Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,881,885	G→A	intergenic (‑528/‑80)	dnaA ← / → rpmH	DnaA/50S ribosomal subunit protein L34

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,881,885	0	G	A	86.1%	863.5 / 85.4	312	intergenic (‑528/‑80)	dnaA/rpmH	DnaA/50S ribosomal subunit protein L34
Reads supporting (aligned to +/- strand): ref base G (22/21); new base A (145/122); total (168/144)
Fisher's exact test for biased strand distribution p-value = 7.43e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 313 total aligned reads displayed.

GCGAAAAGGTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAACGCA  >  NC_000913/3881793‑3881974

gCGAAAAGGTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCGTCTTTAATCACCCATgg                                                                                           >  1:4777707/1‑93 (MQ=255)

  gAAAAGGTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACt                                                                                         >  1:562139/1‑93 (MQ=255)

  gAAAAGGTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACt                                                                                         <  1:2821855/93‑1 (MQ=255)

   aaaaGGTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACtt                                                                                        >  1:5274279/1‑93 (MQ=255)

   aaaaGGTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACtt                                                                                        >  1:800986/1‑93 (MQ=255)

    aaaGGTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTc                                                                                       <  2:6545477/93‑1 (MQ=255)

      aGGTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCgg                                                                                     >  1:6237936/1‑93 (MQ=255)

      aGGTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCgg                                                                                     >  2:6900668/1‑93 (MQ=255)

       ggTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGgt                                                                                    <  2:3258356/93‑1 (MQ=255)

         tGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGgtgt                                                                                  >  2:6045739/1‑93 (MQ=255)

             gAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCAt                                                                              >  1:3110334/1‑93 (MQ=255)

             gAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCAt                                                                              >  2:2169505/1‑93 (MQ=255)

             gAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCAt                                                                              >  2:6155349/1‑93 (MQ=255)

               aaaGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCg                                                                            >  2:3642491/1‑93 (MQ=255)

               aaaGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCg                                                                            >  2:2739336/1‑93 (MQ=255)

                aaGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGt                                                                           >  1:6947857/1‑93 (MQ=255)

                 aGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGtt                                                                          >  1:3935481/1‑93 (MQ=255)

                  gcgcGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGttt                                                                         >  1:4968777/1‑93 (MQ=255)

                  gcgcGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGttt                                                                         >  2:5444749/1‑93 (MQ=255)

                   cgcgGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTc                                                                        >  1:6893787/1‑93 (MQ=255)

                    gcgGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCa                                                                       <  2:5343293/93‑1 (MQ=255)

                    gcgGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCa                                                                       <  1:4568968/93‑1 (MQ=255)

                     cgGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCAt                                                                      <  2:7159274/93‑1 (MQ=255)

                      ggTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCAtt                                                                     >  2:1187749/1‑93 (MQ=255)

                       gTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAGTCACCCATGACTTCGGTGTCCATCGTTTCAttt                                                                    >  2:7260813/1‑93 (MQ=255)

                       gTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCAttt                                                                    >  1:5108823/1‑93 (MQ=255)

                        tAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCAtttt                                                                   <  2:5381606/93‑1 (MQ=255)

                        tAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCAtttt                                                                   <  1:1673219/93‑1 (MQ=255)

                          aaTAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTc                                                                 >  2:6284452/1‑93 (MQ=255)

                          aaTAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTc                                                                 >  2:3583739/1‑93 (MQ=255)

                          aaTAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTc                                                                 >  1:1203318/1‑93 (MQ=255)

                          aaTAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTc                                                                 >  2:7441155/1‑93 (MQ=255)

                           aTAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTcg                                                                >  1:1092180/1‑93 (MQ=255)

                            tAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTcga                                                               <  2:1437026/93‑2 (MQ=255)

                            tAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTcga                                                               >  2:753492/1‑92 (MQ=255)

                            tAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTcga                                                               >  1:3012318/1‑92 (MQ=255)

                             aaGGAAAGAGAATTGTCTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCTCCCATGGCTTCGGTGTCCATCGTTTCATTTTTcggc                                                              <  1:6436449/93‑1 (MQ=255)

                             aaGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTcgac                                                              <  2:2503868/93‑3 (MQ=255)

                              aGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCCCCCATGACTTCGGTGTCCATCGTTTCATTTTTcgacg                                                             <  1:4502154/93‑1 (MQ=255)

                              aGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTcgacg                                                             >  2:3360836/1‑93 (MQ=255)

                              aGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATACGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTcgacg                                                             >  1:2021409/1‑93 (MQ=255)

                               ggAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTcggcgg                                                            >  1:519129/1‑93 (MQ=255)

                                  aaGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGata                                                         >  2:6473116/1‑93 (MQ=255)

                                  aaGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGata                                                         <  1:2631479/93‑1 (MQ=255)

                                   agagAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGatat                                                        >  2:5600928/1‑93 (MQ=255)

                                   agagAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGatat                                                        <  2:6575284/93‑1 (MQ=255)

                                    gagaATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATc                                                       >  1:3713107/1‑93 (MQ=255)

                                       aaTTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCaa                                                    <  1:1423903/93‑1 (MQ=255)

                                        aTTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAAt                                                   <  1:1462107/93‑1 (MQ=255)

                                         ttGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATa                                                  >  2:3990379/1‑93 (MQ=255)

                                           gACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATaaa                                                >  2:4948301/1‑93 (MQ=255)

                                            aCTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAg                                               >  1:6572612/1‑93 (MQ=255)

                                             cTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGc                                              >  2:4440993/1‑93 (MQ=255)

                                             cTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGc                                              <  1:3210998/93‑1 (MQ=255)

                                              tCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGcc                                             >  1:6863934/1‑93 (MQ=255)

                                               ccGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCa                                            <  1:1005473/93‑1 (MQ=255)

                                                 ggAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCAtt                                          >  1:5448972/1‑93 (MQ=255)

                                                 ggAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCAtt                                          <  1:4727984/93‑1 (MQ=255)

                                                 ggAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCAtt                                          >  2:449717/1‑93 (MQ=255)

                                                   aGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGa                                        >  2:1958304/1‑93 (MQ=255)

                                                    gtgtACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGaa                                       <  1:288504/93‑1 (MQ=255)

                                                    gtgtACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGaa                                       <  2:4212818/93‑1 (MQ=255)

                                                     tgtACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAAt                                      >  1:3304035/1‑93 (MQ=255)

                                                     tgtACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAAt                                      >  2:4621719/1‑93 (MQ=255)

                                                     tgtACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAAt                                      >  2:2247603/1‑93 (MQ=255)

                                                      gtACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCATTGAAtt                                     <  2:4144486/93‑1 (MQ=255)

                                                       tACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAAttt                                    >  1:7318810/1‑93 (MQ=255)

                                                          aaTTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTAtt                                 >  2:685981/1‑93 (MQ=255)

                                                          aaTTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTAtt                                 <  2:5889372/93‑1 (MQ=255)

                                                          aaTTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTAtt                                 <  1:6486559/93‑1 (MQ=255)

                                                            ttattaCAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCa                               >  1:6174513/1‑93 (MQ=255)

                                                            ttattaCAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCa                               <  2:1081481/93‑1 (MQ=255)

                                                             tattaCAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCATTGAATTTATTCaa                              <  1:5328323/93‑1 (MQ=255)

                                                               ttaCAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGt                            >  1:2453761/1‑93 (MQ=255)

                                                               ttaCAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGt                            >  2:7384605/1‑93 (MQ=255)

                                                                taCAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGtt                           <  1:6006083/93‑1 (MQ=255)

                                                                taCAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGtt                           <  2:3867803/93‑1 (MQ=255)

                                                                taCAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGtt                           >  2:4064849/1‑93 (MQ=255)

                                                                  cAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTa                         <  2:4896198/93‑1 (MQ=255)

                                                                  cAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTa                         >  1:1152665/1‑93 (MQ=255)

                                                                    aTCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAgg                       >  1:5872019/1‑93 (MQ=255)

                                                                     tCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGt                      >  1:4026545/1‑93 (MQ=255)

                                                                     tCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGt                      <  2:2846380/93‑1 (MQ=255)

                                                                      ccGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTa                     <  2:3198555/93‑1 (MQ=255)

                                                                         gCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGaa                  >  1:568941/1‑93 (MQ=255)

                                                                         gCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGaa                  <  1:3517197/93‑1 (MQ=255)

                                                                         gCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGaa                  >  1:4331488/1‑93 (MQ=255)

                                                                          ccTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGaaa                 >  2:1694058/1‑93 (MQ=255)

                                                                           ctctTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAAt                >  1:5975080/1‑93 (MQ=255)

                                                                            tctTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATc               >  2:6399381/1‑93 (MQ=255)

                                                                            tctTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATc               <  2:2398814/93‑1 (MQ=255)

                                                                              tttAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGc             <  1:3057642/93‑1 (MQ=255)

                                                                                tAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCa           >  1:7103523/1‑93 (MQ=255)

                                                                                     aCCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGaaa      <  1:3419321/93‑1 (MQ=255)

                                                                                     aCCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGaaa      >  2:5220344/1‑93 (MQ=255)

                                                                                     aCCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGaaa      <  1:2227032/93‑1 (MQ=255)

                                                                                     aCCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGaaa      >  1:908898/1‑93 (MQ=255)

                                                                                      cccATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAAc     <  1:4165264/93‑1 (MQ=255)

                                                                                       ccATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAACg    >  1:1859988/1‑93 (MQ=255)

                                                                                       ccATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAACg    <  1:5578553/93‑1 (MQ=255)

GCGAAAAGGTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAACGCA  >  NC_000913/3881793‑3881974

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TGCGAAAAGGTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAACGCACTTT  >  NC_000913/3881792‑3881978

TGCGAAAAGGTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCGTCTTTAATCACCCATGG                                                                                               >  SRR4302542.4824281/1‑94 (MQ=60)

  CGAAAAGGTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACT                                                                                             >  SRR4302542.566983/1‑94 (MQ=60)

   GAAAAGGTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTT                                                                                            >  SRR4302542.5325530/1‑94 (MQ=60)

   GAAAAGGTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTT                                                                                            <  SRR4302542.2848993/94‑1 (MQ=60)

   GAAAAGGTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTT                                                                                            >  SRR4302542.807874/1‑94 (MQ=60)

    AAAAGGTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTC                                                                                           <  SRR4302542.1232172/94‑1 (MQ=60)

     AAAGGTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCG                                                                                          >  SRR4302542.4780149/1‑94 (MQ=60)

     AAAGGTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCG                                                                                          >  SRR4302542.200837/1‑94 (MQ=60)

      AAGGTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGG                                                                                         >  SRR4302542.6299347/1‑94 (MQ=60)

        GGTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTG                                                                                       >  SRR4302542.1462129/1‑94 (MQ=60)

        GGTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTG                                                                                       <  SRR4302542.996887/94‑1 (MQ=60)

         GTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGT                                                                                      <  SRR4302542.6937496/94‑1 (MQ=60)

         GTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGT                                                                                      <  SRR4302542.6261352/94‑1 (MQ=60)

          TGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTC                                                                                     >  SRR4302542.6868418/1‑94 (MQ=60)

          TGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTC                                                                                     >  SRR4302542.3469599/1‑94 (MQ=60)

           GCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCC                                                                                    <  SRR4302542.3968256/94‑1 (MQ=60)

             GGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCAT                                                                                  >  SRR4302542.3139890/1‑94 (MQ=60)

             GGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCAT                                                                                  <  SRR4302542.6007679/94‑1 (MQ=60)

             GGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCAT                                                                                  >  SRR4302542.325614/1‑94 (MQ=60)

              GAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATC                                                                                 <  SRR4302542.1871104/94‑1 (MQ=60)

               AAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCG                                                                                <  SRR4302542.811334/94‑1 (MQ=60)

               AAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCG                                                                                >  SRR4302542.355603/1‑94 (MQ=60)

               AAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCG                                                                                >  SRR4302542.5756442/1‑94 (MQ=60)

               AAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCG                                                                                <  SRR4302542.2886279/94‑1 (MQ=60)

                AAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGT                                                                               >  SRR4302542.7016124/1‑94 (MQ=60)

                 AAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTT                                                                              >  SRR4302542.3974310/1‑94 (MQ=60)

                 AAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTT                                                                              >  SRR4302542.5103946/1‑94 (MQ=60)

                  AGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTT                                                                             >  SRR4302542.5017022/1‑94 (MQ=60)

                  AGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTT                                                                             <  SRR4302542.4584711/94‑1 (MQ=60)

                   GCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTC                                                                            >  SRR4302542.6961481/1‑94 (MQ=60)

                   GCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTC                                                                            <  SRR4302542.3080248/94‑1 (MQ=60)

                    CGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCA                                                                           <  SRR4302542.1022661/94‑1 (MQ=60)

                    CGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCA                                                                           <  SRR4302542.6500172/94‑1 (MQ=60)

                     GCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCAT                                                                          <  SRR4302542.4613694/94‑1 (MQ=60)

                      CGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATT                                                                         >  SRR4302542.5157503/1‑94 (MQ=60)

                       GGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTT                                                                        >  SRR4302542.5158445/1‑94 (MQ=60)

                       GGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTT                                                                        >  SRR4302542.5735528/1‑94 (MQ=60)

                         TAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTT                                                                      >  SRR4302542.952296/1‑94 (MQ=60)

                         TAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTT                                                                      <  SRR4302542.1687680/94‑1 (MQ=60)

                          AAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTC                                                                     >  SRR4302542.5464261/1‑94 (MQ=60)

                          AAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTC                                                                     >  SRR4302542.5670344/1‑94 (MQ=60)

                          AAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTC                                                                     >  SRR4302542.1213668/1‑94 (MQ=60)

                           AATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCG                                                                    <  SRR4302542.4201820/94‑1 (MQ=60)

                           AATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCG                                                                    >  SRR4302542.1101539/1‑94 (MQ=60)

                           AATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCAATGACTTCGGTGTCCATCGTTTCATTTTTCG                                                                    <  SRR4302542.2046337/94‑1 (MQ=60)

                            ATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGA                                                                   >  SRR4302542.3041113/1‑94 (MQ=60)

                            ATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGA                                                                   >  SRR4302542.5803234/1‑94 (MQ=60)

                            ATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGA                                                                   >  SRR4302542.522800/1‑94 (MQ=60)

                             TAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGAC                                                                  <  SRR4302542.4363979/94‑1 (MQ=60)

                             TAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGAC                                                                  <  SRR4302542.7497692/94‑1 (MQ=60)

                              AAGGAAAGAGAATTGTCTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCTCCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCG                                                                 <  SRR4302542.6499852/94‑1 (MQ=60)

                              AAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATACGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACG                                                                 >  SRR4302542.2038894/1‑94 (MQ=60)

                               AGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCCCCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGG                                                                <  SRR4302542.4546303/94‑1 (MQ=60)

                               AGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGG                                                                >  SRR4302542.523623/1‑94 (MQ=60)

                               AGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGG                                                                >  SRR4302542.1176926/1‑94 (MQ=60)

                                 GAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGAT                                                              <  SRR4302542.4743180/94‑1 (MQ=60)

                                 GAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGAT                                                              <  SRR4302542.5659823/94‑1 (MQ=60)

                                  AAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATA                                                             <  SRR4302542.4665419/94‑1 (MQ=60)

                                   AAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATAT                                                            >  SRR4302542.4421580/1‑94 (MQ=60)

                                   AAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATAT                                                            <  SRR4302542.170965/94‑1 (MQ=60)

                                   AAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATAT                                                            <  SRR4302542.824329/94‑1 (MQ=60)

                                   AAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATAT                                                            <  SRR4302542.4094031/94‑1 (MQ=60)

                                   AAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATAT                                                            <  SRR4302542.2656898/94‑1 (MQ=60)

                                   AAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATAT                                                            >  SRR4302542.4182377/1‑94 (MQ=60)

                                    AGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATC                                                           >  SRR4302542.6996297/1‑94 (MQ=60)

                                    AGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATC                                                           >  SRR4302542.3018489/1‑94 (MQ=60)

                                    AGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATC                                                           >  SRR4302542.3749841/1‑94 (MQ=60)

                                      AGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCA                                                         <  SRR4302542.2740838/94‑1 (MQ=60)

                                       GAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAA                                                        >  SRR4302542.6056489/1‑94 (MQ=60)

                                       GAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAA                                                        >  SRR4302542.5545624/1‑94 (MQ=60)

                                        AATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAAT                                                       <  SRR4302542.1436233/94‑1 (MQ=60)

                                         ATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATA                                                      <  SRR4302542.1474731/94‑1 (MQ=60)

                                          TTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAA                                                     <  SRR4302542.3608870/94‑1 (MQ=60)

                                            GACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAG                                                   <  SRR4302542.5317026/94‑1 (MQ=60)

                                            GACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAG                                                   >  SRR4302542.6637378/1‑94 (MQ=60)

                                            GACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAG                                                   <  SRR4302542.5347913/94‑1 (MQ=60)

                                            GACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAACCCCCCAGGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAG                                                   <  SRR4302542.1171824/94‑1 (MQ=60)

                                              CTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCC                                                 >  SRR4302542.6931370/1‑94 (MQ=60)

                                              CTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCC                                                 <  SRR4302542.3241395/94‑1 (MQ=60)

                                                CCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCCCCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCAT                                               <  SRR4302542.3226228/94‑1 (MQ=60)

                                                CCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCAT                                               >  SRR4302542.3035189/1‑94 (MQ=60)

                                                CCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCAT                                               <  SRR4302542.110671/94‑1 (MQ=60)

                                                CCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCAT                                               <  SRR4302542.1014132/94‑1 (MQ=60)

                                                 CGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCATT                                              >  SRR4302542.5501912/1‑94 (MQ=60)

                                                 CGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATT                                              >  SRR4302542.3342921/1‑94 (MQ=60)

                                                  GGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCATTG                                             <  SRR4302542.4774088/94‑1 (MQ=60)

                                                  GGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTG                                             >  SRR4302542.6972652/1‑94 (MQ=60)

                                                  GGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTG                                             >  SRR4302542.1101832/1‑94 (MQ=60)

                                                  GGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTG                                             <  SRR4302542.7158566/94‑1 (MQ=60)

                                                    AGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCATTGAA                                           <  SRR4302542.6542652/94‑1 (MQ=60)

                                                    AGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAA                                           <  SRR4302542.7462906/94‑1 (MQ=60)

                                                     GTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAAT                                          <  SRR4302542.291020/94‑1 (MQ=60)

                                                     GTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAAT                                          >  SRR4302542.6054960/1‑94 (MQ=60)

                                                     GTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAAT                                          >  SRR4302542.402547/1‑94 (MQ=60)

                                                     GTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAAT                                          <  SRR4302542.5100636/94‑1 (MQ=60)

                                                     GTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAAT                                          >  SRR4302542.3335198/1‑94 (MQ=60)

                                                      TGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATT                                         >  SRR4302542.6576890/1‑94 (MQ=60)

                                                      TGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATT                                         >  SRR4302542.6380549/1‑94 (MQ=60)

                                                      TGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATT                                         >  SRR4302542.199290/1‑94 (MQ=60)

                                                      TGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATT                                         <  SRR4302542.3113168/94‑1 (MQ=60)

                                                       GTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCATTGAATTT                                        >  SRR4302542.6795312/1‑94 (MQ=60)

                                                       GTACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTT                                        >  SRR4302542.7390490/1‑94 (MQ=60)

                                                         ACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTAT                                      >  SRR4302542.2641141/1‑94 (MQ=60)

                                                         ACAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTAT                                      <  SRR4302542.4822560/94‑1 (MQ=60)

                                                          CAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATT                                     <  SRR4302542.528750/94‑1 (MQ=60)

                                                          CAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATT                                     <  SRR4302542.4529154/94‑1 (MQ=60)

                                                          CAATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATT                                     >  SRR4302542.4289515/1‑94 (MQ=60)

                                                           AATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTC                                    <  SRR4302542.6550474/94‑1 (MQ=60)

                                                            ATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCA                                   <  SRR4302542.2101311/94‑1 (MQ=60)

                                                            ATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCA                                   <  SRR4302542.6360557/94‑1 (MQ=60)

                                                            ATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCA                                   >  SRR4302542.6234365/1‑94 (MQ=60)

                                                            ATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCA                                   >  SRR4302542.3328840/1‑94 (MQ=60)

                                                            ATTATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCA                                   >  SRR4302542.5436190/1‑94 (MQ=60)

                                                              TATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCATTGAATTTATTCAAG                                 <  SRR4302542.5380089/94‑1 (MQ=60)

                                                              TATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAG                                 <  SRR4302542.3107371/94‑1 (MQ=60)

                                                               ATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGT                                >  SRR4302542.2477622/1‑94 (MQ=60)

                                                               ATTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGT                                >  SRR4302542.3048455/1‑94 (MQ=60)

                                                                TTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTT                               <  SRR4302542.5690393/94‑1 (MQ=60)

                                                                TTACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTT                               <  SRR4302542.6715118/94‑1 (MQ=60)

                                                                 TACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTT                              <  SRR4302542.2370399/94‑1 (MQ=60)

                                                                 TACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTT                              <  SRR4302542.6064245/94‑1 (MQ=60)

                                                                  ACAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTA                             >  SRR4302542.1162545/1‑94 (MQ=60)

                                                                   CAATCCGGCCTCTTTAATCACCCATGCCTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAG                            <  SRR4302542.6243128/94‑1 (MQ=60)

                                                                   CAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAG                            <  SRR4302542.1915056/94‑1 (MQ=60)

                                                                   CAATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAG                            <  SRR4302542.4948975/94‑1 (MQ=60)

                                                                    AATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGG                           >  SRR4302542.5928947/1‑94 (MQ=60)

                                                                     ATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGT                          <  SRR4302542.4562877/94‑1 (MQ=60)

                                                                     ATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGT                          >  SRR4302542.5213947/1‑94 (MQ=60)

                                                                     ATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGT                          >  SRR4302542.4066267/1‑94 (MQ=60)

                                                                     ATCCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGT                          >  SRR4302542.1629018/1‑94 (MQ=60)

                                                                       CCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAG                        >  SRR4302542.5981546/1‑94 (MQ=60)

                                                                       CCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAG                        >  SRR4302542.7317141/1‑94 (MQ=60)

                                                                       CCGGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAG                        <  SRR4302542.3940458/94‑1 (MQ=60)

                                                                         GGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAA                      >  SRR4302542.573832/1‑94 (MQ=60)

                                                                         GGCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAA                      >  SRR4302542.4374062/1‑94 (MQ=60)

                                                                          GCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAA                     <  SRR4302542.2503451/94‑1 (MQ=60)

                                                                          GCCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAA                     <  SRR4302542.3550081/94‑1 (MQ=60)

                                                                           CCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAAT                    >  SRR4302542.4896060/1‑94 (MQ=60)

                                                                           CCTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAAT                    >  SRR4302542.6032912/1‑94 (MQ=60)

                                                                            CTCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATC                   >  SRR4302542.5792187/1‑94 (MQ=60)

                                                                             TCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCG                  <  SRR4302542.620367/94‑1 (MQ=60)

                                                                             TCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCG                  <  SRR4302542.2888092/94‑1 (MQ=60)

                                                                             TCTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCG                  >  SRR4302542.146276/1‑94 (MQ=60)

                                                                              CTTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGC                 >  SRR4302542.606657/1‑94 (MQ=60)

                                                                               TTTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCC                <  SRR4302542.3086807/94‑1 (MQ=60)

                                                                                TTAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCA               >  SRR4302542.7173252/1‑94 (MQ=60)

                                                                                 TAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCAT              >  SRR4302542.7031075/1‑94 (MQ=60)

                                                                                 TAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCAT              <  SRR4302542.7388848/94‑1 (MQ=60)

                                                                                 TAATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCAT              >  SRR4302542.3144710/1‑94 (MQ=60)

                                                                                  AATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATG             >  SRR4302542.6635439/1‑94 (MQ=60)

                                                                                  AATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATG             <  SRR4302542.3125337/94‑1 (MQ=60)

                                                                                  AATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATG             >  SRR4302542.4020135/1‑94 (MQ=60)

                                                                                  AATCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATG             >  SRR4302542.1382109/1‑94 (MQ=60)

                                                                                   ATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGA            <  SRR4302542.1499447/94‑1 (MQ=60)

                                                                                    TCACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAA           <  SRR4302542.3465819/94‑1 (MQ=60)

                                                                                     CACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAA          <  SRR4302542.3343487/94‑1 (MQ=60)

                                                                                     CACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAA          >  SRR4302542.916741/1‑94 (MQ=60)

                                                                                      ACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAAC         <  SRR4302542.3451361/94‑1 (MQ=60)

                                                                                      ACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAAC         <  SRR4302542.2246195/94‑1 (MQ=60)

                                                                                      ACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAAC         >  SRR4302542.5538388/1‑94 (MQ=60)

                                                                                      ACCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAAC         >  SRR4302542.2439746/1‑94 (MQ=60)

                                                                                       CCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAACG        >  SRR4302542.1876060/1‑94 (MQ=60)

                                                                                       CCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAACG        <  SRR4302542.1032677/94‑1 (MQ=60)

                                                                                       CCCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAACG        <  SRR4302542.4206340/94‑1 (MQ=60)

                                                                                        CCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAACGC       >  SRR4302542.5372667/1‑94 (MQ=60)

                                                                                        CCATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAACGC       <  SRR4302542.5632765/94‑1 (MQ=60)

                                                                                         CATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAACGCA      >  SRR4302542.6959590/1‑94 (MQ=60)

                                                                                         CATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAACGCA      >  SRR4302542.284310/1‑94 (MQ=60)

                                                                                          ATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAACGCAC     >  SRR4302542.3188332/1‑94 (MQ=60)

                                                                                          ATGACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAACGCAC     >  SRR4302542.1738816/1‑94 (MQ=60)

                                                                                            GACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAACGCACTT   >  SRR4302542.3864340/1‑94 (MQ=60)

                                                                                            GACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAACGCACTT   <  SRR4302542.7490467/94‑1 (MQ=60)

                                                                                             ACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAACGCACTTT  <  SRR4302542.3879289/94‑1 (MQ=60)

                                                                                             ACTTCGGTGTCCATCGTTTCATTTTTCGACGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAACGCACTTT  >  SRR4302542.806077/1‑94 (MQ=60)

TGCGAAAAGGTGCGGAAAAGCGCGGTAAATAAGGAAAGAGAATTGACTCCGGAGTGTACAATTATTACAATCCGGCCTCTTTAATCACCCATGGCTTCGGTGTCCATCGTTTCATTTTTCGGCGGATATCCAATAAAGCCATTGAATTTATTCAAGTTTAGGTAGAAATCGCCATGAAACGCACTTT  >  NC_000913/3881792‑3881978

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`