Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,739,262 T→C intergenic (‑51/+51) yiaI ← / ← yiaJ hypothetical protein/putative regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,739,2620TC86.4% 870.3 / 124.0 359intergenic (‑51/+51)yiaI/yiaJhypothetical protein/putative regulator
Reads supporting (aligned to +/- strand):  ref base T (22/27);  new base C (142/168);  total (164/195)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.02e-01

Only 100 of 360 total aligned reads displayed.

ACCGATACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATCCCA  >  NC_000913/3739170‑3739353
                                                                                            |                                                                                           
   gATACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCt                                                                                          >  1:3100255/1‑93 (MQ=255)
   gATACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCt                                                                                          >  2:3623802/1‑93 (MQ=255)
   gATACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCt                                                                                          >  2:2596125/1‑93 (MQ=255)
    aTACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCtt                                                                                         <  1:4690803/93‑1 (MQ=255)
    aTACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCtt                                                                                         <  1:6124574/93‑1 (MQ=255)
       cATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGa                                                                                      <  2:6133738/93‑1 (MQ=255)
       cATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGa                                                                                      <  2:7350838/93‑1 (MQ=255)
        aTTTCGTCGCATCCGCAATAATAAGCCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGAt                                                                                     <  2:2995148/93‑1 (MQ=255)
        aTTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGAt                                                                                     >  1:5492239/1‑93 (MQ=255)
         tttCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATc                                                                                    >  1:1231973/1‑93 (MQ=255)
            cgtcgCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCaa                                                                                 <  2:278785/93‑1 (MQ=255)
            cgtcgCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCaa                                                                                 <  2:725105/93‑1 (MQ=255)
             gtcgCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAAc                                                                                >  2:6868874/1‑93 (MQ=255)
              tcgCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACg                                                                               <  2:1626348/93‑1 (MQ=255)
              tcgCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACg                                                                               >  2:1671039/1‑93 (MQ=255)
               cgCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGa                                                                              <  1:3741175/93‑1 (MQ=255)
                gCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGaa                                                                             <  1:5719443/93‑1 (MQ=255)
                gCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGaa                                                                             <  1:5115897/93‑1 (MQ=255)
                 cATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAg                                                                            >  2:4951023/1‑93 (MQ=255)
                  aTCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAgg                                                                           <  1:2159053/93‑1 (MQ=255)
                   tCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGa                                                                          >  1:7316123/1‑93 (MQ=255)
                     cGCAATAATAAACCCGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGaaa                                                                        <  2:4376826/93‑1 (MQ=255)
                      gCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAAt                                                                       <  2:3495704/93‑1 (MQ=255)
                         ataataAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGtt                                                                    <  1:5594544/93‑1 (MQ=255)
                          taataaACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTa                                                                   >  1:78899/1‑93 (MQ=255)
                            ataaACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTaaa                                                                 <  1:2124838/93‑1 (MQ=255)
                            ataaACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTaaa                                                                 <  2:2108974/93‑1 (MQ=255)
                             taaACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAg                                                                >  1:6177988/1‑93 (MQ=255)
                               aaCCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGtt                                                              <  2:7115240/93‑1 (MQ=255)
                                aCCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGttt                                                             >  1:6025603/1‑93 (MQ=255)
                                aCCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGttt                                                             >  1:6628726/1‑93 (MQ=255)
                                 ccGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGtttt                                                            >  2:4549741/1‑93 (MQ=255)
                                  cGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTg                                                           <  2:13828/93‑1 (MQ=255)
                                  cGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTg                                                           <  2:2367212/93‑1 (MQ=255)
                                  cGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTg                                                           <  1:4008452/93‑1 (MQ=255)
                                   ggTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTgg                                                          <  1:3294843/93‑1 (MQ=255)
                                   ggTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTgg                                                          <  1:4294343/93‑1 (MQ=255)
                                    gTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGc                                                         >  2:3241528/1‑93 (MQ=255)
                                       cATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACt                                                      >  2:6433840/1‑93 (MQ=255)
                                        aTGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTAAAAGTTTTGGCACtt                                                     <  2:3738129/93‑1 (MQ=255)
                                         tGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTg                                                    <  2:5305347/93‑1 (MQ=255)
                                         tGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTg                                                    >  1:4117905/1‑93 (MQ=255)
                                         tGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTg                                                    >  1:6722933/1‑93 (MQ=255)
                                         tGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTg                                                    <  2:550651/93‑1 (MQ=255)
                                         tGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTg                                                    >  1:2585213/1‑93 (MQ=255)
                                          gATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGt                                                   <  1:4593193/93‑1 (MQ=255)
                                            tCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTcc                                                 >  2:6374545/1‑93 (MQ=255)
                                            tCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTcc                                                 >  2:579926/1‑93 (MQ=255)
                                            tCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTcc                                                 >  2:5647753/1‑93 (MQ=255)
                                            tCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTcc                                                 <  1:316597/93‑1 (MQ=255)
                                             cACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCa                                                >  1:2236470/1‑93 (MQ=255)
                                              aCTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCaa                                               <  1:2393709/93‑1 (MQ=255)
                                              aCTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCaa                                               <  2:2279708/93‑1 (MQ=255)
                                               cTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCaaa                                              <  1:6811523/93‑1 (MQ=255)
                                               cTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCaaa                                              <  1:5416044/93‑1 (MQ=255)
                                               cTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCaaa                                              >  2:1025958/1‑93 (MQ=255)
                                               cTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCaaa                                              >  1:294995/1‑93 (MQ=255)
                                                tCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAg                                             <  2:5372394/93‑1 (MQ=255)
                                                 ccTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGc                                            <  1:1530363/93‑1 (MQ=255)
                                                   tttGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGt                                          <  1:7481821/93‑1 (MQ=255)
                                                    ttGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGtt                                         <  2:7042612/93‑1 (MQ=255)
                                                     tGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTa                                        <  2:5066067/93‑1 (MQ=255)
                                                     tGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTa                                        >  2:4779585/1‑93 (MQ=255)
                                                      gCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTAt                                       <  2:5259243/93‑1 (MQ=255)
                                                      gCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTAt                                       >  1:5032122/1‑93 (MQ=255)
                                                       cACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTAtg                                      >  1:1015752/1‑93 (MQ=255)
                                                         cTAAAACAGCAGAGTGCCAGAGAGCGCCTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTAtgtg                                    <  2:2941220/93‑1 (MQ=255)
                                                           aaaaCAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGAt                                  <  1:5234055/93‑1 (MQ=255)
                                                            aaaCAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATc                                 <  1:6932123/93‑1 (MQ=255)
                                                             aaCAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATcg                                <  1:708856/93‑1 (MQ=255)
                                                                   agagTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCa                          >  1:274714/1‑93 (MQ=255)
                                                                   agagTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCa                          >  2:41090/1‑93 (MQ=255)
                                                                    gagTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAg                         <  1:1570308/93‑1 (MQ=255)
                                                                     agTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGTACTTGTCCAAAGCGTTATGTGATCGCGCCCAgg                        <  2:1768777/93‑1 (MQ=255)
                                                                     agTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAgg                        <  2:6783804/93‑1 (MQ=255)
                                                                      gTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGt                       >  1:1879218/1‑93 (MQ=255)
                                                                       tGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTc                      >  1:6443370/1‑93 (MQ=255)
                                                                        gCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCa                     <  1:6409725/93‑1 (MQ=255)
                                                                          cAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATc                   <  2:3165597/93‑1 (MQ=255)
                                                                           agagagCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATcc                  >  2:2422605/1‑93 (MQ=255)
                                                                            gagagCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATccc                 >  1:1757069/1‑93 (MQ=255)
                                                                            gagagCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATccc                 <  2:5616584/93‑1 (MQ=255)
                                                                               agCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGa              <  2:1172211/93‑1 (MQ=255)
                                                                                gcgcGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGAc             <  2:584650/93‑1 (MQ=255)
                                                                                gcgcGTCCCTACCGCTTTGATCCAACGAAGGAAATGTAAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGAc             >  1:4458308/1‑93 (MQ=255)
                                                                                 cgcgTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACa            <  1:626661/93‑1 (MQ=255)
                                                                                 cgcgTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACa            >  2:6654440/1‑93 (MQ=255)
                                                                                    gTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTa         >  1:4343385/1‑93 (MQ=255)
                                                                                    gTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTa         <  1:6323129/93‑1 (MQ=255)
                                                                                     tCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTaa        >  1:2689089/1‑93 (MQ=255)
                                                                                     tCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTaa        >  2:3394367/1‑93 (MQ=255)
                                                                                     tCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTaa        >  1:2797327/1‑93 (MQ=255)
                                                                                       ccTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAAt      >  1:951067/1‑93 (MQ=255)
                                                                                        cTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATc     >  2:852403/1‑93 (MQ=255)
                                                                                        cTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATc     <  1:3467819/93‑1 (MQ=255)
                                                                                        cTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATc     >  2:2527681/1‑93 (MQ=255)
                                                                                        cTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATc     >  2:148400/1‑93 (MQ=255)
                                                                                         tACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATcc    >  1:3688718/1‑93 (MQ=255)
                                                                                         tACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATcc    >  1:4862353/1‑93 (MQ=255)
                                                                                           cTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATCCCa  >  1:340436/1‑93 (MQ=255)
                                                                                            |                                                                                           
ACCGATACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATCCCA  >  NC_000913/3739170‑3739353

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 203 total aligned reads displayed.
AACCGATACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATCCCAGT  >  NC_000913/3739169‑3739355
                                                                                             |                                                                                             
AACCGATACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACC                                                                                               <  SRR4302542.7409857/94‑1 (MQ=60)
AACCGATACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACC                                                                                               >  SRR4302542.1412978/1‑94 (MQ=60)
AACCGATACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACC                                                                                               <  SRR4302542.6331618/94‑1 (MQ=60)
 CCCGATACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCG                                                                                              <  SRR4302542.7592270/94‑1 (MQ=60)
 ACCGATACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCG                                                                                              <  SRR4302542.7114381/94‑1 (MQ=60)
 ACCGATACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCG                                                                                              <  SRR4302542.7249924/94‑1 (MQ=60)
 ACCGATACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTCGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCG                                                                                              <  SRR4302542.1334832/94‑1 (MQ=60)
  CCGATACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGC                                                                                             >  SRR4302542.470814/1‑94 (MQ=60)
   CGATACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCT                                                                                            <  SRR4302542.5991883/94‑1 (MQ=60)
   CGATACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCT                                                                                            >  SRR4302542.3129713/1‑94 (MQ=60)
    GATACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTT                                                                                           <  SRR4302542.2721221/94‑1 (MQ=60)
     ATACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTT                                                                                          <  SRR4302542.4736606/94‑1 (MQ=60)
     ATACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTT                                                                                          <  SRR4302542.6183836/94‑1 (MQ=60)
      TACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTG                                                                                         >  SRR4302542.5511497/1‑94 (MQ=60)
      TACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTG                                                                                         <  SRR4302542.3476769/94‑1 (MQ=60)
      TACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTG                                                                                         <  SRR4302542.7115788/94‑1 (MQ=60)
       ACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGA                                                                                        >  SRR4302542.3033484/1‑94 (MQ=60)
        CATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGAT                                                                                       >  SRR4302542.2782899/1‑94 (MQ=60)
        CATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGAT                                                                                       <  SRR4302542.1546203/94‑1 (MQ=60)
        CATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGAT                                                                                       >  SRR4302542.5545589/1‑94 (MQ=60)
         ATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATC                                                                                      >  SRR4302542.7307978/1‑94 (MQ=60)
         ATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATC                                                                                      >  SRR4302542.3293432/1‑94 (MQ=60)
         ATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATC                                                                                      <  SRR4302542.4478088/94‑1 (MQ=60)
         ATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATC                                                                                      >  SRR4302542.1242568/1‑94 (MQ=60)
          TTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCC                                                                                     <  SRR4302542.5365613/94‑1 (MQ=60)
           TTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCA                                                                                    >  SRR4302542.3660825/1‑94 (MQ=60)
             CGTCGCATCCGCAATAATAAACCGGTTCATGATCCCTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTCCCGCTTTGATCCAAC                                                                                  <  SRR4302542.3716605/94‑1 (MQ=60)
             CGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAAC                                                                                  >  SRR4302542.5216676/1‑94 (MQ=60)
             CGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAAC                                                                                  >  SRR4302542.5711406/1‑94 (MQ=60)
             CGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAAC                                                                                  <  SRR4302542.5703807/94‑1 (MQ=60)
              GTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACG                                                                                 <  SRR4302542.2751610/94‑1 (MQ=60)
              GTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACG                                                                                 >  SRR4302542.1004521/1‑94 (MQ=60)
              GTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACG                                                                                 <  SRR4302542.6501114/94‑1 (MQ=60)
              GTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACG                                                                                 <  SRR4302542.791150/94‑1 (MQ=60)
              GTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACG                                                                                 >  SRR4302542.5088095/1‑94 (MQ=60)
                CGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAA                                                                               >  SRR4302542.478352/1‑94 (MQ=60)
                CGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAA                                                                               >  SRR4302542.5508666/1‑94 (MQ=60)
                CGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAA                                                                               <  SRR4302542.3778199/94‑1 (MQ=60)
                CGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAA                                                                               <  SRR4302542.198489/94‑1 (MQ=60)
                 GCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAG                                                                              <  SRR4302542.5165582/94‑1 (MQ=60)
                 GCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAG                                                                              >  SRR4302542.2203618/1‑94 (MQ=60)
                 GCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAG                                                                              <  SRR4302542.3665164/94‑1 (MQ=60)
                 GCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAG                                                                              <  SRR4302542.5774959/94‑1 (MQ=60)
                 GCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAG                                                                              <  SRR4302542.4033323/94‑1 (MQ=60)
                  CGTCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGG                                                                             >  SRR4302542.4923188/1‑94 (MQ=60)
                  CATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGG                                                                             >  SRR4302542.6903283/1‑94 (MQ=60)
                  CATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGG                                                                             >  SRR4302542.2738751/1‑94 (MQ=60)
                   ATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGA                                                                            >  SRR4302542.5074483/1‑94 (MQ=60)
                   ATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGA                                                                            >  SRR4302542.6314633/1‑94 (MQ=60)
                   ATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGA                                                                            <  SRR4302542.2177646/94‑1 (MQ=60)
                   ATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGA                                                                            >  SRR4302542.7387791/1‑94 (MQ=60)
                     CCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAA                                                                          >  SRR4302542.201523/1‑94 (MQ=60)
                     CCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAA                                                                          >  SRR4302542.5299207/1‑94 (MQ=60)
                      CGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAAT                                                                         <  SRR4302542.4119589/94‑1 (MQ=60)
                      CGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAAT                                                                         >  SRR4302542.3830196/1‑94 (MQ=60)
                      CGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAAT                                                                         <  SRR4302542.1360062/94‑1 (MQ=60)
                      CGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAAT                                                                         >  SRR4302542.2152320/1‑94 (MQ=60)
                       GCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTTCCGCTTTGATCCAACGAAGGAAATG                                                                        <  SRR4302542.5943604/94‑1 (MQ=60)
                        CAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGT                                                                       <  SRR4302542.6719071/94‑1 (MQ=60)
                        CAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGT                                                                       >  SRR4302542.3013638/1‑94 (MQ=60)
                         AATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTT                                                                      <  SRR4302542.827007/94‑1 (MQ=60)
                          ATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTA                                                                     <  SRR4302542.5648901/94‑1 (MQ=60)
                          ATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTA                                                                     <  SRR4302542.7077359/94‑1 (MQ=60)
                          ATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTA                                                                     >  SRR4302542.79557/1‑94 (MQ=60)
                           TAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAA                                                                    <  SRR4302542.1649786/94‑1 (MQ=60)
                           TAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAA                                                                    >  SRR4302542.18623/1‑94 (MQ=60)
                            AATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAA                                                                   <  SRR4302542.4125775/94‑1 (MQ=60)
                            AATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAA                                                                   <  SRR4302542.4372860/94‑1 (MQ=60)
                            AATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAA                                                                   >  SRR4302542.2167779/1‑94 (MQ=60)
                            AATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAA                                                                   <  SRR4302542.452230/94‑1 (MQ=60)
                            AATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAA                                                                   >  SRR4302542.6194783/1‑94 (MQ=60)
                             ATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAG                                                                  <  SRR4302542.2143176/94‑1 (MQ=60)
                             ATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAG                                                                  <  SRR4302542.4715706/94‑1 (MQ=60)
                             ATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAG                                                                  >  SRR4302542.3489355/1‑94 (MQ=60)
                             ATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAG                                                                  <  SRR4302542.6756257/94‑1 (MQ=60)
                             ATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAG                                                                  >  SRR4302542.6237881/1‑94 (MQ=60)
                              TAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGT                                                                 <  SRR4302542.3329011/94‑1 (MQ=60)
                              TAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGT                                                                 <  SRR4302542.295439/94‑1 (MQ=60)
                                AACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTT                                                               >  SRR4302542.6694079/1‑94 (MQ=60)
                                AACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTT                                                               >  SRR4302542.6083952/1‑94 (MQ=60)
                                AACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTT                                                               <  SRR4302542.2286227/94‑1 (MQ=60)
                                 ACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTT                                                              <  SRR4302542.4189324/94‑1 (MQ=60)
                                  CCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTG                                                             <  SRR4302542.5629380/94‑1 (MQ=60)
                                   CGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGG                                                            <  SRR4302542.6830112/94‑1 (MQ=60)
                                   CGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGG                                                            <  SRR4302542.7549189/94‑1 (MQ=60)
                                   CGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGG                                                            <  SRR4302542.2164399/94‑1 (MQ=60)
                                   CGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGG                                                            <  SRR4302542.4047975/94‑1 (MQ=60)
                                    GGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGC                                                           <  SRR4302542.3325934/94‑1 (MQ=60)
                                    GGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGC                                                           <  SRR4302542.4336580/94‑1 (MQ=60)
                                       TCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACT                                                        >  SRR4302542.3123889/1‑94 (MQ=60)
                                       TCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACT                                                        <  SRR4302542.7329783/94‑1 (MQ=60)
                                       TCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACT                                                        <  SRR4302542.3765648/94‑1 (MQ=60)
                                       TCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACT                                                        >  SRR4302542.6479847/1‑94 (MQ=60)
                                        CATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTT                                                       >  SRR4302542.2895375/1‑94 (MQ=60)
                                         ATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTG                                                      >  SRR4302542.6789131/1‑94 (MQ=60)
                                         ATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTG                                                      <  SRR4302542.6099118/94‑1 (MQ=60)
                                         ATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTG                                                      >  SRR4302542.2610257/1‑94 (MQ=60)
                                         ATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTG                                                      >  SRR4302542.4158474/1‑94 (MQ=60)
                                         ATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTG                                                      >  SRR4302542.4766432/1‑94 (MQ=60)
                                          TGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTGCCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGT                                                     <  SRR4302542.3198688/94‑1 (MQ=60)
                                          TGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGT                                                     <  SRR4302542.7332527/94‑1 (MQ=60)
                                          TGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGT                                                     <  SRR4302542.2213405/94‑1 (MQ=60)
                                           GATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTC                                                    <  SRR4302542.4638113/94‑1 (MQ=60)
                                            ATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCC                                                   <  SRR4302542.7515500/94‑1 (MQ=60)
                                             TCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCA                                                  >  SRR4302542.5229744/1‑94 (MQ=60)
                                             TCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCA                                                  >  SRR4302542.916960/1‑94 (MQ=60)
                                             TCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCA                                                  <  SRR4302542.4356858/94‑1 (MQ=60)
                                             TCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCA                                                  >  SRR4302542.2255706/1‑94 (MQ=60)
                                             TCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCA                                                  <  SRR4302542.319352/94‑1 (MQ=60)
                                             TCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCA                                                  <  SRR4302542.6358794/94‑1 (MQ=60)
                                              CACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAA                                                 >  SRR4302542.1397766/1‑94 (MQ=60)
                                              CACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAA                                                 >  SRR4302542.5521672/1‑94 (MQ=60)
                                              CACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAA                                                 <  SRR4302542.6905555/94‑1 (MQ=60)
                                               ACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAA                                                <  SRR4302542.2416625/94‑1 (MQ=60)
                                               ACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAA                                                >  SRR4302542.226026/1‑94 (MQ=60)
                                               ACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAA                                                >  SRR4302542.1754084/1‑94 (MQ=60)
                                               ACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAA                                                >  SRR4302542.297572/1‑94 (MQ=60)
                                                CTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAG                                               <  SRR4302542.613320/94‑1 (MQ=60)
                                                CTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAG                                               >  SRR4302542.1029774/1‑94 (MQ=60)
                                                CTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAG                                               <  SRR4302542.5468635/94‑1 (MQ=60)
                                                CTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAG                                               >  SRR4302542.4185934/1‑94 (MQ=60)
                                                CTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAG                                               <  SRR4302542.6878486/94‑1 (MQ=60)
                                                 TCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGC                                              <  SRR4302542.4609567/94‑1 (MQ=60)
                                                 TCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGC                                              <  SRR4302542.2805580/94‑1 (MQ=60)
                                                  CCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCG                                             <  SRR4302542.1543578/94‑1 (MQ=60)
                                                  CCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCG                                             <  SRR4302542.5043232/94‑1 (MQ=60)
                                                  CCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCG                                             <  SRR4302542.2593650/94‑1 (MQ=60)
                                                   CTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGT                                            >  SRR4302542.1558465/1‑94 (MQ=60)
                                                    TTTGCACTAAAACAGGAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTT                                           >  SRR4302542.6884583/1‑94 (MQ=60)
                                                    TTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTT                                           <  SRR4302542.7555168/94‑1 (MQ=60)
                                                      TGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTAT                                         >  SRR4302542.4592542/1‑94 (MQ=60)
                                                      TGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTAT                                         >  SRR4302542.6408343/1‑94 (MQ=60)
                                                      TGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTAT                                         >  SRR4302542.792099/1‑94 (MQ=60)
                                                      TGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTAT                                         >  SRR4302542.5264290/1‑94 (MQ=60)
                                                      TGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTAT                                         >  SRR4302542.5080971/1‑94 (MQ=60)
                                                       GCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATG                                        >  SRR4302542.1024501/1‑94 (MQ=60)
                                                       GCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATG                                        <  SRR4302542.6599892/94‑1 (MQ=60)
                                                       GCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATG                                        <  SRR4302542.6590338/94‑1 (MQ=60)
                                                        CACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGT                                       <  SRR4302542.6259357/94‑1 (MQ=60)
                                                         ACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTG                                      <  SRR4302542.6437452/94‑1 (MQ=60)
                                                           TAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGAT                                    <  SRR4302542.2258159/94‑1 (MQ=60)
                                                           TAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGAT                                    >  SRR4302542.266865/1‑94 (MQ=60)
                                                            AAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATC                                   <  SRR4302542.5284945/94‑1 (MQ=60)
                                                             AAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCG                                  <  SRR4302542.7000183/94‑1 (MQ=60)
                                                             AAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCG                                  >  SRR4302542.7433701/1‑94 (MQ=60)
                                                             AAACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCG                                  <  SRR4302542.287476/94‑1 (MQ=60)
                                                              AACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGC                                 >  SRR4302542.6198110/1‑94 (MQ=60)
                                                              AACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGC                                 <  SRR4302542.714975/94‑1 (MQ=60)
                                                              AACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGC                                 <  SRR4302542.6793238/94‑1 (MQ=60)
                                                               ACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCG                                <  SRR4302542.1748545/94‑1 (MQ=60)
                                                               ACAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCG                                <  SRR4302542.395584/94‑1 (MQ=60)
                                                                CAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGC                               >  SRR4302542.5573431/1‑94 (MQ=60)
                                                                CAGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGC                               >  SRR4302542.865898/1‑94 (MQ=60)
                                                                 AGCAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCC                              >  SRR4302542.2602569/1‑94 (MQ=60)
                                                                   CAGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCA                            >  SRR4302542.277064/1‑94 (MQ=60)
                                                                    AGAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAG                           >  SRR4302542.2615564/1‑94 (MQ=60)
                                                                     GAGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGG                          <  SRR4302542.1583871/94‑1 (MQ=60)
                                                                      AGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGT                         >  SRR4302542.3776432/1‑94 (MQ=60)
                                                                      AGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGT                         >  SRR4302542.1895488/1‑94 (MQ=60)
                                                                      AGTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGT                         >  SRR4302542.5099741/1‑94 (MQ=60)
                                                                       GTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTC                        <  SRR4302542.6470734/94‑1 (MQ=60)
                                                                       GTGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTC                        >  SRR4302542.6506826/1‑94 (MQ=60)
                                                                        TGCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCA                       <  SRR4302542.184432/94‑1 (MQ=60)
                                                                         GCCAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCAT                      <  SRR4302542.6472891/94‑1 (MQ=60)
                                                                           CAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCC                    >  SRR4302542.6512176/1‑94 (MQ=60)
                                                                           CAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCC                    <  SRR4302542.435789/94‑1 (MQ=60)
                                                                           CAGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCC                    <  SRR4302542.4448261/94‑1 (MQ=60)
                                                                            AGAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCC                   >  SRR4302542.1772320/1‑94 (MQ=60)
                                                                             GAGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCT                  >  SRR4302542.3130141/1‑94 (MQ=60)
                                                                              AGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTG                 <  SRR4302542.3685960/94‑1 (MQ=60)
                                                                              AGAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCNN                 >  SRR4302542.3263755/1‑94 (MQ=60)
                                                                               GAGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGA                >  SRR4302542.2556043/1‑94 (MQ=60)
                                                                                AGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGAC               <  SRR4302542.6759864/94‑1 (MQ=60)
                                                                                AGCGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTAAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGAC               >  SRR4302542.4502040/1‑94 (MQ=60)
                                                                                  CGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAG             <  SRR4302542.632051/94‑1 (MQ=60)
                                                                                  CGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAG             <  SRR4302542.6211878/94‑1 (MQ=60)
                                                                                  CGCGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAG             <  SRR4302542.3486678/94‑1 (MQ=60)
                                                                                    CGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTA           >  SRR4302542.6238763/1‑94 (MQ=60)
                                                                                    CGTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTA           >  SRR4302542.4386055/1‑94 (MQ=60)
                                                                                     GTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAA          >  SRR4302542.2715020/1‑94 (MQ=60)
                                                                                     GTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAA          >  SRR4302542.2824241/1‑94 (MQ=60)
                                                                                     GTCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAA          <  SRR4302542.6385444/94‑1 (MQ=60)
                                                                                      TCCCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAA         <  SRR4302542.3194997/94‑1 (MQ=60)
                                                                                        CCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATC       >  SRR4302542.1185189/1‑94 (MQ=60)
                                                                                        CCTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATC       >  SRR4302542.1283358/1‑94 (MQ=60)
                                                                                         CTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATCC      <  SRR4302542.1837862/94‑1 (MQ=60)
                                                                                         CTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATCC      >  SRR4302542.6360353/1‑94 (MQ=60)
                                                                                         CTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATCC      >  SRR4302542.4177176/1‑94 (MQ=60)
                                                                                         CTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATCC      >  SRR4302542.4909705/1‑94 (MQ=60)
                                                                                         CTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATCC      >  SRR4302542.6071483/1‑94 (MQ=60)
                                                                                         CTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATCC      >  SRR4302542.4853270/1‑94 (MQ=60)
                                                                                         CTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATCC      >  SRR4302542.3725196/1‑94 (MQ=60)
                                                                                         CTACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATCC      <  SRR4302542.3500292/94‑1 (MQ=60)
                                                                                           ACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATCCCA    >  SRR4302542.343390/1‑94 (MQ=60)
                                                                                           ACCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATCCCA    <  SRR4302542.4994147/94‑1 (MQ=60)
                                                                                            CCGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATCCCAG   >  SRR4302542.4082473/1‑94 (MQ=60)
                                                                                             CGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATCCCAGT  <  SRR4302542.5920612/94‑1 (MQ=60)
                                                                                             CGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATCCCAGT  <  SRR4302542.2313067/94‑1 (MQ=60)
                                                                                             CGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATCCCAGT  >  SRR4302542.6633673/1‑94 (MQ=60)
                                                                                             CGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATCCCAGT  <  SRR4302542.6852155/94‑1 (MQ=60)
                                                                                             |                                                                                             
AACCGATACATTTCGTCGCATCCGCAATAATAAACCGGTTCATGATCACTCCTTTGCACTAAAACAGCAGAGTGCCAGAGAGCGCGTCCCTACTGCTTTGATCCAACGAAGGAAATGTTAAAGTTTTGGCACTTGTCCAAAGCGTTATGTGATCGCGCCCAGGTCATCCCTGACAGTAAATCCCAGT  >  NC_000913/3739169‑3739355

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑