Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,829,956 A→G C737R (TGC→CGC)  yicI ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,829,9560AG83.8% 806.3 / 147.9 363C737R (TGC→CGC) yicIhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (31/28);  new base G (153/151);  total (184/179)
Fisher's exact test for biased strand distribution p-value = 7.78e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.65e-01

Only 100 of 376 total aligned reads displayed.

CATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACCGATCCGT  >  NC_000913/3829866‑3830045
                                                                                          |                                                                                         
cATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGcgca                                                                                         <  2:3408597/93‑1 (MQ=255)
cATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGcgca                                                                                         >  2:6190431/1‑93 (MQ=255)
cATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGcgca                                                                                         <  1:1811221/93‑1 (MQ=255)
 aTTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTgcgcaggcgcag                                                                                        >  1:5332021/1‑93 (MQ=255)
  ttCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAgt                                                                                       >  2:498326/1‑93 (MQ=255)
  ttCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAgt                                                                                       <  1:1962894/93‑1 (MQ=255)
  ttCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAgt                                                                                       >  1:161105/1‑93 (MQ=255)
   tCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAgtg                                                                                      <  2:2722070/93‑1 (MQ=255)
       ttGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCa                                                                                  <  1:5536117/93‑1 (MQ=255)
       ttGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCa                                                                                  >  2:1463471/1‑93 (MQ=255)
       tagAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCa                                                                                  <  1:7179574/91‑1 (MQ=255)
         gAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGt                                                                                <  1:3015721/93‑1 (MQ=255)
           ggCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGttc                                                                              <  1:1542041/93‑1 (MQ=255)
           ggCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGttc                                                                              <  2:1693559/93‑1 (MQ=255)
              ttCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGttcttc                                                                           <  1:5592288/93‑1 (MQ=255)
              ttCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGttcttc                                                                           <  2:2265527/93‑1 (MQ=255)
               tCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTtcg                                                                          <  2:3709408/93‑1 (MQ=255)
                     ccaGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTtcgcctcgc                                                                    >  1:118770/1‑93 (MQ=255)
                     ccaGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTtcgcctcgc                                                                    <  2:3945663/93‑1 (MQ=255)
                      caGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTtcgcctcgcc                                                                   <  2:3321632/93‑1 (MQ=255)
                       aGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGccc                                                                  <  1:1718367/93‑1 (MQ=255)
                        gCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCg                                                                 >  1:6656058/1‑93 (MQ=255)
                          cccTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCa                                                               <  2:1175671/93‑1 (MQ=255)
                           ccTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCAc                                                              >  2:2145732/1‑93 (MQ=255)
                            cTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCAcc                                                             >  2:6237413/1‑93 (MQ=255)
                             tGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCa                                                            >  1:6180094/1‑93 (MQ=255)
                             tGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCa                                                            >  1:4085338/1‑93 (MQ=255)
                                tCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTc                                                         >  1:6904739/1‑93 (MQ=255)
                                tCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTc                                                         <  2:7222454/93‑1 (MQ=255)
                                tCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTc                                                         <  1:2911424/93‑1 (MQ=255)
                                tCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTc                                                         >  2:6127266/1‑93 (MQ=255)
                                tCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTc                                                         >  1:2348364/1‑93 (MQ=255)
                                 cACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGCTCTTCGCCTCGCCCGCACCAGTca                                                        >  2:5570415/1‑93 (MQ=255)
                                  aCTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTcac                                                       <  2:6757128/93‑1 (MQ=255)
                                  aCTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTcac                                                       >  2:7270109/1‑93 (MQ=255)
                                   cTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTcaca                                                      <  2:2592982/93‑1 (MQ=255)
                                    tttCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAg                                                     <  1:1153466/93‑1 (MQ=255)
                                     ttCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGt                                                    <  2:30699/93‑1 (MQ=255)
                                       cAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTaa                                                  <  2:7102646/93‑1 (MQ=255)
                                       cAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTaa                                                  <  2:4739595/93‑1 (MQ=255)
                                        aGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAAt                                                 <  1:5102158/93‑1 (MQ=255)
                                        aGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAAt                                                 <  1:4135894/93‑1 (MQ=255)
                                         gCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATc                                                >  2:4570570/1‑93 (MQ=255)
                                           cTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCgt                                              >  1:5918674/1‑93 (MQ=255)
                                           cTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCgt                                              <  1:788507/93‑1 (MQ=255)
                                            tGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCgtg                                             <  2:3233306/93‑1 (MQ=255)
                                            tGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCgtg                                             <  2:881810/93‑1 (MQ=255)
                                            tGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATtgtg                                             <  1:6979374/93‑1 (MQ=255)
                                             gCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCgtgt                                            <  2:4021349/93‑1 (MQ=255)
                                              cGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGtt                                           <  1:3500142/93‑1 (MQ=255)
                                                 aCCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTggc                                        >  1:2423139/1‑91 (MQ=255)
                                                 aCCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGcc                                        <  1:4531034/93‑1 (MQ=255)
                                                  ccGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCa                                       <  1:1442701/93‑1 (MQ=255)
                                                  ccGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCa                                       <  2:691079/93‑1 (MQ=255)
                                                       ttGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACg                                  >  1:3998853/1‑93 (MQ=255)
                                                       ttGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACg                                  >  2:6392368/1‑93 (MQ=255)
                                                       ttGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACg                                  >  1:4592777/1‑93 (MQ=255)
                                                         gCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGtg                                >  2:2043114/1‑93 (MQ=255)
                                                           aGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGtgct                              <  1:7430760/93‑1 (MQ=255)
                                                            gACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGtgctg                             >  1:7104772/1‑93 (MQ=255)
                                                            gACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGtgctg                             >  1:1048602/1‑93 (MQ=255)
                                                            gACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGtgctg                             >  1:222717/1‑93 (MQ=255)
                                                            gACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGtgctg                             >  1:3177304/1‑93 (MQ=255)
                                                             aCCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGtgctgc                            <  1:1359857/93‑1 (MQ=255)
                                                             aCCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGtgctgc                            <  1:3658290/93‑1 (MQ=255)
                                                              ccATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTgctgct                           <  1:2776595/93‑1 (MQ=255)
                                                              ccATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTgctgct                           <  1:4239772/93‑1 (MQ=255)
                                                               cATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCtt                          >  1:3561612/1‑93 (MQ=255)
                                                                 tttACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCtttt                        >  2:4815534/1‑93 (MQ=255)
                                                                 tttACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCtttt                        >  2:6550295/1‑93 (MQ=255)
                                                                   tACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTtaa                      >  1:5688514/1‑93 (MQ=255)
                                                                    aCTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTtaaa                     <  1:4932698/93‑1 (MQ=255)
                                                                    aCTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTtaaa                     >  1:311213/1‑93 (MQ=255)
                                                                    aCTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTtaaa                     <  2:3663672/93‑1 (MQ=255)
                                                                     cTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTtaaag                    >  2:4532682/1‑93 (MQ=255)
                                                                     cTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTtaaag                    >  2:6470850/1‑93 (MQ=255)
                                                                     cTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTtaaag                    >  2:2779262/1‑93 (MQ=255)
                                                                      tttCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTtaaagt                   <  1:1278300/93‑1 (MQ=255)
                                                                       ttCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTtaaagta                  >  2:1061782/1‑93 (MQ=255)
                                                                       ttCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTtaaagta                  >  1:5858155/1‑93 (MQ=255)
                                                                        tCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTtaaagtaa                 <  2:5708935/93‑1 (MQ=255)
                                                                         cacaACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTtaaagtaaa                >  2:5361113/1‑93 (MQ=255)
                                                                          acaacaTTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTtaaagtaaag               >  2:1375693/1‑93 (MQ=255)
                                                                           caacaTTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGa              <  1:632902/93‑1 (MQ=255)
                                                                           caacaTTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGa              <  2:7475444/93‑1 (MQ=255)
                                                                            aacaTTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGAt             >  1:646591/1‑93 (MQ=255)
                                                                            aacaTTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGAt             >  2:2010087/1‑93 (MQ=255)
                                                                             acaTTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATc            <  2:4375861/93‑1 (MQ=255)
                                                                             acaTTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATc            >  2:1890383/1‑93 (MQ=255)
                                                                             acaTTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATc            >  1:390545/1‑93 (MQ=255)
                                                                             acaTTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATc            <  1:5230373/93‑1 (MQ=255)
                                                                               aTTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCAc          >  1:6065574/1‑93 (MQ=255)
                                                                                ttGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCAcc         >  1:3438335/1‑93 (MQ=255)
                                                                                ttGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCAcc         <  1:5431937/93‑1 (MQ=255)
                                                                                 tGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACCg        >  2:6295052/1‑93 (MQ=255)
                                                                                  gcgcaggcgcagTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACCGa       <  2:5200339/93‑1 (MQ=255)
                                                                                    gcAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACCGATc     >  1:257835/1‑93 (MQ=255)
                                                                                    gcAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACCGATc     >  2:5913204/1‑93 (MQ=255)
                                                                                    gcAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGCACGTGCTGCTTTTAAAGTAAAGATCACCGATc     <  2:6033253/93‑1 (MQ=255)
                                                                                      aGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACCGATCCg   >  2:7373648/1‑93 (MQ=255)
                                                                                          |                                                                                         
CATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACCGATCCGT  >  NC_000913/3829866‑3830045

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 202 total aligned reads displayed.
GCGCATTCCCTTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACCGATCCGTCAGC  >  NC_000913/3829863‑3830049
                                                                                              |                                                                                             
GCGCATTCCCTTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCG                                                                                               <  SRR4302542.2952055/94‑1 (MQ=60)
GCGCATTCCCTTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCG                                                                                               <  SRR4302542.2099645/94‑1 (MQ=60)
 CGCATTCCCTTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGC                                                                                              <  SRR4302542.671333/94‑1 (MQ=60)
   CATTCCCTTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAG                                                                                            <  SRR4302542.1826917/94‑1 (MQ=60)
   CATTCCCTTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAG                                                                                            >  SRR4302542.5383831/1‑94 (MQ=60)
   CATTCCCTTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAG                                                                                            >  SRR4302542.5384993/1‑94 (MQ=60)
    ATTCCCTTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGT                                                                                           >  SRR4302542.1792736/1‑94 (MQ=60)
    ATTCCCTTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGT                                                                                           >  SRR4302542.1885814/1‑94 (MQ=60)
    ATTCCCTTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGT                                                                                           >  SRR4302542.162470/1‑94 (MQ=60)
    ATTCCCTTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGT                                                                                           <  SRR4302542.7278040/94‑1 (MQ=60)
     TTCCCTTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTG                                                                                          <  SRR4302542.6747052/94‑1 (MQ=60)
     TTCCCTTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTG                                                                                          <  SRR4302542.1979864/94‑1 (MQ=60)
      TCCCTTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGT                                                                                         <  SRR4302542.4534969/94‑1 (MQ=60)
      TCCCTTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGT                                                                                         <  SRR4302542.1422526/94‑1 (MQ=60)
      TCCCTTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGT                                                                                         >  SRR4302542.347760/1‑94 (MQ=60)
       CCCTTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTC                                                                                        >  SRR4302542.1233394/1‑94 (MQ=60)
        CCTTGAGGCTTCACCACCCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTC                                                                                        <  SRR4302542.2392330/94‑1 (MQ=60)
        CCTTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCC                                                                                       >  SRR4302542.5903539/1‑94 (MQ=60)
        CCTTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCCGCGAACCGTCTTGCAGACCATTTAATTTCCCAACATTGCGCAGGCGCAGTGTCC                                                                                       >  SRR4302542.1302262/1‑94 (MQ=60)
         CTTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCA                                                                                      >  SRR4302542.1629901/1‑94 (MQ=60)
         CTTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCA                                                                                      <  SRR4302542.2828906/94‑1 (MQ=60)
          TTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAG                                                                                     <  SRR4302542.4745947/94‑1 (MQ=60)
          TTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAG                                                                                     <  SRR4302542.5589931/94‑1 (MQ=60)
          TTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAG                                                                                     >  SRR4302542.3462620/1‑94 (MQ=60)
          TAGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAG                                                                                     <  SRR4302542.7249992/94‑1 (MQ=60)
           TGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGT                                                                                    <  SRR4302542.371849/94‑1 (MQ=60)
            GAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTT                                                                                   <  SRR4302542.3044542/94‑1 (MQ=60)
             AGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTC                                                                                  >  SRR4302542.618845/1‑94 (MQ=60)
              GGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCT                                                                                 <  SRR4302542.1555355/94‑1 (MQ=60)
              GGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCT                                                                                 >  SRR4302542.5649902/1‑94 (MQ=60)
               GCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTT                                                                                >  SRR4302542.6516571/1‑94 (MQ=60)
               GCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTT                                                                                <  SRR4302542.7029395/94‑1 (MQ=60)
                 TTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCG                                                                              >  SRR4302542.4032352/1‑94 (MQ=60)
                 TTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCG                                                                              <  SRR4302542.5646628/94‑1 (MQ=60)
                 TTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCG                                                                              <  SRR4302542.354730/94‑1 (MQ=60)
                 TTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCG                                                                              >  SRR4302542.3170050/1‑94 (MQ=60)
                 TTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCG                                                                              <  SRR4302542.2333798/94‑1 (MQ=60)
                  TCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGC                                                                             >  SRR4302542.2955102/1‑94 (MQ=60)
                  TCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGC                                                                             >  SRR4302542.5622958/1‑94 (MQ=60)
                    ACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCT                                                                           >  SRR4302542.7317226/1‑94 (MQ=60)
                     CCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTC                                                                          <  SRR4302542.1185075/94‑1 (MQ=60)
                     CCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTC                                                                          <  SRR4302542.3059529/94‑1 (MQ=60)
                      CA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCG                                                                         <  SRR4302542.5101931/94‑1 (MQ=60)
                       A‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGC                                                                        >  SRR4302542.119749/1‑94 (MQ=60)
                          CAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCC                                                                      <  SRR4302542.1896993/94‑1 (MQ=60)
                          CAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCC                                                                      >  SRR4302542.359384/1‑94 (MQ=60)
                           AGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCG                                                                     >  SRR4302542.6721644/1‑94 (MQ=60)
                           AGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCG                                                                     >  SRR4302542.5646733/1‑94 (MQ=60)
                           AGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCG                                                                     <  SRR4302542.1733289/94‑1 (MQ=60)
                            GCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGC                                                                    >  SRR4302542.4579459/1‑94 (MQ=60)
                              CCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCAC                                                                  >  SRR4302542.3540659/1‑94 (MQ=60)
                              CCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCAC                                                                  >  SRR4302542.1581753/1‑94 (MQ=60)
                               CCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACC                                                                 >  SRR4302542.3557390/1‑94 (MQ=60)
                               CCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACC                                                                 >  SRR4302542.4597016/1‑94 (MQ=60)
                                CTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCA                                                                <  SRR4302542.6460860/94‑1 (MQ=60)
                                CTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCA                                                                >  SRR4302542.6240034/1‑94 (MQ=60)
                                CTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCA                                                                >  SRR4302542.4125596/1‑94 (MQ=60)
                                CTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCA                                                                <  SRR4302542.5541745/94‑1 (MQ=60)
                                CTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCA                                                                <  SRR4302542.7339367/94‑1 (MQ=60)
                                 TGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAG                                                               <  SRR4302542.1654912/94‑1 (MQ=60)
                                   CTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTC                                                             >  SRR4302542.6972527/1‑94 (MQ=60)
                                   CTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTC                                                             >  SRR4302542.5599038/1‑94 (MQ=60)
                                   CTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTC                                                             >  SRR4302542.2368517/1‑94 (MQ=60)
                                    TCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCA                                                            <  SRR4302542.3471786/94‑1 (MQ=60)
                                    TCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCA                                                            <  SRR4302542.2939350/94‑1 (MQ=60)
                                     CACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCAC                                                           <  SRR4302542.4429970/94‑1 (MQ=60)
                                     CACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCAC                                                           >  SRR4302542.1490368/1‑94 (MQ=60)
                                     CACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCAC                                                           >  SRR4302542.2167836/1‑94 (MQ=60)
                                      ACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACA                                                          <  SRR4302542.4100248/94‑1 (MQ=60)
                                       CTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAG                                                         <  SRR4302542.4207307/94‑1 (MQ=60)
                                       CTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAG                                                         <  SRR4302542.7107803/94‑1 (MQ=60)
                                       CTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAG                                                         <  SRR4302542.808254/94‑1 (MQ=60)
                                        TTTCAGCCTGCGAACCGTCTTGCAGGCCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGT                                                        <  SRR4302542.1773525/94‑1 (MQ=60)
                                        TTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGT                                                        <  SRR4302542.1163354/94‑1 (MQ=60)
                                        TTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGT                                                        <  SRR4302542.1505385/94‑1 (MQ=60)
                                        TTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGT                                                        <  SRR4302542.5534035/94‑1 (MQ=60)
                                         TTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTA                                                       <  SRR4302542.30500/94‑1 (MQ=60)
                                          TCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAA                                                      <  SRR4302542.3141423/94‑1 (MQ=60)
                                           CAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAAT                                                     <  SRR4302542.5369906/94‑1 (MQ=60)
                                           CAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAAT                                                     >  SRR4302542.4905119/1‑94 (MQ=60)
                                            AGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATC                                                    <  SRR4302542.5151726/94‑1 (MQ=60)
                                            AGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATC                                                    <  SRR4302542.4176643/94‑1 (MQ=60)
                                            AGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATC                                                    >  SRR4302542.1329629/1‑94 (MQ=60)
                                            AGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATC                                                    >  SRR4302542.2780539/1‑94 (MQ=60)
                                            AGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATC                                                    >  SRR4302542.6847456/1‑94 (MQ=60)
                                              CCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGT                                                  >  SRR4302542.3368461/1‑94 (MQ=60)
                                              CCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGT                                                  <  SRR4302542.782513/94‑1 (MQ=60)
                                              CCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGT                                                  >  SRR4302542.5976032/1‑94 (MQ=60)
                                               CTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTG                                                 <  SRR4302542.795301/94‑1 (MQ=60)
                                               CTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTG                                                 >  SRR4302542.3631826/1‑94 (MQ=60)
                                               CTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTG                                                 >  SRR4302542.2886394/1‑94 (MQ=60)
                                                TGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATTGTGT                                                <  SRR4302542.7047929/94‑1 (MQ=60)
                                                 GCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTT                                               <  SRR4302542.5918330/94‑1 (MQ=60)
                                                 GCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTT                                               <  SRR4302542.1173395/94‑1 (MQ=60)
                                                 GCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTT                                               <  SRR4302542.716900/94‑1 (MQ=60)
                                                  CGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTG                                              <  SRR4302542.5599631/94‑1 (MQ=60)
                                                  CGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTG                                              <  SRR4302542.6081527/94‑1 (MQ=60)
                                                  CGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTG                                              <  SRR4302542.3532878/94‑1 (MQ=60)
                                                   GAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGC                                             >  SRR4302542.5504767/1‑94 (MQ=60)
                                                    AACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGGC                                            >  SRR4302542.2446705/1‑94 (MQ=60)
                                                    AACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCC                                            >  SRR4302542.4177717/1‑94 (MQ=60)
                                                    AACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCC                                            <  SRR4302542.2521207/94‑1 (MQ=60)
                                                    AACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCC                                            <  SRR4302542.5346531/94‑1 (MQ=60)
                                                     ACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCA                                           <  SRR4302542.4575414/94‑1 (MQ=60)
                                                      CCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAG                                          <  SRR4302542.7118491/94‑1 (MQ=60)
                                                      CCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAG                                          <  SRR4302542.1455154/94‑1 (MQ=60)
                                                       CGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGT                                         >  SRR4302542.6381821/1‑94 (MQ=60)
                                                       CGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGT                                         <  SRR4302542.2663686/94‑1 (MQ=60)
                                                       CGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGT‑ATCGTGTTGCCAGTA                                        >  SRR4302542.4150629/1‑94 (MQ=60)
                                                        GTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTA                                        >  SRR4302542.2276873/1‑94 (MQ=60)
                                                        GTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTA                                        >  SRR4302542.6035912/1‑94 (MQ=60)
                                                         TCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTAC                                       >  SRR4302542.131132/1‑94 (MQ=60)
                                                          CTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACG                                      <  SRR4302542.2925866/94‑1 (MQ=60)
                                                          CTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACG                                      >  SRR4302542.2575965/1‑94 (MQ=60)
                                                          CTTGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACG                                      >  SRR4302542.4038295/1‑94 (MQ=60)
                                                          CTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACG                                      >  SRR4302542.4637694/1‑94 (MQ=60)
                                                            TGCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTG                                    <  SRR4302542.4285464/94‑1 (MQ=60)
                                                            TGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTG                                    <  SRR4302542.1580858/94‑1 (MQ=60)
                                                             GCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGC                                   <  SRR4302542.2481621/94‑1 (MQ=60)
                                                             GCAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGC                                   <  SRR4302542.5024493/94‑1 (MQ=60)
                                                              CAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCT                                  >  SRR4302542.5929361/1‑94 (MQ=60)
                                                              CAGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCT                                  >  SRR4302542.6195729/1‑94 (MQ=60)
                                                              CAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCT                                  <  SRR4302542.2624194/94‑1 (MQ=60)
                                                               AGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTG                                 >  SRR4302542.224646/1‑94 (MQ=60)
                                                               AGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTG                                 <  SRR4302542.7507226/94‑1 (MQ=60)
                                                               AGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTG                                 <  SRR4302542.7503480/94‑1 (MQ=60)
                                                               AGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTG                                 >  SRR4302542.1057599/1‑94 (MQ=60)
                                                               AGACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTG                                 >  SRR4302542.7174512/1‑94 (MQ=60)
                                                               AGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTG                                 >  SRR4302542.3207417/1‑94 (MQ=60)
                                                                 ACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCT                               <  SRR4302542.225648/94‑1 (MQ=60)
                                                                 ACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCT                               <  SRR4302542.1371617/94‑1 (MQ=60)
                                                                 ACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCT                               <  SRR4302542.3692680/94‑1 (MQ=60)
                                                                 ACCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCT                               <  SRR4302542.5992962/94‑1 (MQ=60)
                                                                  CCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTT                              <  SRR4302542.6706452/94‑1 (MQ=60)
                                                                  CCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTT                              <  SRR4302542.4281522/94‑1 (MQ=60)
                                                                  CCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTT                              >  SRR4302542.3594865/1‑94 (MQ=60)
                                                                  CCATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTT                              <  SRR4302542.2803334/94‑1 (MQ=60)
                                                                  CCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTT                              <  SRR4302542.6990353/94‑1 (MQ=60)
                                                                  CCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTT                              >  SRR4302542.3803385/1‑94 (MQ=60)
                                                                   CATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTT                             <  SRR4302542.1578479/94‑1 (MQ=60)
                                                                   CATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTT                             >  SRR4302542.5395800/1‑94 (MQ=60)
                                                                    ATTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTT                            >  SRR4302542.2131216/1‑94 (MQ=60)
                                                                     TTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTA                           <  SRR4302542.5793208/94‑1 (MQ=60)
                                                                     TTTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTA                           >  SRR4302542.2410787/1‑94 (MQ=60)
                                                                      TTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAA                          >  SRR4302542.5743755/1‑94 (MQ=60)
                                                                      TTACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAA                          >  SRR4302542.5867978/1‑94 (MQ=60)
                                                                      TTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAA                          >  SRR4302542.2086796/1‑94 (MQ=60)
                                                                       TACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAA                         >  SRR4302542.1208609/1‑94 (MQ=60)
                                                                       TACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAA                         >  SRR4302542.6569210/1‑94 (MQ=60)
                                                                       TACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAA                         >  SRR4302542.313918/1‑94 (MQ=60)
                                                                        ACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAG                        <  SRR4302542.1208523/94‑1 (MQ=60)
                                                                        ACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAG                        <  SRR4302542.4980650/94‑1 (MQ=60)
                                                                        ACTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAG                        <  SRR4302542.3625087/94‑1 (MQ=60)
                                                                         CTTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGT                       <  SRR4302542.1076605/94‑1 (MQ=60)
                                                                          TTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTA                      >  SRR4302542.5914961/1‑94 (MQ=60)
                                                                          TTTCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTA                      <  SRR4302542.1289299/94‑1 (MQ=60)
                                                                            TCACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAA                    <  SRR4302542.5915714/94‑1 (MQ=60)
                                                                            TCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAA                    <  SRR4302542.667668/94‑1 (MQ=60)
                                                                             CACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAG                   >  SRR4302542.398726/1‑94 (MQ=60)
                                                                             CACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAG                   >  SRR4302542.704478/1‑94 (MQ=60)
                                                                             CACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAG                   >  SRR4302542.6250864/1‑94 (MQ=60)
                                                                              ACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGA                  >  SRR4302542.7227381/1‑94 (MQ=60)
                                                                              ACAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGA                  >  SRR4302542.1956181/1‑94 (MQ=60)
                                                                               CAACATTGCGCCGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGAT                 <  SRR4302542.5470591/94‑1 (MQ=60)
                                                                               CAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGAT                 <  SRR4302542.3330987/94‑1 (MQ=60)
                                                                               CAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGAT                 <  SRR4302542.4172716/94‑1 (MQ=60)
                                                                               CAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGAT                 >  SRR4302542.1101802/1‑94 (MQ=60)
                                                                               CAACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGAT                 >  SRR4302542.652144/1‑94 (MQ=60)
                                                                               CAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGAT                 >  SRR4302542.1540314/1‑94 (MQ=60)
                                                                               CAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGAT                 <  SRR4302542.638355/94‑1 (MQ=60)
                                                                                NNCATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATC                <  SRR4302542.97872/94‑1 (MQ=60)
                                                                                AACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATC                >  SRR4302542.5257185/1‑94 (MQ=60)
                                                                                AACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATC                >  SRR4302542.393921/1‑94 (MQ=60)
                                                                                 ACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCA               >  SRR4302542.4742668/1‑94 (MQ=60)
                                                                                 ACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCA               <  SRR4302542.1173719/94‑1 (MQ=60)
                                                                                 ACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCA               <  SRR4302542.5281236/94‑1 (MQ=60)
                                                                                 ACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCA               <  SRR4302542.3150543/94‑1 (MQ=60)
                                                                                 ACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCA               >  SRR4302542.703055/1‑94 (MQ=60)
                                                                                 ACATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCA               <  SRR4302542.4227944/94‑1 (MQ=60)
                                                                                  CATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCAC              >  SRR4302542.6124323/1‑94 (MQ=60)
                                                                                  CATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCAC              <  SRR4302542.4145817/94‑1 (MQ=60)
                                                                                  CATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCAC              >  SRR4302542.2965635/1‑94 (MQ=60)
                                                                                  CATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCAC              <  SRR4302542.637028/94‑1 (MQ=60)
                                                                                   ATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACC             <  SRR4302542.3152764/94‑1 (MQ=60)
                                                                                   ATTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACC             >  SRR4302542.3470523/1‑94 (MQ=60)
                                                                                   ATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACC             <  SRR4302542.5194483/94‑1 (MQ=60)
                                                                                    TTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACCG            <  SRR4302542.7249467/94‑1 (MQ=60)
                                                                                    TTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACCG            <  SRR4302542.3916252/94‑1 (MQ=60)
                                                                                    TTGCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACCG            <  SRR4302542.5484721/94‑1 (MQ=60)
                                                                                      GCGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACCGAT          <  SRR4302542.3950795/94‑1 (MQ=60)
                                                                                       CGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACCGATC         >  SRR4302542.260032/1‑94 (MQ=60)
                                                                                       CGCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACCGATC         >  SRR4302542.1688766/1‑94 (MQ=60)
                                                                                        GCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACCGATCC        >  SRR4302542.518222/1‑94 (MQ=60)
                                                                                        GCAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACCGATCC        <  SRR4302542.5021082/94‑1 (MQ=60)
                                                                                         CAGGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACCGATCCG       >  SRR4302542.1407422/1‑94 (MQ=60)
                                                                                           GGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACCGATCCGTC     <  SRR4302542.6400217/94‑1 (MQ=60)
                                                                                           GGCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACCGATCCGTC     >  SRR4302542.4174009/1‑94 (MQ=60)
                                                                                            GCGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACCGATCCGTCA    <  SRR4302542.328688/94‑1 (MQ=60)
                                                                                             CGCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACCGATCCGTCAG   <  SRR4302542.3131143/94‑1 (MQ=60)
                                                                                              GCAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACCGATCCGTCAGC  >  SRR4302542.5858293/1‑94 (MQ=60)
                                                                                              |                                                                                             
GCGCATTCCCTTGAGGCTTCACCA‑CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTACGTGCTGCTTTTAAAGTAAAGATCACCGATCCGTCAGC  >  NC_000913/3829863‑3830049

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑