Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,706,723	T→C	Y472C (TAC→TGC)	yhjW ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,706,723	0	T	C	85.6%	764.8 / 112.6	319	Y472C (TAC→TGC)	yhjW	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (21/25); new base C (99/174); total (120/199)
Fisher's exact test for biased strand distribution p-value = 2.51e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.37e-01

Only 100 of 324 total aligned reads displayed.

TCGGTACGCGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGAGTTGAT  >  NC_000913/3706631‑3706814

  ggTACGCGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAg                                                                                           >  1:1253156/1‑93 (MQ=255)

  ggTACGCGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAg                                                                                           <  1:1034745/93‑1 (MQ=255)

   gTACGCGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGa                                                                                          >  2:2990912/1‑93 (MQ=255)

   gTACGCGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGa                                                                                          <  1:4236841/93‑1 (MQ=255)

     aCGCGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAac                                                                                        <  2:43387/93‑1 (MQ=255)

     aCGCGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAac                                                                                        <  2:3047156/93‑1 (MQ=255)

       gcgGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAacac                                                                                      <  2:5442279/93‑1 (MQ=255)

        cgGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAAcaca                                                                                     >  2:7230602/1‑93 (MQ=255)

        cgGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAAcaca                                                                                     <  2:5843113/93‑1 (MQ=255)

         ggAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACaa                                                                                    >  1:6179424/1‑93 (MQ=255)

         ggAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACaa                                                                                    >  2:7507838/1‑93 (MQ=255)

         ggAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACaa                                                                                    <  1:1406951/93‑1 (MQ=255)

          gAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAAt                                                                                   <  2:6986137/93‑1 (MQ=255)

          gAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAAt                                                                                   >  2:5740633/1‑93 (MQ=255)

           aaCTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATc                                                                                  <  2:5663260/93‑1 (MQ=255)

            aCTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCg                                                                                 >  2:1016882/1‑93 (MQ=255)

             cTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGc                                                                                >  1:4652758/1‑93 (MQ=255)

             cTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGc                                                                                <  2:6744960/93‑1 (MQ=255)

              tGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCt                                                                               >  2:4960766/1‑93 (MQ=255)

              tGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCt                                                                               >  1:2814855/1‑93 (MQ=255)

                cTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCttt                                                                             <  1:3518932/93‑1 (MQ=255)

                 tCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTTGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTc                                                                            <  2:535181/93‑1 (MQ=255)

                  ccGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCt                                                                           <  1:6301965/93‑1 (MQ=255)

                   cggcggTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAGCACAATCGCTTTCtt                                                                          <  1:2845607/93‑1 (MQ=255)

                   cggcggTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCtt                                                                          >  2:6139091/1‑93 (MQ=255)

                    ggctgTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGTTCAGCTGCGCAGAACACAATCGCTTTCTTa                                                                         <  1:4715916/93‑1 (MQ=255)

                     gcggTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTAt                                                                        <  2:3824503/93‑1 (MQ=255)

                       ggTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATcg                                                                      >  2:828503/1‑93 (MQ=255)

                        gTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATcgc                                                                     <  1:4555470/93‑1 (MQ=255)

                        gTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATcgc                                                                     <  2:4018656/93‑1 (MQ=255)

                           ccAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGaa                                                                  >  1:1521840/1‑93 (MQ=255)

                            cAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAAc                                                                 >  1:701963/1‑93 (MQ=255)

                             aGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAAcc                                                                >  2:1061729/1‑93 (MQ=255)

                             aGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAAcc                                                                <  1:177309/93‑1 (MQ=255)

                               ttCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTg                                                              >  1:5091484/1‑93 (MQ=255)

                               ttCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTg                                                              >  2:2686889/1‑93 (MQ=255)

                                tCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGa                                                             <  2:4100121/93‑1 (MQ=255)

                                 cACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGat                                                            <  2:7126599/93‑1 (MQ=255)

                                 cACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGat                                                            <  1:3646908/93‑1 (MQ=255)

                                 cACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCACAACACAATCGCTTTCTTATCGCGAACCTGat                                                            <  1:489141/93‑1 (MQ=255)

                                  aCGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGatc                                                           >  2:5286674/1‑93 (MQ=255)

                                    gcggcgTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGatcaa                                                         <  1:3459615/93‑1 (MQ=255)

                                     cggcgTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGatcaat                                                        >  2:6222961/1‑93 (MQ=255)

                                     cggcgTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGatcaat                                                        >  1:2097532/1‑93 (MQ=255)

                                     cggcgTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGatcaat                                                        <  2:7340705/93‑1 (MQ=255)

                                      ggcgTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGatcaatc                                                       <  1:1985638/93‑1 (MQ=255)

                                      ggcgTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGatcaatc                                                       <  1:5983455/93‑1 (MQ=255)

                                       gcgTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGatcaatca                                                      <  2:5962295/93‑1 (MQ=255)

                                       gcgTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGatcaatca                                                      <  1:2533100/93‑1 (MQ=255)

                                       gcgTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGatcaatca                                                      >  1:409533/1‑93 (MQ=255)

                                        cgtgccgtgcAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCAc                                                     <  1:5951544/93‑1 (MQ=255)

                                        cgtgccgtgcAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCAc                                                     >  1:5257296/1‑93 (MQ=255)

                                        cgtgccgtgcAGGTGCTCGCGTTCATTAATCGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCAc                                                     <  1:3269393/93‑1 (MQ=255)

                                         gtgccgtgcAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACg                                                    >  1:1306097/1‑93 (MQ=255)

                                           gccgtgcAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCt                                                  <  1:6897397/93‑1 (MQ=255)

                                            ccgtgcAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTg                                                 <  2:6455557/93‑1 (MQ=255)

                                              gtgcAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGga                                               <  2:2638823/93‑1 (MQ=255)

                                                gcAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGgaga                                             <  1:4287447/93‑1 (MQ=255)

                                                  aGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATa                                           >  2:7422067/1‑93 (MQ=255)

                                                  aGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATa                                           <  1:2626956/93‑1 (MQ=255)

                                                      gCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGt                                       <  1:5865580/93‑1 (MQ=255)

                                                      gCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGt                                       <  2:4823600/93‑1 (MQ=255)

                                                      gCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGt                                       <  1:754861/93‑1 (MQ=255)

                                                       cTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTg                                      <  1:6734767/93‑1 (MQ=255)

                                                         cgcgTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGAt                                    <  1:6034101/93‑1 (MQ=255)

                                                          gcgTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATc                                   <  2:6105467/93‑1 (MQ=255)

                                                          gcgTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATc                                   >  1:2465828/1‑93 (MQ=255)

                                                           cgTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATcc                                  >  1:732232/1‑93 (MQ=255)

                                                           cgTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATcc                                  <  1:5533208/93‑1 (MQ=255)

                                                            gTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCca                                 >  1:6948276/1‑93 (MQ=255)

                                                            gTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCca                                 >  2:1909214/1‑93 (MQ=255)

                                                             ttCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCcac                                >  2:2385036/1‑93 (MQ=255)

                                                              tCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCcaca                               <  2:1607577/93‑1 (MQ=255)

                                                              tCATTAATCGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCcaca                               <  2:3740003/93‑1 (MQ=255)

                                                               cATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACAt                              <  2:3611660/93‑1 (MQ=255)

                                                                aTTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATa                             <  1:3932045/93‑1 (MQ=255)

                                                                aTTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATa                             <  1:4951471/93‑1 (MQ=255)

                                                                 ttAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAg                            <  2:3344505/93‑1 (MQ=255)

                                                                 ttAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAg                            >  1:1831642/1‑93 (MQ=255)

                                                                 ttAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAg                            >  1:6534375/1‑93 (MQ=255)

                                                                  tAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAgg                           <  2:144101/93‑1 (MQ=255)

                                                                   aaTTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGt                          <  1:448554/93‑1 (MQ=255)

                                                                   aaTTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGt                          >  2:2773933/1‑93 (MQ=255)

                                                                    aTTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTc                         <  1:2936801/93‑1 (MQ=255)

                                                                     ttGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCa                        >  2:422498/1‑93 (MQ=255)

                                                                      tGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCAc                       <  1:2279404/93‑1 (MQ=255)

                                                                       gNCTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGAGCCACATAGGTCAcn                      <  2:5194796/93‑2 (MQ=255)

                                                                         cTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGa                    <  1:315532/93‑1 (MQ=255)

                                                                          tCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAg                   >  2:6560557/1‑93 (MQ=255)

                                                                               gTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTc              <  2:2136916/93‑1 (MQ=255)

                                                                                tGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCa             <  1:2713214/93‑1 (MQ=255)

                                                                                tGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCa             >  2:6903902/1‑93 (MQ=255)

                                                                                   tCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAg          <  1:3819950/93‑1 (MQ=255)

                                                                                    cAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAgg         <  1:4396149/93‑1 (MQ=255)

                                                                                      gCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGAg       >  2:6384791/1‑93 (MQ=255)

                                                                                       cTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGAGt      <  1:5673707/93‑1 (MQ=255)

                                                                                       cTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGAGt      <  1:6373464/93‑1 (MQ=255)

                                                                                        tGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGAGtt     >  2:1917856/1‑93 (MQ=255)

                                                                                         gcgcAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGAGTTg    >  1:889669/1‑93 (MQ=255)

                                                                                         gCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGAGTTg    <  2:233368/93‑1 (MQ=255)

TCGGTACGCGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGAGTTGAT  >  NC_000913/3706631‑3706814

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

ATCGGTACGCGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGAGTTGATCA  >  NC_000913/3706630‑3706816

ATCGGTACGCGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGT                                                                                               >  SRR4302542.4236117/1‑94 (MQ=60)

ATCGGTACGCGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGC                                                                                               <  SRR4302542.34851/94‑1 (MQ=60)

ATCGGTACGCGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGC                                                                                               >  SRR4302542.7424546/1‑94 (MQ=60)

 TCGGTACGCGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTA                                                                                              <  SRR4302542.4796287/94‑1 (MQ=60)

  CGGTACGCGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAG                                                                                             >  SRR4302542.1263940/1‑94 (MQ=60)

  CGGTACGCGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAG                                                                                             >  SRR4302542.7389527/1‑94 (MQ=60)

   GGTACGCGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGA                                                                                            <  SRR4302542.1043636/94‑1 (MQ=60)

   GGTACGCGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGA                                                                                            <  SRR4302542.1536088/94‑1 (MQ=60)

    GTACGCGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAA                                                                                           >  SRR4302542.7041673/1‑94 (MQ=60)

    GTACGCGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAA                                                                                           <  SRR4302542.6093096/94‑1 (MQ=60)

    GTACGCGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAA                                                                                           <  SRR4302542.4278563/94‑1 (MQ=60)

    GTACGCGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGCGGTCAGCTGCGCAGAA                                                                                           >  SRR4302542.3137690/1‑94 (MQ=60)

        GCGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACA                                                                                       <  SRR4302542.2211899/94‑1 (MQ=60)

         CGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAA                                                                                      >  SRR4302542.6239347/1‑94 (MQ=60)

         CGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAA                                                                                      <  SRR4302542.1790961/94‑1 (MQ=60)

         CGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAA                                                                                      >  SRR4302542.230376/1‑94 (MQ=60)

         CGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAA                                                                                      <  SRR4302542.421673/94‑1 (MQ=60)

          GGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAAT                                                                                     <  SRR4302542.3283421/94‑1 (MQ=60)

          GGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAAT                                                                                     <  SRR4302542.1419116/94‑1 (MQ=60)

          GGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAAT                                                                                     <  SRR4302542.5069634/94‑1 (MQ=60)

           GAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATC                                                                                    <  SRR4302542.6766289/94‑1 (MQ=60)

           GAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATC                                                                                    <  SRR4302542.464488/94‑1 (MQ=60)

            AACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCG                                                                                   >  SRR4302542.3826815/1‑94 (MQ=60)

             ACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGC                                                                                  >  SRR4302542.3505108/1‑94 (MQ=60)

             ACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGC                                                                                  >  SRR4302542.4698242/1‑94 (MQ=60)

              CTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCT                                                                                 <  SRR4302542.4895056/94‑1 (MQ=60)

              CTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCT                                                                                 >  SRR4302542.2841939/1‑94 (MQ=60)

              CTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCT                                                                                 >  SRR4302542.593197/1‑94 (MQ=60)

              CTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCT                                                                                 >  SRR4302542.1795813/1‑94 (MQ=60)

                 CTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTC                                                                              <  SRR4302542.3519806/94‑1 (MQ=60)

                 CTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTC                                                                              <  SRR4302542.3551824/94‑1 (MQ=60)

                  TCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCT                                                                             <  SRR4302542.2872864/94‑1 (MQ=60)

                   CCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTT                                                                            >  SRR4302542.507645/1‑94 (MQ=60)

                   CCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTT                                                                            <  SRR4302542.6364051/94‑1 (MQ=60)

                    CGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAGCACAATCGCTTTCTTA                                                                           <  SRR4302542.2872954/94‑1 (MQ=60)

                     GGCTGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGTTCAGCTGCGCAGAACACAATCGCTTTCTTAT                                                                          <  SRR4302542.4761887/94‑1 (MQ=60)

                     GGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTAT                                                                          <  SRR4302542.419601/94‑1 (MQ=60)

                     GGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTAT                                                                          <  SRR4302542.6024108/94‑1 (MQ=60)

                     GGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTAT                                                                          <  SRR4302542.4123612/94‑1 (MQ=60)

                     GGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTAT                                                                          <  SRR4302542.2457996/94‑1 (MQ=60)

                     GGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTAT                                                                          <  SRR4302542.4739042/94‑1 (MQ=60)

                     GGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTAT                                                                          <  SRR4302542.4324608/94‑1 (MQ=60)

                      GCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATC                                                                         <  SRR4302542.3563500/94‑1 (MQ=60)

                       CGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCG                                                                        >  SRR4302542.1864815/1‑94 (MQ=60)

                        GGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGC                                                                       >  SRR4302542.6027439/1‑94 (MQ=60)

                         GTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCG                                                                      <  SRR4302542.4600042/94‑1 (MQ=60)

                         GTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCG                                                                      <  SRR4302542.1483049/94‑1 (MQ=60)

                         GTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCG                                                                      >  SRR4302542.4726715/1‑94 (MQ=60)

                           GCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAA                                                                    >  SRR4302542.1534987/1‑94 (MQ=60)

                            CCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAAC                                                                   >  SRR4302542.708043/1‑94 (MQ=60)

                            CCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAAC                                                                   <  SRR4302542.2676932/94‑1 (MQ=60)

                             CAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACC                                                                  <  SRR4302542.3225248/94‑1 (MQ=60)

                              AGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCT                                                                 <  SRR4302542.2124972/94‑1 (MQ=60)

                              AGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCT                                                                 <  SRR4302542.178815/94‑1 (MQ=60)

                              AGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCT                                                                 >  SRR4302542.6426419/1‑94 (MQ=60)

                               GTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTG                                                                <  SRR4302542.2534499/94‑1 (MQ=60)

                               GTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTG                                                                <  SRR4302542.5071657/94‑1 (MQ=60)

                               GTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTG                                                                >  SRR4302542.2855749/1‑94 (MQ=60)

                               GTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTG                                                                <  SRR4302542.4597330/94‑1 (MQ=60)

                               GTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTG                                                                >  SRR4302542.5140968/1‑94 (MQ=60)

                               GTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTG                                                                >  SRR4302542.7066699/1‑94 (MQ=60)

                                  CACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATC                                                             <  SRR4302542.3680955/94‑1 (MQ=60)

                                  CACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATC                                                             <  SRR4302542.1374288/94‑1 (MQ=60)

                                  CACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATC                                                             >  SRR4302542.6206932/1‑94 (MQ=60)

                                  CACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCACAACACAATCGCTTTCTTATCGCGAACCTGATC                                                             <  SRR4302542.493365/94‑1 (MQ=60)

                                   ACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCA                                                            <  SRR4302542.6080638/94‑1 (MQ=60)

                                     GCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAAT                                                          <  SRR4302542.3492009/94‑1 (MQ=60)

                                     GCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAAT                                                          >  SRR4302542.636749/1‑94 (MQ=60)

                                     GCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAAT                                                          >  SRR4302542.2115645/1‑94 (MQ=60)

                                       GGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCA                                                        <  SRR4302542.6041416/94‑1 (MQ=60)

                                       GGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCA                                                        <  SRR4302542.2002771/94‑1 (MQ=60)

                                       GGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCA                                                        <  SRR4302542.170135/94‑1 (MQ=60)

                                       GGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCA                                                        >  SRR4302542.413065/1‑94 (MQ=60)

                                       GGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCA                                                        <  SRR4302542.2496593/94‑1 (MQ=60)

                                       GGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGCGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCA                                                        <  SRR4302542.7446358/94‑1 (MQ=60)

                                        GCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCAC                                                       <  SRR4302542.678760/94‑1 (MQ=60)

                                        GCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCAC                                                       >  SRR4302542.5308393/1‑94 (MQ=60)

                                        GCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCAC                                                       <  SRR4302542.2557675/94‑1 (MQ=60)

                                         CGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACG                                                      >  SRR4302542.1317356/1‑94 (MQ=60)

                                         CGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACG                                                      <  SRR4302542.6009183/94‑1 (MQ=60)

                                         CGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACG                                                      <  SRR4302542.4635437/94‑1 (MQ=60)

                                         CGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACG                                                      <  SRR4302542.4390367/94‑1 (MQ=60)

                                         CGTGCCGTGCAGGTGCTCGCGTTCATTAATCGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACG                                                      <  SRR4302542.3300252/94‑1 (MQ=60)

                                          GTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGC                                                     <  SRR4302542.6052630/94‑1 (MQ=60)

                                           ctgagagttGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCT                                                    <  SRR4302542.6522790/85‑1 (MQ=60)

                                           TGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCT                                                    <  SRR4302542.4300589/94‑1 (MQ=60)

                                           TGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCT                                                    <  SRR4302542.2887454/94‑1 (MQ=60)

                                           TGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCT                                                    <  SRR4302542.6336766/94‑1 (MQ=60)

                                           TGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCT                                                    <  SRR4302542.5839857/94‑1 (MQ=60)

                                            GCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTG                                                   <  SRR4302542.6965126/94‑1 (MQ=60)

                                             CCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGG                                                  >  SRR4302542.4598700/1‑94 (MQ=60)

                                               GTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAG                                                >  SRR4302542.1275001/1‑94 (MQ=60)

                                               GTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAG                                                <  SRR4302542.5977291/94‑1 (MQ=60)

                                                TGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGA                                               >  SRR4302542.6996180/1‑94 (MQ=60)

                                                TGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGA                                               <  SRR4302542.30481/94‑1 (MQ=60)

                                                 GCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGAT                                              <  SRR4302542.4329615/94‑1 (MQ=60)

                                                  CAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATA                                             >  SRR4302542.2939552/1‑94 (MQ=60)

                                                   AGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAA                                            >  SRR4302542.3753762/1‑94 (MQ=60)

                                                   AGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAA                                            <  SRR4302542.2652335/94‑1 (MQ=60)

                                                     GTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAG                                          <  SRR4302542.6933224/94‑1 (MQ=60)

                                                      TGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGT                                         <  SRR4302542.6526720/94‑1 (MQ=60)

                                                      TGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGT                                         <  SRR4302542.5704055/94‑1 (MQ=60)

                                                      TGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGT                                         <  SRR4302542.3132191/94‑1 (MQ=60)

                                                       GCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTG                                        <  SRR4302542.5922444/94‑1 (MQ=60)

                                                       GCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTG                                        <  SRR4302542.761392/94‑1 (MQ=60)

                                                       GCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTG                                        <  SRR4302542.107031/94‑1 (MQ=60)

                                                       GCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTG                                        <  SRR4302542.1292763/94‑1 (MQ=60)

                                                        CTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGA                                       <  SRR4302542.1337483/94‑1 (MQ=60)

                                                        CTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGA                                       <  SRR4302542.6801060/94‑1 (MQ=60)

                                                         TCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGAT                                      >  SRR4302542.1481165/1‑94 (MQ=60)

                                                          CGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATC                                     <  SRR4302542.6092519/94‑1 (MQ=60)

                                                          CGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATC                                     >  SRR4302542.2577970/1‑94 (MQ=60)

                                                          CGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATC                                     <  SRR4302542.2650467/94‑1 (MQ=60)

                                                          CGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATC                                     >  SRR4302542.2489769/1‑94 (MQ=60)

                                                           GCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCC                                    <  SRR4302542.843739/94‑1 (MQ=60)

                                                           GCGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCC                                    >  SRR4302542.738571/1‑94 (MQ=60)

                                                            CGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCA                                   >  SRR4302542.7016548/1‑94 (MQ=60)

                                                            CGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCA                                   >  SRR4302542.6983782/1‑94 (MQ=60)

                                                            CGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCA                                   >  SRR4302542.2795029/1‑94 (MQ=60)

                                                            CGTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCA                                   <  SRR4302542.5586988/94‑1 (MQ=60)

                                                             GTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCAC                                  >  SRR4302542.1863173/1‑94 (MQ=60)

                                                             GTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCAC                                  >  SRR4302542.2660673/1‑94 (MQ=60)

                                                             GTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCAC                                  >  SRR4302542.7236128/1‑94 (MQ=60)

                                                             GTTCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCAC                                  >  SRR4302542.5317376/1‑94 (MQ=60)

                                                               TCATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACAT                                <  SRR4302542.3962902/94‑1 (MQ=60)

                                                                CATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATA                               <  SRR4302542.336073/94‑1 (MQ=60)

                                                                 ATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAG                              >  SRR4302542.6598784/1‑94 (MQ=60)

                                                                 ATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAG                              <  SRR4302542.4999582/94‑1 (MQ=60)

                                                                 ATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAG                              <  SRR4302542.3970841/94‑1 (MQ=60)

                                                                 ATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAG                              >  SRR4302542.1847504/1‑94 (MQ=60)

                                                                 ATTAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAG                              <  SRR4302542.3419100/94‑1 (MQ=60)

                                                                   TAATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGT                            <  SRR4302542.215275/94‑1 (MQ=60)

                                                                    AATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTC                           <  SRR4302542.452433/94‑1 (MQ=60)

                                                                     ATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCA                          <  SRR4302542.5800156/94‑1 (MQ=60)

                                                                     ATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCA                          <  SRR4302542.3920985/94‑1 (MQ=60)

                                                                     ATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCA                          <  SRR4302542.2964930/94‑1 (MQ=60)

                                                                     ATTGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCA                          >  SRR4302542.6167269/1‑94 (MQ=60)

                                                                       TGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACC                        <  SRR4302542.3672660/94‑1 (MQ=60)

                                                                       TGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACC                        <  SRR4302542.2298994/94‑1 (MQ=60)

                                                                       TGACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACC                        <  SRR4302542.573168/94‑1 (MQ=60)

                                                                        GACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCG                       <  SRR4302542.4946374/94‑1 (MQ=60)

                                                                        GACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCG                       <  SRR4302542.282850/94‑1 (MQ=60)

                                                                        GACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCG                       <  SRR4302542.6877099/94‑1 (MQ=60)

                                                                        GACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCG                       <  SRR4302542.5296359/94‑1 (MQ=60)

                                                                        GACTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCG                       <  SRR4302542.1194362/94‑1 (MQ=60)

                                                                          CTCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAG                     <  SRR4302542.318277/94‑1 (MQ=60)

                                                                           TCACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGT                    <  SRR4302542.210083/94‑1 (MQ=60)

                                                                             ACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTG                  <  SRR4302542.4651490/94‑1 (MQ=60)

                                                                             ACCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTG                  <  SRR4302542.3659040/94‑1 (MQ=60)

                                                                              CCGTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGT                 <  SRR4302542.7520676/94‑1 (MQ=60)

                                                                               CGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTC                >  SRR4302542.2715643/1‑94 (MQ=60)

                                                                                GTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCA               >  SRR4302542.7171942/1‑94 (MQ=60)

                                                                                GTGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCA               >  SRR4302542.4461931/1‑94 (MQ=60)

                                                                                 TGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCAT              <  SRR4302542.2739382/94‑1 (MQ=60)

                                                                                 TGGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCAT              <  SRR4302542.6756823/94‑1 (MQ=60)

                                                                                  GGTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATA             >  SRR4302542.3971209/1‑94 (MQ=60)

                                                                                   GTCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAG            <  SRR4302542.4476485/94‑1 (MQ=60)

                                                                                    TCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGG           <  SRR4302542.1536360/94‑1 (MQ=60)

                                                                                    TCAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGG           <  SRR4302542.3857731/94‑1 (MQ=60)

                                                                                     CAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGA          >  SRR4302542.4999370/1‑94 (MQ=60)

                                                                                     CAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGA          >  SRR4302542.4406005/1‑94 (MQ=60)

                                                                                     CAGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGA          <  SRR4302542.4439273/94‑1 (MQ=60)

                                                                                      AGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGAG         >  SRR4302542.5404993/1‑94 (MQ=60)

                                                                                      AGCTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGAG         <  SRR4302542.870197/94‑1 (MQ=60)

                                                                                        CTGCGCAGAACACTATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCTACATAGGTCACCGAGTTGTCATAGGAGTT       <  SRR4302542.63276/94‑1 (MQ=60)

                                                                                        CTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGAGTT       <  SRR4302542.5609800/94‑1 (MQ=60)

                                                                                        CTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGAGTT       <  SRR4302542.5728809/94‑1 (MQ=60)

                                                                                        CTGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGAGTT       <  SRR4302542.6436225/94‑1 (MQ=60)

                                                                                         TGCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGAGTTG      >  SRR4302542.897383/1‑94 (MQ=60)

                                                                                          GCGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGAGTTGA     <  SRR4302542.2009578/94‑1 (MQ=60)

                                                                                           CGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGAGTTGAT    >  SRR4302542.1600062/1‑94 (MQ=60)

                                                                                           CGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGAGTTGAT    >  SRR4302542.5878346/1‑94 (MQ=60)

                                                                                           CGCAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGAGTTGAT    <  SRR4302542.6346947/94‑1 (MQ=60)

                                                                                            GTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGAGTTGATC   <  SRR4302542.5242139/94‑1 (MQ=60)

                                                                                             CAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGAGTTGATCA  <  SRR4302542.4157744/94‑1 (MQ=60)

                                                                                             CAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGAGTTGATCA  <  SRR4302542.3822985/94‑1 (MQ=60)

ATCGGTACGCGGAACTGCTCCGGCGGTGCCAGTTCACGCGGCGTGCCGTGCAGGTGCTCGCGTTCATTAATTGACTCACCGTGGTCAGCTGCGTAGAACACAATCGCTTTCTTATCGCGAACCTGATCAATCACGCTGGAGATAAAGTGATCCACATAGGTCACCGAGTTGTCATAGGAGTTGATCA  >  NC_000913/3706630‑3706816

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`