Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGAATACGCGCC > NC_000913/3788901‑3789087
|
CCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACG < SRR4302542.2111519/94‑1 (MQ=60)
CCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACG > SRR4302542.4982821/1‑94 (MQ=60)
CCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGC > SRR4302542.4262845/1‑94 (MQ=60)
CCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACAC > SRR4302542.19973/1‑94 (MQ=60)
CCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACAC < SRR4302542.4649250/94‑1 (MQ=60)
CGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACC < SRR4302542.7382555/94‑1 (MQ=60)
AGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCA < SRR4302542.6048322/94‑1 (MQ=60)
AGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCA > SRR4302542.2617218/1‑94 (MQ=60)
GTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAG < SRR4302542.1401597/94‑1 (MQ=60)
GTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAG > SRR4302542.7171509/1‑94 (MQ=60)
TCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTT < SRR4302542.2604356/94‑1 (MQ=60)
CCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTG < SRR4302542.1816246/94‑1 (MQ=60)
CCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTG < SRR4302542.1311484/94‑1 (MQ=60)
CCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTG > SRR4302542.7342718/1‑94 (MQ=60)
CGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGT < SRR4302542.205118/94‑1 (MQ=60)
CGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGT < SRR4302542.4531707/94‑1 (MQ=60)
GGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCCGGCGATAACACCCAGTTGTT > SRR4302542.4138180/1‑94 (MQ=60)
GTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTT < SRR4302542.2267180/94‑1 (MQ=60)
GTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTT > SRR4302542.5060284/1‑94 (MQ=60)
ACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTAC < SRR4302542.1695578/94‑1 (MQ=60)
ACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTAC > SRR4302542.4085778/1‑94 (MQ=60)
ACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTAC < SRR4302542.2531988/94‑1 (MQ=60)
AGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCA > SRR4302542.6960232/1‑94 (MQ=60)
AGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCA > SRR4302542.7393241/1‑94 (MQ=60)
AGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCA > SRR4302542.1248190/1‑94 (MQ=60)
AGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCA > SRR4302542.1973480/1‑94 (MQ=60)
AGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCA > SRR4302542.4947228/1‑94 (MQ=60)
GAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAAT > SRR4302542.3221199/1‑94 (MQ=60)
AACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATA < SRR4302542.2550399/94‑1 (MQ=60)
AACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATA < SRR4302542.2224149/94‑1 (MQ=60)
AACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATA < SRR4302542.2902847/94‑1 (MQ=60)
ACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATAC < SRR4302542.6592353/94‑1 (MQ=60)
GTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGC > SRR4302542.826352/1‑94 (MQ=60)
TCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCG < SRR4302542.4976088/94‑1 (MQ=60)
TCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCG < SRR4302542.6699278/94‑1 (MQ=60)
CGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGT < SRR4302542.5166483/94‑1 (MQ=60)
CGGTCATCCAGATCCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACACCCTCAGGCGATAACACCCAGTTTTTTACCAATACGCGT < SRR4302542.2135895/94‑1 (MQ=60)
GGTCATCCAGATGCCCTGTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTA > SRR4302542.3502926/1‑94 (MQ=60)
GGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTA > SRR4302542.4432248/1‑94 (MQ=60)
TCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAA < SRR4302542.2743316/94‑1 (MQ=60)
CATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAAT < SRR4302542.94558/94‑1 (MQ=60)
CATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAAT < SRR4302542.3904514/94‑1 (MQ=60)
CATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAAT < SRR4302542.5113428/94‑1 (MQ=60)
CATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAAT < SRR4302542.509457/94‑1 (MQ=60)
CATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAAT < SRR4302542.7286594/94‑1 (MQ=60)
ATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATG > SRR4302542.703880/1‑94 (MQ=60)
CCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCT > SRR4302542.1984542/1‑94 (MQ=60)
CCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCT > SRR4302542.5176424/1‑94 (MQ=60)
CCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCT > SRR4302542.4628093/1‑94 (MQ=60)
CAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTT < SRR4302542.4947184/94‑1 (MQ=60)
CAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTT < SRR4302542.3948304/94‑1 (MQ=60)
AGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTC > SRR4302542.5258717/1‑94 (MQ=60)
GATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCT < SRR4302542.5428321/94‑1 (MQ=60)
GATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCT < SRR4302542.2467986/94‑1 (MQ=60)
GATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCT > SRR4302542.1465648/1‑94 (MQ=60)
ATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTA > SRR4302542.5806829/1‑94 (MQ=60)
GCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACT < SRR4302542.1499608/94‑1 (MQ=60)
GCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACT > SRR4302542.7219319/1‑94 (MQ=60)
GCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACT < SRR4302542.3168557/94‑1 (MQ=60)
GCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACT < SRR4302542.181699/94‑1 (MQ=60)
GCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACT < SRR4302542.7552045/94‑1 (MQ=60)
GCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACT < SRR4302542.2370199/94‑1 (MQ=60)
CCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTG < SRR4302542.7225453/94‑1 (MQ=60)
CCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTG < SRR4302542.1745610/94‑1 (MQ=60)
CCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATAGGCGTAAATGCTTCTACTG < SRR4302542.5975082/94‑1 (MQ=60)
CCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTG < SRR4302542.2982365/94‑1 (MQ=60)
CCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGC > SRR4302542.2935502/1‑94 (MQ=60)
CTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCA > SRR4302542.7045912/1‑94 (MQ=60)
CTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCA > SRR4302542.1628412/1‑94 (MQ=60)
TCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCAC < SRR4302542.519046/94‑1 (MQ=60)
TCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCAC > SRR4302542.1303647/1‑94 (MQ=60)
CTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACG < SRR4302542.4458640/94‑1 (MQ=60)
CTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACG < SRR4302542.5613144/94‑1 (MQ=60)
TCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCG < SRR4302542.2995156/94‑1 (MQ=60)
CGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTA > SRR4302542.3208606/1‑94 (MQ=60)
GCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAA < SRR4302542.158861/94‑1 (MQ=60)
GCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAA > SRR4302542.2283928/1‑94 (MQ=60)
CTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAAT < SRR4302542.3652393/94‑1 (MQ=60)
CTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAAT < SRR4302542.2959407/94‑1 (MQ=60)
CTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAAT > SRR4302542.4472677/1‑94 (MQ=60)
CTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAAT < SRR4302542.2655002/94‑1 (MQ=60)
CTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAAT > SRR4302542.4312088/1‑94 (MQ=60)
CTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAAT > SRR4302542.876883/1‑94 (MQ=60)
CTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAATTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAAT < SRR4302542.683552/94‑1 (MQ=60)
TTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATT > SRR4302542.2708548/1‑94 (MQ=60)
TTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATT < SRR4302542.4659203/94‑1 (MQ=60)
TTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTT < SRR4302542.2448268/94‑1 (MQ=60)
TTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTT > SRR4302542.4035749/1‑94 (MQ=60)
TTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTT < SRR4302542.1668762/94‑1 (MQ=60)
TCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTG < SRR4302542.2317323/94‑1 (MQ=60)
TCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTG < SRR4302542.1331168/94‑1 (MQ=60)
TCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTG < SRR4302542.4741080/94‑1 (MQ=60)
TCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTG > SRR4302542.342043/1‑94 (MQ=60)
AGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCT < SRR4302542.5122086/94‑1 (MQ=60)
AGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCT < SRR4302542.1073691/94‑1 (MQ=60)
AGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCT > SRR4302542.3346304/1‑94 (MQ=60)
GTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTC > SRR4302542.1560812/1‑94 (MQ=60)
TTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAG < SRR4302542.2949183/94‑1 (MQ=60)
TTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAG < SRR4302542.7022372/94‑1 (MQ=60)
TTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAG < SRR4302542.6924973/94‑1 (MQ=60)
TTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAG < SRR4302542.2450917/94‑1 (MQ=60)
TGGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGG > SRR4302542.4469860/1‑94 (MQ=60)
GGATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGG > SRR4302542.3383270/1‑94 (MQ=60)
GATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGG > SRR4302542.3430192/1‑94 (MQ=60)
GATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGG < SRR4302542.3008570/94‑1 (MQ=60)
GATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGG < SRR4302542.2244875/94‑1 (MQ=60)
GATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAATTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGG > SRR4302542.6285808/1‑94 (MQ=60)
ATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGT < SRR4302542.2014213/94‑1 (MQ=60)
ATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGT > SRR4302542.6526077/1‑94 (MQ=60)
ATAACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGT < SRR4302542.4524345/94‑1 (MQ=60)
TAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTA > SRR4302542.47517/1‑94 (MQ=60)
AACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATGCGCGTAAATTCTTCTACTGCACGCGTAATTTGCTCAGGGGTAT < SRR4302542.3227062/94‑1 (MQ=60)
AACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTAT < SRR4302542.5903910/94‑1 (MQ=60)
AACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTAT < SRR4302542.7552476/94‑1 (MQ=60)
AACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTAT < SRR4302542.1338836/94‑1 (MQ=60)
AACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTAT > SRR4302542.7430275/1‑94 (MQ=60)
AACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTAT > SRR4302542.679910/1‑94 (MQ=60)
AACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTAT < SRR4302542.7114424/94‑1 (MQ=60)
AACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTAT < SRR4302542.2956968/94‑1 (MQ=60)
ACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATG < SRR4302542.3817535/94‑1 (MQ=60)
ACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATG > SRR4302542.6192890/1‑94 (MQ=60)
ACGCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATG < SRR4302542.724474/94‑1 (MQ=60)
GCTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCG < SRR4302542.3711007/94‑1 (MQ=60)
CTTTCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGC > SRR4302542.6431377/1‑94 (MQ=60)
TTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCC < SRR4302542.6602230/94‑1 (MQ=60)
TCATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGC > SRR4302542.6501137/1‑94 (MQ=60)
CATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCA < SRR4302542.2023006/94‑1 (MQ=60)
CATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCA > SRR4302542.240536/1‑94 (MQ=60)
ATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAG < SRR4302542.4030946/94‑1 (MQ=60)
ATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAG < SRR4302542.7091639/94‑1 (MQ=60)
ATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGTGGTATGCGCCGCAG > SRR4302542.2830753/1‑94 (MQ=60)
ATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAG > SRR4302542.4154911/1‑94 (MQ=60)
ATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAG > SRR4302542.64309/1‑94 (MQ=60)
ATCTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAG > SRR4302542.2830752/1‑94 (MQ=60)
CTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGAC > SRR4302542.729590/1‑94 (MQ=60)
CTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGAC > SRR4302542.4518975/1‑94 (MQ=60)
CTCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGAC < SRR4302542.7320640/94‑1 (MQ=60)
TCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACA > SRR4302542.6768901/1‑94 (MQ=60)
TCACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACA > SRR4302542.2077922/1‑94 (MQ=60)
CACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACAT > SRR4302542.6049795/1‑94 (MQ=60)
CACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACAT > SRR4302542.1141174/1‑94 (MQ=60)
ACATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATC < SRR4302542.2284869/94‑1 (MQ=60)
CATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCT < SRR4302542.2154609/94‑1 (MQ=60)
ATCCTCAGGCGATAACGCCCAGTTGTTTACCAATAGGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTG < SRR4302542.2469629/94‑1 (MQ=60)
ATCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTG < SRR4302542.423349/94‑1 (MQ=60)
TCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGG < SRR4302542.7414447/94‑1 (MQ=60)
TCCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGG < SRR4302542.5027200/94‑1 (MQ=60)
CCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGG < SRR4302542.4363213/94‑1 (MQ=60)
CCTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGG > SRR4302542.2718542/1‑94 (MQ=60)
CTCAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGT > SRR4302542.348464/1‑94 (MQ=60)
CAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTAC > SRR4302542.412073/1‑94 (MQ=60)
CAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTAC < SRR4302542.2751309/94‑1 (MQ=60)
CAGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTAC > SRR4302542.1629560/1‑94 (MQ=60)
AGGCGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACG > SRR4302542.4349236/1‑94 (MQ=60)
GGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGA > SRR4302542.523407/1‑94 (MQ=60)
CGATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGAAT < SRR4302542.2814244/94‑1 (MQ=60)
GATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGAATA > SRR4302542.1588369/1‑94 (MQ=60)
GATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGAATA > SRR4302542.3821742/1‑94 (MQ=60)
ATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGAATAC < SRR4302542.3011844/94‑1 (MQ=60)
ATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGAATAC > SRR4302542.1891062/1‑94 (MQ=60)
ATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCCCCGCAGACATCTGGGTACGAATAC < SRR4302542.2385722/94‑1 (MQ=60)
ATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGAATAC > SRR4302542.2060751/1‑94 (MQ=60)
ATAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGAATAC < SRR4302542.5115326/94‑1 (MQ=60)
TAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGAATACG > SRR4302542.7537206/1‑94 (MQ=60)
TAACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGAATACG > SRR4302542.670058/1‑94 (MQ=60)
AACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGAATACGC > SRR4302542.3234208/1‑94 (MQ=60)
AACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGAATACGC > SRR4302542.1121939/1‑94 (MQ=60)
ACACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGAATACGCG < SRR4302542.7182994/94‑1 (MQ=60)
CACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGAATACGCGC < SRR4302542.5669357/94‑1 (MQ=60)
CACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGAATACGCGC > SRR4302542.4378645/1‑94 (MQ=60)
ACCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTAAGGGGTATGCGCCGCAGACATCTGGGTACGAATACGCGCC > SRR4302542.936735/1‑94 (MQ=60)
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CCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGAATACGCGCC > NC_000913/3788901‑3789087
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
