Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,722,055 A→G M298T (ATG→ACG)  glyQ ← glycine tRNA synthetase alpha subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,722,0550AG86.7% 809.4 / 109.2 331M298T (ATG→ACG) glyQglycine tRNA synthetase alpha subunit
Reads supporting (aligned to +/- strand):  ref base A (23/21);  new base G (158/129);  total (181/150)
Fisher's exact test for biased strand distribution p-value = 7.47e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.93e-01

Only 100 of 336 total aligned reads displayed.

CGCAGTGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTGACGCTCG  >  NC_000913/3721965‑3722147
                                                                                          |                                                                                            
cgcAGTGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTc                                                                                            <  2:3096104/93‑1 (MQ=255)
cgcAGTGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATc                                                                                            <  2:4558727/93‑1 (MQ=255)
 gcAGTGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGGCATAGCCGCCTCTTACTTATCTTTGTTGCACGTCg                                                                                           <  1:2850419/93‑1 (MQ=255)
 gcAGTGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCg                                                                                           <  1:5930128/93‑1 (MQ=255)
   aGTGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCggg                                                                                         >  1:5722117/1‑93 (MQ=255)
    gTGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGa                                                                                        >  2:1645004/1‑93 (MQ=255)
     tGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGaa                                                                                       <  1:1283095/93‑1 (MQ=255)
     tGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGaa                                                                                       >  2:4918692/1‑93 (MQ=255)
       cTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGc                                                                                     <  2:6010931/93‑1 (MQ=255)
       cTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGc                                                                                     <  1:6837798/93‑1 (MQ=255)
       cTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGc                                                                                     <  1:7523776/93‑1 (MQ=255)
       cTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGc                                                                                     <  2:3812656/93‑1 (MQ=255)
       cTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGc                                                                                     <  1:2708645/93‑1 (MQ=255)
       cTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGc                                                                                     <  1:1353436/93‑1 (MQ=255)
         tttGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCg                                                                                   <  1:6147790/93‑1 (MQ=255)
          ttGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGa                                                                                  <  1:5655872/93‑1 (MQ=255)
          ttGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGa                                                                                  <  1:1666020/93‑1 (MQ=255)
          ttGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGa                                                                                  <  2:1763256/93‑1 (MQ=255)
           tggtggCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAg                                                                                 <  1:3290308/93‑1 (MQ=255)
           tggtggCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAg                                                                                 <  2:1227406/93‑1 (MQ=255)
            ggtggCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAgg                                                                                <  1:2324424/93‑1 (MQ=255)
              tggCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGc                                                                              >  2:4986452/1‑93 (MQ=255)
              tggCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGc                                                                              >  1:7328367/1‑93 (MQ=255)
               ggCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCt                                                                             >  2:3717561/1‑93 (MQ=255)
               ggCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCt                                                                             <  2:4427571/93‑1 (MQ=255)
               ggCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCt                                                                             >  1:6082619/1‑93 (MQ=255)
                gCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCtt                                                                            <  2:2335590/93‑1 (MQ=255)
                gCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCtt                                                                            <  1:4286166/93‑1 (MQ=255)
                  aGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCTTCa                                                                          <  1:4911212/93‑1 (MQ=255)
                    ctctTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACg                                                                        <  1:5005249/93‑1 (MQ=255)
                    ctctTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACg                                                                        <  1:256520/93‑1 (MQ=255)
                     tctTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACgg                                                                       >  2:5502641/1‑93 (MQ=255)
                     tctTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACgg                                                                       >  1:6755764/1‑93 (MQ=255)
                      ctTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACggg                                                                      >  1:2124447/1‑93 (MQ=255)
                      ctTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACggg                                                                      >  1:6361459/1‑93 (MQ=255)
                        tCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGaa                                                                    >  1:1055878/1‑93 (MQ=255)
                         cAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAg                                                                   <  1:3761589/93‑1 (MQ=255)
                         cAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAg                                                                   >  1:4614661/1‑93 (MQ=255)
                           gTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCg                                                                 >  2:7058379/1‑93 (MQ=255)
                            tGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCgt                                                                <  2:5247384/93‑1 (MQ=255)
                             gCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCgta                                                               <  1:6623444/93‑1 (MQ=255)
                              ccGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCTTCACGGGAAGCgtag                                                              <  1:1532309/93‑1 (MQ=255)
                               cGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCgtagt                                                             >  1:3095118/1‑93 (MQ=255)
                                gATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCgtagta                                                            <  2:1300539/93‑1 (MQ=255)
                                gATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCgtagta                                                            <  2:267870/93‑1 (MQ=255)
                                  tttCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATg                                                          >  1:7034226/1‑93 (MQ=255)
                                  tttCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATg                                                          >  1:3945533/1‑93 (MQ=255)
                                  tttCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATg                                                          >  1:5272683/1‑93 (MQ=255)
                                    tCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCt                                                        >  1:4721276/1‑93 (MQ=255)
                                      caccaGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTc                                                      <  2:2563249/93‑1 (MQ=255)
                                         caGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGc                                                   >  1:3828610/1‑93 (MQ=255)
                                           gAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCa                                                 >  2:5866286/1‑93 (MQ=255)
                                            aaaaGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCAc                                                <  1:954131/93‑1 (MQ=255)
                                            aaaaGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCAc                                                >  1:5113931/1‑93 (MQ=255)
                                             aaaGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACt                                               >  2:845630/1‑93 (MQ=255)
                                               aGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGc                                             <  1:892223/93‑1 (MQ=255)
                                               aGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGc                                             >  1:4410206/1‑93 (MQ=255)
                                               aGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGc                                             <  2:6595308/93‑1 (MQ=255)
                                                gTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCt                                            >  2:3577937/1‑93 (MQ=255)
                                                gTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCt                                            >  1:2951235/1‑93 (MQ=255)
                                                   ttCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTg                                         <  2:5713160/93‑1 (MQ=255)
                                                   ttCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTg                                         >  2:4316716/1‑93 (MQ=255)
                                                   ttCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTg                                         <  2:6296065/93‑1 (MQ=255)
                                                     ctcAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGt                                       >  2:4164394/1‑93 (MQ=255)
                                                      tcAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTc                                      <  2:1136383/93‑1 (MQ=255)
                                                      tcAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTc                                      >  1:811920/1‑93 (MQ=255)
                                                      tcAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTc                                      >  2:277598/1‑93 (MQ=255)
                                                       cAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCa                                     >  2:6637716/1‑93 (MQ=255)
                                                       cAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCa                                     >  1:2151022/1‑93 (MQ=255)
                                                         gACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAgg                                   <  1:1431731/93‑1 (MQ=255)
                                                          aCATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAggg                                  >  2:3441191/1‑93 (MQ=255)
                                                           cATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGt                                 >  1:3629052/1‑93 (MQ=255)
                                                           cATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGt                                 <  2:2818152/93‑1 (MQ=255)
                                                            aTAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTg                                >  1:4078885/1‑93 (MQ=255)
                                                             tAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGc                               <  2:532817/93‑1 (MQ=255)
                                                                   ccTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATgc                         >  1:3921730/1‑93 (MQ=255)
                                                                    ctctTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATgcg                        >  1:4839219/1‑93 (MQ=255)
                                                                    ctctTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTCTGGTCAGGGTGCGAATgcg                        >  1:3465207/1‑93 (MQ=255)
                                                                      cttacttaTCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCa                      <  2:3872028/93‑1 (MQ=255)
                                                                      cttacttaTCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCa                      >  2:3917157/1‑93 (MQ=255)
                                                                      cttac‑tatCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAg                     >  1:6386679/1‑93 (MQ=255)
                                                                       ttacttaTCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAg                     >  1:1910564/1‑93 (MQ=255)
                                                                          cttaTCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAAt                  >  2:5142425/1‑93 (MQ=255)
                                                                           ttaTCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATg                 <  1:1016812/93‑1 (MQ=255)
                                                                           ttaTCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATg                 >  2:6954292/1‑93 (MQ=255)
                                                                            taTCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGt                >  1:4468426/1‑93 (MQ=255)
                                                                            taTCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGt                >  2:7181162/1‑93 (MQ=255)
                                                                              tCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAg              <  2:1936971/93‑1 (MQ=255)
                                                                               cTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAgc             <  2:7370756/93‑1 (MQ=255)
                                                                                tttGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAgcg            >  2:5446866/1‑93 (MQ=255)
                                                                                tttGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAgcg            >  1:1764250/1‑93 (MQ=255)
                                                                                tttGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAgcg            >  2:2865650/1‑93 (MQ=255)
                                                                                 ttgttgCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAgcgc           >  1:6290083/1‑93 (MQ=255)
                                                                                 ttgttgCACATCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAgcgc           >  2:6229290/1‑93 (MQ=255)
                                                                                    ttgCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTGa        >  2:6363902/1‑93 (MQ=255)
                                                                                    ttgCACATCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTGa        >  1:5526296/1‑93 (MQ=255)
                                                                                     tgCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTGAc       <  1:4955895/93‑1 (MQ=255)
                                                                                     tgCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTGAc       <  2:4766511/93‑1 (MQ=255)
                                                                                      gCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTGACg      >  2:3185053/1‑93 (MQ=255)
                                                                                         caTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTGACGCTc   >  2:6544987/1‑93 (MQ=255)
                                                                                          |                                                                                            
CGCAGTGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTGACGCTCG  >  NC_000913/3721965‑3722147

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CTGCGCAGTGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTGACGCTCG  >  NC_000913/3721962‑3722147
                                                                                             |                                                                                            
CTGCGCAGTGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACG                                                                                              >  SRR4302542.7030165/1‑94 (MQ=60)
CTGCGCAGTGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACG                                                                                              >  SRR4302542.69987/1‑94 (MQ=60)
CTGCGCAGTGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACG                                                                                              >  SRR4302542.4161310/1‑94 (MQ=60)
  GCGCAGTGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTC                                                                                            <  SRR4302542.1477244/94‑1 (MQ=60)
  GCGCAGTGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTC                                                                                            <  SRR4302542.5167308/94‑1 (MQ=60)
   CGCAGTGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCG                                                                                           >  SRR4302542.3415573/1‑94 (MQ=60)
   CGCAGTGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCG                                                                                           <  SRR4302542.1132514/94‑1 (MQ=60)
    GCAGTGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGGCATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGG                                                                                          <  SRR4302542.2877822/94‑1 (MQ=60)
    GCAGTGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGG                                                                                          <  SRR4302542.5987584/94‑1 (MQ=60)
     CAGTGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGG                                                                                         >  SRR4302542.6052917/1‑94 (MQ=60)
     CAGTGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGG                                                                                         >  SRR4302542.5777661/1‑94 (MQ=60)
      AGTGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGA                                                                                        >  SRR4302542.801588/1‑94 (MQ=60)
       GTGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAA                                                                                       >  SRR4302542.2656202/1‑94 (MQ=60)
        TGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAG                                                                                      <  SRR4302542.1294139/94‑1 (MQ=60)
          CTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCC                                                                                    <  SRR4302542.6904985/94‑1 (MQ=60)
          CTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCC                                                                                    <  SRR4302542.2734773/94‑1 (MQ=60)
          CTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCC                                                                                    <  SRR4302542.7597757/94‑1 (MQ=60)
          CTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCC                                                                                    <  SRR4302542.1365127/94‑1 (MQ=60)
            TTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGA                                                                                  <  SRR4302542.6207275/94‑1 (MQ=60)
             TTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAG                                                                                 <  SRR4302542.935668/94‑1 (MQ=60)
             TTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAG                                                                                 <  SRR4302542.2806945/94‑1 (MQ=60)
             TTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAG                                                                                 <  SRR4302542.1680407/94‑1 (MQ=60)
             TTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAG                                                                                 <  SRR4302542.7391981/94‑1 (MQ=60)
             TTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAG                                                                                 <  SRR4302542.5710816/94‑1 (MQ=60)
              TGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGG                                                                                <  SRR4302542.7101756/94‑1 (MQ=60)
              TGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGG                                                                                <  SRR4302542.3321371/94‑1 (MQ=60)
               GGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGG                                                                               <  SRR4302542.2146306/94‑1 (MQ=60)
               GGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGG                                                                               <  SRR4302542.2344351/94‑1 (MQ=60)
                GTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGC                                                                              >  SRR4302542.7400161/1‑94 (MQ=60)
                 TGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCT                                                                             >  SRR4302542.6141515/1‑94 (MQ=60)
                  GGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTT                                                                            >  SRR4302542.3782089/1‑94 (MQ=60)
                   GCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCTTC                                                                           <  SRR4302542.4328319/94‑1 (MQ=60)
                    CAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCA                                                                          >  SRR4302542.1900342/1‑94 (MQ=60)
                    CAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCA                                                                          >  SRR4302542.5434479/1‑94 (MQ=60)
                     AGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTacc                                                                         >  SRR4302542.6342058/1‑91 (MQ=60)
                     AGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCAC                                                                         <  SRR4302542.2238449/94‑1 (MQ=60)
                     AGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCAC                                                                         >  SRR4302542.3137947/1‑94 (MQ=60)
                     AGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCTTCAC                                                                         <  SRR4302542.4958981/94‑1 (MQ=60)
                      GCTCTTCAGTGCCGATTTCCCCCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACG                                                                        <  SRR4302542.6248473/94‑1 (MQ=60)
                      GCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACG                                                                        >  SRR4302542.5762089/1‑94 (MQ=60)
                       CTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGG                                                                       >  SRR4302542.4655690/1‑94 (MQ=60)
                       CTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGG                                                                       <  SRR4302542.5053860/94‑1 (MQ=60)
                       CTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGG                                                                       <  SRR4302542.258706/94‑1 (MQ=60)
                       CTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGG                                                                       >  SRR4302542.3012814/1‑94 (MQ=60)
                       CTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGG                                                                       >  SRR4302542.6822223/1‑94 (MQ=60)
                        TCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGG                                                                      >  SRR4302542.6424102/1‑94 (MQ=60)
                        TCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGG                                                                      >  SRR4302542.1629557/1‑94 (MQ=60)
                        TCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGG                                                                      >  SRR4302542.5061967/1‑94 (MQ=60)
                        TCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGG                                                                      >  SRR4302542.2142780/1‑94 (MQ=60)
                         CTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGA                                                                     >  SRR4302542.715754/1‑94 (MQ=60)
                         CTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGA                                                                     >  SRR4302542.3182427/1‑94 (MQ=60)
                         CTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGA                                                                     >  SRR4302542.1729080/1‑94 (MQ=60)
                         CTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGA                                                                     >  SRR4302542.5992998/1‑94 (MQ=60)
                          TTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAA                                                                    >  SRR4302542.1064951/1‑94 (MQ=60)
                          TTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAA                                                                    >  SRR4302542.6151665/1‑94 (MQ=60)
                           TCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAG                                                                   >  SRR4302542.4659747/1‑94 (MQ=60)
                            CAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGC                                                                  <  SRR4302542.3798802/94‑1 (MQ=60)
                            CAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGC                                                                  >  SRR4302542.3232380/1‑94 (MQ=60)
                             AGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCG                                                                 <  SRR4302542.889017/94‑1 (MQ=60)
                              GTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGT                                                                >  SRR4302542.4353870/1‑94 (MQ=60)
                              GTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGT                                                                >  SRR4302542.5077082/1‑94 (MQ=60)
                               TGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTA                                                               <  SRR4302542.6926065/94‑1 (MQ=60)
                                GCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAG                                                              <  SRR4302542.6688749/94‑1 (MQ=60)
                                GCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAG                                                              >  SRR4302542.244311/1‑94 (MQ=60)
                                GCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAG                                                              <  SRR4302542.6872584/94‑1 (MQ=60)
                                GCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAG                                                              <  SRR4302542.4971286/94‑1 (MQ=60)
                                GCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAG                                                              <  SRR4302542.875690/94‑1 (MQ=60)
                                GCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCTTCACGGGAAGCGTAG                                                              <  SRR4302542.2949098/94‑1 (MQ=60)
                                 CCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGT                                                             >  SRR4302542.3124549/1‑94 (MQ=60)
                                 CCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGT                                                             <  SRR4302542.3970285/94‑1 (MQ=60)
                                 CCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGT                                                             <  SRR4302542.1545541/94‑1 (MQ=60)
                                  CGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTA                                                            >  SRR4302542.1031931/1‑94 (MQ=60)
                                  CGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTA                                                            <  SRR4302542.3826864/94‑1 (MQ=60)
                                  CGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTA                                                            >  SRR4302542.166576/1‑94 (MQ=60)
                                   GATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTAT                                                           <  SRR4302542.1495654/94‑1 (MQ=60)
                                    ATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATG                                                          >  SRR4302542.7103334/1‑94 (MQ=60)
                                    ATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATG                                                          >  SRR4302542.3984496/1‑94 (MQ=60)
                                    ATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATG                                                          <  SRR4302542.6447048/94‑1 (MQ=60)
                                    ATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATG                                                          >  SRR4302542.5323919/1‑94 (MQ=60)
                                     TTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGC                                                         >  SRR4302542.2462189/1‑94 (MQ=60)
                                     TTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGC                                                         >  SRR4302542.6484359/1‑94 (MQ=60)
                                      TTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCT                                                        <  SRR4302542.4902732/94‑1 (MQ=60)
                                      TTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCT                                                        >  SRR4302542.4767296/1‑94 (MQ=60)
                                         CACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCT                                                     >  SRR4302542.6659825/1‑94 (MQ=60)
                                         CACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCT                                                     >  SRR4302542.7428824/1‑94 (MQ=60)
                                          ACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTG                                                    >  SRR4302542.907966/1‑94 (MQ=60)
                                          ACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTG                                                    >  SRR4302542.1396806/1‑94 (MQ=60)
                                           CCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGC                                                   >  SRR4302542.563197/1‑94 (MQ=60)
                                           CCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGC                                                   >  SRR4302542.3866481/1‑94 (MQ=60)
                                           CCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGC                                                   >  SRR4302542.900257/1‑94 (MQ=60)
                                           CCAGAAAAGTTTTCTCAGACATAGCCGCCTCTAATTTATCTTGGTTGCCCGCCGGGAGGCTGAGGCCTTCACGGGAAGCGTAGAATGCTTCTCC                                                   >  SRR4302542.413044/1‑94 (MQ=38)
                                             AGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCA                                                 >  SRR4302542.2117302/1‑94 (MQ=60)
                                             AGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCA                                                 >  SRR4302542.5625231/1‑94 (MQ=60)
                                             AGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCA                                                 >  SRR4302542.4887278/1‑94 (MQ=60)
                                              GAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCAC                                                >  SRR4302542.7567665/1‑94 (MQ=60)
                                              GAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCAC                                                >  SRR4302542.5163601/1‑94 (MQ=60)
                                               AAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACT                                               <  SRR4302542.962322/94‑1 (MQ=60)
                                                 AAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGC                                             >  SRR4302542.4453515/1‑94 (MQ=60)
                                                  AGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCT                                            >  SRR4302542.434742/1‑94 (MQ=60)
                                                  AGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCT                                            <  SRR4302542.899948/94‑1 (MQ=60)
                                                  AGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCT                                            <  SRR4302542.5323736/94‑1 (MQ=60)
                                                  AGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCT                                            >  SRR4302542.2979485/1‑94 (MQ=60)
                                                     TTTCTCAGACATAGCCGCCTCTTTCTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTG                                         <  SRR4302542.4589624/94‑1 (MQ=60)
                                                     TTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTG                                         <  SRR4302542.3870357/94‑1 (MQ=60)
                                                      TTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGG                                        >  SRR4302542.5881115/1‑94 (MQ=60)
                                                      TTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGCGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGG                                        <  SRR4302542.7589647/94‑1 (MQ=60)
                                                       TCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGT                                       <  SRR4302542.5864359/94‑1 (MQ=60)
                                                        CTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTC                                      >  SRR4302542.818947/1‑94 (MQ=60)
                                                        CTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTC                                      >  SRR4302542.4930347/1‑94 (MQ=60)
                                                         TCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCA                                     >  SRR4302542.2169567/1‑94 (MQ=60)
                                                         TCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCA                                     <  SRR4302542.6753300/94‑1 (MQ=60)
                                                         TCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCA                                     <  SRR4302542.4073128/94‑1 (MQ=60)
                                                          CAGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAG                                    >  SRR4302542.3514322/1‑94 (MQ=60)
                                                           AGACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGG                                   >  SRR4302542.4264200/1‑94 (MQ=60)
                                                            GACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGG                                  >  SRR4302542.4453872/1‑94 (MQ=60)
                                                            GACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGG                                  >  SRR4302542.3113730/1‑94 (MQ=60)
                                                            GACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGG                                  <  SRR4302542.1538796/94‑1 (MQ=60)
                                                            GACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGG                                  <  SRR4302542.1444107/94‑1 (MQ=60)
                                                            GACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGG                                  <  SRR4302542.1412295/94‑1 (MQ=60)
                                                             ACATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGT                                 >  SRR4302542.3662864/1‑94 (MQ=60)
                                                              CATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTG                                <  SRR4302542.4466630/94‑1 (MQ=60)
                                                              CATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTG                                <  SRR4302542.5696752/94‑1 (MQ=60)
                                                              CATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTG                                >  SRR4302542.6354297/1‑94 (MQ=60)
                                                              CATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTG                                >  SRR4302542.4119084/1‑94 (MQ=60)
                                                               ATAGCCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGC                               >  SRR4302542.234490/1‑94 (MQ=60)
                                                                   CCGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAAT                           <  SRR4302542.3978573/94‑1 (MQ=60)
                                                                    CGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATG                          <  SRR4302542.3910915/94‑1 (MQ=60)
                                                                    CGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATG                          <  SRR4302542.395710/94‑1 (MQ=60)
                                                                    CGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATG                          >  SRR4302542.1573028/1‑94 (MQ=60)
                                                                    CGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATG                          >  SRR4302542.6466888/1‑94 (MQ=60)
                                                                    CGCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATG                          >  SRR4302542.1006811/1‑94 (MQ=60)
                                                                    CGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATG                          <  SRR4302542.5751107/94‑1 (MQ=60)
                                                                     GCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGC                         >  SRR4302542.6358457/1‑94 (MQ=60)
                                                                     GCCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGC                         >  SRR4302542.3960429/1‑94 (MQ=60)
                                                                      CCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCG                        >  SRR4302542.4886357/1‑94 (MQ=60)
                                                                      CCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTCTGGTCAGGGTGCGAATGCG                        >  SRR4302542.3497662/1‑94 (MQ=60)
                                                                      CCTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGCAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCG                        <  SRR4302542.6274488/94‑1 (MQ=60)
                                                                      CCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCG                        >  SRR4302542.4582548/1‑94 (MQ=60)
                                                                       CTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGC                       >  SRR4302542.5788659/1‑94 (MQ=60)
                                                                       CTCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGC                       >  SRR4302542.2799957/1‑94 (MQ=60)
                                                                        TCTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCA                      >  SRR4302542.1202061/1‑94 (MQ=60)
                                                                        TCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCA                      >  SRR4302542.4733936/1‑94 (MQ=60)
                                                                        TCTTAC‑TATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAG                     >  SRR4302542.6449599/1‑94 (MQ=60)
                                                                         CTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAG                     <  SRR4302542.3734563/94‑1 (MQ=60)
                                                                         CTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAG                     >  SRR4302542.78226/1‑94 (MQ=60)
                                                                         CTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAG                     >  SRR4302542.1927081/1‑94 (MQ=60)
                                                                         CTTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAG                     >  SRR4302542.3477120/1‑94 (MQ=60)
                                                                          TTACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGA                    >  SRR4302542.421545/1‑94 (MQ=60)
                                                                           TACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAA                   >  SRR4302542.4831889/1‑94 (MQ=60)
                                                                            ACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAAT                  <  SRR4302542.266242/94‑1 (MQ=60)
                                                                            ACTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAAT                  >  SRR4302542.5023007/1‑94 (MQ=60)
                                                                             CTTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATG                 <  SRR4302542.4704459/94‑1 (MQ=60)
                                                                              TTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGT                <  SRR4302542.1025570/94‑1 (MQ=60)
                                                                              TTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGT                >  SRR4302542.1944019/1‑94 (MQ=60)
                                                                              TTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGT                >  SRR4302542.3565314/1‑94 (MQ=60)
                                                                              TTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGT                <  SRR4302542.5271916/94‑1 (MQ=60)
                                                                              TTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGT                <  SRR4302542.3807329/94‑1 (MQ=60)
                                                                              TTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGT                <  SRR4302542.4798070/94‑1 (MQ=60)
                                                                              TTATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGT                >  SRR4302542.4512255/1‑94 (MQ=60)
                                                                               TATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTA               >  SRR4302542.2820840/1‑94 (MQ=60)
                                                                               TATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTA               <  SRR4302542.1361253/94‑1 (MQ=60)
                                                                               TATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTA               <  SRR4302542.4995734/94‑1 (MQ=60)
                                                                               TATCTTTGATGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTA               >  SRR4302542.5561168/1‑94 (MQ=60)
                                                                                ATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAG              <  SRR4302542.5049551/94‑1 (MQ=60)
                                                                                ATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAG              <  SRR4302542.2315944/94‑1 (MQ=60)
                                                                                ATCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAG              <  SRR4302542.2116808/94‑1 (MQ=60)
                                                                                 TCTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGC             <  SRR4302542.6928795/94‑1 (MQ=60)
                                                                                  CTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCG            <  SRR4302542.1031232/94‑1 (MQ=60)
                                                                                  CTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCG            >  SRR4302542.2147271/1‑94 (MQ=60)
                                                                                  CTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCG            <  SRR4302542.2897331/94‑1 (MQ=60)
                                                                                  CTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCG            <  SRR4302542.1890733/94‑1 (MQ=60)
                                                                                  CTTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCG            >  SRR4302542.1779554/1‑94 (MQ=60)
                                                                                  CTTTGTTGCACATCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCG            >  SRR4302542.1362198/1‑94 (MQ=60)
                                                                                   TTTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGC           >  SRR4302542.6352058/1‑94 (MQ=60)
                                                                                    TTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCT          <  SRR4302542.5096317/94‑1 (MQ=60)
                                                                                    TTGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCT          <  SRR4302542.1325883/94‑1 (MQ=60)
                                                                                     TGTTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTG         >  SRR4302542.6427219/1‑94 (MQ=60)
                                                                                      GTTGCACATCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTGA        >  SRR4302542.5580009/1‑94 (MQ=60)
                                                                                       TTGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTGAC       <  SRR4302542.6736743/94‑1 (MQ=60)
                                                                                       TTGCACATCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTGAC       <  SRR4302542.168071/94‑1 (MQ=60)
                                                                                        TGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTGACG      <  SRR4302542.6869886/94‑1 (MQ=60)
                                                                                        TGCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTGACG      <  SRR4302542.5004043/94‑1 (MQ=60)
                                                                                        TGCACATCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTGACG      >  SRR4302542.3749961/1‑94 (MQ=60)
                                                                                         GCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTGACGC     >  SRR4302542.6175224/1‑94 (MQ=60)
                                                                                         GCACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTGACGC     <  SRR4302542.4002803/94‑1 (MQ=60)
                                                                                          CACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTGACGCT    >  SRR4302542.2938738/1‑94 (MQ=60)
                                                                                           ACGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTGACGCTC   >  SRR4302542.4932788/1‑94 (MQ=60)
                                                                                            CGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTNANNCNCG  >  SRR4302542.7287428/1‑94 (MQ=60)
                                                                                            CGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTGACGCTCG  >  SRR4302542.7305586/1‑94 (MQ=60)
                                                                                            CGTCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTGACGCTCG  >  SRR4302542.5900189/1‑94 (MQ=60)
                                                                                             |                                                                                            
CTGCGCAGTGCTTTTGGTGGCAGCTCTTCAGTGCCGATTTCCACCAGAAAAGTTTTCTCAGACATAGCCGCCTCTTACTTATCTTTGTTGCACATCGGGAAGCCGAGGGCTTCACGGGAAGCGTAGTATGCTTCTGCCACTGCTTTGGTCAGGGTGCGAATGCGCAGAATGTAGCGCTGACGCTCG  >  NC_000913/3721962‑3722147

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑