Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,854,698 T→C Y445C (TAC→TGC)  yidJ ← putative sulfatase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,854,6980TC84.6% 763.8 / 127.0 332Y445C (TAC→TGC) yidJputative sulfatase
Reads supporting (aligned to +/- strand):  ref base T (17/34);  new base C (122/159);  total (139/193)
Fisher's exact test for biased strand distribution p-value = 2.18e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01

Only 100 of 333 total aligned reads displayed.

ACTGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCATCGATC  >  NC_000913/3854608‑3854790
                                                                                          |                                                                                            
aCTGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCaa                                                                                            >  1:5673292/1‑93 (MQ=255)
 cTGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAAc                                                                                           <  1:7300261/93‑1 (MQ=255)
       aaTAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGa                                                                                     >  1:5276589/1‑93 (MQ=255)
        aTAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGTAACTGCGGaa                                                                                    <  1:7389831/93‑1 (MQ=255)
         tAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGTAACTGCGGAAc                                                                                   >  2:3141813/1‑93 (MQ=255)
          aGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACg                                                                                  <  2:6465562/93‑1 (MQ=255)
           gCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACgg                                                                                 <  1:5376844/93‑1 (MQ=255)
            ccATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGa                                                                                <  2:360226/93‑1 (MQ=255)
             cATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGAt                                                                               <  2:2685210/93‑1 (MQ=255)
              aTCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATc                                                                              >  2:4600356/1‑93 (MQ=255)
              aTCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATc                                                                              <  1:1371078/93‑1 (MQ=255)
              aTCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATc                                                                              <  2:4336467/93‑1 (MQ=255)
               tCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATcg                                                                             >  1:933305/1‑93 (MQ=255)
               tCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATcg                                                                             >  1:3387607/1‑93 (MQ=255)
                cTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGTAACTGCGGAACGGATcgc                                                                            <  2:6026349/93‑1 (MQ=255)
                cTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATcgc                                                                            <  1:4496256/93‑1 (MQ=255)
                cTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATcgc                                                                            >  2:5243811/1‑93 (MQ=255)
                    tggacgtggacgAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGTAACTGCGGAACGGATCGCGAAt                                                                        <  2:5750182/93‑1 (MQ=255)
                     ggacgtggacgAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAAtt                                                                       <  1:4727958/93‑1 (MQ=255)
                      gacgtggacgAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAAttt                                                                      <  1:5620662/93‑1 (MQ=255)
                       acgtggacgAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAAtttt                                                                     >  1:6540960/1‑93 (MQ=255)
                         gtggacgAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGTAACTGCGGAACGGATCGCGAATTTTGt                                                                   <  1:3022915/93‑1 (MQ=255)
                          tggacgAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTc                                                                  <  2:6358131/93‑1 (MQ=255)
                          tggacgAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTc                                                                  >  2:169816/1‑93 (MQ=255)
                          tggacgAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTc                                                                  >  1:5097662/1‑93 (MQ=255)
                           ggacgAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTcc                                                                 >  2:7087245/1‑93 (MQ=255)
                            gacgAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCa                                                                <  2:3958332/93‑1 (MQ=255)
                            gacgAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCa                                                                >  2:4417745/1‑93 (MQ=255)
                             acgAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCAt                                                               >  1:6774021/1‑93 (MQ=255)
                               gAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGt                                                             <  2:2185866/93‑1 (MQ=255)
                                aaaCGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTa                                                            >  1:1818993/1‑93 (MQ=255)
                                 aaCGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTaa                                                           <  2:1102216/93‑1 (MQ=255)
                                 aaCGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTaa                                                           <  1:1044557/93‑1 (MQ=255)
                                 aaCGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTaa                                                           <  2:4689238/93‑1 (MQ=255)
                                  aCGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAAt                                                          <  2:2601068/93‑1 (MQ=255)
                                    gCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATcc                                                        <  1:4978053/93‑1 (MQ=255)
                                    gCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATcc                                                        >  1:3596988/1‑93 (MQ=255)
                                    gCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATcc                                                        >  1:379401/1‑93 (MQ=255)
                                      ccccATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCaa                                                      >  1:6033563/1‑93 (MQ=255)
                                      ccccATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCaa                                                      <  2:3387430/93‑1 (MQ=255)
                                       cccATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAAt                                                     <  1:6142916/93‑1 (MQ=255)
                                       cccATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAAt                                                     <  1:5429372/93‑1 (MQ=255)
                                       cccATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAAt                                                     >  1:6914486/1‑93 (MQ=255)
                                         cATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATaa                                                   <  1:1983545/93‑1 (MQ=255)
                                         cATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATaa                                                   >  1:5948313/1‑93 (MQ=255)
                                         cATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATaa                                                   <  2:5114805/93‑1 (MQ=255)
                                         cATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATaa                                                   <  1:2853695/93‑1 (MQ=255)
                                          aTCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAg                                                  >  1:6671772/1‑93 (MQ=255)
                                            ccAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGc                                                <  2:692223/93‑1 (MQ=255)
                                             cAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCg                                               <  2:777136/93‑1 (MQ=255)
                                             cAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCg                                               <  2:5536878/93‑1 (MQ=255)
                                              aGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGt                                              >  2:1665794/1‑93 (MQ=255)
                                               gcgcGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTc                                             >  2:2282382/1‑93 (MQ=255)
                                               gcgcGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTc                                             >  1:1196075/1‑93 (MQ=255)
                                               gcgcGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTc                                             >  1:999931/1‑93 (MQ=255)
                                               gcgcGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTc                                             <  1:6632877/93‑1 (MQ=255)
                                                       gTGCATCTTTACGCCACGGACGCAGACTCCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCAttt                                     <  2:2774699/93‑1 (MQ=255)
                                                       gTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCAttt                                     >  1:6375234/1‑93 (MQ=255)
                                                       gTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCAttt                                     >  2:6207822/1‑93 (MQ=255)
                                                        tGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCAtttt                                    >  1:4838617/1‑93 (MQ=255)
                                                        tGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCAtttt                                    <  1:6965240/93‑1 (MQ=255)
                                                         gCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTtg                                   >  1:1507570/1‑93 (MQ=255)
                                                          cATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTtgc                                  >  1:7170419/1‑93 (MQ=255)
                                                           aTCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTtgct                                 <  1:7318351/93‑1 (MQ=255)
                                                           aTCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTtgct                                 <  2:3798964/93‑1 (MQ=255)
                                                            tCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTtgctg                                >  2:3759658/1‑93 (MQ=255)
                                                            tCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTtgctg                                >  1:43325/1‑93 (MQ=255)
                                                            tCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTtgctg                                <  2:7249797/93‑1 (MQ=255)
                                                             cTTTACGCCACGGACGCAGACTCCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTtgctgc                               <  2:3579886/93‑1 (MQ=255)
                                                             cTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTtgctgc                               <  2:2521055/93‑1 (MQ=255)
                                                              tttACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCg                              >  1:7061771/1‑93 (MQ=255)
                                                               ttACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGa                             >  1:1738571/1‑93 (MQ=255)
                                                                 aCGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAAc                           >  1:3463292/1‑93 (MQ=255)
                                                                   gCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGt                         <  2:7388301/93‑1 (MQ=255)
                                                                    ccACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTc                        <  2:593232/93‑1 (MQ=255)
                                                                    ccACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTc                        <  1:2759404/93‑1 (MQ=255)
                                                                    ccACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTc                        <  1:3245271/93‑1 (MQ=255)
                                                                    ccACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTc                        <  1:4799327/93‑1 (MQ=255)
                                                                    ccACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTc                        <  2:427577/93‑1 (MQ=255)
                                                                      aCGGACGCAGACTCCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTg                      <  2:2341881/93‑1 (MQ=255)
                                                                       cGGACGCAGACTCCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGc                     <  2:1037770/93‑1 (MQ=255)
                                                                           cGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCaaaa                 >  2:1326307/1‑93 (MQ=255)
                                                                            gCAGACTCCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAAc                <  1:2282195/93‑1 (MQ=255)
                                                                              aGACTCCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACgg              >  1:3123301/1‑93 (MQ=255)
                                                                              aGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACgg              <  1:7469482/93‑1 (MQ=255)
                                                                               gACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGa             <  2:1993490/93‑1 (MQ=255)
                                                                               gACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGa             <  2:1517268/93‑1 (MQ=255)
                                                                                aCTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGat            >  1:6294300/1‑93 (MQ=255)
                                                                                 cTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGata           <  1:2462582/93‑1 (MQ=255)
                                                                                 cTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGata           >  1:1310260/1‑93 (MQ=255)
                                                                                   ccATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATatc         <  1:5599179/93‑1 (MQ=255)
                                                                                   ccATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATatc         >  2:5007283/1‑93 (MQ=255)
                                                                                   ccATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATatc         <  1:811282/93‑1 (MQ=255)
                                                                                    cATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATatca        <  2:5418561/93‑1 (MQ=255)
                                                                                    cATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATatca        >  2:29034/1‑93 (MQ=255)
                                                                                    cATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATatca        <  1:2371364/93‑1 (MQ=255)
                                                                                     aTTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATatcat       <  2:842652/93‑1 (MQ=255)
                                                                                      ttGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATatcatc      >  2:6526703/1‑93 (MQ=255)
                                                                                      ttGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATatcatc      >  1:3902370/1‑93 (MQ=255)
                                                                                          tAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCATCGATc  >  2:4155866/1‑93 (MQ=255)
                                                                                          |                                                                                            
ACTGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCATCGATC  >  NC_000913/3854608‑3854790

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ACAACTGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCATCGATCA  >  NC_000913/3854605‑3854791
                                                                                             |                                                                                             
tgagagttCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGC                                                                                               <  SRR4302542.5658322/86‑1 (MQ=60)
ACAACTGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGC                                                                                               <  SRR4302542.1172644/94‑1 (MQ=60)
 CAACTGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCA                                                                                              >  SRR4302542.4441012/1‑94 (MQ=60)
  AACTGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAA                                                                                             >  SRR4302542.5728391/1‑94 (MQ=60)
   ACTGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAAC                                                                                            <  SRR4302542.4468969/94‑1 (MQ=60)
    CTGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGTAACT                                                                                           >  SRR4302542.3453663/1‑94 (MQ=60)
    CTGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACT                                                                                           <  SRR4302542.7371794/94‑1 (MQ=60)
     TGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGTAACTG                                                                                          >  SRR4302542.4873572/1‑94 (MQ=60)
     TGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTG                                                                                          <  SRR4302542.4534472/94‑1 (MQ=60)
     TGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTG                                                                                          >  SRR4302542.6993344/1‑94 (MQ=60)
      GGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGC                                                                                         <  SRR4302542.2990863/94‑1 (MQ=60)
       GCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCG                                                                                        <  SRR4302542.755301/94‑1 (MQ=60)
         GAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGA                                                                                      >  SRR4302542.5327863/1‑94 (MQ=60)
          AATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAA                                                                                     >  SRR4302542.5592586/1‑94 (MQ=60)
           atagcatcctggtggcggtgaACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTCCGCCCCGGACGCAGCCTCCATTGGCAACTGCGGAAC                                                                                    <  SRR4302542.6225652/73‑1 (MQ=60)
           ATAGCCTTCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTCCGCCACGGACGCAGACTCCATTGGCAACTGCGGAAC                                                                                    <  SRR4302542.6225653/94‑1 (MQ=60)
           ATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGTAACTGCGGAAC                                                                                    <  SRR4302542.7462171/94‑1 (MQ=60)
           ATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAAC                                                                                    >  SRR4302542.5050965/1‑94 (MQ=60)
             AGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGTAACTGCGGAACGG                                                                                  <  SRR4302542.4109457/94‑1 (MQ=60)
             AGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGTAACTGCGGAACGG                                                                                  <  SRR4302542.906134/94‑1 (MQ=60)
             AGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGG                                                                                  <  SRR4302542.5670371/94‑1 (MQ=60)
             AGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGCCAACTGCGGAACGG                                                                                  >  SRR4302542.7566202/1‑94 (MQ=60)
              GCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGA                                                                                 <  SRR4302542.5429087/94‑1 (MQ=60)
               CCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGAT                                                                                <  SRR4302542.557684/94‑1 (MQ=60)
               CCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGAT                                                                                >  SRR4302542.1401891/1‑94 (MQ=60)
                 ATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCG                                                                              <  SRR4302542.1382933/94‑1 (MQ=60)
                 ATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCG                                                                              >  SRR4302542.2819497/1‑94 (MQ=60)
                 ATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCG                                                                              >  SRR4302542.617251/1‑94 (MQ=60)
                 ATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCG                                                                              >  SRR4302542.5102681/1‑94 (MQ=60)
                 ATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCG                                                                              >  SRR4302542.941340/1‑94 (MQ=60)
                 ATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCG                                                                              >  SRR4302542.6644331/1‑94 (MQ=60)
                 ATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCG                                                                              >  SRR4302542.4772010/1‑94 (MQ=60)
                 ATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCG                                                                              >  SRR4302542.3419403/1‑94 (MQ=60)
                 ATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCG                                                                              >  SRR4302542.2633887/1‑94 (MQ=60)
                   CTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCCTCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCG                                                                            <  SRR4302542.7372585/94‑1 (MQ=60)
                   CTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCG                                                                            <  SRR4302542.6845775/94‑1 (MQ=60)
                   CTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCG                                                                            <  SRR4302542.6604114/94‑1 (MQ=60)
                   CTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCG                                                                            <  SRR4302542.4540364/94‑1 (MQ=60)
                      GTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAAT                                                                         <  SRR4302542.3125138/94‑1 (MQ=60)
                      GTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAAT                                                                         <  SRR4302542.3356154/94‑1 (MQ=60)
                      GTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAAT                                                                         <  SRR4302542.5787579/94‑1 (MQ=60)
                        GGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTT                                                                       <  SRR4302542.4774061/94‑1 (MQ=60)
                         GACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGTAACTGCGGAACGGATCGCGAATTTT                                                                      <  SRR4302542.7445896/94‑1 (MQ=60)
                         GACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTT                                                                      >  SRR4302542.6605454/1‑94 (MQ=60)
                         GACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTC                                                                      <  SRR4302542.5675263/94‑1 (MQ=60)
                          ACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTG                                                                     <  SRR4302542.6605857/94‑1 (MQ=60)
                            GTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGTAACTGCGGAACGGATCGCGAATTTTGTC                                                                   <  SRR4302542.3051773/94‑1 (MQ=60)
                            GTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTC                                                                   >  SRR4302542.6858747/1‑94 (MQ=60)
                            GTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTC                                                                   >  SRR4302542.5147198/1‑94 (MQ=60)
                              GGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCA                                                                 <  SRR4302542.1414931/94‑1 (MQ=60)
                              GGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCA                                                                 >  SRR4302542.7273040/1‑94 (MQ=60)
                              GGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCA                                                                 >  SRR4302542.6734561/1‑94 (MQ=60)
                               GACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCAT                                                                >  SRR4302542.6840661/1‑94 (MQ=60)
                                ACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATG                                                               <  SRR4302542.5448405/94‑1 (MQ=60)
                                 CGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGT                                                              >  SRR4302542.1822010/1‑94 (MQ=60)
                                 CGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGT                                                              >  SRR4302542.5471410/1‑94 (MQ=60)
                                  GAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTA                                                             >  SRR4302542.1834740/1‑94 (MQ=60)
                                  GAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTA                                                             >  SRR4302542.6300489/1‑94 (MQ=60)
                                    AACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAAT                                                           <  SRR4302542.1053518/94‑1 (MQ=60)
                                    AACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAAT                                                           <  SRR4302542.3306438/94‑1 (MQ=60)
                                    AACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAAT                                                           <  SRR4302542.2963572/94‑1 (MQ=60)
                                    AACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAAT                                                           <  SRR4302542.7486239/94‑1 (MQ=60)
                                     ACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATC                                                          <  SRR4302542.566994/94‑1 (MQ=60)
                                      CGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCC                                                         >  SRR4302542.3630527/1‑94 (MQ=60)
                                      CGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCC                                                         >  SRR4302542.382701/1‑94 (MQ=60)
                                       GCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCA                                                        >  SRR4302542.7408577/1‑94 (MQ=60)
                                       GCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCA                                                        <  SRR4302542.5026375/94‑1 (MQ=60)
                                       GCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCA                                                        >  SRR4302542.3507776/1‑94 (MQ=60)
                                        CCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAA                                                       >  SRR4302542.7377287/1‑94 (MQ=60)
                                        CCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAA                                                       >  SRR4302542.6091975/1‑94 (MQ=60)
                                        CCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAA                                                       >  SRR4302542.3344226/1‑94 (MQ=60)
                                         CCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAAT                                                      >  SRR4302542.324917/1‑94 (MQ=60)
                                         CCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAAT                                                      >  SRR4302542.4859108/1‑94 (MQ=60)
                                         CCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAAT                                                      >  SRR4302542.6982364/1‑94 (MQ=60)
                                         CCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAAT                                                      >  SRR4302542.1338765/1‑94 (MQ=60)
                                         CCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAAT                                                      >  SRR4302542.1849974/1‑94 (MQ=60)
                                          CCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATA                                                     <  SRR4302542.952300/94‑1 (MQ=60)
                                          CCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATA                                                     <  SRR4302542.6202351/94‑1 (MQ=60)
                                          CCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCCTGTAATCCAATA                                                     >  SRR4302542.2402580/1‑94 (MQ=60)
                                          CCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATA                                                     <  SRR4302542.5482130/94‑1 (MQ=60)
                                           CCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAA                                                    >  SRR4302542.6005923/1‑94 (MQ=60)
                                           CCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAA                                                    <  SRR4302542.1734120/94‑1 (MQ=60)
                                            CATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAG                                                   >  SRR4302542.6737503/1‑94 (MQ=60)
                                            CATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAG                                                   <  SRR4302542.2000663/94‑1 (MQ=60)
                                            CATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAG                                                   <  SRR4302542.3128161/94‑1 (MQ=60)
                                            CATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAG                                                   <  SRR4302542.2881117/94‑1 (MQ=60)
                                            CATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAG                                                   <  SRR4302542.6396937/94‑1 (MQ=60)
                                             ATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGG                                                  <  SRR4302542.2135564/94‑1 (MQ=60)
                                             ATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGG                                                  <  SRR4302542.1121888/94‑1 (MQ=60)
                                             ATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGG                                                  >  SRR4302542.242391/1‑94 (MQ=60)
                                               CCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCG                                                <  SRR4302542.5679515/94‑1 (MQ=60)
                                               CCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCG                                                >  SRR4302542.1517813/1‑94 (MQ=60)
                                                CAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGT                                               >  SRR4302542.1894518/1‑94 (MQ=60)
                                                 AGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTC                                              >  SRR4302542.1008535/1‑94 (MQ=60)
                                                 AGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTC                                              >  SRR4302542.1206368/1‑94 (MQ=60)
                                                  GCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCA                                             <  SRR4302542.6698261/94‑1 (MQ=60)
                                                   CGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCAT                                            <  SRR4302542.2308061/94‑1 (MQ=60)
                                                   CGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCAT                                            <  SRR4302542.850904/94‑1 (MQ=60)
                                                    GCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATG                                           <  SRR4302542.2370008/94‑1 (MQ=60)
                                                      GGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCA                                         >  SRR4302542.6686275/1‑94 (MQ=60)
                                                       GCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCAT                                        <  SRR4302542.3444053/94‑1 (MQ=60)
                                                         CGTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTT                                      >  SRR4302542.6438009/1‑94 (MQ=60)
                                                          GTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTT                                     >  SRR4302542.5307632/1‑94 (MQ=60)
                                                          GTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTT                                     >  SRR4302542.4885749/1‑94 (MQ=60)
                                                          GTGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTT                                     >  SRR4302542.5320410/1‑94 (MQ=60)
                                                           TGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTG                                    <  SRR4302542.7033674/94‑1 (MQ=60)
                                                           TGCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTG                                    >  SRR4302542.1520605/1‑94 (MQ=60)
                                                            GCATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGC                                   >  SRR4302542.7240749/1‑94 (MQ=60)
                                                             CATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCT                                  >  SRR4302542.6183790/1‑94 (MQ=60)
                                                             CATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCT                                  <  SRR4302542.4466695/94‑1 (MQ=60)
                                                             CATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCT                                  >  SRR4302542.7150711/1‑94 (MQ=60)
                                                              ATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTG                                 >  SRR4302542.43700/1‑94 (MQ=60)
                                                              ATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTG                                 >  SRR4302542.7110031/1‑94 (MQ=60)
                                                              ATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTG                                 >  SRR4302542.5409918/1‑94 (MQ=60)
                                                              ATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTG                                 >  SRR4302542.485445/1‑94 (MQ=60)
                                                              ATCTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTG                                 <  SRR4302542.7390028/94‑1 (MQ=60)
                                                                CTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCG                               <  SRR4302542.4812389/94‑1 (MQ=60)
                                                                CTTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCG                               >  SRR4302542.7131081/1‑94 (MQ=60)
                                                                 TTTACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGA                              >  SRR4302542.1753654/1‑94 (MQ=60)
                                                                   TACGCCACGGACGCAGACTCCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAAC                            <  SRR4302542.7433192/94‑1 (MQ=60)
                                                                   TACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAAC                            <  SRR4302542.6494375/94‑1 (MQ=60)
                                                                   TACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAAC                            <  SRR4302542.1537548/94‑1 (MQ=60)
                                                                   TACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAAC                            >  SRR4302542.3495727/1‑94 (MQ=60)
                                                                   TACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAAC                            <  SRR4302542.4997595/94‑1 (MQ=60)
                                                                    ACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACG                           <  SRR4302542.391646/94‑1 (MQ=60)
                                                                    ACGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACG                           <  SRR4302542.3915698/94‑1 (MQ=60)
                                                                     CGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGT                          <  SRR4302542.7329484/94‑1 (MQ=60)
                                                                     CGCCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGT                          <  SRR4302542.527773/94‑1 (MQ=60)
                                                                       CCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCT                        <  SRR4302542.989594/94‑1 (MQ=60)
                                                                       CCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCT                        <  SRR4302542.4846081/94‑1 (MQ=60)
                                                                       CCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCT                        <  SRR4302542.3275944/94‑1 (MQ=60)
                                                                       CCACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCT                        <  SRR4302542.2785995/94‑1 (MQ=60)
                                                                        CACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTG                       >  SRR4302542.6962005/1‑94 (MQ=60)
                                                                        CACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTG                       >  SRR4302542.4221666/1‑94 (MQ=60)
                                                                        CACGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTG                       <  SRR4302542.6762328/94‑1 (MQ=60)
                                                                          CGGACGCAGACTCCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCA                     >  SRR4302542.3190355/1‑94 (MQ=60)
                                                                          CGGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCA                     >  SRR4302542.7168925/1‑94 (MQ=60)
                                                                           GGACGCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAA                    >  SRR4302542.5851172/1‑94 (MQ=60)
                                                                              CGCAGTCTCCATTGGCAACGGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAGCGTCTGCAAAAC                 <  SRR4302542.7020594/94‑1 (MQ=60)
                                                                               GCAGACTCCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACG                <  SRR4302542.2301802/94‑1 (MQ=60)
                                                                               GCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACG                <  SRR4302542.6746601/94‑1 (MQ=60)
                                                                               GCAGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGCCATGCATTTTGCTGCGAACGTCTGCAAAACG                <  SRR4302542.2553876/94‑1 (MQ=60)
                                                                                CAGACTCCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGG               >  SRR4302542.3153008/1‑94 (MQ=60)
                                                                                CAGACTCCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGG               <  SRR4302542.497464/94‑1 (MQ=60)
                                                                                 AGACTCCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGA              >  SRR4302542.1933546/1‑94 (MQ=60)
                                                                                 AGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGA              >  SRR4302542.6081985/1‑94 (MQ=60)
                                                                                 AGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGA              <  SRR4302542.4783232/94‑1 (MQ=60)
                                                                                 AGACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGA              <  SRR4302542.7542671/94‑1 (MQ=60)
                                                                                  GACTCCATTTGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGAT             >  SRR4302542.3789695/1‑94 (MQ=60)
                                                                                  GACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGAT             >  SRR4302542.6356313/1‑94 (MQ=60)
                                                                                  GACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGAT             >  SRR4302542.5333129/1‑94 (MQ=60)
                                                                                  GACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGAT             <  SRR4302542.2940302/94‑1 (MQ=60)
                                                                                   ACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATA            >  SRR4302542.1321550/1‑94 (MQ=60)
                                                                                   ACTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATA            <  SRR4302542.870915/94‑1 (MQ=60)
                                                                                    CTCCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATAT           >  SRR4302542.621638/1‑94 (MQ=60)
                                                                                    CTCCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATAT           <  SRR4302542.2817018/94‑1 (MQ=60)
                                                                                    CTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATAT           <  SRR4302542.2486499/94‑1 (MQ=60)
                                                                                    CTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATAT           >  SRR4302542.3539883/1‑94 (MQ=60)
                                                                                    CTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATAT           <  SRR4302542.6011529/94‑1 (MQ=60)
                                                                                    CTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATAT           >  SRR4302542.6417569/1‑94 (MQ=60)
                                                                                    CTCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATAT           <  SRR4302542.6702647/94‑1 (MQ=60)
                                                                                     TCCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATC          <  SRR4302542.7487987/94‑1 (MQ=60)
                                                                                      CCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCA         <  SRR4302542.5653574/94‑1 (MQ=60)
                                                                                      CCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCA         >  SRR4302542.3792304/1‑94 (MQ=60)
                                                                                      CCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCA         <  SRR4302542.1307790/94‑1 (MQ=60)
                                                                                      CCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCA         <  SRR4302542.818302/94‑1 (MQ=60)
                                                                                      CCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCA         <  SRR4302542.1363571/94‑1 (MQ=60)
                                                                                      CCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCA         <  SRR4302542.2480071/94‑1 (MQ=60)
                                                                                      CCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCA         <  SRR4302542.5571492/94‑1 (MQ=60)
                                                                                      CCATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCA         <  SRR4302542.3748769/94‑1 (MQ=60)
                                                                                       CATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCAT        <  SRR4302542.5658842/94‑1 (MQ=60)
                                                                                       CATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCAT        <  SRR4302542.2392215/94‑1 (MQ=60)
                                                                                        ATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCATC       >  SRR4302542.3940889/1‑94 (MQ=60)
                                                                                        ATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCATC       <  SRR4302542.7138188/94‑1 (MQ=60)
                                                                                        ATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCATC       >  SRR4302542.70757/1‑94 (MQ=60)
                                                                                        ATTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGGCTGCAAAACGGATATCATC       >  SRR4302542.1189426/1‑94 (MQ=60)
                                                                                         TTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCATCG      <  SRR4302542.1236846/94‑1 (MQ=60)
                                                                                         TTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCATCG      <  SRR4302542.5733364/94‑1 (MQ=60)
                                                                                         TTGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCATCG      <  SRR4302542.2170735/94‑1 (MQ=60)
                                                                                          TGGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCATCGA     <  SRR4302542.4621592/94‑1 (MQ=60)
                                                                                           GGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCATCGAT    <  SRR4302542.1825850/94‑1 (MQ=60)
                                                                                           GGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCATCGAT    >  SRR4302542.3236562/1‑94 (MQ=60)
                                                                                           GGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCATCGAT    <  SRR4302542.5581565/94‑1 (MQ=60)
                                                                                           GGCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCATCGAT    <  SRR4302542.3102342/94‑1 (MQ=60)
                                                                                            GCAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCATCGATC   <  SRR4302542.6035860/94‑1 (MQ=60)
                                                                                             CAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCATCGATCA  >  SRR4302542.318322/1‑94 (MQ=60)
                                                                                             CAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCATCGATCA  >  SRR4302542.1123069/1‑94 (MQ=60)
                                                                                             |                                                                                             
ACAACTGGCGAATAGCCATCTTGTGGACGTGGACGAAACGCCCCCATCCAGCGCGGCCGTGCATCTTTACGCCACGGACGCAGACTCCATTGGTAACTGCGGAACGGATCGCGAATTTTGTCCATGTAATCCAATAAGGCGTCATGCATTTTGCTGCGAACGTCTGCAAAACGGATATCATCGATCA  >  NC_000913/3854605‑3854791

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑