Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,693,594	(C)_5→4	intergenic (‑4/+32)	yhjQ ← / ← yhjR	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,693,590	0	C	.	82.5%	926.1 / 201.2	315	coding (1/729 nt)	yhjQ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (28/27); new base . (138/122); total (166/149)
Fisher's exact test for biased strand distribution p-value = 7.69e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.43e-01

Only 100 of 333 total aligned reads displayed.

GCAGGCATCGACCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAA  >  NC_000913/3693498‑3693682

   ggcaTCGACCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCAcccc                                                                                           <  2:1731280/93‑1 (MQ=255)

    gcaTCGACCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCAcccct                                                                                          <  1:3626323/93‑2 (MQ=255)

    gcaTCGACCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCAccccc                                                                                          <  1:6868691/93‑1 (MQ=255)

      aTCGACCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCAcccctgc                                                                                        >  1:5595902/1‑90 (MQ=255)

        cGACCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTa                                                                                     <  2:5231401/93‑1 (MQ=255)

            caccaGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATccc                                                                                 >  1:5512557/1‑93 (MQ=255)

            caccaGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATccc                                                                                 >  2:4983985/1‑93 (MQ=255)

               caGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGt                                                                              <  2:388214/93‑1 (MQ=255)

                aGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTa                                                                             <  1:4421984/93‑1 (MQ=255)

                 ggACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTAc                                                                            >  2:4088566/1‑93 (MQ=255)

                 ggACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTAc                                                                            >  1:2140311/1‑93 (MQ=255)

                 ggACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTAc                                                                            >  1:383691/1‑93 (MQ=255)

                     aTTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGcc                                                                        >  1:3316969/1‑93 (MQ=255)

                      ttttCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCa                                                                       >  1:4938685/1‑93 (MQ=255)

                        ttCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCAt                                                                      >  2:6747918/1‑93 (MQ=255)

                          ctcCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTc                                                                    <  1:4537715/93‑1 (MQ=255)

                          ctcCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCa                                                                   <  2:7236036/93‑1 (MQ=255)

                           tcCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCAc                                                                  >  2:2607996/1‑93 (MQ=255)

                            cccAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCAcc                                                                 >  2:5840239/1‑93 (MQ=255)

                            cccAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCAcc                                                                 >  1:5041856/1‑93 (MQ=255)

                             ccAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCa                                                                >  2:2761461/1‑93 (MQ=255)

                              cAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCaa                                                               <  1:2177025/93‑1 (MQ=255)

                               aaCATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAAt                                                              <  1:3257218/93‑1 (MQ=255)

                                aCATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATc                                                             <  2:6322606/93‑1 (MQ=255)

                                  aTTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATccc                                                           >  2:7527806/1‑93 (MQ=255)

                                     tGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTa                                                        >  1:912154/1‑93 (MQ=255)

                                      gTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTAc                                                       <  2:6145947/93‑1 (MQ=255)

                                        aaTGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACtt                                                     <  1:7420771/93‑1 (MQ=255)

                                         aTGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACttt                                                    <  1:4845163/93‑1 (MQ=255)

                                         aTGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACAGCCATTCACCAATCCCCTACttt                                                    >  1:1544954/1‑93 (MQ=255)

                                          tGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACtttt                                                   <  2:6203593/93‑1 (MQ=255)

                                           gACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTttg                                                  >  2:1413642/1‑93 (MQ=255)

                                           gACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCACAGTACGGCCATTCACCAATCCCCTACTTttg                                                  >  2:3578790/1‑93 (MQ=255)

                                            aCCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTttgt                                                 >  2:5322233/1‑93 (MQ=255)

                                               aGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTgc                                              <  1:978155/93‑1 (MQ=255)

                                               aGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTgc                                              >  2:4647107/1‑93 (MQ=255)

                                               aGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTgc                                              <  2:1930961/93‑1 (MQ=255)

                                                ggCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTgc                                              <  2:3211131/93‑1 (MQ=255)

                                                ggCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTgc                                              <  1:6895048/93‑1 (MQ=255)

                                                 gCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTgcgc                                            <  2:3137849/93‑1 (MQ=255)

                                                 gCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTgcgc                                            <  2:6925096/93‑1 (MQ=255)

                                                  cTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCa                                           >  2:5083485/1‑93 (MQ=255)

                                                    aaTGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCaa                                          <  2:3925279/93‑1 (MQ=255)

                                                    aaTGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCaaa                                         >  2:4314687/1‑93 (MQ=255)

                                                    aaTGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCaaa                                         <  1:1899075/93‑1 (MQ=255)

                                                    aaTGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCaaa                                         <  2:2977344/93‑1 (MQ=255)

                                                     aTGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCaaa                                         >  2:2104874/1‑93 (MQ=255)

                                                     aTGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAAc                                        <  2:1567920/93‑1 (MQ=255)

                                                      tGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCaann                                        >  1:1401357/1‑91 (MQ=255)

                                                      tGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAAct                                       >  1:1201666/1‑93 (MQ=255)

                                                       gcggcgGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAAct                                       <  2:2544681/93‑1 (MQ=255)

                                                        cggcggTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAActct                                     <  1:2283388/93‑1 (MQ=255)

                                                        cggcggTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAActct                                     <  1:6523654/93‑1 (MQ=255)

                                                          gcggTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTg                                    <  2:743827/93‑1 (MQ=255)

                                                          gcggTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGc                                   >  1:4762892/1‑93 (MQ=255)

                                                          gcggTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGc                                   <  2:2260797/93‑1 (MQ=255)

                                                           cggTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGcc                                  <  1:6296704/93‑1 (MQ=255)

                                                             gTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAg                                >  2:7336986/1‑93 (MQ=255)

                                                             gTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAg                                >  2:4779622/1‑93 (MQ=255)

                                                             gTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAg                                >  1:1146790/1‑93 (MQ=255)

                                                              tGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAg                                >  2:7059094/1‑93 (MQ=255)

                                                              tGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGc                               <  2:4514700/93‑1 (MQ=255)

                                                               gATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCa                              >  1:7103634/1‑93 (MQ=255)

                                                                aTGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCaa                             <  1:1460408/93‑1 (MQ=255)

                                                                aTGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCaa                             >  1:4083283/1‑93 (MQ=255)

                                                                aTGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCaa                             <  2:6051134/93‑1 (MQ=255)

                                                                 tGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCaa                             <  2:3784338/93‑1 (MQ=255)

                                                                 tGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAAc                            <  1:2945301/93‑1 (MQ=255)

                                                                   gttgttGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACg                           >  2:35220/1‑93 (MQ=255)

                                                                    ttgttgTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACgg                          >  1:3475661/1‑93 (MQ=255)

                                                                      gttgtCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCa                       <  1:586105/93‑1 (MQ=255)

                                                                      gttgtCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCa                       <  2:6576372/93‑1 (MQ=255)

                                                                       ttgtCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAg                      <  2:5736497/93‑1 (MQ=255)

                                                                        tgtCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGc                     <  1:3150717/93‑1 (MQ=255)

                                                                          tCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGt                   <  1:2609673/93‑1 (MQ=255)

                                                                          tCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGt                   >  1:7224215/1‑93 (MQ=255)

                                                                           ccccACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGt                   <  1:3362213/93‑1 (MQ=255)

                                                                            cccACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGttt                 <  2:3340503/93‑1 (MQ=255)

                                                                            cccACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGttt                 >  2:2835804/1‑93 (MQ=255)

                                                                             ccACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGtttt                >  2:4186120/1‑93 (MQ=255)

                                                                             ccACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGtttt                >  1:4212890/1‑93 (MQ=255)

                                                                               aCGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTa               <  2:5929026/93‑1 (MQ=255)

                                                                               aCGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTaa              <  1:4824493/93‑1 (MQ=255)

                                                                               aCGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTaa              >  2:2483206/1‑93 (MQ=255)

                                                                                cGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTaa              <  1:963648/93‑1 (MQ=255)

                                                                                cGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAAt             <  2:5568582/93‑1 (MQ=255)

                                                                                  ccTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGc           <  1:2816983/93‑1 (MQ=255)

                                                                                  ccTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGc           <  1:615191/93‑1 (MQ=255)

                                                                                  ccTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGc           >  1:6695192/1‑93 (MQ=255)

                                                                                   cTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGcc          >  2:81423/1‑93 (MQ=255)

                                                                                    tCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCcg         >  2:4798608/1‑93 (MQ=255)

                                                                                    tCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCcg         <  1:5238620/93‑1 (MQ=255)

                                                                                    tCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCcg         >  1:53259/1‑93 (MQ=255)

                                                                                    tCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCcg         <  1:6573993/93‑1 (MQ=255)

                                                                                     ccccGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCcgc        <  1:469044/93‑1 (MQ=255)

                                                                                     ccccGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCcgc        <  1:1830440/93‑1 (MQ=255)

                                                                                     ccccGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCcgc        <  2:1061692/93‑1 (MQ=255)

                                                                                      cccGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCcgcg       >  2:6005811/1‑93 (MQ=255)

                                                                                      cccGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCcgcg       >  2:933837/1‑93 (MQ=255)

                                                                                          cACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGcc    >  1:7440877/1‑93 (MQ=255)

GCAGGCATCGACCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAA  >  NC_000913/3693498‑3693682

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GGCATCGACCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTT  >  NC_000913/3693501‑3693687

GGCATCGACCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCT                                                                                               <  SRR4302542.974847/94‑1 (MQ=60)

 GCATCGACCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCT                                                                                              <  SRR4302542.6936163/94‑1 (MQ=60)

  CATCGACCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGC                                                                                            >  SRR4302542.5650274/1‑94 (MQ=60)

   ATCGACCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGC                                                                                            >  SRR4302542.1702843/1‑94 (MQ=60)

   ATCGACCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGC                                                                                            >  SRR4302542.3354299/1‑94 (MQ=60)

   ATCGACCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCT                                                                                           <  SRR4302542.4795413/94‑1 (MQ=60)

   ATCGACCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCT                                                                                           >  SRR4302542.5300997/1‑94 (MQ=60)

   ATCGACCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCT                                                                                           >  SRR4302542.4882690/1‑94 (MQ=60)

   ATCGACCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCT                                                                                           <  SRR4302542.143046/94‑1 (MQ=60)

    TCGACCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCT                                                                                           <  SRR4302542.5049166/94‑1 (MQ=60)

    TCGACCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTA                                                                                          <  SRR4302542.7527603/94‑1 (MQ=60)

     CGACCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTAT                                                                                         >  SRR4302542.3904138/1‑94 (MQ=60)

     CGACCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTAT                                                                                         >  SRR4302542.6845141/1‑94 (MQ=60)

     CGACCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTAT                                                                                         <  SRR4302542.3531080/94‑1 (MQ=60)

        CCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCC                                                                                      <  SRR4302542.964100/94‑1 (MQ=60)

        CCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCC                                                                                      >  SRR4302542.5566128/1‑94 (MQ=60)

         CACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCA                                                                                     >  SRR4302542.1413956/1‑94 (MQ=60)

         CACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCA                                                                                     >  SRR4302542.7473058/1‑94 (MQ=60)

         CACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCA                                                                                     >  SRR4302542.7244594/1‑94 (MQ=60)

         CACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCA                                                                                     >  SRR4302542.2040683/1‑94 (MQ=60)

          ACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCTAG                                                                                    >  SRR4302542.6832853/1‑94 (MQ=60)

          ACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAG                                                                                    >  SRR4302542.3750854/1‑94 (MQ=60)

          ACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAG                                                                                    <  SRR4302542.6328797/94‑1 (MQ=60)

          ACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAG                                                                                    <  SRR4302542.2201024/94‑1 (MQ=60)

           CCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAG                                                                                    <  SRR4302542.1887620/94‑1 (MQ=60)

           CCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAG                                                                                    <  SRR4302542.1390267/94‑1 (MQ=60)

           CCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGT                                                                                   >  SRR4302542.2957775/1‑94 (MQ=60)

            CAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTA                                                                                  >  SRR4302542.4384142/1‑94 (MQ=60)

             AGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTAC                                                                                 <  SRR4302542.7511663/94‑1 (MQ=60)

             AGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTAC                                                                                 <  SRR4302542.6603009/94‑1 (MQ=60)

             AGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTAC                                                                                 >  SRR4302542.387024/1‑94 (MQ=60)

             AGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTAC                                                                                 >  SRR4302542.6743102/1‑94 (MQ=60)

             AGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTAC                                                                                 <  SRR4302542.4465416/94‑1 (MQ=60)

             AGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTAC                                                                                 >  SRR4302542.1193884/1‑94 (MQ=60)

             AGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTAC                                                                                 >  SRR4302542.2158779/1‑94 (MQ=60)

              GGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACG                                                                                <  SRR4302542.4875987/94‑1 (MQ=60)

               GACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGG                                                                               >  SRR4302542.5275839/1‑94 (MQ=60)

                ACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGG                                                                               >  SRR4302542.5300172/1‑94 (MQ=60)

                 CATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCC                                                                             <  SRR4302542.1375400/94‑1 (MQ=60)

                 CATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCC                                                                             >  SRR4302542.3348221/1‑94 (MQ=60)

                 CATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCC                                                                             <  SRR4302542.6358975/94‑1 (MQ=60)

                  ATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCA                                                                            >  SRR4302542.220340/1‑94 (MQ=60)

                  ATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCA                                                                            >  SRR4302542.4986686/1‑94 (MQ=60)

                    TTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATT                                                                          >  SRR4302542.2984102/1‑94 (MQ=60)

                     TTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATT                                                                          <  SRR4302542.2846167/94‑1 (MQ=60)

                       CTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCA                                                                        <  SRR4302542.4582147/94‑1 (MQ=60)

                       CTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCAC                                                                       <  SRR4302542.4648411/94‑1 (MQ=60)

                        TCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACC                                                                      >  SRR4302542.5090795/1‑94 (MQ=60)

                        TCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACC                                                                      >  SRR4302542.3510814/1‑94 (MQ=60)

                         CCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCA                                                                     >  SRR4302542.7082527/1‑94 (MQ=60)

                           CAACATTTGTAATGACCCGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAAT                                                                   >  SRR4302542.3332929/1‑94 (MQ=60)

                           CAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAA                                                                    <  SRR4302542.6686782/94‑1 (MQ=60)

                           CAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAAT                                                                   >  SRR4302542.3978145/1‑94 (MQ=60)

                           CAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAAT                                                                   >  SRR4302542.1933334/1‑94 (MQ=60)

                           CAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAAT                                                                   <  SRR4302542.2195756/94‑1 (MQ=60)

                            AACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAAT                                                                   >  SRR4302542.7511094/1‑94 (MQ=60)

                            AACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAAT                                                                   >  SRR4302542.5529873/1‑94 (MQ=60)

                            AACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATC                                                                  <  SRR4302542.3287986/94‑1 (MQ=60)

                            AACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATC                                                                  >  SRR4302542.4512193/1‑94 (MQ=60)

                             ACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCC                                                                 >  SRR4302542.829083/1‑94 (MQ=60)

                             ACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCC                                                                 <  SRR4302542.4856628/94‑1 (MQ=60)

                              CATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCC                                                                >  SRR4302542.539796/1‑94 (MQ=60)

                               ATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCC                                                               >  SRR4302542.5096045/1‑94 (MQ=60)

                               ATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCC                                                               <  SRR4302542.4764539/94‑1 (MQ=60)

                                 TTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTA                                                             >  SRR4302542.920018/1‑94 (MQ=60)

                                  TGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTAC                                                            >  SRR4302542.1882240/1‑94 (MQ=60)

                                   GTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACT                                                           <  SRR4302542.6023610/94‑1 (MQ=60)

                                    TAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTT                                                          <  SRR4302542.3282844/94‑1 (MQ=60)

                                     AATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTT                                                         <  SRR4302542.7493380/94‑1 (MQ=60)

                                     AATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACAGCCATTCACCAATCCCCTACTTT                                                         >  SRR4302542.1558285/1‑94 (MQ=60)

                                      ATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTT                                                        <  SRR4302542.4892347/94‑1 (MQ=60)

                                      ATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTT                                                        >  SRR4302542.2170498/1‑94 (MQ=60)

                                        GACCAGGCTAATGCGGCGGGGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGT                                                      >  SRR4302542.7098038/1‑94 (MQ=60)

                                           CAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTG                                                    >  SRR4302542.3011677/1‑94 (MQ=60)

                                            AGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGC                                                   >  SRR4302542.4561746/1‑94 (MQ=60)

                                            AGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAACCCCCTACTTTTGTTGC                                                   >  SRR4302542.5977821/1‑94 (MQ=60)

                                            AGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCG                                                  <  SRR4302542.3810175/94‑1 (MQ=60)

                                            AGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCG                                                  >  SRR4302542.7274937/1‑94 (MQ=60)

                                            AGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCG                                                  >  SRR4302542.979791/1‑94 (MQ=60)

                                            AGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCG                                                  <  SRR4302542.986587/94‑1 (MQ=60)

                                            AGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCG                                                  >  SRR4302542.5915786/1‑94 (MQ=60)

                                             GGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCG                                                  <  SRR4302542.6962757/94‑1 (MQ=60)

                                             GGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGC                                                 <  SRR4302542.571205/94‑1 (MQ=60)

                                             GGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGC                                                 >  SRR4302542.3127281/1‑94 (MQ=60)

                                              GCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGC                                                 <  SRR4302542.7432373/94‑1 (MQ=60)

                                              GCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCCCA‑CCCCTGCTATCCCAGTACGGCCCTTCACCAATCCCCTACTTTTGTTGCGCA                                                >  SRR4302542.4127475/1‑94 (MQ=60)

                                               CTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCA                                                >  SRR4302542.1190608/1‑94 (MQ=60)

                                               CTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAA                                               >  SRR4302542.3368963/1‑94 (MQ=60)

                                               CTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAA                                               >  SRR4302542.6946667/1‑94 (MQ=60)

                                                 AATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAAC                                             <  SRR4302542.1915499/94‑1 (MQ=60)

                                                  ATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAANN                                             >  SRR4302542.1413473/1‑94 (MQ=60)

                                                  ATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACT                                            >  SRR4302542.1212009/1‑94 (MQ=60)

                                                  ATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACT                                            <  SRR4302542.7193882/94‑1 (MQ=60)

                                                  ATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACT                                            <  SRR4302542.2071110/94‑1 (MQ=60)

                                                  ATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACT                                            <  SRR4302542.1533358/94‑1 (MQ=60)

                                                    GCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCT                                          <  SRR4302542.6419992/94‑1 (MQ=60)

                                                     CGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCT                                          <  SRR4302542.4929982/94‑1 (MQ=60)

                                                     CGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTG                                         <  SRR4302542.958378/94‑1 (MQ=60)

                                                     CGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTG                                         <  SRR4302542.4156213/94‑1 (MQ=60)

                                                     CGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTG                                         <  SRR4302542.2303012/94‑1 (MQ=60)

                                                     CGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTG                                         <  SRR4302542.6587939/94‑1 (MQ=60)

                                                      GGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGC                                        >  SRR4302542.4809324/1‑94 (MQ=60)

                                                       GCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCC                                       <  SRR4302542.6543539/94‑1 (MQ=60)

                                                       GCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCC                                       <  SRR4302542.535918/94‑1 (MQ=60)

                                                        CGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCA                                      >  SRR4302542.5873997/1‑94 (MQ=60)

                                                        CGGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCA                                      <  SRR4302542.6358742/94‑1 (MQ=60)

                                                         GGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAG                                     <  SRR4302542.6294411/94‑1 (MQ=60)

                                                         GGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAG                                     >  SRR4302542.1156611/1‑94 (MQ=60)

                                                         GGTGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAG                                     <  SRR4302542.4855288/94‑1 (MQ=60)

                                                          gggaatGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAG                                     <  SRR4302542.3690941/88‑1 (MQ=60)

                                                           TGATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCA                                   >  SRR4302542.7173365/1‑94 (MQ=60)

                                                            GATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAA                                  >  SRR4302542.4123523/1‑94 (MQ=60)

                                                            GATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAA                                  >  SRR4302542.5618964/1‑94 (MQ=60)

                                                             ATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAAC                                 >  SRR4302542.6903238/1‑94 (MQ=60)

                                                             ATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAAC                                 <  SRR4302542.6597142/94‑1 (MQ=60)

                                                             ATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAAC                                 >  SRR4302542.240172/1‑94 (MQ=60)

                                                             ATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAAC                                 <  SRR4302542.2175055/94‑1 (MQ=60)

                                                             ATGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAAC                                 <  SRR4302542.1473016/94‑1 (MQ=60)

                                                              TGGTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACG                                <  SRR4302542.2973499/94‑1 (MQ=60)

                                                               GGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACG                                <  SRR4302542.4965105/94‑1 (MQ=60)

                                                               GGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACG                                >  SRR4302542.2792162/1‑94 (MQ=60)

                                                                GTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGG                               >  SRR4302542.3508195/1‑94 (MQ=60)

                                                                GTTGTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGC                              <  SRR4302542.1618205/94‑1 (MQ=60)

                                                                   GTTGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAG                           <  SRR4302542.591162/94‑1 (MQ=60)

                                                                     TGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGC                          >  SRR4302542.243334/1‑94 (MQ=60)

                                                                     TGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCG                         <  SRR4302542.3180639/94‑1 (MQ=60)

                                                                     TGTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCG                         <  SRR4302542.2795736/94‑1 (MQ=60)

                                                                      GTCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGT                        >  SRR4302542.7295079/1‑94 (MQ=60)

                                                                       TCCCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTT                       <  SRR4302542.2634902/94‑1 (MQ=60)

                                                                        CCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTT                       <  SRR4302542.3393809/94‑1 (MQ=60)

                                                                         CCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTT                     >  SRR4302542.4254409/1‑94 (MQ=60)

                                                                         CCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTT                     >  SRR4302542.3845427/1‑94 (MQ=60)

                                                                         CCCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTT                     <  SRR4302542.4649800/94‑1 (MQ=60)

                                                                          CCACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTA                    >  SRR4302542.4405744/1‑94 (MQ=60)

                                                                            ACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAAT                  <  SRR4302542.4871510/94‑1 (MQ=60)

                                                                            ACGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAAT                  <  SRR4302542.475357/94‑1 (MQ=60)

                                                                             CGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAAT                  <  SRR4302542.971922/94‑1 (MQ=60)

                                                                             CGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATG                 <  SRR4302542.1514767/94‑1 (MQ=60)

                                                                             CGCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATG                 <  SRR4302542.3246815/94‑1 (MQ=60)

                                                                              GCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATG                 <  SRR4302542.1532352/94‑1 (MQ=60)

                                                                              GCCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGC                >  SRR4302542.6761179/1‑94 (MQ=60)

                                                                               CCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCC               <  SRR4302542.3432053/94‑1 (MQ=60)

                                                                               CCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCC               <  SRR4302542.2844080/94‑1 (MQ=60)

                                                                               CCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCC               <  SRR4302542.620476/94‑1 (MQ=60)

                                                                               CCTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCC               >  SRR4302542.4367677/1‑94 (MQ=60)

                                                                                CTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCC               >  SRR4302542.5568538/1‑94 (MQ=60)

                                                                                CTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCG              >  SRR4302542.3337226/1‑94 (MQ=60)

                                                                                CTCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCG              >  SRR4302542.53690/1‑94 (MQ=60)

                                                                                 TCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGC             <  SRR4302542.6638768/94‑1 (MQ=60)

                                                                                 TCCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGC             <  SRR4302542.5289550/94‑1 (MQ=60)

                                                                                  CCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCG            <  SRR4302542.1846296/94‑1 (MQ=60)

                                                                                  CCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCG            >  SRR4302542.4951686/1‑94 (MQ=60)

                                                                                  CCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCG            <  SRR4302542.473111/94‑1 (MQ=60)

                                                                                  CCCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCG            <  SRR4302542.6945218/94‑1 (MQ=60)

                                                                                   CCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCG            <  SRR4302542.2393164/94‑1 (MQ=60)

                                                                                   CCCGCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGG           <  SRR4302542.3440007/94‑1 (MQ=60)

                                                                                      GCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCC         >  SRR4302542.7513739/1‑94 (MQ=60)

                                                                                      GCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCA        >  SRR4302542.5447829/1‑94 (MQ=60)

                                                                                      GCA‑CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCA        >  SRR4302542.7040008/1‑94 (MQ=60)

                                                                                         CCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAAC      <  SRR4302542.5088277/94‑1 (MQ=60)

                                                                                         ACCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAAC      >  SRR4302542.6638330/1‑94 (MQ=60)

                                                                                         ACCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAAC      >  SRR4302542.1432959/1‑94 (MQ=60)

                                                                                         ACCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAAC      >  SRR4302542.4648883/1‑94 (MQ=60)

                                                                                         ACCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAAC      >  SRR4302542.5675106/1‑94 (MQ=60)

                                                                                          CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACT     <  SRR4302542.2813818/94‑1 (MQ=60)

                                                                                          CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACT     <  SRR4302542.5812980/94‑1 (MQ=60)

                                                                                          CCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACT     <  SRR4302542.5622767/94‑1 (MQ=60)

                                                                                           CCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTG    >  SRR4302542.5400739/1‑94 (MQ=60)

                                                                                            CCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGT   <  SRR4302542.4017874/94‑1 (MQ=60)

                                                                                             CTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTT  <  SRR4302542.5364849/94‑1 (MQ=60)

                                                                                             CTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTT  >  SRR4302542.1787938/1‑94 (MQ=60)

                                                                                             CTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTT  <  SRR4302542.424551/94‑1 (MQ=60)

                                                                                             CTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTT  >  SRR4302542.138918/1‑94 (MQ=60)

GGCATCGACCACCAGGACATTTTCTCCCAACATTTGTAATGACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTT  >  NC_000913/3693501‑3693687

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`