/1‑93 (MQ=255)
                                                      cacGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGtt                                    <  1:4989378/93‑1 (MQ=255)
                                                        cgcgACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTc                                  <  1:4366716/93‑1 (MQ=255)
                                                           gACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAAc                               >  2:5183777/1‑93 (MQ=255)
                                                            aCGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACa                              >  2:2954764/1‑93 (MQ=255)
                                                            aCGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACa                              <  1:5622846/93‑1 (MQ=255)
                                                               ggTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGa                           <  2:6106348/93‑1 (MQ=255)
                                                               ggTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGa                           <  2:633340/93‑1 (MQ=255)
                                                               ggTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGa                           <  2:4017269/93‑1 (MQ=255)
                                                                gTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGAt                          <  1:3137251/93‑1 (MQ=255)
                                                                 tCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATg                         >  2:661118/1‑93 (MQ=255)
                                                                  cAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGc                        >  1:1593655/1‑93 (MQ=255)
                                                                  cAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGc                        >  1:7011826/1‑93 (MQ=255)
                                                                   aaaCTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGcc                       >  1:5243569/1‑93 (MQ=255)
                                                                    aaCTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGcca                      >  1:2983612/1‑93 (MQ=255)
                                                                     aCTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGccac                     >  2:7140079/1‑93 (MQ=255)
                                                                      cTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGccacc                    >  2:2819527/1‑93 (MQ=255)
                                                                          cGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTa                <  1:5769867/93‑1 (MQ=255)
                                                                             cAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCa             >  1:4541577/1‑93 (MQ=255)
                                                                             cAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCa             <  2:5932958/93‑1 (MQ=255)
                                                                              aGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAg            >  1:5057849/1‑93 (MQ=255)
                                                                              aGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAg            >  1:5536922/1‑93 (MQ=255)
                                                                               gAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGc           >  1:1000636/1‑93 (MQ=255)
                                                                               gAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGc           <  1:6620254/93‑1 (MQ=255)
                                                                                  ggCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGt        <  2:2064253/93‑1 (MQ=255)
                                                                                  ggCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGt        <  2:5955953/93‑1 (MQ=255)
                                                                                  ggCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGt        >  2:4592025/1‑93 (MQ=255)
                                                                                    cATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTaa      <  1:6523101/93‑1 (MQ=255)
                                                                                     aTGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTaaa     >  1:6021437/1‑93 (MQ=255)
                                                                                     aTGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTaaa     <  2:3269434/93‑1 (MQ=255)
                                                                                      tGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAAt    >  1:2194212/1‑93 (MQ=255)
                                                                                       gACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAAtt   <  2:4438971/93‑1 (MQ=255)
                                                                                        aCCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTa  <  1:3117585/93‑1 (MQ=255)
                                                                                           |                                                                                         
GCGCCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTA  >  NC_000913/3670145‑3670325

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TCGCGCCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTACGCA  >  NC_000913/3670143‑3670329
                                                                                             |                                                                                             
TCGCGCCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCC                                                                                               <  SRR4302542.6016457/94‑1 (MQ=60)
 CGCGCCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTA                                                                                              >  SRR4302542.5314964/1‑94 (MQ=60)
 CGCGCCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCA                                                                                              >  SRR4302542.6120968/1‑94 (MQ=60)
  GCGCCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTAT                                                                                             <  SRR4302542.5581073/94‑1 (MQ=60)
   CGCCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATT                                                                                            <  SRR4302542.5721876/94‑1 (MQ=60)
   CGCCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATT                                                                                            <  SRR4302542.4129055/94‑1 (MQ=60)
   CGCCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATT                                                                                            <  SRR4302542.1289644/94‑1 (MQ=60)
   CGCCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATT                                                                                            <  SRR4302542.6320072/94‑1 (MQ=60)
    GCCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTA                                                                                           <  SRR4302542.4240817/94‑1 (MQ=60)
    GCCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTA                                                                                           >  SRR4302542.2184220/1‑94 (MQ=60)
    GCCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTA                                                                                           >  SRR4302542.6537053/1‑94 (MQ=60)
     CCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTAT                                                                                          <  SRR4302542.4733497/94‑1 (MQ=60)
     CCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTAT                                                                                          <  SRR4302542.2847219/94‑1 (MQ=60)
      CAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATC                                                                                         <  SRR4302542.4279/94‑1 (MQ=60)
      CAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATC                                                                                         <  SRR4302542.201143/94‑1 (MQ=60)
      CAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATC                                                                                         <  SRR4302542.1824957/94‑1 (MQ=60)
       AGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCA                                                                                        >  SRR4302542.1975369/1‑94 (MQ=60)
       AGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCA                                                                                        >  SRR4302542.44550/1‑94 (MQ=60)
        GATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAA                                                                                       >  SRR4302542.2408597/1‑94 (MQ=60)
        GATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAA                                                                                       >  SRR4302542.2665748/1‑94 (MQ=60)
         ATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAAC                                                                                      >  SRR4302542.7345121/1‑94 (MQ=60)
         ATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAAC                                                                                      >  SRR4302542.2168025/1‑94 (MQ=60)
          TACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACG                                                                                     <  SRR4302542.5586497/94‑1 (MQ=60)
          TACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACG                                                                                     <  SRR4302542.4679593/94‑1 (MQ=60)
          TACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACG                                                                                     <  SRR4302542.61515/94‑1 (MQ=60)
          TACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACG                                                                                     <  SRR4302542.6589958/94‑1 (MQ=60)
           ACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGA                                                                                    >  SRR4302542.5669647/1‑94 (MQ=60)
            CAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAG                                                                                   <  SRR4302542.5078606/94‑1 (MQ=60)
            CAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAG                                                                                   <  SRR4302542.7535250/94‑1 (MQ=60)
            CAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAG                                                                                   <  SRR4302542.1166407/94‑1 (MQ=60)
            CAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAG                                                                                   <  SRR4302542.5078605/94‑1 (MQ=60)
            CAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAG                                                                                   <  SRR4302542.5207688/94‑1 (MQ=60)
            CAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAG                                                                                   <  SRR4302542.5272273/94‑1 (MQ=60)
             AGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGC                                                                                  >  SRR4302542.407476/1‑94 (MQ=60)
                CACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAA                                                                               >  SRR4302542.3231237/1‑94 (MQ=60)
                CACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAA                                                                               <  SRR4302542.6730503/94‑1 (MQ=60)
                CACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAA                                                                               >  SRR4302542.7273367/1‑94 (MQ=60)
                 ACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAA                                                                              >  SRR4302542.893482/1‑94 (MQ=60)
                  CTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAG                                                                             >  SRR4302542.1200779/1‑94 (MQ=60)
                  CTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAG                                                                             <  SRR4302542.3188796/94‑1 (MQ=60)
                   TGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGA                                                                            <  SRR4302542.7051443/94‑1 (MQ=60)
                    GGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGAT                                                                           <  SRR4302542.1860045/94‑1 (MQ=60)
                    GGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGAT                                                                           <  SRR4302542.6223670/94‑1 (MQ=60)
                    GGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGAT                                                                           <  SRR4302542.412661/94‑1 (MQ=60)
                    GGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGAT                                                                           <  SRR4302542.1587048/94‑1 (MQ=60)
                     GAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGATGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATG                                                                          <  SRR4302542.7448050/94‑1 (MQ=60)
                     GAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATG                                                                          <  SRR4302542.2335149/94‑1 (MQ=60)
                     GAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATG                                                                          <  SRR4302542.235587/94‑1 (MQ=60)
                     GAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATG                                                                          <  SRR4302542.6584288/94‑1 (MQ=60)
                      AACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGT                                                                         >  SRR4302542.6883798/1‑94 (MQ=60)
                      AACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGT                                                                         <  SRR4302542.4904928/94‑1 (MQ=60)
                        CATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGT                                                                       >  SRR4302542.2718004/1‑94 (MQ=60)
                        CATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGT                                                                       <  SRR4302542.6631232/94‑1 (MQ=60)
                        CATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCAATTATCAACGAGCAAAAGATGTGT                                                                       >  SRR4302542.3517900/1‑94 (MQ=60)
                         ATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTT                                                                      <  SRR4302542.6257616/94‑1 (MQ=60)
                         ATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTT                                                                      >  SRR4302542.6264770/1‑94 (MQ=60)
                          TCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTG                                                                     <  SRR4302542.3408072/94‑1 (MQ=60)
                           CAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGA                                                                    >  SRR4302542.1386179/1‑94 (MQ=60)
                           CAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGA                                                                    <  SRR4302542.1741300/94‑1 (MQ=60)
                              CTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTA                                                                 >  SRR4302542.7487230/1‑94 (MQ=60)
                                TGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAAT                                                               <  SRR4302542.1772042/94‑1 (MQ=60)
                                TGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAAT                                                               <  SRR4302542.4797149/94‑1 (MQ=60)
                                 GGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATC                                                              <  SRR4302542.1835941/94‑1 (MQ=60)
                                  GCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCT                                                             <  SRR4302542.3975454/94‑1 (MQ=60)
                                   CACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTC                                                            <  SRR4302542.1606419/94‑1 (MQ=60)
                                   CACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTC                                                            >  SRR4302542.3133520/1‑94 (MQ=60)
                                   CACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTC                                                            <  SRR4302542.2518227/94‑1 (MQ=60)
                                   CACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGACAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTC                                                            >  SRR4302542.4855869/1‑94 (MQ=60)
                                    ACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCA                                                           <  SRR4302542.365326/94‑1 (MQ=60)
                                    ACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCA                                                           <  SRR4302542.1860339/94‑1 (MQ=60)
                                    ACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCA                                                           >  SRR4302542.7050890/1‑94 (MQ=60)
                                    ACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCA                                                           >  SRR4302542.2553872/1‑94 (MQ=60)
                                     CCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAG                                                          <  SRR4302542.2212686/94‑1 (MQ=60)
                                     CCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAG                                                          <  SRR4302542.569530/94‑1 (MQ=60)
                                     CCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAG                                                          >  SRR4302542.5243920/1‑94 (MQ=60)
                                     CCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAG                                                          >  SRR4302542.4028309/1‑94 (MQ=60)
                                      CCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGC                                                         >  SRR4302542.1115549/1‑94 (MQ=60)
                                      CCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGC                                                         >  SRR4302542.1586313/1‑94 (MQ=60)
                                       CAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCG                                                        >  SRR4302542.2537863/1‑94 (MQ=60)
                                       CAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCG                                                        >  SRR4302542.4624261/1‑94 (MQ=60)
                                          CTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAAC                                                     >  SRR4302542.4600539/1‑94 (MQ=60)
                                           TTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTATTCTCAGCGAACT                                                    >  SRR4302542.631571/1‑94 (MQ=60)
                                           TTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACT                                                    <  SRR4302542.7304501/94‑1 (MQ=60)
                                           TTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACT                                                    <  SRR4302542.6347870/94‑1 (MQ=60)
                                            TCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTG                                                   <  SRR4302542.5328163/94‑1 (MQ=60)
                                             CTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGG                                                  >  SRR4302542.5537901/1‑94 (MQ=60)
                                             CTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGG                                                  <  SRR4302542.1820911/94‑1 (MQ=60)
                                             CTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGG                                                  >  SRR4302542.1429875/1‑94 (MQ=60)
                                              TCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGA                                                 >  SRR4302542.7286532/1‑94 (MQ=60)
                                              TCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGA                                                 <  SRR4302542.5918249/94‑1 (MQ=60)
                                              TCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGA                                                 <  SRR4302542.5486660/94‑1 (MQ=60)
                                              TCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGA                                                 <  SRR4302542.5259786/94‑1 (MQ=60)
                                               CCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGAC                                                <  SRR4302542.6186190/94‑1 (MQ=60)
                                               CCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGAC                                                <  SRR4302542.42890/94‑1 (MQ=60)
                                                CAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACG                                               <  SRR4302542.1672496/94‑1 (MQ=60)
                                                 AGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGG                                              <  SRR4302542.4659672/94‑1 (MQ=60)
                                                 AGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGG                                              <  SRR4302542.3552777/94‑1 (MQ=60)
                                                   CGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTC                                            <  SRR4302542.6338929/94‑1 (MQ=60)
                                                    GCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCT                                           <  SRR4302542.469594/94‑1 (MQ=60)
                                                    GCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCT                                           <  SRR4302542.5584989/94‑1 (MQ=60)
                                                    GCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCT                                           <  SRR4302542.7026312/94‑1 (MQ=60)
                                                     CACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTG                                          <  SRR4302542.1799110/94‑1 (MQ=60)
                                                      ACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGT                                         >  SRR4302542.6904494/1‑94 (MQ=60)
                                                      ACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGT                                         <  SRR4302542.376279/94‑1 (MQ=60)
                                                       CCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTT                                        <  SRR4302542.5327320/94‑1 (MQ=60)
                                                        CACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTT                                       <  SRR4302542.4979429/94‑1 (MQ=60)
                                                        CACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTT                                       <  SRR4302542.5037797/94‑1 (MQ=60)
                                                         ACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTC                                      <  SRR4302542.4965192/94‑1 (MQ=60)
                                                          CGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCA                                     <  SRR4302542.2329833/94‑1 (MQ=60)
                                                          CGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCA                                     <  SRR4302542.4409584/94‑1 (MQ=60)
                                                          CGCGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAACAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCA                                     >  SRR4302542.2908849/1‑94 (MQ=60)
                                                            CGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAAC                                   >  SRR4302542.4046676/1‑94 (MQ=60)
                                                            CGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAAC                                   >  SRR4302542.6460584/1‑94 (MQ=60)
                                                            CGACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAAC                                   >  SRR4302542.3030672/1‑94 (MQ=60)
                                                             GACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACA                                  >  SRR4302542.2927912/1‑94 (MQ=60)
                                                              ACGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAG                                 <  SRR4302542.5677460/94‑1 (MQ=60)
                                                               CGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGG                                >  SRR4302542.5599663/1‑94 (MQ=60)
                                                               CGGGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGG                                <  SRR4302542.3472894/94‑1 (MQ=60)
                                                                 GGTCAAACTCACGCCAGAAGGCATGACCCATTATCAATGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGAT                              <  SRR4302542.2044771/94‑1 (MQ=60)
                                                                 GGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGAT                              >  SRR4302542.2035606/1‑94 (MQ=60)
                                                                 GGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGAT                              <  SRR4302542.2633818/94‑1 (MQ=60)
                                                                 GGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGAT                              >  SRR4302542.1470314/1‑94 (MQ=60)
                                                                 GGTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGAT                              <  SRR4302542.6635277/94‑1 (MQ=60)
                                                                  GTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATG                             >  SRR4302542.2637249/1‑94 (MQ=60)
                                                                  GTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATG                             <  SRR4302542.5995745/94‑1 (MQ=60)
                                                                  GTCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATG                             <  SRR4302542.3167072/94‑1 (MQ=60)
                                                                   TCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGC                            >  SRR4302542.1607424/1‑94 (MQ=60)
                                                                   TCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGC                            >  SRR4302542.7080698/1‑94 (MQ=60)
                                                                   TCAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGC                            >  SRR4302542.6372162/1‑94 (MQ=60)
                                                                    CAAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCC                           >  SRR4302542.5294540/1‑94 (MQ=60)
                                                                     AAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCA                          >  SRR4302542.7018077/1‑94 (MQ=60)
                                                                     AAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCA                          >  SRR4302542.5325162/1‑94 (MQ=60)
                                                                     AAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCA                          <  SRR4302542.3882123/94‑1 (MQ=60)
                                                                     AAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCA                          >  SRR4302542.3012180/1‑94 (MQ=60)
                                                                     AAACTCACGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGGGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCA                          >  SRR4302542.1646602/1‑94 (MQ=60)
                                                                            CGCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTAT                   <  SRR4302542.5825881/94‑1 (MQ=60)
                                                                             GCCAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATC                  <  SRR4302542.1916027/94‑1 (MQ=60)
                                                                              CCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCA                 >  SRR4302542.4586037/1‑94 (MQ=60)
                                                                               CAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAG                <  SRR4302542.3212671/94‑1 (MQ=60)
                                                                               CAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAG                >  SRR4302542.1128066/1‑94 (MQ=60)
                                                                               CAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAG                >  SRR4302542.7074950/1‑94 (MQ=60)
                                                                               CAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAG                >  SRR4302542.5106962/1‑94 (MQ=60)
                                                                               CAGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAG                >  SRR4302542.5590744/1‑94 (MQ=60)
                                                                                AGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGC               >  SRR4302542.4474630/1‑94 (MQ=60)
                                                                                AGAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGC               >  SRR4302542.1009246/1‑94 (MQ=60)
                                                                                 GAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCG              <  SRR4302542.4206101/94‑1 (MQ=60)
                                                                                 GAAGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCG              <  SRR4302542.6685529/94‑1 (MQ=60)
                                                                                   AGGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGT            >  SRR4302542.1260109/1‑94 (MQ=60)
                                                                                   AGGCATGACCCATTATCAACGAGAAAAAGATGTGTTAAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGT            <  SRR4302542.1325145/94‑1 (MQ=60)
                                                                                    GGCATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTA           >  SRR4302542.3161002/1‑94 (MQ=60)
                                                                                      CATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAA         >  SRR4302542.6079752/1‑94 (MQ=60)
                                                                                      CATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAA         >  SRR4302542.4138682/1‑94 (MQ=60)
                                                                                      CATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAA         <  SRR4302542.6587379/94‑1 (MQ=60)
                                                                                       ATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAAT        >  SRR4302542.2213111/1‑94 (MQ=60)
                                                                                       ATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAAT        >  SRR4302542.1340103/1‑94 (MQ=60)
                                                                                       ATGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAAT        >  SRR4302542.512917/1‑94 (MQ=60)
                                                                                        TGACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATT       <  SRR4302542.6545434/94‑1 (MQ=60)
                                                                                         GACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTA      >  SRR4302542.2760070/1‑94 (MQ=60)
                                                                                          ACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTAC     <  SRR4302542.3147443/94‑1 (MQ=60)
                                                                                          ACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTAC     <  SRR4302542.3147214/94‑1 (MQ=60)
                                                                                          ACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTAC     >  SRR4302542.5241512/1‑94 (MQ=60)
                                                                                          ACCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTAC     >  SRR4302542.1932711/1‑94 (MQ=60)
                                                                                           CCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTACG    >  SRR4302542.5027498/1‑94 (MQ=60)
                                                                                           CCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTACG    <  SRR4302542.3228770/94‑1 (MQ=60)
                                                                                           CCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTACG    <  SRR4302542.4137923/94‑1 (MQ=60)
                                                                                           CCCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTACG    <  SRR4302542.561361/94‑1 (MQ=60)
                                                                                            CCATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTACGC   >  SRR4302542.4307017/1‑94 (MQ=60)
                                                                                             TATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTACGCA  >  SRR4302542.5258280/1‑94 (MQ=60)
                                                                                             CATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTACGCA  >  SRR4302542.6328527/1‑94 (MQ=60)
                                                                                             CATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTACGCA  <  SRR4302542.4864165/94‑1 (MQ=60)
                                                                                             CATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTACGCA  >  SRR4302542.7302876/1‑94 (MQ=60)
                                                                                             |                                                                                             
TCGCGCCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTACGCA  >  NC_000913/3670143‑3670329

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑