Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,677,270 |
T→C |
T147T (ACT→ACC) |
kdgK → |
ketodeoxygluconokinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,677,270 | 0 | T | C | 87.1%
| 703.3
/ 88.7
| 287 | T147T (ACT→ACC) | kdgK | ketodeoxygluconokinase |
| Reads supporting (aligned to +/- strand): ref base T (21/16); new base C (118/132); total (139/148) |
| Fisher's exact test for biased strand distribution p-value = 2.95e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.05e-01 |
Only 100 of 288 total aligned reads displayed.
CGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCG > NC_000913/3677179‑3677359
|
ggCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTc < 1:606463/93‑1 (MQ=255)
ggCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTc > 1:4214583/1‑93 (MQ=255)
ggCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTc > 2:6202290/1‑93 (MQ=255)
gCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTcc > 1:2676106/1‑93 (MQ=255)
cATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTccc < 1:1733945/93‑1 (MQ=255)
aTTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCt < 1:2471913/93‑1 (MQ=255)
aTTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCt > 1:7105320/1‑93 (MQ=255)
ttAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTg > 1:1700151/1‑93 (MQ=255)
aCCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGAcc > 1:1003385/1‑93 (MQ=255)
aCCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGAcc > 1:5265751/1‑93 (MQ=255)
aCCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGAcc < 2:4250061/93‑1 (MQ=255)
aCCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGAcc < 2:1501513/93‑1 (MQ=255)
ccGTTCATTACGAAACGGCGCTGGGAACGGACAGTTTTAGCCACCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGAccc > 1:1242506/1‑93 (MQ=255)
cGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCa > 1:2777580/1‑93 (MQ=255)
cGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCa > 2:5278110/1‑93 (MQ=255)
gTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCaa > 1:5331206/1‑93 (MQ=255)
gTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCaa < 2:1736729/93‑1 (MQ=255)
tCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACg < 1:532507/93‑1 (MQ=255)
aTTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGa < 2:2769049/93‑1 (MQ=255)
aTTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGa < 2:3902413/93‑1 (MQ=255)
aTTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGa > 1:2580344/1‑93 (MQ=255)
ttACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGAt > 1:3377229/1‑93 (MQ=255)
ttACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGAt > 1:1964450/1‑93 (MQ=255)
ttACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGAt < 2:3410100/93‑1 (MQ=255)
tACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATg < 1:6813496/93‑1 (MQ=255)
tACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATg < 2:5990435/93‑1 (MQ=255)
tAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGaaa > 1:6298145/1‑93 (MQ=255)
aaCGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGaaaa < 2:3147282/93‑1 (MQ=255)
gcgcTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGt < 1:3179046/93‑1 (MQ=255)
cgcTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTc < 2:5655615/93‑1 (MQ=255)
cgcTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTc < 1:3493956/93‑1 (MQ=255)
gcTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCt < 1:2362456/93‑1 (MQ=255)
cTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTg < 2:6710542/93‑1 (MQ=255)
tGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGc < 1:858605/93‑1 (MQ=255)
gggAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATCCCTCCCTGACCCAACGGATGGAAAACCGTCTGcc < 1:7453164/93‑1 (MQ=255)
gggAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGcc < 1:4438321/93‑1 (MQ=255)
gggAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGcc < 2:7191749/93‑1 (MQ=255)
ggAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCg < 1:6859972/93‑1 (MQ=255)
ggAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCg > 1:1351892/1‑93 (MQ=255)
gAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCgg > 1:942568/1‑93 (MQ=255)
aaCGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCggg > 2:1157566/1‑93 (MQ=255)
cGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGcc < 2:4415329/93‑1 (MQ=255)
cAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTta < 2:5708099/93‑1 (MQ=255)
ttttAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTtacta > 2:2623395/1‑93 (MQ=255)
ttttAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGACTGCCGGGCCTTtacta > 2:5248857/1‑93 (MQ=255)
tttAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTtactac > 2:4569361/1‑93 (MQ=255)
tAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACAt < 1:3682745/93‑1 (MQ=255)
tAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACAt > 1:5133155/1‑93 (MQ=255)
ccAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGCCCCAACGGATGGAAAACCGTCTCCCGGGCCTTTCTTACAttta > 1:6561937/1‑91 (MQ=255)
ccAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGa < 2:469106/93‑1 (MQ=255)
cagcagATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGaa < 2:4435149/93‑1 (MQ=255)
cagcagATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGaa > 1:5534331/1‑93 (MQ=255)
agcagATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGaaa < 1:6980209/93‑1 (MQ=255)
agcagATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGaaa < 1:385278/93‑1 (MQ=255)
gcagATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAAc < 1:2886808/93‑1 (MQ=255)
gcagATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAAc < 1:6156762/93‑1 (MQ=255)
cagATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAAcc > 1:5405944/1‑93 (MQ=255)
agATGCTGGACGCCTGGCACGGCGAGCACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCg > 1:4032853/1‑93 (MQ=255)
gATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGa < 2:2295158/93‑1 (MQ=255)
gATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGa > 2:6271038/1‑93 (MQ=255)
aTGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGAc < 2:3308211/93‑1 (MQ=255)
tGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACa < 2:7278022/93‑1 (MQ=255)
tGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCa > 2:5562055/1‑93 (MQ=255)
tGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCa > 2:5483418/1‑93 (MQ=255)
tGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCa < 2:6573975/93‑1 (MQ=255)
ggACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCAc > 1:4727083/1‑93 (MQ=255)
ggACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCAc < 2:645283/93‑1 (MQ=255)
ggACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCAc < 1:5783783/93‑1 (MQ=255)
gACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCAcc < 1:232048/93‑1 (MQ=255)
gACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCAcc < 2:3800892/93‑1 (MQ=255)
gACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCAcc > 1:1515903/1‑93 (MQ=255)
aCGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCg > 2:2013178/1‑93 (MQ=255)
aCGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCg > 2:3033825/1‑93 (MQ=255)
aCGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCg < 1:2093296/93‑1 (MQ=255)
cGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCgg < 1:6629478/93‑1 (MQ=255)
cGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCgg < 2:736438/93‑1 (MQ=255)
gCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGc > 1:1079709/1‑93 (MQ=255)
cTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGa > 2:2361148/1‑93 (MQ=255)
cTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGa < 1:7068948/93‑1 (MQ=255)
tGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAg < 1:3928478/93‑1 (MQ=255)
tGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAg > 1:5676499/1‑93 (MQ=255)
ggCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGc > 2:4346009/1‑93 (MQ=255)
ggCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGc < 2:6871784/93‑1 (MQ=255)
cGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTAc > 1:22652/1‑93 (MQ=255)
cGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTAc < 2:2088004/93‑1 (MQ=255)
ggCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACg < 1:4310657/93‑1 (MQ=255)
gCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGt > 2:4835583/1‑93 (MQ=255)
cGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGtt < 2:1358858/93‑1 (MQ=255)
agaACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTct > 1:5961827/1‑93 (MQ=255)
gaACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTcta < 2:3437753/93‑1 (MQ=255)
gaACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTcta > 1:1563772/1‑93 (MQ=255)
aaCGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTctac < 1:4807541/93‑1 (MQ=255)
aCGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTctact > 2:3614559/1‑93 (MQ=255)
gTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCtactac < 2:4933261/93‑1 (MQ=255)
gTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCtactac < 2:5941940/93‑1 (MQ=255)
gTTGATACCGCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCtactac < 1:7251739/93‑1 (MQ=255)
ttGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTactact < 2:3020503/93‑1 (MQ=255)
tGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTg < 1:4175520/93‑1 (MQ=255)
tGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTg < 2:2840351/93‑1 (MQ=255)
tACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCg < 2:2937976/93‑1 (MQ=255)
|
CGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCG > NC_000913/3677179‑3677359
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAAC > NC_000913/3677178‑3677363
|
GCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCT < SRR4302542.6052960/94‑1 (MQ=60)
GCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCT > SRR4302542.4462433/1‑94 (MQ=60)
CGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTC < SRR4302542.477992/94‑1 (MQ=60)
CGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTC > SRR4302542.4256119/1‑94 (MQ=60)
GGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCC < SRR4302542.611686/94‑1 (MQ=60)
GGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCC > SRR4302542.2183771/1‑94 (MQ=60)
GGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCC > SRR4302542.2701935/1‑94 (MQ=60)
GCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCC > SRR4302542.5345335/1‑94 (MQ=60)
CATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCT < SRR4302542.1748990/94‑1 (MQ=60)
CATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCT > SRR4302542.7175064/1‑94 (MQ=60)
CATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCT < SRR4302542.2651167/94‑1 (MQ=60)
ATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTG > SRR4302542.7552301/1‑94 (MQ=60)
ATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTG < SRR4302542.5476679/94‑1 (MQ=60)
ATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTG < SRR4302542.2495901/94‑1 (MQ=60)
ATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTG > SRR4302542.1714885/1‑94 (MQ=60)
AACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACC > SRR4302542.1012029/1‑94 (MQ=60)
AACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACC > SRR4302542.6722209/1‑94 (MQ=60)
AACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACC > SRR4302542.5316922/1‑94 (MQ=60)
AACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACC > SRR4302542.6137386/1‑94 (MQ=60)
ACCGTTCATTACGAAACGGCGCTGGGAACGGACAGTTTTAGCCACCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCC > SRR4302542.1253182/1‑94 (MQ=60)
CCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCA > SRR4302542.205648/1‑94 (MQ=60)
CCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCA > SRR4302542.2804325/1‑94 (MQ=60)
CCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCA > SRR4302542.1738617/1‑94 (MQ=60)
CCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCA > SRR4302542.1006612/1‑94 (MQ=60)
CGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAA > SRR4302542.5383006/1‑94 (MQ=60)
CGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAA > SRR4302542.2871502/1‑94 (MQ=60)
GTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAAC > SRR4302542.5449100/1‑94 (MQ=60)
GTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAAC < SRR4302542.2591435/94‑1 (MQ=60)
TTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACG < SRR4302542.5354480/94‑1 (MQ=60)
TCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGG < SRR4302542.537105/94‑1 (MQ=60)
CATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGA > SRR4302542.2605356/1‑94 (MQ=60)
ATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGAT > SRR4302542.1405839/1‑94 (MQ=60)
ATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGAT < SRR4302542.3841874/94‑1 (MQ=60)
ATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGAT > SRR4302542.1058700/1‑94 (MQ=60)
ATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGAT > SRR4302542.3408964/1‑94 (MQ=60)
ATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGAT > SRR4302542.1981426/1‑94 (MQ=60)
TTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATG < SRR4302542.5313412/94‑1 (MQ=60)
TACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGG < SRR4302542.6880475/94‑1 (MQ=60)
TACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGG < SRR4302542.3628713/94‑1 (MQ=60)
ACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGA < SRR4302542.3506936/94‑1 (MQ=60)
ACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGA > SRR4302542.5384308/1‑94 (MQ=60)
ACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTAGATACCTCCCTGACCCAACGGATGGA > SRR4302542.1597313/1‑94 (MQ=60)
GTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATCGAAA < SRR4302542.7044432/94‑1 (MQ=60)
GTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAA > SRR4302542.431448/1‑94 (MQ=60)
GTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAA > SRR4302542.6360194/1‑94 (MQ=60)
AACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAAC > SRR4302542.6658523/1‑94 (MQ=60)
AACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAAC < SRR4302542.7528893/94‑1 (MQ=60)
AACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAAC < SRR4302542.895243/94‑1 (MQ=60)
AACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAAC < SRR4302542.453462/94‑1 (MQ=60)
ACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACC < SRR4302542.4353365/94‑1 (MQ=60)
CGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCG > SRR4302542.5698694/1‑94 (MQ=60)
GCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTC > SRR4302542.552079/1‑94 (MQ=60)
GCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTC > SRR4302542.5848433/1‑94 (MQ=60)
GCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTC < SRR4302542.3209174/94‑1 (MQ=60)
CGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCT < SRR4302542.5798873/94‑1 (MQ=60)
CGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCT < SRR4302542.3313920/94‑1 (MQ=60)
CGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCT < SRR4302542.3526633/94‑1 (MQ=60)
CGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGAAAAACCGTCT < SRR4302542.6885465/94‑1 (MQ=60)
GCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTG < SRR4302542.5380243/94‑1 (MQ=60)
GCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTG < SRR4302542.2564994/94‑1 (MQ=60)
GCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTG < SRR4302542.3896725/94‑1 (MQ=60)
GCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTG < SRR4302542.2382811/94‑1 (MQ=60)
CTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGC > SRR4302542.5233871/1‑94 (MQ=60)
TGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCC < SRR4302542.866003/94‑1 (MQ=60)
TGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCC < SRR4302542.3406689/94‑1 (MQ=60)
GGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATCCCTCCCTGACCCAACGGATGGAAAACCGTCTGCCG < SRR4302542.7526145/94‑1 (MQ=60)
GGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCG > SRR4302542.4349840/1‑94 (MQ=60)
GGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCG > SRR4302542.1363564/1‑94 (MQ=60)
GGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCG < SRR4302542.4481882/94‑1 (MQ=60)
GGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGG > SRR4302542.950677/1‑94 (MQ=60)
GGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGG < SRR4302542.6927378/94‑1 (MQ=60)
GAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGG < SRR4302542.6903331/94‑1 (MQ=60)
GAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGG < SRR4302542.5043280/94‑1 (MQ=60)
ACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCC < SRR4302542.1243669/94‑1 (MQ=60)
CGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCT > SRR4302542.3073995/1‑94 (MQ=60)
GACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTT > SRR4302542.4234857/1‑94 (MQ=60)
ACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTA > SRR4302542.7081634/1‑94 (MQ=60)
CAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTAC < SRR4302542.7006437/94‑1 (MQ=60)
AGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACT > SRR4302542.4122393/1‑94 (MQ=60)
AGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACT > SRR4302542.7196944/1‑94 (MQ=60)
AGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACT < SRR4302542.7140798/94‑1 (MQ=60)
AGTTTTAGCCAGCAGATGCTGGACGCCGGGCACGGCGAGAACGTTGATACCCCCCTGCCCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACT < SRR4302542.400366/94‑1 (MQ=60)
TTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTAC > SRR4302542.7170856/1‑94 (MQ=60)
TTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACA < SRR4302542.2772348/94‑1 (MQ=60)
TTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACAT > SRR4302542.5183053/1‑94 (MQ=60)
TAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATT < SRR4302542.3718875/94‑1 (MQ=60)
TAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATT < SRR4302542.4534898/94‑1 (MQ=60)
AGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTG > SRR4302542.4111408/1‑94 (MQ=60)
AGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTG < SRR4302542.2482517/94‑1 (MQ=60)
GCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGCCCCAACGGATGGAAAACCGTCTCCCGGGCCTTTcttacattta > SRR4302542.6626610/1‑84 (MQ=60)
CCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAA > SRR4302542.2367427/1‑94 (MQ=60)
CCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAA > SRR4302542.5588128/1‑94 (MQ=60)
CCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAA < SRR4302542.3619356/94‑1 (MQ=60)
CAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAA < SRR4302542.6074531/94‑1 (MQ=60)
AGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAAC < SRR4302542.7048769/94‑1 (MQ=60)
AGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAAC < SRR4302542.388620/94‑1 (MQ=60)
AGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAAC < SRR4302542.5793443/94‑1 (MQ=60)
AGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAAC > SRR4302542.37211/1‑94 (MQ=60)
GCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACC < SRR4302542.2914528/94‑1 (MQ=60)
GCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACC > SRR4302542.6629086/1‑94 (MQ=60)
GCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACC > SRR4302542.5458457/1‑94 (MQ=60)
GCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACC < SRR4302542.6216379/94‑1 (MQ=60)
CAGATGCTGGACGCCTGGCACGGCGAGCACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCG > SRR4302542.4072646/1‑94 (MQ=60)
CAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCG > SRR4302542.1549027/1‑94 (MQ=60)
CAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCG < SRR4302542.4795918/94‑1 (MQ=60)
AGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGA > SRR4302542.3988431/1‑94 (MQ=60)
AGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGA < SRR4302542.1753614/94‑1 (MQ=60)
GATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGAC > SRR4302542.3958868/1‑94 (MQ=60)
ATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACA < SRR4302542.6606765/94‑1 (MQ=60)
TGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAG < SRR4302542.5708796/94‑1 (MQ=60)
TGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAG < SRR4302542.4359614/94‑1 (MQ=60)
TGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAG > SRR4302542.5934882/1‑94 (MQ=60)
GCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGC < SRR4302542.7193274/94‑1 (MQ=60)
GCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGC < SRR4302542.1739896/94‑1 (MQ=60)
CTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCA > SRR4302542.2742643/1‑94 (MQ=60)
TGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCAC > SRR4302542.1283439/1‑94 (MQ=60)
TGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCAC > SRR4302542.4773150/1‑94 (MQ=60)
GGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACC > SRR4302542.1529000/1‑94 (MQ=60)
GGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACC < SRR4302542.5839943/94‑1 (MQ=60)
GACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCG < SRR4302542.234042/94‑1 (MQ=60)
ACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGG < SRR4302542.6157625/94‑1 (MQ=60)
ACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGG < SRR4302542.2111355/94‑1 (MQ=60)
CGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGC < SRR4302542.6694835/94‑1 (MQ=60)
CGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGC > SRR4302542.1088977/1‑94 (MQ=60)
GCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCG > SRR4302542.1312645/1‑94 (MQ=60)
CTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAG < SRR4302542.7138330/94‑1 (MQ=60)
CTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAG > SRR4302542.5731620/1‑94 (MQ=60)
CTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAG < SRR4302542.2315645/94‑1 (MQ=60)
TGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGC < SRR4302542.1538203/94‑1 (MQ=60)
TGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGC < SRR4302542.3967239/94‑1 (MQ=60)
TGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGC > SRR4302542.2700448/1‑94 (MQ=60)
GGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCG > SRR4302542.2342848/1‑94 (MQ=60)
GCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGT > SRR4302542.2236051/1‑94 (MQ=60)
GCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGATCGT > SRR4302542.926767/1‑94 (MQ=60)
CACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTA > SRR4302542.6696185/1‑94 (MQ=60)
ACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTAC > SRR4302542.3200406/1‑94 (MQ=60)
ACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTAC > SRR4302542.22849/1‑94 (MQ=60)
GGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGT < SRR4302542.4353021/94‑1 (MQ=60)
CGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTC > SRR4302542.194053/1‑94 (MQ=60)
GAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCT > SRR4302542.3442127/1‑94 (MQ=60)
GAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCT > SRR4302542.6019547/1‑94 (MQ=60)
AGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTA > SRR4302542.4938928/1‑94 (MQ=60)
AGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTA > SRR4302542.1577284/1‑94 (MQ=60)
AGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTA < SRR4302542.7091867/94‑1 (MQ=60)
AAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTGCTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTAC < SRR4302542.6285370/94‑1 (MQ=60)
AACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACT < SRR4302542.233766/94‑1 (MQ=60)
AACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACT < SRR4302542.4854373/94‑1 (MQ=60)
ACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTA < SRR4302542.6020231/94‑1 (MQ=60)
ACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTA < SRR4302542.2414210/94‑1 (MQ=60)
GTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACT > SRR4302542.6525551/1‑94 (MQ=60)
GTTGATACCGCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACT < SRR4302542.7322840/94‑1 (MQ=60)
TTGATCCCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCGCCGGCGAGCGTACGTTCTACTACTG < SRR4302542.1427222/94‑1 (MQ=60)
TGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGG < SRR4302542.1194106/94‑1 (MQ=60)
TGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGG < SRR4302542.4216699/94‑1 (MQ=60)
GATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGC < SRR4302542.746352/94‑1 (MQ=60)
ATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCG > SRR4302542.1594845/1‑94 (MQ=60)
ACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGA > SRR4302542.6373711/1‑94 (MQ=60)
CTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAAC > SRR4302542.2643105/1‑94 (MQ=60)
CTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAAC < SRR4302542.5670172/94‑1 (MQ=60)
CTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAAC < SRR4302542.48647/94‑1 (MQ=60)
CTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAAC > SRR4302542.881678/1‑94 (MQ=60)
CTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAAC > SRR4302542.1341667/1‑94 (MQ=60)
CTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAAC > SRR4302542.4498868/1‑94 (MQ=60)
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GCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAAC > NC_000913/3677178‑3677363
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
