Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,788,398 A→G V192A (GTG→GCG)  tdh ← threonine dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,788,3980AG83.2% 642.0 / 114.5 298V192A (GTG→GCG) tdhthreonine dehydrogenase
Reads supporting (aligned to +/- strand):  ref base A (24/26);  new base G (128/119);  total (152/146)
Fisher's exact test for biased strand distribution p-value = 6.45e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.25e-01

Only 100 of 315 total aligned reads displayed.

CGTCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGA  >  NC_000913/3788306‑3788490
                                                                                            |                                                                                            
  tCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATcacc                                                                                            >  2:608722/1‑93 (MQ=255)
   cATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATcgcca                                                                                           <  2:4202600/93‑1 (MQ=255)
   cATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATcacca                                                                                           <  1:5716030/93‑1 (MQ=255)
    aTTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATcgccac                                                                                          >  2:1513301/1‑93 (MQ=255)
    aTTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATcgccac                                                                                          >  1:3783982/1‑93 (MQ=255)
    aTTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATcaccac                                                                                          >  2:1617882/1‑93 (MQ=255)
     ttGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCcaca                                                                                         >  1:7034845/1‑93 (MQ=255)
      tGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACAt                                                                                        <  2:5522435/93‑1 (MQ=255)
      tGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACAt                                                                                        <  2:6480037/93‑1 (MQ=255)
      tGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACAt                                                                                        <  1:1615340/93‑1 (MQ=255)
      tGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACAt                                                                                        >  1:1815015/1‑93 (MQ=255)
      tGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACAt                                                                                        <  1:5113136/93‑1 (MQ=255)
      tGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACAt                                                                                        >  2:6634015/1‑93 (MQ=255)
       nngaTTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACAtt                                                                                       <  2:1384876/91‑1 (MQ=255)
       gagaTTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACAtt                                                                                       >  1:3546036/1‑93 (MQ=255)
       gagaTTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACAtt                                                                                       <  1:847059/93‑1 (MQ=255)
       gagaTTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACAtt                                                                                       <  1:4091358/93‑1 (MQ=255)
         gaTTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGc                                                                                     <  1:6399371/93‑1 (MQ=255)
           ttttCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGTTCGCCACATTGCGt                                                                                   <  2:3182121/93‑1 (MQ=255)
            tttCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTg                                                                                  >  2:1105827/1‑93 (MQ=255)
             ttCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGc                                                                                 >  1:5523595/1‑93 (MQ=255)
               cTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCAc                                                                               >  2:2352453/1‑93 (MQ=255)
               cTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCAc                                                                               <  1:2241878/93‑1 (MQ=255)
                  tGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCaa                                                                            <  2:5300097/93‑1 (MQ=255)
                    gCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACg                                                                          >  1:7482341/1‑93 (MQ=255)
                      gACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACgtg                                                                        <  1:3658639/93‑1 (MQ=255)
                       aCGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACgtgt                                                                       <  1:4212097/93‑1 (MQ=255)
                       aCGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACgtgt                                                                       >  1:5460416/1‑93 (MQ=255)
                        cGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGtt                                                                      >  1:6388971/1‑93 (MQ=255)
                        cGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGtt                                                                      >  1:1958982/1‑93 (MQ=255)
                         gTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGttt                                                                     >  1:6527640/1‑93 (MQ=255)
                          ttAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTc                                                                    >  1:1286931/1‑93 (MQ=255)
                               cGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCAc                                                               <  2:2478064/93‑1 (MQ=255)
                                gCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCAcc                                                              >  2:4440444/1‑93 (MQ=255)
                                 cACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCAccg                                                             >  2:3504066/1‑93 (MQ=255)
                                  aCGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCAccgc                                                            >  1:4797288/1‑93 (MQ=255)
                                    gggTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCAccgccg                                                          >  1:6280017/1‑93 (MQ=255)
                                    gggTGATACCCATTCTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCAccgccg                                                          >  2:6443256/1‑93 (MQ=255)
                                          tACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCa                                                    >  2:5151144/1‑93 (MQ=255)
                                          tACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCa                                                    >  1:4240870/1‑93 (MQ=255)
                                          tACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACTTGTTTCGCCCCCGCCGCTGCCa                                                    <  1:461981/93‑1 (MQ=255)
                                           aCCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCat                                                   <  1:4985528/93‑1 (MQ=255)
                                           aCCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCat                                                   >  1:445837/1‑93 (MQ=255)
                                           aCCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCat                                                   >  2:3972693/1‑93 (MQ=255)
                                            cccATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCata                                                  >  1:6581594/1‑93 (MQ=255)
                                             ccATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCataa                                                 >  1:2116249/1‑93 (MQ=255)
                                             ccATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCataa                                                 <  1:3848989/93‑1 (MQ=255)
                                               aTTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGTACCAACGTGTTTCGCCACCGCCGCTGCCataata                                               <  2:5107036/93‑1 (MQ=255)
                                               aTTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCataata                                               <  2:365659/93‑1 (MQ=255)
                                                ttttACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATAc                                              >  2:740430/1‑93 (MQ=255)
                                                   tACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCaa                                           <  1:4693020/93‑1 (MQ=255)
                                                     cgcgCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATc                                         <  1:3177918/93‑1 (MQ=255)
                                                     cgcgCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATc                                         <  2:6786483/93‑1 (MQ=255)
                                                        gcCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCggg                                      >  2:2213376/1‑93 (MQ=255)
                                                        gcCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCggg                                      >  1:966183/1‑93 (MQ=255)
                                                        gcCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCggg                                      >  1:6311741/1‑93 (MQ=255)
                                                        gcCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCggg                                      >  1:4547449/1‑93 (MQ=255)
                                                         ccAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGc                                     <  2:52250/93‑1 (MQ=255)
                                                         ccAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGc                                     >  1:3278075/1‑93 (MQ=255)
                                                          cAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGcc                                    <  2:7468242/93‑1 (MQ=255)
                                                          cAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGcc                                    >  1:3906173/1‑93 (MQ=255)
                                                             cTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGc                                 <  1:6458027/93‑1 (MQ=255)
                                                             cTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGc                                 >  1:1132821/1‑93 (MQ=255)
                                                              tCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCa                                >  1:6909484/1‑93 (MQ=255)
                                                               cAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCAc                               <  1:1046956/93‑1 (MQ=255)
                                                                aaGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCAcc                              >  2:5964030/1‑93 (MQ=255)
                                                                aaGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCAcc                              >  1:108150/1‑93 (MQ=255)
                                                                aaGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCAcc                              >  1:6153852/1‑93 (MQ=255)
                                                                 aGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCa                             <  2:65540/93‑1 (MQ=255)
                                                                 aGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCa                             >  2:1058307/1‑93 (MQ=255)
                                                                     ggTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGaaa                         >  2:1856547/1‑93 (MQ=255)
                                                                      gTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAAc                        <  2:6155760/93‑1 (MQ=255)
                                                                      gTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAAc                        >  1:682695/1‑93 (MQ=255)
                                                                       tATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAAcc                       >  2:3750025/1‑93 (MQ=255)
                                                                       tATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAAcc                       >  1:2779357/1‑93 (MQ=255)
                                                                       tATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAAcc                       >  2:2095156/1‑93 (MQ=255)
                                                                        aTTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCa                      <  1:4839450/93‑1 (MQ=255)
                                                                        aTTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCa                      <  1:624780/93‑1 (MQ=255)
                                                                        aTTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCa                      >  2:4687703/1‑93 (MQ=255)
                                                                         ttCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAg                     <  2:7287621/93‑1 (MQ=255)
                                                                         ttCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAg                     <  1:6054510/93‑1 (MQ=255)
                                                                          tCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGc                    <  2:6194881/93‑1 (MQ=255)
                                                                           cGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGca                   <  2:7043480/93‑1 (MQ=255)
                                                                             ttAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGcaca                 >  2:845586/1‑93 (MQ=255)
                                                                             ttAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGcaca                 <  2:711967/93‑1 (MQ=255)
                                                                              tAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACAt                >  1:2522814/1‑93 (MQ=255)
                                                                               aaCATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATc               <  1:5954114/93‑1 (MQ=255)
                                                                               aaCATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATc               <  1:4914181/93‑1 (MQ=255)
                                                                                aCATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCt              >  2:4966720/1‑93 (MQ=255)
                                                                                aCATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCt              <  1:721629/93‑1 (MQ=255)
                                                                                  aTCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTc            <  2:2942017/93‑1 (MQ=255)
                                                                                  aTCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTc            >  2:2015650/1‑93 (MQ=255)
                                                                                  aTCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTc            <  1:6655193/93‑1 (MQ=255)
                                                                                  aTCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTc            <  1:7308905/93‑1 (MQ=255)
                                                                                      gTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGccc        >  2:4305888/1‑93 (MQ=255)
                                                                                      gTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGccc        >  1:5346866/1‑93 (MQ=255)
                                                                                       tGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCcca       >  2:4167892/1‑93 (MQ=255)
                                                                                       tGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCcca       >  2:329586/1‑93 (MQ=255)
                                                                                       tGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCcca       >  2:261509/1‑93 (MQ=255)
                                                                                            accacATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGa  >  1:1444167/1‑93 (MQ=255)
                                                                                            |                                                                                            
CGTCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGA  >  NC_000913/3788306‑3788490

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CGTCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGAT  >  NC_000913/3788306‑3788491
                                                                                            |                                                                                             
CGTCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGC                                                                                              >  SRR4302542.42137/1‑94 (MQ=60)
CGTCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCAC                                                                                              <  SRR4302542.1082128/94‑1 (MQ=60)
  TCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCA                                                                                            <  SRR4302542.449496/94‑1 (MQ=60)
  TCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCA                                                                                            >  SRR4302542.4596216/1‑94 (MQ=60)
  TCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCA                                                                                            >  SRR4302542.1578597/1‑94 (MQ=60)
   CATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCAC                                                                                           >  SRR4302542.4181686/1‑94 (MQ=60)
   CATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCAC                                                                                           >  SRR4302542.3821413/1‑94 (MQ=60)
   CATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCAC                                                                                           >  SRR4302542.495566/1‑94 (MQ=60)
   CATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCAC                                                                                           <  SRR4302542.5771508/94‑1 (MQ=60)
   CATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGGATTCGTTAACATCAGTGATCGCCAC                                                                                           >  SRR4302542.6467670/1‑94 (MQ=60)
    ATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACA                                                                                          >  SRR4302542.1297542/1‑94 (MQ=60)
    ATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACA                                                                                          >  SRR4302542.7103955/1‑94 (MQ=60)
     TTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACAT                                                                                         <  SRR4302542.636337/94‑1 (MQ=60)
     TTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACAT                                                                                         >  SRR4302542.1830737/1‑94 (MQ=60)
      TGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATT                                                                                        <  SRR4302542.5162794/94‑1 (MQ=60)
      TGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATT                                                                                        <  SRR4302542.1629294/94‑1 (MQ=60)
      TGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATT                                                                                        >  SRR4302542.3579189/1‑94 (MQ=60)
       GAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTG                                                                                       <  SRR4302542.4131712/94‑1 (MQ=60)
       GAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTG                                                                                       <  SRR4302542.3083904/94‑1 (MQ=60)
       GAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTG                                                                                       <  SRR4302542.854359/94‑1 (MQ=60)
       GAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTG                                                                                       >  SRR4302542.4697516/1‑94 (MQ=60)
         GATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCG                                                                                     <  SRR4302542.4260172/94‑1 (MQ=60)
         GATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCG                                                                                     <  SRR4302542.2741302/94‑1 (MQ=60)
         GATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCG                                                                                     <  SRR4302542.6462426/94‑1 (MQ=60)
           TTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTG                                                                                   >  SRR4302542.1074126/1‑94 (MQ=60)
           TTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTG                                                                                   <  SRR4302542.7337262/94‑1 (MQ=60)
           TTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTG                                                                                   <  SRR4302542.7337263/94‑1 (MQ=60)
           TTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTG                                                                                   <  SRR4302542.1790298/94‑1 (MQ=60)
            TTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGC                                                                                  >  SRR4302542.5577281/1‑94 (MQ=60)
            TTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGC                                                                                  >  SRR4302542.64485/1‑94 (MQ=60)
             TTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCA                                                                                 >  SRR4302542.928912/1‑94 (MQ=60)
             TTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCA                                                                                 <  SRR4302542.6318036/94‑1 (MQ=60)
              TCTTTTGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCAC                                                                                >  SRR4302542.6362487/1‑94 (MQ=60)
              TCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCAC                                                                                <  SRR4302542.7479182/94‑1 (MQ=60)
               CTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACC                                                                               <  SRR4302542.2261156/94‑1 (MQ=60)
                TTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCA                                                                              >  SRR4302542.4264300/1‑94 (MQ=60)
                 TTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAA                                                                             >  SRR4302542.1377980/1‑94 (MQ=60)
                   GGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACG                                                                           >  SRR4302542.6396500/1‑94 (MQ=60)
                   GGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACG                                                                           >  SRR4302542.4848492/1‑94 (MQ=60)
                   GGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACG                                                                           >  SRR4302542.7555694/1‑94 (MQ=60)
                     CGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTG                                                                         >  SRR4302542.7520463/1‑94 (MQ=60)
                     CGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTG                                                                         >  SRR4302542.5657970/1‑94 (MQ=60)
                     CGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTG                                                                         <  SRR4302542.2285887/94‑1 (MQ=60)
                      GACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGT                                                                        >  SRR4302542.7248059/1‑94 (MQ=60)
                      GACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGT                                                                        <  SRR4302542.3693047/94‑1 (MQ=60)
                      GACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGT                                                                        >  SRR4302542.5513464/1‑94 (MQ=60)
                       ACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTT                                                                       >  SRR4302542.6451913/1‑94 (MQ=60)
                       ACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTT                                                                       <  SRR4302542.4253607/94‑1 (MQ=60)
                       ACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTT                                                                       >  SRR4302542.1975926/1‑94 (MQ=60)
                        CGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTT                                                                      >  SRR4302542.5359026/1‑94 (MQ=60)
                        CGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTT                                                                      >  SRR4302542.6591968/1‑94 (MQ=60)
                         GTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTC                                                                     >  SRR4302542.7195603/1‑94 (MQ=60)
                         GTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTC                                                                     <  SRR4302542.5120586/94‑1 (MQ=60)
                         GTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTC                                                                     <  SRR4302542.6647038/94‑1 (MQ=60)
                         GTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTC                                                                     >  SRR4302542.6394872/1‑94 (MQ=60)
                         GTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTC                                                                     >  SRR4302542.1298015/1‑94 (MQ=60)
                          TTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCG                                                                    <  SRR4302542.1350018/94‑1 (MQ=60)
                          TTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCG                                                                    <  SRR4302542.4842680/94‑1 (MQ=60)
                          TTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCG                                                                    <  SRR4302542.6587833/94‑1 (MQ=60)
                          TTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCG                                                                    <  SRR4302542.926291/94‑1 (MQ=60)
                             ACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCA                                                                 >  SRR4302542.1134270/1‑94 (MQ=60)
                               CGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACC                                                               >  SRR4302542.2190515/1‑94 (MQ=60)
                               CGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACC                                                               >  SRR4302542.6637385/1‑94 (MQ=60)
                               CGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACC                                                               <  SRR4302542.1918443/94‑1 (MQ=60)
                               CGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACC                                                               <  SRR4302542.6879379/94‑1 (MQ=60)
                                 CACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGC                                                             >  SRR4302542.4844026/1‑94 (MQ=60)
                                  ACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCC                                                            >  SRR4302542.6165636/1‑94 (MQ=60)
                                  ACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCC                                                            <  SRR4302542.6960903/94‑1 (MQ=60)
                                  ACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCC                                                            <  SRR4302542.6468553/94‑1 (MQ=60)
                                   CGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCG                                                           >  SRR4302542.6341901/1‑94 (MQ=60)
                                    GGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGC                                                          >  SRR4302542.5633174/1‑94 (MQ=60)
                                     GGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCT                                                         <  SRR4302542.1138544/94‑1 (MQ=60)
                                       TGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGC                                                       >  SRR4302542.3667816/1‑94 (MQ=60)
                                        GATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCC                                                      <  SRR4302542.2143138/94‑1 (MQ=60)
                                         ATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCA                                                     >  SRR4302542.4186451/1‑94 (MQ=60)
                                         ATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCA                                                     >  SRR4302542.550892/1‑94 (MQ=60)
                                         ATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCA                                                     >  SRR4302542.7588627/1‑94 (MQ=60)
                                         ATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCA                                                     >  SRR4302542.4282671/1‑94 (MQ=60)
                                          TACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCAT                                                    <  SRR4302542.6452505/94‑1 (MQ=60)
                                          TACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCAT                                                    >  SRR4302542.449693/1‑94 (MQ=60)
                                          TACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACTTGTTTCGCCCCCGCCGCTGCCAT                                                    <  SRR4302542.465981/94‑1 (MQ=60)
                                          TACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCAT                                                    <  SRR4302542.1903288/94‑1 (MQ=60)
                                          TACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCAT                                                    <  SRR4302542.3927639/94‑1 (MQ=60)
                                           ACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATA                                                   >  SRR4302542.6646440/1‑94 (MQ=60)
                                           ACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATA                                                   <  SRR4302542.5033904/94‑1 (MQ=60)
                                           ACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATA                                                   <  SRR4302542.6259740/94‑1 (MQ=60)
                                           ACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATA                                                   >  SRR4302542.3058854/1‑94 (MQ=60)
                                            CCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAA                                                  >  SRR4302542.2134514/1‑94 (MQ=60)
                                             CCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCGGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCGCCGCCGCTGCCATAAT                                                 <  SRR4302542.6010748/94‑1 (MQ=60)
                                             CCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAAT                                                 <  SRR4302542.3925297/94‑1 (MQ=60)
                                             CCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAAT                                                 <  SRR4302542.3887020/94‑1 (MQ=60)
                                              CATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATA                                                >  SRR4302542.671916/1‑94 (MQ=60)
                                              CATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATA                                                <  SRR4302542.3834318/94‑1 (MQ=60)
                                               ATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATAC                                               >  SRR4302542.3391062/1‑94 (MQ=60)
                                               ATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATAC                                               >  SRR4302542.3212020/1‑94 (MQ=60)
                                               ATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATAC                                               <  SRR4302542.5768463/94‑1 (MQ=60)
                                                TTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGGGTGCACCAACGTTTTTCGCCCCCGCCGCTGCCATAATACC                                              <  SRR4302542.4075825/94‑1 (MQ=60)
                                                TTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACC                                              <  SRR4302542.5976754/94‑1 (MQ=60)
                                                TTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACC                                              <  SRR4302542.4599807/94‑1 (MQ=60)
                                                TTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACC                                              >  SRR4302542.3604892/1‑94 (MQ=60)
                                                 TTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCA                                             <  SRR4302542.4299170/94‑1 (MQ=60)
                                                   TACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAAT                                           <  SRR4302542.673736/94‑1 (MQ=60)
                                                   TACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAAT                                           <  SRR4302542.841926/94‑1 (MQ=60)
                                                   TACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAAT                                           <  SRR4302542.4738842/94‑1 (MQ=60)
                                                     CGCGCCAGCTGAAGGCGGTTTTCGTTAACATCAGTGATCACCACATTGCGTGCACCAGCGTGTTTCGCCACCGCCGCTGCCATAATACCAATCG                                         <  SRR4302542.5038985/94‑1 (MQ=60)
                                                     CGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCG                                         <  SRR4302542.3208036/94‑1 (MQ=60)
                                                     CGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCG                                         <  SRR4302542.5441711/94‑1 (MQ=60)
                                                       CGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGG                                       >  SRR4302542.6373928/1‑94 (MQ=60)
                                                       CGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGG                                       <  SRR4302542.664079/94‑1 (MQ=60)
                                                       CGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGG                                       >  SRR4302542.1146763/1‑94 (MQ=60)
                                                       CGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGG                                       >  SRR4302542.974478/1‑94 (MQ=60)
                                                       CGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGG                                       >  SRR4302542.4591959/1‑94 (MQ=60)
                                                        GCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGC                                      >  SRR4302542.3309008/1‑94 (MQ=60)
                                                         CCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCC                                     >  SRR4302542.3944735/1‑94 (MQ=60)
                                                         CCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCC                                     <  SRR4302542.6078871/94‑1 (MQ=60)
                                                           AGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTG                                   >  SRR4302542.2421157/1‑94 (MQ=60)
                                                            GCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGC                                  >  SRR4302542.6318397/1‑94 (MQ=60)
                                                            GCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGC                                  >  SRR4302542.1142517/1‑94 (MQ=60)
                                                             CTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCA                                 >  SRR4302542.4521674/1‑94 (MQ=60)
                                                             CTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCA                                 >  SRR4302542.3380979/1‑94 (MQ=60)
                                                             CTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCA                                 <  SRR4302542.6521613/94‑1 (MQ=60)
                                                             CTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCA                                 >  SRR4302542.3789218/1‑94 (MQ=60)
                                                             CTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCA                                 >  SRR4302542.6977319/1‑94 (MQ=60)
                                                             CTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCA                                 >  SRR4302542.2009144/1‑94 (MQ=60)
                                                               CAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACC                               >  SRR4302542.6213435/1‑94 (MQ=60)
                                                               CAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACC                               <  SRR4302542.1055939/94‑1 (MQ=60)
                                                               CAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACC                               >  SRR4302542.4997103/1‑94 (MQ=60)
                                                               CAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACC                               >  SRR4302542.109035/1‑94 (MQ=60)
                                                               CAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACC                               >  SRR4302542.1733677/1‑94 (MQ=60)
                                                                 AGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAG                             <  SRR4302542.3571268/94‑1 (MQ=60)
                                                                 AGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAG                             >  SRR4302542.6345344/1‑94 (MQ=60)
                                                                 AGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAG                             >  SRR4302542.4866886/1‑94 (MQ=60)
                                                                    CGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAA                          >  SRR4302542.3874122/1‑94 (MQ=60)
                                                                    CGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAA                          <  SRR4302542.3256067/94‑1 (MQ=60)
                                                                     GGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAAC                         >  SRR4302542.688589/1‑94 (MQ=60)
                                                                      GTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACC                        <  SRR4302542.5522536/94‑1 (MQ=60)
                                                                      GTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACC                        >  SRR4302542.884512/1‑94 (MQ=60)
                                                                      GTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACC                        >  SRR4302542.2806123/1‑94 (MQ=60)
                                                                       TATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCA                       >  SRR4302542.6303383/1‑94 (MQ=60)
                                                                       TATTCGTTAACATCAGTGATCGCCACATTGCGGGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCA                       >  SRR4302542.4536036/1‑94 (MQ=60)
                                                                       TATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCA                       >  SRR4302542.53061/1‑94 (MQ=60)
                                                                        ATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAG                      >  SRR4302542.4038112/1‑94 (MQ=60)
                                                                        ATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAG                      <  SRR4302542.630158/94‑1 (MQ=60)
                                                                        ATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAG                      <  SRR4302542.2554989/94‑1 (MQ=60)
                                                                        ATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAG                      <  SRR4302542.4886590/94‑1 (MQ=60)
                                                                        ATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAG                      >  SRR4302542.6563186/1‑94 (MQ=60)
                                                                        AGTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAG                      >  SRR4302542.4916501/1‑94 (MQ=60)
                                                                         TTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGC                     <  SRR4302542.7033024/94‑1 (MQ=60)
                                                                         TTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGC                     <  SRR4302542.6113116/94‑1 (MQ=60)
                                                                           CGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCAC                   >  SRR4302542.6928415/1‑94 (MQ=60)
                                                                            GTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACA                  >  SRR4302542.2050967/1‑94 (MQ=60)
                                                                            GTGAACACCAGTGATCGCCACATGGCGGGCACAAACGGGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACA                  <  SRR4302542.1884353/94‑1 (MQ=60)
                                                                             TTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACAT                 >  SRR4302542.2547279/1‑94 (MQ=60)
                                                                               AACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCT               <  SRR4302542.6616968/94‑1 (MQ=60)
                                                                               AACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCT               <  SRR4302542.6011776/94‑1 (MQ=60)
                                                                               AACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCT               <  SRR4302542.4961972/94‑1 (MQ=60)
                                                                                ACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTT              <  SRR4302542.727846/94‑1 (MQ=60)
                                                                                ACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTT              <  SRR4302542.6183523/94‑1 (MQ=60)
                                                                                 CATCAGTGATCCCCACTTTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTC             <  SRR4302542.4793060/94‑1 (MQ=60)
                                                                                  ATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCG            >  SRR4302542.6029779/1‑94 (MQ=60)
                                                                                  ATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCG            >  SRR4302542.4709585/1‑94 (MQ=60)
                                                                                  ATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCG            <  SRR4302542.6720767/94‑1 (MQ=60)
                                                                                  ATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCG            <  SRR4302542.1465272/94‑1 (MQ=60)
                                                                                  ATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCG            <  SRR4302542.4158270/94‑1 (MQ=60)
                                                                                  ATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCG            >  SRR4302542.4872355/1‑94 (MQ=60)
                                                                                  ATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCG            <  SRR4302542.7380498/94‑1 (MQ=60)
                                                                                    CAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCC          >  SRR4302542.3741393/1‑94 (MQ=60)
                                                                                     AGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCC         >  SRR4302542.5398804/1‑94 (MQ=60)
                                                                                     AGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCC         <  SRR4302542.7072954/94‑1 (MQ=60)
                                                                                         ATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCA     >  SRR4302542.6744218/1‑94 (MQ=60)
                                                                                         ATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCA     >  SRR4302542.6721708/1‑94 (MQ=60)
                                                                                         ATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCA     >  SRR4302542.7197571/1‑94 (MQ=60)
                                                                                          TCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAG    <  SRR4302542.4006223/94‑1 (MQ=60)
                                                                                          TCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAG    <  SRR4302542.7291639/94‑1 (MQ=60)
                                                                                          TCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAG    <  SRR4302542.5094211/94‑1 (MQ=60)
                                                                                           CGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGA   >  SRR4302542.4291242/1‑94 (MQ=60)
                                                                                           CGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGA   >  SRR4302542.22360/1‑94 (MQ=60)
                                                                                           CACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGA   >  SRR4302542.1456633/1‑94 (MQ=60)
                                                                                           CACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGA   >  SRR4302542.49680/1‑94 (MQ=60)
                                                                                           CACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGA   >  SRR4302542.5443503/1‑94 (MQ=60)
                                                                                            GCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGAT  >  SRR4302542.7272071/1‑94 (MQ=60)
                                                                                            GCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGAT  >  SRR4302542.845612/1‑94 (MQ=60)
                                                                                            GCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGAT  <  SRR4302542.4873768/94‑1 (MQ=60)
                                                                                            GCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGAT  >  SRR4302542.5282499/1‑94 (MQ=60)
                                                                                            |                                                                                             
CGTCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGAT  >  NC_000913/3788306‑3788491

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑