Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,787,955 A→G W340R (TGG→CGG)  tdh ← threonine dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,787,9550AG85.9% 810.1 / 124.9 340W340R (TGG→CGG) tdhthreonine dehydrogenase
Reads supporting (aligned to +/- strand):  ref base A (23/25);  new base G (140/152);  total (163/177)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.72e-01

Only 100 of 343 total aligned reads displayed.

AACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCG  >  NC_000913/3787863‑3788047
                                                                                            |                                                                                            
aaCTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCa                                                                                              >  2:4855894/1‑93 (MQ=255)
  ctctTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGc                                                                                            <  2:4511599/93‑1 (MQ=255)
  ctctTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGc                                                                                            >  2:3316545/1‑93 (MQ=255)
  ctctTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGc                                                                                            <  1:6076925/93‑1 (MQ=255)
  ctctTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGc                                                                                            <  1:2034011/93‑1 (MQ=255)
     tttATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCa                                                                                         >  1:3464913/1‑93 (MQ=255)
         ttaCACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAAt                                                                                     >  2:4355995/1‑93 (MQ=255)
           acacTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGTATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATaa                                                                                   <  1:7512091/93‑1 (MQ=255)
           acacTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATaa                                                                                   >  1:5918430/1‑93 (MQ=255)
            cacTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAAc                                                                                  >  1:4191173/1‑93 (MQ=255)
            cacTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAAc                                                                                  >  2:6536500/1‑93 (MQ=255)
            cacTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAAc                                                                                  <  1:5206383/93‑1 (MQ=255)
                gACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTc                                                                              >  1:2652980/1‑93 (MQ=255)
                gACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTc                                                                              >  2:2210780/1‑93 (MQ=255)
                gACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTc                                                                              >  1:6672455/1‑93 (MQ=255)
                 aCAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTcc                                                                             <  2:4883999/93‑1 (MQ=255)
                 aCAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTcc                                                                             >  2:3077870/1‑93 (MQ=255)
                  cAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTccc                                                                            <  2:1337892/93‑1 (MQ=255)
                  cAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTccc                                                                            <  1:1816926/93‑1 (MQ=255)
                  cAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTccc                                                                            <  1:7351217/93‑1 (MQ=255)
                     gATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGa                                                                         >  1:6133590/1‑93 (MQ=255)
                       ttttACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACt                                                                       >  2:2598033/1‑93 (MQ=255)
                       ttttACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACt                                                                       >  2:6620947/1‑93 (MQ=255)
                       ttttACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACt                                                                       >  2:1570264/1‑93 (MQ=255)
                       ttttACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACt                                                                       <  1:6802834/93‑1 (MQ=255)
                         ttACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTgg                                                                     <  1:3629853/93‑1 (MQ=255)
                           aCATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGcc                                                                   <  1:4402892/93‑1 (MQ=255)
                            cATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGccc                                                                  <  1:7437465/93‑1 (MQ=255)
                            cATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGccc                                                                  <  2:5758383/93‑1 (MQ=255)
                            cATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGccc                                                                  >  2:6265878/1‑93 (MQ=255)
                             atatTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCg                                                                 >  1:701442/1‑93 (MQ=255)
                             atatTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCg                                                                 >  2:754305/1‑93 (MQ=255)
                              tatTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGa                                                                >  1:3940920/1‑93 (MQ=255)
                                tttAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAAc                                                              >  2:4090994/1‑93 (MQ=255)
                                 ttAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACg                                                             >  2:2855958/1‑93 (MQ=255)
                                 ttAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACg                                                             >  1:2141425/1‑93 (MQ=255)
                                  tAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGc                                                            <  2:496962/93‑1 (MQ=255)
                                     cAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATa                                                         <  2:5281073/93‑1 (MQ=255)
                                       gATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGc                                                       <  2:5107606/93‑1 (MQ=255)
                                          tATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTc                                                    >  2:5434465/1‑93 (MQ=255)
                                            tCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCaa                                                  <  2:4752805/93‑1 (MQ=255)
                                            tCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCaa                                                  <  1:1071766/93‑1 (MQ=255)
                                            tCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCaa                                                  >  2:7414530/1‑93 (MQ=255)
                                             ccTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCaaa                                                 <  2:120230/93‑1 (MQ=255)
                                             ccTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCaaa                                                 <  2:768399/93‑1 (MQ=255)
                                              cTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAg                                                >  2:6914419/1‑93 (MQ=255)
                                               tCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGc                                               <  2:2122305/93‑1 (MQ=255)
                                                 aGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGccc                                             >  2:1504703/1‑93 (MQ=255)
                                                 aGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGccc                                             >  1:2207209/1‑93 (MQ=255)
                                                 aGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGccc                                             >  1:2897531/1‑93 (MQ=255)
                                                  gATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCt                                            <  2:172201/93‑1 (MQ=255)
                                                  gATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCt                                            <  1:808737/93‑1 (MQ=255)
                                                  gATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCt                                            >  1:1723429/1‑93 (MQ=255)
                                                   aTAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCtt                                           >  1:1637258/1‑93 (MQ=255)
                                                   aTAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCtt                                           <  1:2994500/93‑1 (MQ=255)
                                                    tAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTc                                          >  2:498034/1‑93 (MQ=255)
                                                    tAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTc                                          >  2:3578964/1‑93 (MQ=255)
                                                    tAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTc                                          >  2:2933526/1‑93 (MQ=255)
                                                     aaaaGGGCTGGAATACCAGCCCTTGTTCGTTTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCt                                         <  1:3893439/93‑1 (MQ=255)
                                                     aaaaGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCt                                         <  1:5360065/93‑1 (MQ=255)
                                                      aaaGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTg                                        >  2:3172497/1‑93 (MQ=255)
                                                      aaaGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTg                                        >  2:4625185/1‑93 (MQ=255)
                                                          ggCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGaaa                                    >  1:3493842/1‑93 (MQ=255)
                                                           gCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAat                                   >  1:3827956/1‑93 (MQ=255)
                                                            cTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAatc                                  <  2:2728210/93‑1 (MQ=255)
                                                              ggAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAatcat                                >  2:5375041/1‑93 (MQ=255)
                                                              ggAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAatcat                                <  2:5883995/93‑1 (MQ=255)
                                                               gAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAatcatc                               <  2:6338160/93‑1 (MQ=255)
                                                                 aTACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGa                             <  1:5667135/93‑1 (MQ=255)
                                                                 aTACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGa                             <  2:5599110/93‑1 (MQ=255)
                                                                  tACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGAt                            <  1:3103937/93‑1 (MQ=255)
                                                                   aCCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATa                           >  2:4145888/1‑93 (MQ=255)
                                                                     cAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATaga                         <  2:6141384/93‑1 (MQ=255)
                                                                      aGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATagag                        >  1:40222/1‑93 (MQ=255)
                                                                       gCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAgaga                       >  1:6364569/1‑93 (MQ=255)
                                                                       gCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAgaga                       <  1:1279144/93‑1 (MQ=255)
                                                                       gCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAgaga                       <  2:2343980/93‑1 (MQ=255)
                                                                       gCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAgaga                       >  1:3521797/1‑93 (MQ=255)
                                                                       gCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAgaga                       <  1:1911522/93‑1 (MQ=255)
                                                                       gCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAgaga                       >  1:4523207/1‑93 (MQ=255)
                                                                        cccTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGaa                      <  2:3854716/93‑1 (MQ=255)
                                                                         ccTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGaaa                     >  2:7229094/1‑93 (MQ=255)
                                                                           ttGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACg                   >  2:5963955/1‑93 (MQ=255)
                                                                           ttGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACg                   >  2:6081519/1‑93 (MQ=255)
                                                                             gTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGAt                 <  1:6549139/93‑1 (MQ=255)
                                                                              ttCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATg                <  2:3535613/93‑1 (MQ=255)
                                                                              ttCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATg                <  2:5819099/93‑1 (MQ=255)
                                                                               tCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATgg               >  1:6116559/1‑93 (MQ=255)
                                                                               tCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATgg               >  2:1909769/1‑93 (MQ=255)
                                                                               tCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATgg               <  1:4985363/93‑1 (MQ=255)
                                                                                cGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATggg              >  1:1134379/1‑93 (MQ=255)
                                                                                 gtgtTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGt             >  1:6480661/1‑93 (MQ=255)
                                                                                 gtgtTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGt             >  2:1460483/1‑93 (MQ=255)
                                                                                  tgtTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTa            >  2:7117544/1‑93 (MQ=255)
                                                                                   gtTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTaa           <  1:7136016/93‑1 (MQ=255)
                                                                                    ttAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAAt          <  2:4033549/93‑1 (MQ=255)
                                                                                     tAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATg         >  1:3312667/1‑93 (MQ=255)
                                                                                       aTCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGAt       >  2:3774327/1‑93 (MQ=255)
                                                                                        tCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATc      >  1:5079629/1‑93 (MQ=255)
                                                                                        tCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATc      >  1:952032/1‑93 (MQ=255)
                                                                                            |                                                                                            
AACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCG  >  NC_000913/3787863‑3788047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGA  >  NC_000913/3787862‑3788048
                                                                                             |                                                                                             
GAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCA                                                                                               >  SRR4302542.1275778/1‑94 (MQ=60)
 AACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGG                                                                                              >  SRR4302542.4320385/1‑94 (MQ=60)
 AACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAG                                                                                              >  SRR4302542.3275986/1‑94 (MQ=60)
   CTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCT                                                                                            >  SRR4302542.7474971/1‑94 (MQ=60)
   CTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCT                                                                                            <  SRR4302542.6135771/94‑1 (MQ=60)
   CTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCT                                                                                            <  SRR4302542.2051603/94‑1 (MQ=60)
    TCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTC                                                                                           >  SRR4302542.97070/1‑94 (MQ=60)
     CTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCA                                                                                          >  SRR4302542.5296067/1‑94 (MQ=60)
     CTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCA                                                                                          >  SRR4302542.3497363/1‑94 (MQ=60)
     CTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCA                                                                                          >  SRR4302542.3788465/1‑94 (MQ=60)
       TTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGA                                                                                        <  SRR4302542.6518445/94‑1 (MQ=60)
       TTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGA                                                                                        <  SRR4302542.3535704/94‑1 (MQ=60)
         ATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAAT                                                                                      >  SRR4302542.3967227/1‑94 (MQ=60)
          TTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATA                                                                                     <  SRR4302542.7185549/94‑1 (MQ=60)
           TACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAA                                                                                    <  SRR4302542.6909046/94‑1 (MQ=60)
           TACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAA                                                                                    >  SRR4302542.5975786/1‑94 (MQ=60)
            ACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGTATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAAC                                                                                   <  SRR4302542.7585971/94‑1 (MQ=60)
            ACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAAC                                                                                   <  SRR4302542.6701947/94‑1 (MQ=60)
            ACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAAC                                                                                   <  SRR4302542.807948/94‑1 (MQ=60)
            ACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAAC                                                                                   >  SRR4302542.4232502/1‑94 (MQ=60)
             CACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACT                                                                                  <  SRR4302542.6426377/94‑1 (MQ=60)
             CACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACT                                                                                  <  SRR4302542.5257014/94‑1 (MQ=60)
              ACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTT                                                                                 <  SRR4302542.499509/94‑1 (MQ=60)
              ACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTT                                                                                 <  SRR4302542.6582307/94‑1 (MQ=60)
               CTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTT                                                                                >  SRR4302542.3598439/1‑94 (MQ=60)
                TGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTC                                                                               >  SRR4302542.6738189/1‑94 (MQ=60)
                TGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTC                                                                               >  SRR4302542.2678600/1‑94 (MQ=60)
                TGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTC                                                                               <  SRR4302542.1879925/94‑1 (MQ=60)
                TGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTC                                                                               <  SRR4302542.7474027/94‑1 (MQ=60)
                 GACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCC                                                                              >  SRR4302542.5107865/1‑94 (MQ=60)
                 GACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCC                                                                              <  SRR4302542.7223444/94‑1 (MQ=60)
                  ACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCC                                                                             <  SRR4302542.2984765/94‑1 (MQ=60)
                   CAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCG                                                                            <  SRR4302542.5011332/94‑1 (MQ=60)
                   CAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCG                                                                            >  SRR4302542.3974891/1‑94 (MQ=60)
                   CAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCG                                                                            <  SRR4302542.7423207/94‑1 (MQ=60)
                   CAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCG                                                                            <  SRR4302542.1832665/94‑1 (MQ=60)
                   CAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCG                                                                            <  SRR4302542.6886466/94‑1 (MQ=60)
                     GGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGA                                                                          >  SRR4302542.6192932/1‑94 (MQ=60)
                      GATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGAC                                                                         <  SRR4302542.5185745/94‑1 (MQ=60)
                      GATTTTACAAATTTAACAGATTATTCTCAGATAAAAGGGGTGGAATACCAGCCCTTGTTCGTGGTAATCCCGGCTCAGAATAAATTTCCCGGAC                                                                         >  SRR4302542.3688565/1‑94 (MQ=60)
                       ATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACT                                                                        >  SRR4302542.669183/1‑94 (MQ=60)
                       ATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACT                                                                        >  SRR4302542.2957766/1‑94 (MQ=60)
                       ATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACT                                                                        <  SRR4302542.6300554/94‑1 (MQ=60)
                        TTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTG                                                                       <  SRR4302542.6869719/94‑1 (MQ=60)
                         TTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGG                                                                      >  SRR4302542.1100855/1‑94 (MQ=60)
                          TTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGC                                                                     <  SRR4302542.806749/94‑1 (MQ=60)
                          TTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGC                                                                     <  SRR4302542.3663671/94‑1 (MQ=60)
                           TACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCC                                                                    >  SRR4302542.3824910/1‑94 (MQ=60)
                           TACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCC                                                                    <  SRR4302542.7104317/94‑1 (MQ=60)
                            ACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCC                                                                   <  SRR4302542.4446124/94‑1 (MQ=60)
                             CATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCG                                                                  <  SRR4302542.7510261/94‑1 (MQ=60)
                             CATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCG                                                                  >  SRR4302542.707518/1‑94 (MQ=60)
                              ATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGA                                                                 >  SRR4302542.5364557/1‑94 (MQ=60)
                              ATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGA                                                                 <  SRR4302542.5557014/94‑1 (MQ=60)
                              ATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGA                                                                 >  SRR4302542.3979849/1‑94 (MQ=60)
                                ATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAAC                                                               >  SRR4302542.613013/1‑94 (MQ=60)
                                 TTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACG                                                              >  SRR4302542.2159898/1‑94 (MQ=60)
                                  TTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGC                                                             >  SRR4302542.1602594/1‑94 (MQ=60)
                                    AACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCAT                                                           >  SRR4302542.4563292/1‑94 (MQ=60)
                                    AACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCAT                                                           <  SRR4302542.3536595/94‑1 (MQ=60)
                                     ACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATA                                                          >  SRR4302542.2688579/1‑94 (MQ=60)
                                     ACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATA                                                          <  SRR4302542.1508794/94‑1 (MQ=60)
                                     ACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATA                                                          >  SRR4302542.3896729/1‑94 (MQ=60)
                                     ACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATA                                                          >  SRR4302542.2163293/1‑94 (MQ=60)
                                      CAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAG                                                         >  SRR4302542.1794742/1‑94 (MQ=60)
                                      CAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAG                                                         >  SRR4302542.7361450/1‑94 (MQ=60)
                                      CAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAG                                                         <  SRR4302542.6295914/94‑1 (MQ=60)
                                      CAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAG                                                         <  SRR4302542.241088/94‑1 (MQ=60)
                                       AGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGC                                                        <  SRR4302542.6903596/94‑1 (MQ=60)
                                        GATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCG                                                       <  SRR4302542.5207580/94‑1 (MQ=60)
                                          TTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTC                                                     <  SRR4302542.3538755/94‑1 (MQ=60)
                                             TCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAA                                                  <  SRR4302542.1080972/94‑1 (MQ=60)
                                              CCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAG                                                 >  SRR4302542.2829091/1‑94 (MQ=60)
                                              CCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAG                                                 >  SRR4302542.3922518/1‑94 (MQ=60)
                                               CTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGC                                                >  SRR4302542.1434500/1‑94 (MQ=60)
                                               CTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGC                                                >  SRR4302542.7600593/1‑94 (MQ=60)
                                                TCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCC                                               <  SRR4302542.873828/94‑1 (MQ=60)
                                                 CAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAAGGCATAGCGTCAAAGCCC                                              >  SRR4302542.3448814/1‑94 (MQ=60)
                                                 CAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCC                                              >  SRR4302542.2226200/1‑94 (MQ=60)
                                                 CAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCC                                              >  SRR4302542.2443641/1‑94 (MQ=60)
                                                 CAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCC                                              >  SRR4302542.2925336/1‑94 (MQ=60)
                                                  AGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCT                                             <  SRR4302542.6188623/94‑1 (MQ=60)
                                                  AGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCT                                             >  SRR4302542.1738388/1‑94 (MQ=60)
                                                  AGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCT                                             <  SRR4302542.3934196/94‑1 (MQ=60)
                                                  AGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCT                                             <  SRR4302542.4032178/94‑1 (MQ=60)
                                                  AGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCT                                             >  SRR4302542.4882951/1‑94 (MQ=60)
                                                   GATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTT                                            <  SRR4302542.815697/94‑1 (MQ=60)
                                                   GATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTT                                            >  SRR4302542.1651411/1‑94 (MQ=60)
                                                    ATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTC                                           >  SRR4302542.1958595/1‑94 (MQ=60)
                                                    ATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTC                                           <  SRR4302542.3023155/94‑1 (MQ=60)
                                                     TAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCT                                          <  SRR4302542.2961127/94‑1 (MQ=60)
                                                      AAAAGGGCTGGAATACCAGCCCTTGTTCGTTTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTG                                         <  SRR4302542.3931874/94‑1 (MQ=60)
                                                      AAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTG                                         <  SRR4302542.1815659/94‑1 (MQ=60)
                                                      AAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTG                                         <  SRR4302542.2162789/94‑1 (MQ=60)
                                                      AAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTG                                         <  SRR4302542.6747723/94‑1 (MQ=60)
                                                      AAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTG                                         <  SRR4302542.5412159/94‑1 (MQ=60)
                                                      AAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTG                                         >  SRR4302542.5957881/1‑94 (MQ=60)
                                                      AAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTG                                         <  SRR4302542.590902/94‑1 (MQ=60)
                                                       AAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGG                                        >  SRR4302542.3206925/1‑94 (MQ=60)
                                                        AAGGGCTGGAATCCCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGA                                       <  SRR4302542.1695161/94‑1 (MQ=60)
                                                         AGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAA                                      <  SRR4302542.1731211/94‑1 (MQ=60)
                                                          GGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAA                                     >  SRR4302542.3526518/1‑94 (MQ=60)
                                                           GGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAAT                                    <  SRR4302542.1818996/94‑1 (MQ=60)
                                                           GGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAAT                                    >  SRR4302542.3865824/1‑94 (MQ=60)
                                                              TGGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATAAT                                 <  SRR4302542.6779264/94‑1 (MQ=60)
                                                              TGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCAT                                 <  SRR4302542.1861485/94‑1 (MQ=60)
                                                               GGAATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATC                                <  SRR4302542.908079/94‑1 (MQ=60)
                                                                 AATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGA                              <  SRR4302542.7528868/94‑1 (MQ=60)
                                                                 AATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGA                              <  SRR4302542.6483380/94‑1 (MQ=60)
                                                                  ATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGAT                             <  SRR4302542.5722180/94‑1 (MQ=60)
                                                                  ATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGAT                             <  SRR4302542.4042993/94‑1 (MQ=60)
                                                                  ATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGAT                             <  SRR4302542.4081609/94‑1 (MQ=60)
                                                                  ATACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGAT                             <  SRR4302542.5164255/94‑1 (MQ=60)
                                                                   TACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATA                            <  SRR4302542.3133436/94‑1 (MQ=60)
                                                                    ACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAG                           >  SRR4302542.6061589/1‑94 (MQ=60)
                                                                    ACCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCAGGAAATCATCGATAG                           >  SRR4302542.3513065/1‑94 (MQ=60)
                                                                     CCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGA                          >  SRR4302542.961282/1‑94 (MQ=60)
                                                                     CCAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGA                          <  SRR4302542.6610527/94‑1 (MQ=60)
                                                                      CAGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAG                         >  SRR4302542.40578/1‑94 (MQ=60)
                                                                       AGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGA                        >  SRR4302542.6427245/1‑94 (MQ=60)
                                                                       AGCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGA                        >  SRR4302542.3554711/1‑94 (MQ=60)
                                                                       AGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGA                        >  SRR4302542.4567514/1‑94 (MQ=60)
                                                                        GCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAA                       <  SRR4302542.5979253/94‑1 (MQ=60)
                                                                        GCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAA                       <  SRR4302542.7542408/94‑1 (MQ=60)
                                                                        GCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAA                       <  SRR4302542.1928044/94‑1 (MQ=60)
                                                                        GCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAA                       <  SRR4302542.4315555/94‑1 (MQ=60)
                                                                        GCCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAA                       <  SRR4302542.1290156/94‑1 (MQ=60)
                                                                         CCCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAA                      <  SRR4302542.4116992/94‑1 (MQ=60)
                                                                          CCTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAAC                     >  SRR4302542.2132963/1‑94 (MQ=60)
                                                                           CTTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACG                    >  SRR4302542.304553/1‑94 (MQ=60)
                                                                            TTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGA                   <  SRR4302542.3518644/94‑1 (MQ=60)
                                                                            TTGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGA                   >  SRR4302542.198568/1‑94 (MQ=60)
                                                                             TGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGAT                  >  SRR4302542.4401009/1‑94 (MQ=60)
                                                                             TGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGAT                  >  SRR4302542.2345649/1‑94 (MQ=60)
                                                                             TGTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGAT                  <  SRR4302542.3442706/94‑1 (MQ=60)
                                                                              GTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATG                 <  SRR4302542.5780991/94‑1 (MQ=60)
                                                                              GTTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATG                 <  SRR4302542.6613709/94‑1 (MQ=60)
                                                                               TTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGG                >  SRR4302542.6175750/1‑94 (MQ=60)
                                                                               TTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGG                <  SRR4302542.2132053/94‑1 (MQ=60)
                                                                               TTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGG                <  SRR4302542.5105212/94‑1 (MQ=60)
                                                                               TTCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGG                <  SRR4302542.6157282/94‑1 (MQ=60)
                                                                                TCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGG               <  SRR4302542.6157389/94‑1 (MQ=60)
                                                                                TCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGG               <  SRR4302542.4327075/94‑1 (MQ=60)
                                                                                TCGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGG               >  SRR4302542.1144090/1‑94 (MQ=60)
                                                                                TCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGG               <  SRR4302542.5033737/94‑1 (MQ=60)
                                                                                 CGTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGT              <  SRR4302542.1091670/94‑1 (MQ=60)
                                                                                 CGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGT              >  SRR4302542.6544510/1‑94 (MQ=60)
                                                                                  GTGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTA             >  SRR4302542.6186445/1‑94 (MQ=60)
                                                                                   TGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAA            >  SRR4302542.1273725/1‑94 (MQ=60)
                                                                                   TGTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAA            >  SRR4302542.455558/1‑94 (MQ=60)
                                                                                    GTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAAT           <  SRR4302542.7206043/94‑1 (MQ=60)
                                                                                    GTTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAAT           <  SRR4302542.3025858/94‑1 (MQ=60)
                                                                                     TTAATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATG          >  SRR4302542.3343893/1‑94 (MQ=60)
                                                                                     TTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATG          <  SRR4302542.1987474/94‑1 (MQ=60)
                                                                                       AATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGAT        <  SRR4302542.6662215/94‑1 (MQ=60)
                                                                                       AATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGAT        <  SRR4302542.5629349/94‑1 (MQ=60)
                                                                                        ATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATC       >  SRR4302542.5128996/1‑94 (MQ=60)
                                                                                        ATCCCGGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATC       >  SRR4302542.960207/1‑94 (MQ=60)
                                                                                          CCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGG     <  SRR4302542.3205053/94‑1 (MQ=60)
                                                                                          CCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGG     >  SRR4302542.7387858/1‑94 (MQ=60)
                                                                                             AGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGA  <  SRR4302542.3624997/94‑1 (MQ=60)
                                                                                             |                                                                                             
GAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGA  >  NC_000913/3787862‑3788048

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑