Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,771,793	T→C	V629A (GTG→GCG)	mtlA →	PTS system, mannitol‑specific enzyme IIABC components

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,771,793	0	T	C	82.7%	655.7 / 131.6	301	V629A (GTG→GCG)	mtlA	PTS system, mannitol‑specific enzyme IIABC components
Reads supporting (aligned to +/- strand): ref base T (28/24); new base C (148/101); total (176/125)
Fisher's exact test for biased strand distribution p-value = 5.36e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.51e-01

Only 100 of 308 total aligned reads displayed.

AGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCA  >  NC_000913/3771703‑3771884

aGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAgcgc                                                                                           >  1:5565918/1‑93 (MQ=255)

aGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAgcgc                                                                                           >  1:1907223/1‑93 (MQ=255)

 gCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCt                                                                                          >  1:2238316/1‑93 (MQ=255)

  cacaTTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTg                                                                                         >  1:408246/1‑93 (MQ=255)

  cacaTTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTg                                                                                         <  2:3045974/93‑1 (MQ=255)

   acaTTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTgg                                                                                        >  2:7338903/1‑93 (MQ=255)

     aTTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGaa                                                                                      >  1:2423497/1‑93 (MQ=255)

      ttCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAAc                                                                                     >  2:4352916/1‑93 (MQ=255)

      ttCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAAc                                                                                     >  2:5627226/1‑93 (MQ=255)

      ttCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAAc                                                                                     >  2:2315612/1‑93 (MQ=255)

      ttCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAAc                                                                                     >  1:6860035/1‑93 (MQ=255)

      ttCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAAc                                                                                     <  2:249249/93‑1 (MQ=255)

       tCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAAct                                                                                    >  2:5514935/1‑93 (MQ=255)

         aGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTTCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAActgc                                                                                  <  2:1416366/93‑1 (MQ=255)

         aGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAActgc                                                                                  <  1:6182154/93‑1 (MQ=255)

         aGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAActgc                                                                                  >  2:1885090/1‑93 (MQ=255)

         aGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAActgc                                                                                  <  2:3365717/93‑1 (MQ=255)

          ggTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAActgct                                                                                 <  1:5875746/93‑1 (MQ=255)

          ggTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAActgct                                                                                 <  1:4990362/93‑1 (MQ=255)

          ggTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAActgct                                                                                 <  2:1185651/93‑1 (MQ=255)

          ggTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAActgct                                                                                 <  2:4829154/93‑1 (MQ=255)

            ttATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTgg                                                                               >  1:865595/1‑93 (MQ=255)

            ttATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTgg                                                                               >  2:2616837/1‑93 (MQ=255)

            ttATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTgg                                                                               <  1:5142978/93‑1 (MQ=255)

              aTCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCa                                                                             <  1:2014146/93‑1 (MQ=255)

               tCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAg                                                                            >  1:141590/1‑93 (MQ=255)

                 aCCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGt                                                                          <  1:1039848/93‑1 (MQ=255)

                 aCCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGt                                                                          <  2:363220/93‑1 (MQ=255)

                 aCCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCAAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGt                                                                          >  1:6218698/1‑93 (MQ=255)

                  ccAGCCTGACCAATCCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTc                                                                         >  2:5191187/1‑93 (MQ=255)

                   cAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCg                                                                        >  2:1046627/1‑93 (MQ=255)

                    aGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCgt                                                                       >  2:5740191/1‑93 (MQ=255)

                     gCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCgta                                                                      >  2:761525/1‑93 (MQ=255)

                     gCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCgta                                                                      >  2:6042329/1‑93 (MQ=255)

                     gCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCgta                                                                      >  1:3398294/1‑93 (MQ=255)

                      ccTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCgtaa                                                                     <  1:515917/93‑1 (MQ=255)

                      ccTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCgtaa                                                                     >  2:2749251/1‑93 (MQ=255)

                       cTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCgtaag                                                                    >  2:391778/1‑93 (MQ=255)

                        tGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCgtaagt                                                                   >  2:6993062/1‑93 (MQ=255)

                        tGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCgtaagt                                                                   >  1:4667100/1‑93 (MQ=255)

                          aCCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCgtaagtaa                                                                 <  1:1203060/93‑1 (MQ=255)

                          aCCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCgtaagtaa                                                                 >  2:3441008/1‑93 (MQ=255)

                           ccAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTaat                                                                >  2:7134583/1‑93 (MQ=255)

                            cAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTaatc                                                               >  2:1558265/1‑93 (MQ=255)

                             aaTGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTaatcc                                                              >  2:4299844/1‑93 (MQ=255)

                             aaTGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTaatcc                                                              >  1:3097758/1‑93 (MQ=255)

                              aTGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTaatcca                                                             >  1:2622461/1‑93 (MQ=255)

                               tGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTaatccaa                                                            <  2:1651049/93‑1 (MQ=255)

                                gCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTaatccaat                                                           <  2:3191422/93‑1 (MQ=255)

                                 cACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTaatccaatc                                                          <  1:664539/93‑1 (MQ=255)

                                  aCTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTaatccaatcc                                                         <  2:6710916/93‑1 (MQ=255)

                                   cTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATccc                                                        >  2:1939166/1‑93 (MQ=255)

                                    tGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCa                                                       >  2:4775009/1‑93 (MQ=255)

                                    tGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCa                                                       >  1:155286/1‑93 (MQ=255)

                                       atgatgAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCAccc                                                    <  1:7479723/93‑1 (MQ=255)

                                        tgatgaGTTCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCct                                                   >  1:4285148/1‑93 (MQ=255)

                                         gatgaGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCctc                                                  <  1:6302505/93‑1 (MQ=255)

                                          atgaGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCctct                                                 >  2:4074025/1‑93 (MQ=255)

                                           tgaGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCtctc                                                <  1:5785912/93‑1 (MQ=255)

                                           tgaGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCtctc                                                >  2:2153329/1‑93 (MQ=255)

                                            gaGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTcc                                               >  1:3527477/1‑93 (MQ=255)

                                               tCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGAAAGTAATCCAATCCCACCCCCTCcaca                                            >  1:1246589/1‑93 (MQ=255)

                                                ccGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACAt                                           <  1:4913515/93‑1 (MQ=255)

                                                 cGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATg                                          >  1:1661900/1‑93 (MQ=255)

                                                 cGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATg                                          >  2:4949292/1‑93 (MQ=255)

                                                  gTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATgg                                         >  1:6450144/1‑93 (MQ=255)

                                                   tCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGGCGTAAGTAATCCAATCCCACCCTCTCCACATGga                                        >  1:6537098/1‑93 (MQ=255)

                                                     aTCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGgaga                                      <  2:6372014/93‑1 (MQ=255)

                                                      tCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGaa                                     >  1:6333538/1‑93 (MQ=255)

                                                      tCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGaa                                     >  1:5134513/1‑93 (MQ=255)

                                                        gAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAgg                                   >  2:2658845/1‑93 (MQ=255)

                                                        gAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAgg                                   <  2:6813642/93‑1 (MQ=255)

                                                        gAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAgg                                   <  2:2066000/93‑1 (MQ=255)

                                                         aGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGt                                  <  1:5573796/93‑1 (MQ=255)

                                                         aGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGt                                  <  1:5040734/93‑1 (MQ=255)

                                                         aGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGt                                  >  1:6783737/1‑93 (MQ=255)

                                                         aGCGTCTGGCACACACCACCAGCGGGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGaggaggg                                  >  1:2479460/1‑92 (MQ=255)

                                                          gCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTg                                 >  2:1316702/1‑93 (MQ=255)

                                                           cGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTgg                                >  1:3799243/1‑93 (MQ=255)

                                                             tCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTgggg                              <  1:3982205/93‑1 (MQ=255)

                                                              cTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGt                             <  2:3825262/93‑1 (MQ=255)

                                                              cTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGt                             <  2:6397751/93‑1 (MQ=255)

                                                               tGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGtt                            >  2:6302423/1‑93 (MQ=255)

                                                                ggCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTa                           >  1:7094504/1‑93 (MQ=255)

                                                                      caccacCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGcc                     <  1:7246977/93‑1 (MQ=255)

                                                                       accaccAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCt                    >  2:5551812/1‑93 (MQ=255)

                                                                         caccaGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGa                  <  1:5984882/93‑1 (MQ=255)

                                                                          accaGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGAt                 >  1:5389569/1‑93 (MQ=255)

                                                                          accaGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGAt                 <  1:2740773/93‑1 (MQ=255)

                                                                           ccaGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATg                <  2:3005279/93‑1 (MQ=255)

                                                                            caGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATgc               <  2:4171995/93‑1 (MQ=255)

                                                                            caGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATgc               <  1:4396041/93‑1 (MQ=255)

                                                                             aGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATgcg              >  1:4831920/1‑93 (MQ=255)

                                                                              gCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCGCATGGAGAAGGTGGGGTTAATTGCCTGATgcgc             >  2:4871984/1‑93 (MQ=255)

                                                                              gCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATgcgc             <  1:4607161/93‑1 (MQ=255)

                                                                                   gATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGc        <  2:5990505/93‑1 (MQ=255)

                                                                                   gATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGc        >  1:3213137/1‑93 (MQ=255)

                                                                                      gAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTa     >  2:5407931/1‑93 (MQ=255)

                                                                                         gTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCa  <  2:5054871/93‑1 (MQ=255)

                                                                                         gTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCa  <  1:2850466/93‑1 (MQ=255)

AGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCA  >  NC_000913/3771703‑3771884

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CGAGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCGCTACGCTTATCAGG  >  NC_000913/3771701‑3771886

CGAGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCG                                                                                               >  SRR4302542.4815411/1‑94 (MQ=60)

CGAGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCG                                                                                               <  SRR4302542.1537862/94‑1 (MQ=60)

 GAGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGC                                                                                              >  SRR4302542.5619998/1‑94 (MQ=60)

 GAGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGC                                                                                              >  SRR4302542.1923703/1‑94 (MQ=60)

 GAGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGC                                                                                              >  SRR4302542.5190592/1‑94 (MQ=60)

  AGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCT                                                                                             <  SRR4302542.3550317/94‑1 (MQ=60)

  AGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCT                                                                                             >  SRR4302542.2257569/1‑94 (MQ=60)

   GCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTG                                                                                            <  SRR4302542.90474/94‑1 (MQ=60)

   GCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTG                                                                                            >  SRR4302542.411774/1‑94 (MQ=60)

    CACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGG                                                                                           >  SRR4302542.6459440/1‑94 (MQ=60)

    CACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGG                                                                                           >  SRR4302542.6252553/1‑94 (MQ=60)

    CACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGG                                                                                           <  SRR4302542.2099264/94‑1 (MQ=60)

     ACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGA                                                                                          >  SRR4302542.6033031/1‑94 (MQ=60)

      CATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAA                                                                                         >  SRR4302542.2447069/1‑94 (MQ=60)

      CATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAA                                                                                         >  SRR4302542.6128920/1‑94 (MQ=60)

       ATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAAC                                                                                        >  SRR4302542.6927441/1‑94 (MQ=60)

       ATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAAC                                                                                        >  SRR4302542.6560613/1‑94 (MQ=60)

       ATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAAC                                                                                        <  SRR4302542.4666047/94‑1 (MQ=60)

        TTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACT                                                                                       <  SRR4302542.7455125/94‑1 (MQ=60)

        TTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACT                                                                                       <  SRR4302542.2683829/94‑1 (MQ=60)

         TCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTG                                                                                      <  SRR4302542.3191259/94‑1 (MQ=60)

         TCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTG                                                                                      <  SRR4302542.2791250/94‑1 (MQ=60)

         TCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTG                                                                                      <  SRR4302542.823721/94‑1 (MQ=60)

          CAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGC                                                                                     >  SRR4302542.6639815/1‑94 (MQ=60)

           AGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCT                                                                                    >  SRR4302542.6318505/1‑94 (MQ=60)

           AGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCT                                                                                    <  SRR4302542.6242135/94‑1 (MQ=60)

           AGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCT                                                                                    >  SRR4302542.5199132/1‑94 (MQ=60)

            GGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTG                                                                                   <  SRR4302542.5038789/94‑1 (MQ=60)

            GGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTG                                                                                   <  SRR4302542.5932705/94‑1 (MQ=60)

             GTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGG                                                                                  >  SRR4302542.873052/1‑94 (MQ=60)

             GTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGG                                                                                  >  SRR4302542.3791793/1‑94 (MQ=60)

             GTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCATCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGG                                                                                  <  SRR4302542.1316695/94‑1 (MQ=60)

              TTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCTCTGGAACTGCTGGC                                                                                 >  SRR4302542.7066912/1‑94 (MQ=60)

              TTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGC                                                                                 <  SRR4302542.5192967/94‑1 (MQ=60)

               TATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCA                                                                                >  SRR4302542.5396114/1‑94 (MQ=60)

                ATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAG                                                                               <  SRR4302542.2031537/94‑1 (MQ=60)

                ATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAG                                                                               >  SRR4302542.3280636/1‑94 (MQ=60)

                ATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAG                                                                               <  SRR4302542.6382174/94‑1 (MQ=60)

                ATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAG                                                                               >  SRR4302542.142772/1‑94 (MQ=60)

                ATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAG                                                                               <  SRR4302542.1579825/94‑1 (MQ=60)

                 TCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGG                                                                              <  SRR4302542.6185487/94‑1 (MQ=60)

                  tgtgtGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGT                                                                             >  SRR4302542.2445553/6‑94 (MQ=60)

                  CACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGT                                                                             >  SRR4302542.5548786/1‑94 (MQ=60)

                  CACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCAAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGT                                                                             >  SRR4302542.6279948/1‑94 (MQ=60)

                   ACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTC                                                                            <  SRR4302542.3508169/94‑1 (MQ=60)

                   ACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTC                                                                            <  SRR4302542.1048779/94‑1 (MQ=60)

                    CCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCG                                                                           >  SRR4302542.1896219/1‑94 (MQ=60)

                     CAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGT                                                                          >  SRR4302542.6885001/1‑94 (MQ=60)

                     CAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGT                                                                          >  SRR4302542.3719006/1‑94 (MQ=60)

                      AGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTA                                                                         >  SRR4302542.3430172/1‑94 (MQ=60)

                      AGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTA                                                                         >  SRR4302542.975881/1‑94 (MQ=60)

                      AGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTA                                                                         >  SRR4302542.5178429/1‑94 (MQ=60)

                      AGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTA                                                                         >  SRR4302542.7384457/1‑94 (MQ=60)

                        CCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAG                                                                       >  SRR4302542.525206/1‑94 (MQ=60)

                        CCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAG                                                                       <  SRR4302542.520390/94‑1 (MQ=60)

                        CCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAG                                                                       >  SRR4302542.6363469/1‑94 (MQ=60)

                         CTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGT                                                                      >  SRR4302542.4712722/1‑94 (MQ=60)

                           GACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAA                                                                    <  SRR4302542.6166674/94‑1 (MQ=60)

                            ACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAAT                                                                   <  SRR4302542.1213409/94‑1 (MQ=60)

                            ACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAAT                                                                   <  SRR4302542.5620731/94‑1 (MQ=60)

                            ACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAAT                                                                   >  SRR4302542.6808763/1‑94 (MQ=60)

                            ACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAAT                                                                   <  SRR4302542.5620730/94‑1 (MQ=60)

                             CCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATC                                                                  <  SRR4302542.6614085/94‑1 (MQ=60)

                              CAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCC                                                                 >  SRR4302542.3127204/1‑94 (MQ=60)

                               AATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCA                                                                >  SRR4302542.2647800/1‑94 (MQ=60)

                                ATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAA                                                               <  SRR4302542.7600217/94‑1 (MQ=60)

                                 TGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAAT                                                              <  SRR4302542.1341721/94‑1 (MQ=60)

                                   acCTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCC                                                            <  SRR4302542.1220904/92‑1 (MQ=60)

                                   CACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCC                                                            >  SRR4302542.2617430/1‑94 (MQ=60)

                                   CACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCC                                                            <  SRR4302542.670273/94‑1 (MQ=60)

                                    ACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCC                                                           >  SRR4302542.5083643/1‑94 (MQ=60)

                                    ACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCC                                                           >  SRR4302542.5192867/1‑94 (MQ=60)

                                    ACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCC                                                           <  SRR4302542.2127841/94‑1 (MQ=60)

                                     CTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCA                                                          <  SRR4302542.4062670/94‑1 (MQ=60)

                                     CTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCA                                                          >  SRR4302542.156598/1‑94 (MQ=60)

                                     CTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCA                                                          <  SRR4302542.1162941/94‑1 (MQ=60)

                                       GGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACC                                                        <  SRR4302542.4997600/94‑1 (MQ=60)

                                         ATGATGAGTTCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCT                                                      >  SRR4302542.4327295/1‑94 (MQ=60)

                                         ATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCT                                                      <  SRR4302542.7553037/94‑1 (MQ=60)

                                           GATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCT                                                    <  SRR4302542.6724297/94‑1 (MQ=60)

                                           GATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCT                                                    <  SRR4302542.6364596/94‑1 (MQ=60)

                                             TGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCC                                                  >  SRR4302542.3560447/1‑94 (MQ=60)

                                             TGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCC                                                  <  SRR4302542.5842087/94‑1 (MQ=60)

                                              GAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCA                                                 >  SRR4302542.6546568/1‑94 (MQ=60)

                                              GAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCA                                                 >  SRR4302542.4180300/1‑94 (MQ=60)

                                                GTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGAAAGTAATCCAATCCCACCCCCTCCACA                                               >  SRR4302542.1257305/1‑94 (MQ=60)

                                                  CCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATG                                             >  SRR4302542.1676255/1‑94 (MQ=60)

                                                  CCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATG                                             <  SRR4302542.4961302/94‑1 (MQ=60)

                                                   CGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGG                                            >  SRR4302542.4728959/1‑94 (MQ=60)

                                                   CGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGG                                            >  SRR4302542.6513659/1‑94 (MQ=60)

                                                   CGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGG                                            >  SRR4302542.6509223/1‑94 (MQ=60)

                                                   CGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGG                                            >  SRR4302542.144773/1‑94 (MQ=60)

                                                    GTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGA                                           >  SRR4302542.491619/1‑94 (MQ=60)

                                                    GTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGGCGTAAGTAATCCAATCCCACCCTCTCCACATGGA                                           >  SRR4302542.6601557/1‑94 (MQ=60)

                                                     TCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAG                                          >  SRR4302542.323353/1‑94 (MQ=60)

                                                     TCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAG                                          <  SRR4302542.2851501/94‑1 (MQ=60)

                                                      CATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGA                                         >  SRR4302542.2912137/1‑94 (MQ=60)

                                                      CATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGA                                         <  SRR4302542.3971784/94‑1 (MQ=60)

                                                      CATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGA                                         >  SRR4302542.7223731/1‑94 (MQ=60)

                                                      CATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGA                                         >  SRR4302542.2902784/1‑94 (MQ=60)

                                                       ATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAA                                        >  SRR4302542.1610084/1‑94 (MQ=60)

                                                       ATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAA                                        >  SRR4302542.6395944/1‑94 (MQ=60)

                                                       ATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAA                                        >  SRR4302542.5184425/1‑94 (MQ=60)

                                                        TCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAG                                       <  SRR4302542.4926797/94‑1 (MQ=60)

                                                         CGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGG                                      >  SRR4302542.1082060/1‑94 (MQ=60)

                                                         CGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGG                                      >  SRR4302542.5913627/1‑94 (MQ=60)

                                                         CGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGG                                      <  SRR4302542.4675584/94‑1 (MQ=60)

                                                         CGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGG                                      <  SRR4302542.690332/94‑1 (MQ=60)

                                                          GAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGT                                     <  SRR4302542.693317/94‑1 (MQ=60)

                                                          GAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGT                                     >  SRR4302542.334937/1‑94 (MQ=60)

                                                          GAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGT                                     >  SRR4302542.4734089/1‑94 (MQ=60)

                                                          GAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGT                                     >  SRR4302542.6850463/1‑94 (MQ=60)

                                                          GAGCGTCTGGCACACACCACCAGCGGGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGgaggg                                     >  SRR4302542.2503506/1‑89 (MQ=60)

                                                           AGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTG                                    <  SRR4302542.5627942/94‑1 (MQ=60)

                                                           AGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTG                                    >  SRR4302542.5774883/1‑94 (MQ=60)

                                                           AGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTG                                    <  SRR4302542.2021063/94‑1 (MQ=60)

                                                           AGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTG                                    <  SRR4302542.5089666/94‑1 (MQ=60)

                                                            GCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGG                                   >  SRR4302542.3836851/1‑94 (MQ=60)

                                                            GCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGG                                   >  SRR4302542.6243939/1‑94 (MQ=60)

                                                             CGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGG                                  <  SRR4302542.1470777/94‑1 (MQ=60)

                                                             CGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGG                                  <  SRR4302542.4737504/94‑1 (MQ=60)

                                                              GTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGG                                 <  SRR4302542.5065213/94‑1 (MQ=60)

                                                               TCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGT                                <  SRR4302542.4021486/94‑1 (MQ=60)

                                                               TCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGT                                <  SRR4302542.2474486/94‑1 (MQ=60)

                                                                CTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTT                               >  SRR4302542.281540/1‑94 (MQ=60)

                                                                CTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTT                               <  SRR4302542.3979478/94‑1 (MQ=60)

                                                                CTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTT                               >  SRR4302542.4311296/1‑94 (MQ=60)

                                                                 TGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTA                              >  SRR4302542.819038/1‑94 (MQ=60)

                                                                 TGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTA                              >  SRR4302542.7164109/1‑94 (MQ=60)

                                                                    CACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT                           >  SRR4302542.2660203/1‑94 (MQ=60)

                                                                     ACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑G                         <  SRR4302542.2483699/94‑1 (MQ=60)

                                                                     ACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑G                         >  SRR4302542.5128598/1‑94 (MQ=60)

                                                                       ACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCC                       <  SRR4302542.4478094/94‑1 (MQ=60)

                                                                       ACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCC                       >  SRR4302542.4414730/1‑94 (MQ=60)

                                                                        CACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCT                      <  SRR4302542.5460249/94‑1 (MQ=60)

                                                                        CACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCT                      <  SRR4302542.7318037/94‑1 (MQ=60)

                                                                         ACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTG                     >  SRR4302542.5979679/1‑94 (MQ=60)

                                                                          CCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGA                    >  SRR4302542.4377241/1‑94 (MQ=60)

                                                                           CACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGAT                   >  SRR4302542.5441913/1‑94 (MQ=60)

                                                                           CACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGAT                   <  SRR4302542.6042857/94‑1 (MQ=60)

                                                                            ACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATG                  <  SRR4302542.2767198/94‑1 (MQ=60)

                                                                            ACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATG                  <  SRR4302542.4997964/94‑1 (MQ=60)

                                                                              CAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCG                <  SRR4302542.4439165/94‑1 (MQ=60)

                                                                              CAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCG                >  SRR4302542.4878993/1‑94 (MQ=60)

                                                                                GCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCGCT              <  SRR4302542.4652184/94‑1 (MQ=60)

                                                                                  GTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCGCTAC            >  SRR4302542.7305330/1‑94 (MQ=60)

                                                                                   TGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCGCTACG           >  SRR4302542.1708207/1‑94 (MQ=60)

                                                                                   TGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCGCTACG           >  SRR4302542.1216141/1‑94 (MQ=60)

                                                                                   TGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCGCTACG           <  SRR4302542.5198712/94‑1 (MQ=60)

                                                                                   TGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCGCTACG           <  SRR4302542.401879/94‑1 (MQ=60)

                                                                                    GGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCGCTACGC          >  SRR4302542.3243548/1‑94 (MQ=60)

                                                                                    GGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCGCTACGC          >  SRR4302542.6390323/1‑94 (MQ=60)

                                                                                     GATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCGCTACGCT         <  SRR4302542.1988763/94‑1 (MQ=60)

                                                                                     GATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCGCTACGCT         <  SRR4302542.4552622/94‑1 (MQ=60)

                                                                                      ATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTCGCCTGATGCGCTACGCT         >  SRR4302542.2392750/1‑94 (MQ=60)

                                                                                       TGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCGCTACGCTTA       >  SRR4302542.5854308/1‑94 (MQ=60)

                                                                                       TGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCGCTACGCTTA       >  SRR4302542.2599340/1‑94 (MQ=60)

                                                                                       TGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCGCTACGCTTA       >  SRR4302542.5820469/1‑94 (MQ=60)

                                                                                         AAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCGCTACGCTTATC     >  SRR4302542.7546997/1‑94 (MQ=60)

                                                                                         AAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCGCTACGCTTATC     >  SRR4302542.4257032/1‑94 (MQ=60)

                                                                                           GTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCGCTACGCTTATCAG   <  SRR4302542.2877869/94‑1 (MQ=60)

                                                                                           GCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCGCTACGCTTATCAG   <  SRR4302542.6429566/94‑1 (MQ=60)

                                                                                            CGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCGCTACGCTTATCAGG  <  SRR4302542.7181979/94‑1 (MQ=60)

                                                                                            CGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCGCTACGCTTATCAGG  <  SRR4302542.1736303/94‑1 (MQ=60)

                                                                                            CGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCGCTACGCTTATCAGG  <  SRR4302542.2628789/94‑1 (MQ=60)

CGAGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT‑GCCTGATGCGCTACGCTTATCAGG  >  NC_000913/3771701‑3771886

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`