Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,738,723 A→G intergenic (+136/+15) avtA → / ← yiaI alanine‑alpha‑ketoisovalerate transaminase/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,738,7230AG83.2% 661.4 / 119.2 303intergenic (+136/+15)avtA/yiaIalanine‑alpha‑ketoisovalerate transaminase/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (24/27);  new base G (143/109);  total (167/136)
Fisher's exact test for biased strand distribution p-value = 2.20e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 311 total aligned reads displayed.

GCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGCA  >  NC_000913/3738631‑3738812
                                                                                            |                                                                                         
  aaTATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACg                                                                                         >  1:1090445/1‑93 (MQ=255)
  aaTATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACg                                                                                         >  2:6429554/1‑93 (MQ=255)
   atatatTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAgcgc                                                                                        >  2:1983881/1‑93 (MQ=255)
   atatatTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAgcgc                                                                                        <  1:598042/93‑1 (MQ=255)
   atatatTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAgcgc                                                                                        >  2:3215817/1‑93 (MQ=255)
    tatatTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGcc                                                                                       >  1:2111702/1‑93 (MQ=255)
    tatatTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGcc                                                                                       >  1:285848/1‑93 (MQ=255)
      tatTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCgg                                                                                     >  2:2568359/1‑93 (MQ=255)
      tatTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCgg                                                                                     >  2:5420474/1‑93 (MQ=255)
        ttGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGaa                                                                                   >  2:2707337/1‑93 (MQ=255)
        ttGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGaa                                                                                   >  1:5727278/1‑93 (MQ=255)
               tGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGttt                                                                            <  1:134599/93‑1 (MQ=255)
                  aagaaTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCaa                                                                         <  2:4007018/93‑1 (MQ=255)
                   agaaTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCaaa                                                                        <  2:4394755/93‑1 (MQ=255)
                   agaaTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCaaa                                                                        <  2:5020382/93‑1 (MQ=255)
                    gaaTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAAc                                                                       <  2:4519422/93‑1 (MQ=255)
                     aaTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACa                                                                      <  1:2657974/93‑1 (MQ=255)
                     aaTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACa                                                                      <  1:694779/93‑1 (MQ=255)
                     aaTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACa                                                                      <  1:1017866/93‑1 (MQ=255)
                     aaTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGGTTCAAACa                                                                      <  1:5604132/93‑1 (MQ=255)
                      aTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAg                                                                     >  1:2368341/1‑93 (MQ=255)
                      aTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAg                                                                     >  2:5891299/1‑93 (MQ=255)
                      aTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAg                                                                     <  2:1011721/93‑1 (MQ=255)
                        ttGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGgc                                                                   <  1:6693748/93‑1 (MQ=255)
                        ttGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGgc                                                                   <  1:3333941/93‑1 (MQ=255)
                        ttGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGgc                                                                   <  1:6789355/93‑1 (MQ=255)
                         tGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGgct                                                                  <  1:4810834/93‑1 (MQ=255)
                           tAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGgctgc                                                                <  2:167455/93‑1 (MQ=255)
                           tAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGgctgc                                                                <  2:5799902/93‑1 (MQ=255)
                            aGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGgctgct                                                               >  2:3584885/1‑93 (MQ=255)
                            aGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGgctgct                                                               <  1:3722242/93‑1 (MQ=255)
                              gCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCtgctgc                                                             <  2:3931141/93‑1 (MQ=255)
                               ccGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGcc                                                            <  2:4838716/93‑1 (MQ=255)
                                cGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCg                                                           <  2:5604992/93‑1 (MQ=255)
                                 ggATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGt                                                          >  2:4577532/1‑93 (MQ=255)
                                  gATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTa                                                         <  2:535433/93‑1 (MQ=255)
                                  gATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTa                                                         <  2:704076/93‑1 (MQ=255)
                                  gATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTa                                                         >  1:5517386/1‑93 (MQ=255)
                                   aTAAGGCGTTTACGCCGCATCCGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAg                                                        >  1:5124562/1‑93 (MQ=255)
                                    tAAGGTGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGc                                                       <  1:4980222/93‑1 (MQ=255)
                                    tAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGc                                                       >  2:2327690/1‑93 (MQ=255)
                                    tAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGc                                                       <  1:1669472/93‑1 (MQ=255)
                                      aGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCg                                                     >  2:5392904/1‑93 (MQ=255)
                                       ggCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGa                                                    <  2:1737906/93‑1 (MQ=255)
                                       ggCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGa                                                    <  2:7122975/93‑1 (MQ=255)
                                       ggCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGa                                                    <  2:4779323/93‑1 (MQ=255)
                                       ggCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGa                                                    <  2:119990/93‑1 (MQ=255)
                                        gCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGTCGAt                                                   <  2:3069878/93‑1 (MQ=255)
                                        gCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGAt                                                   <  2:6843735/93‑1 (MQ=255)
                                        gCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGAt                                                   >  1:3918056/1‑93 (MQ=255)
                                          gTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGc                                                 <  2:6000212/93‑1 (MQ=255)
                                           tttACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGcc                                                <  1:5283700/93‑1 (MQ=255)
                                           tttACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGcc                                                >  1:3475352/1‑93 (MQ=255)
                                             tACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGc                                              >  1:272114/1‑93 (MQ=255)
                                             tACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGc                                              <  1:6192816/93‑1 (MQ=255)
                                                  cgcATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCAc                                         <  1:353857/93‑1 (MQ=255)
                                                   gcATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACt                                        >  2:911524/1‑93 (MQ=255)
                                                    cATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACtt                                       <  2:1377317/93‑1 (MQ=255)
                                                     aTCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACttt                                      >  1:2581719/1‑93 (MQ=255)
                                                      tCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTtc                                     <  2:3858005/93‑1 (MQ=255)
                                                      tCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTtc                                     >  2:383924/1‑93 (MQ=255)
                                                      tCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGCAGCCGATGCCGCTGCACTTtc                                     >  1:6389355/1‑93 (MQ=255)
                                                      tCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTtc                                     <  1:1997188/93‑1 (MQ=255)
                                                       cTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTtct                                    >  1:249187/1‑93 (MQ=255)
                                                        tGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTtctc                                   >  1:1901868/1‑93 (MQ=255)
                                                          gCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGa                                 <  1:6456581/93‑1 (MQ=255)
                                                             tAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACAt                              >  2:6730198/1‑93 (MQ=255)
                                                             tAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACAt                              >  1:1804367/1‑93 (MQ=255)
                                                             tAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACAt                              <  1:4249299/93‑1 (MQ=255)
                                                               aaCAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATcc                            >  2:214639/1‑93 (MQ=255)
                                                               aaCAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATcc                            >  2:1832686/1‑93 (MQ=255)
                                                               aaCAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATcc                            >  1:3824025/1‑93 (MQ=255)
                                                               aaCAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATcc                            <  1:7159540/93‑1 (MQ=255)
                                                                 cAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCAt                          >  2:2903863/1‑93 (MQ=255)
                                                                 cAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCAt                          <  2:4144337/93‑1 (MQ=255)
                                                                  aaaGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATg                         >  1:7398589/1‑93 (MQ=255)
                                                                  aaaGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATg                         <  2:115535/93‑1 (MQ=255)
                                                                   aaGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGc                        >  2:3435454/1‑93 (MQ=255)
                                                                    aGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCa                       <  1:3050724/93‑1 (MQ=255)
                                                                         aCTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCa                  >  1:1184139/1‑93 (MQ=255)
                                                                          cTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCaa                 >  2:3287287/1‑93 (MQ=255)
                                                                            gTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACg               >  1:1315425/1‑93 (MQ=255)
                                                                            gTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACg               >  2:6125871/1‑93 (MQ=255)
                                                                              tCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGcc             <  1:1258597/93‑1 (MQ=255)
                                                                                cGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCtt           >  1:4546483/1‑93 (MQ=255)
                                                                                cGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCtt           <  2:7490640/93‑1 (MQ=255)
                                                                                cGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCtt           <  1:7243069/93‑1 (MQ=255)
                                                                                 ggCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCttt          >  1:948426/1‑93 (MQ=255)
                                                                                 ggCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCttt          <  1:6347699/93‑1 (MQ=255)
                                                                                  gCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTg         <  1:6150847/93‑1 (MQ=255)
                                                                                   cGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGt        >  1:5482693/1‑93 (MQ=255)
                                                                                    gTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTc       >  1:3586669/1‑93 (MQ=255)
                                                                                    gTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTc       <  1:4072188/93‑1 (MQ=255)
                                                                                    gTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTc       >  1:4478006/1‑93 (MQ=255)
                                                                                     ttGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCg      >  2:7338583/1‑93 (MQ=255)
                                                                                     ttGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCg      <  1:1572692/93‑1 (MQ=255)
                                                                                      tGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCgg     <  2:4681340/93‑1 (MQ=255)
                                                                                      tGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCgg     <  1:7334571/93‑1 (MQ=255)
                                                                                       gagaAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCggg    <  2:113736/93‑1 (MQ=255)
                                                                                        agaAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGc   <  2:6651703/93‑1 (MQ=255)
                                                                                            |                                                                                         
GCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGCA  >  NC_000913/3738631‑3738812

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGCAGGCT  >  NC_000913/3738632‑3738816
                                                                                           |                                                                                             
CAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACG                                                                                             >  SRR4302542.1099790/1‑94 (MQ=60)
 AATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGC                                                                                            >  SRR4302542.2084569/1‑94 (MQ=60)
  ATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCC                                                                                           >  SRR4302542.1755660/1‑94 (MQ=60)
  ATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCC                                                                                           >  SRR4302542.2129929/1‑94 (MQ=60)
  ATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCC                                                                                           >  SRR4302542.288338/1‑94 (MQ=60)
  ATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCC                                                                                           <  SRR4302542.6830114/94‑1 (MQ=60)
  ATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCC                                                                                           <  SRR4302542.4291211/94‑1 (MQ=60)
  ATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCC                                                                                           <  SRR4302542.603197/94‑1 (MQ=60)
  ATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCC                                                                                           >  SRR4302542.5556662/1‑94 (MQ=60)
      ATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAA                                                                                       >  SRR4302542.4183321/1‑94 (MQ=60)
      ATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAA                                                                                       >  SRR4302542.5782859/1‑94 (MQ=60)
         GAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCCCTGTTCCGGCGTTGAGAAGCGCCGGAAAAC                                                                                    <  SRR4302542.7259617/94‑1 (MQ=60)
         GAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAAC                                                                                    >  SRR4302542.6387999/1‑94 (MQ=60)
         GAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAAC                                                                                    >  SRR4302542.6933114/1‑94 (MQ=60)
          AATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACG                                                                                   >  SRR4302542.1115343/1‑94 (MQ=60)
           ATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGT                                                                                  <  SRR4302542.493859/94‑1 (MQ=60)
           ATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGT                                                                                  >  SRR4302542.3980107/1‑94 (MQ=60)
            TTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTT                                                                                 <  SRR4302542.3133180/94‑1 (MQ=60)
              TGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTC                                                                               <  SRR4302542.1070819/94‑1 (MQ=60)
              TGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTC                                                                               <  SRR4302542.6621851/94‑1 (MQ=60)
              TGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTC                                                                               >  SRR4302542.7414726/1‑94 (MQ=60)
              TGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTC                                                                               <  SRR4302542.135685/94‑1 (MQ=60)
               GGAAGAATTTGTAGGCGGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCA                                                                              <  SRR4302542.1879574/94‑1 (MQ=60)
               GGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCA                                                                              <  SRR4302542.2850744/94‑1 (MQ=60)
               GGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCA                                                                              >  SRR4302542.1289218/1‑94 (MQ=60)
                GAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAA                                                                             <  SRR4302542.1089783/94‑1 (MQ=60)
                GAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAA                                                                             >  SRR4302542.4199335/1‑94 (MQ=60)
                GAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAA                                                                             >  SRR4302542.4682618/1‑94 (MQ=60)
                 AAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAA                                                                            >  SRR4302542.5468248/1‑94 (MQ=60)
                  AGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAAC                                                                           <  SRR4302542.2209079/94‑1 (MQ=60)
                   GAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACA                                                                          <  SRR4302542.1611198/94‑1 (MQ=60)
                   GAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACA                                                                          >  SRR4302542.4862601/1‑94 (MQ=60)
                    AATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAANGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTNCNNANAG                                                                         >  SRR4302542.6439491/1‑94 (MQ=60)
                    AATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAG                                                                         <  SRR4302542.1026632/94‑1 (MQ=60)
                    AATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAG                                                                         <  SRR4302542.2683631/94‑1 (MQ=60)
                    AATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAG                                                                         >  SRR4302542.2388974/1‑94 (MQ=60)
                    AATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAG                                                                         >  SRR4302542.7020833/1‑94 (MQ=60)
                    AATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAG                                                                         <  SRR4302542.700785/94‑1 (MQ=60)
                    AATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAG                                                                         <  SRR4302542.1191646/94‑1 (MQ=60)
                    AATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGGTTCAAACAG                                                                         <  SRR4302542.5658577/94‑1 (MQ=60)
                    AATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAG                                                                         <  SRR4302542.5104618/94‑1 (MQ=60)
                       TTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCT                                                                      <  SRR4302542.6759722/94‑1 (MQ=60)
                       TTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCT                                                                      <  SRR4302542.3365311/94‑1 (MQ=60)
                       TTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCT                                                                      <  SRR4302542.6856129/94‑1 (MQ=60)
                        TGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTG                                                                     <  SRR4302542.4857692/94‑1 (MQ=60)
                        TGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTG                                                                     >  SRR4302542.246726/1‑94 (MQ=60)
                        TGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTG                                                                     <  SRR4302542.192369/94‑1 (MQ=60)
                          TAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCT                                                                   <  SRR4302542.5238270/94‑1 (MQ=60)
                          TAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCT                                                                   >  SRR4302542.1688241/1‑94 (MQ=60)
                           AGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTG                                                                  >  SRR4302542.2882773/1‑94 (MQ=60)
                           AGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTG                                                                  <  SRR4302542.3759111/94‑1 (MQ=60)
                           AGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTG                                                                  >  SRR4302542.313945/1‑94 (MQ=60)
                               CGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGT                                                              >  SRR4302542.5769688/1‑94 (MQ=60)
                                GGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTA                                                             >  SRR4302542.3952583/1‑94 (MQ=60)
                                GGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTA                                                             >  SRR4302542.5571007/1‑94 (MQ=60)
                                 GATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAG                                                            <  SRR4302542.4505600/94‑1 (MQ=60)
                                 GATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAG                                                            >  SRR4302542.1333670/1‑94 (MQ=60)
                                 GATAAGGCGTTTACGCCGCATCCGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAG                                                            >  SRR4302542.5174323/1‑94 (MQ=60)
                                  ATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGC                                                           >  SRR4302542.6604425/1‑94 (MQ=60)
                                   TAAGGTGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCC                                                          <  SRR4302542.5028568/94‑1 (MQ=60)
                                   TAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCC                                                          <  SRR4302542.1683897/94‑1 (MQ=60)
                                    AAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCG                                                         >  SRR4302542.3013913/1‑94 (MQ=60)
                                      GGCGTTTACGCCGCTTCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGAT                                                       <  SRR4302542.6427936/94‑1 (MQ=60)
                                      GGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGAT                                                       <  SRR4302542.5126155/94‑1 (MQ=60)
                                      GGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGAT                                                       >  SRR4302542.3956715/1‑94 (MQ=60)
                                       GCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCCCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATG                                                      <  SRR4302542.4836038/94‑1 (MQ=60)
                                        CGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGC                                                     >  SRR4302542.755765/1‑94 (MQ=60)
                                         GTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCC                                                    >  SRR4302542.3507884/1‑94 (MQ=60)
                                         GTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCC                                                    >  SRR4302542.1500000/1‑94 (MQ=60)
                                          TTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCG                                                   <  SRR4302542.5335076/94‑1 (MQ=60)
                                           TTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGC                                                  >  SRR4302542.274447/1‑94 (MQ=60)
                                            TACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCT                                                 <  SRR4302542.6253094/94‑1 (MQ=60)
                                             ACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTG                                                <  SRR4302542.6386794/94‑1 (MQ=60)
                                              CGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTNN                                               >  SRR4302542.3063454/1‑94 (MQ=60)
                                              CGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGC                                               >  SRR4302542.2509945/1‑94 (MQ=60)
                                               GCCGCATCTGGCATAAACAAAGCGCACTGTTCGGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCA                                              >  SRR4302542.4532483/1‑94 (MQ=60)
                                               GCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCA                                              >  SRR4302542.6494185/1‑94 (MQ=60)
                                               GCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCA                                              >  SRR4302542.6234302/1‑94 (MQ=60)
                                               GCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCA                                              <  SRR4302542.976803/94‑1 (MQ=60)
                                                CCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCAC                                             >  SRR4302542.127632/1‑94 (MQ=60)
                                                 CGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACT                                            <  SRR4302542.356945/94‑1 (MQ=60)
                                                 CGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACT                                            >  SRR4302542.2699311/1‑94 (MQ=60)
                                                 CGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACT                                            >  SRR4302542.4311619/1‑94 (MQ=60)
                                                  GCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTT                                           >  SRR4302542.7000500/1‑94 (MQ=60)
                                                   CATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTT                                          <  SRR4302542.200108/94‑1 (MQ=60)
                                                   CATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTT                                          >  SRR4302542.1639049/1‑94 (MQ=60)
                                                   CATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTT                                          >  SRR4302542.7315885/1‑94 (MQ=60)
                                                   CATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTT                                          >  SRR4302542.2606741/1‑94 (MQ=60)
                                                    ATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGCAGCCGATGCCGCTGCACTTTC                                         >  SRR4302542.6452300/1‑94 (MQ=60)
                                                    ATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGCAGCCGATGCCGCTGCACTTTA                                         >  SRR4302542.3610250/1‑94 (MQ=60)
                                                    ATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTC                                         <  SRR4302542.2708490/94‑1 (MQ=60)
                                                     TCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCT                                        <  SRR4302542.772428/94‑1 (MQ=60)
                                                     TCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCT                                        <  SRR4302542.7361399/94‑1 (MQ=60)
                                                     TCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCT                                        <  SRR4302542.2014419/94‑1 (MQ=60)
                                                     TCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCT                                        >  SRR4302542.251315/1‑94 (MQ=60)
                                                      CTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTC                                       >  SRR4302542.1918314/1‑94 (MQ=60)
                                                         GCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGAC                                    <  SRR4302542.6520154/94‑1 (MQ=60)
                                                         GCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGAC                                    >  SRR4302542.5217289/1‑94 (MQ=60)
                                                         GCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGAC                                    <  SRR4302542.3884710/94‑1 (MQ=60)
                                                          CATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACA                                   >  SRR4302542.1351286/1‑94 (MQ=60)
                                                          CATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACA                                   <  SRR4302542.3306204/94‑1 (MQ=60)
                                                           ATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACAT                                  >  SRR4302542.584368/1‑94 (MQ=60)
                                                           ATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACAT                                  >  SRR4302542.39688/1‑94 (MQ=60)
                                                           ATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACAT                                  >  SRR4302542.3679579/1‑94 (MQ=60)
                                                           ATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACAT                                  >  SRR4302542.1820005/1‑94 (MQ=60)
                                                           ATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACAT                                  >  SRR4302542.3529254/1‑94 (MQ=60)
                                                            TAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATC                                 <  SRR4302542.4291163/94‑1 (MQ=60)
                                                             AAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCC                                >  SRR4302542.3861850/1‑94 (MQ=60)
                                                             AAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCC                                >  SRR4302542.2541049/1‑94 (MQ=60)
                                                             AAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCC                                >  SRR4302542.5599966/1‑94 (MQ=60)
                                                              AACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCA                               <  SRR4302542.7229771/94‑1 (MQ=60)
                                                               ACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCAT                              <  SRR4302542.7245205/94‑1 (MQ=60)
                                                               ACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCAT                              <  SRR4302542.5564356/94‑1 (MQ=60)
                                                                CAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATG                             >  SRR4302542.1267639/1‑94 (MQ=60)
                                                                CAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATG                             <  SRR4302542.5742992/94‑1 (MQ=60)
                                                                CAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATG                             <  SRR4302542.3843177/94‑1 (MQ=60)
                                                                CAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATG                             >  SRR4302542.7470995/1‑94 (MQ=60)
                                                                  AAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCA                           >  SRR4302542.5361902/1‑94 (MQ=60)
                                                                  AAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCA                           <  SRR4302542.6088196/94‑1 (MQ=60)
                                                                   AGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCAC                          <  SRR4302542.2625403/94‑1 (MQ=60)
                                                                   AGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCAC                          <  SRR4302542.2007273/94‑1 (MQ=60)
                                                                   AGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCAC                          <  SRR4302542.7428831/94‑1 (MQ=60)
                                                                   AGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCAC                          <  SRR4302542.3079844/94‑1 (MQ=60)
                                                                    GCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACT                         <  SRR4302542.6067587/94‑1 (MQ=60)
                                                                       CACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCA                      >  SRR4302542.1194356/1‑94 (MQ=60)
                                                                       CACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCA                      >  SRR4302542.2610791/1‑94 (MQ=60)
                                                                         CTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAAC                    >  SRR4302542.1574082/1‑94 (MQ=60)
                                                                         CTGTTCCGGCGTTGAGAAGCGCCGAAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAAC                    <  SRR4302542.4565736/94‑1 (MQ=60)
                                                                          TGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACG                   >  SRR4302542.1326763/1‑94 (MQ=60)
                                                                          TGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACG                   <  SRR4302542.1824352/94‑1 (MQ=60)
                                                                           GTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGC                  >  SRR4302542.6482213/1‑94 (MQ=60)
                                                                             TCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCT                <  SRR4302542.1269419/94‑1 (MQ=60)
                                                                              CCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTT               >  SRR4302542.4590986/1‑94 (MQ=60)
                                                                              CCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTT               <  SRR4302542.5923479/94‑1 (MQ=60)
                                                                               CGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTT              >  SRR4302542.956579/1‑94 (MQ=60)
                                                                               CGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTT              >  SRR4302542.573911/1‑94 (MQ=60)
                                                                               CGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTT              <  SRR4302542.7314100/94‑1 (MQ=60)
                                                                               CGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTT              >  SRR4302542.7085143/1‑94 (MQ=60)
                                                                                GGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTG             <  SRR4302542.620695/94‑1 (MQ=60)
                                                                                GGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTG             <  SRR4302542.6410241/94‑1 (MQ=60)
                                                                                 gggtgGAGAAGCGCCGGAAAACTTTTCAAACGGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGT            <  SRR4302542.6341715/89‑1 (MQ=60)
                                                                                 GCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGT            <  SRR4302542.6210398/94‑1 (MQ=60)
                                                                                 GCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGT            >  SRR4302542.5535950/1‑94 (MQ=60)
                                                                                  CGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTC           <  SRR4302542.2524843/94‑1 (MQ=60)
                                                                                  CGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTC           >  SRR4302542.3620124/1‑94 (MQ=60)
                                                                                  CGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTC           >  SRR4302542.2202770/1‑94 (MQ=60)
                                                                                  CGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTC           <  SRR4302542.3475100/94‑1 (MQ=60)
                                                                                  CGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTC           >  SRR4302542.4521966/1‑94 (MQ=60)
                                                                                   GTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCG          >  SRR4302542.6872817/1‑94 (MQ=60)
                                                                                   GTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCG          <  SRR4302542.4112340/94‑1 (MQ=60)
                                                                                   GTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCG          >  SRR4302542.3588855/1‑94 (MQ=60)
                                                                                   GTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCG          >  SRR4302542.3752481/1‑94 (MQ=60)
                                                                                    TTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGG         <  SRR4302542.1586273/94‑1 (MQ=60)
                                                                                    TTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGG         <  SRR4302542.3383555/94‑1 (MQ=60)
                                                                                    TTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGG         <  SRR4302542.6827913/94‑1 (MQ=60)
                                                                                    TTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGG         <  SRR4302542.3567946/94‑1 (MQ=60)
                                                                                    TGGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGG         <  SRR4302542.120493/94‑1 (MQ=60)
                                                                                     TGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGG        <  SRR4302542.7406420/94‑1 (MQ=60)
                                                                                      GAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGC       >  SRR4302542.3762821/1‑94 (MQ=60)
                                                                                       AGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGCA      >  SRR4302542.5627895/1‑94 (MQ=60)
                                                                                        GAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGCAG     <  SRR4302542.2061012/94‑1 (MQ=60)
                                                                                         AAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGCAGG    <  SRR4302542.7157052/94‑1 (MQ=60)
                                                                                           GCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGCAGGCT  >  SRR4302542.4334529/1‑94 (MQ=60)
                                                                                           |                                                                                             
CAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGCAGGCT  >  NC_000913/3738632‑3738816

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑