Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,897,358 |
T→C |
Y294C (TAC→TGC) |
yieL ← |
putative xylanase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,897,358 | 0 | T | C | 89.1%
| 729.1
/ 70.3
| 294 | Y294C (TAC→TGC) | yieL | putative xylanase |
| Reads supporting (aligned to +/- strand): ref base T (17/15); new base C (121/141); total (138/156) |
| Fisher's exact test for biased strand distribution p-value = 5.74e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.38e-01 |
Only 100 of 295 total aligned reads displayed.
CTTCATCCGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGTTC > NC_000913/3897266‑3897447
|
cTTCATCCGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGt > 2:6193543/1‑93 (MQ=255)
tCATCCGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGTAc > 2:5702237/1‑93 (MQ=255)
ggTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCt < 1:5179673/93‑1 (MQ=255)
ggTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCt > 1:5532340/1‑93 (MQ=255)
ggTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCt < 2:6628555/93‑1 (MQ=255)
ggTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCt > 1:2488655/1‑93 (MQ=255)
ggTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCCCCTGGCACCCGCCt < 2:5196765/93‑1 (MQ=255)
gTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGTACCCGCCtt < 1:6576941/93‑1 (MQ=255)
gTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCtt < 2:1506289/93‑1 (MQ=255)
cGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTtgtg > 1:7065697/1‑93 (MQ=255)
ggTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGa > 1:2230592/1‑93 (MQ=255)
gTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGaa < 1:1826030/93‑1 (MQ=255)
ttGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGaaa > 2:1341420/1‑93 (MQ=255)
gTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGc > 2:2431387/1‑93 (MQ=255)
tCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGcc < 1:7414346/93‑1 (MQ=255)
cGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGTACCCGCCTTGTGAAAGccc < 2:6977235/93‑1 (MQ=255)
cGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGccc < 2:4671956/93‑1 (MQ=255)
gTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCt < 1:2862932/93‑1 (MQ=255)
gTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCt > 1:1450869/1‑93 (MQ=255)
tGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTg > 2:3201277/1‑93 (MQ=255)
ggTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGc > 1:2643154/1‑93 (MQ=255)
ggTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGc < 2:919268/93‑1 (MQ=255)
gTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGcc > 1:5317125/1‑93 (MQ=255)
tAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCa < 2:1936472/93‑1 (MQ=255)
acacCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAgc < 1:3250364/93‑1 (MQ=255)
acacCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAgc > 1:7238926/1‑93 (MQ=255)
acTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGcgcgcg > 2:3304150/1‑93 (MQ=255)
tGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGc > 1:2998673/1‑93 (MQ=255)
tGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGc > 1:4557941/1‑93 (MQ=255)
tGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGc > 2:7449831/1‑93 (MQ=255)
aaTGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCa > 2:160156/1‑93 (MQ=255)
tgtgGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATc > 2:4800263/1‑93 (MQ=255)
tgtgGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATc < 1:4037496/93‑1 (MQ=255)
tgtgGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATc < 2:4562002/93‑1 (MQ=255)
tgGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCgg < 2:2068245/93‑1 (MQ=255)
gccagccagccaAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCa > 2:379118/1‑93 (MQ=255)
gccagccagccaAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCa < 1:7500952/93‑1 (MQ=255)
gccagccagccaAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCa < 2:4153063/93‑1 (MQ=255)
gccagccagccaAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCa < 2:7301942/93‑1 (MQ=255)
gccagccaAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCtt > 1:1156787/1‑93 (MQ=255)
gccagccaAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCtt < 2:2479897/93‑1 (MQ=255)
cagccaAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTa > 2:5159540/1‑93 (MQ=255)
gccaAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACg > 2:4591682/1‑93 (MQ=255)
ccaAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACgg > 1:5927581/1‑93 (MQ=255)
caAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGa < 2:1434891/93‑1 (MQ=255)
caAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGa < 2:4018152/93‑1 (MQ=255)
aaaGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGAc < 1:378649/93‑1 (MQ=255)
aaGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACa > 1:3558898/1‑93 (MQ=255)
aaGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACa > 1:2309172/1‑93 (MQ=255)
aaGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACa < 1:1589946/93‑1 (MQ=255)
aGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACAt > 2:4219986/1‑93 (MQ=255)
cTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTa > 1:4100962/1‑93 (MQ=255)
cTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTa < 2:5516374/93‑1 (MQ=255)
tttCCAGATGATTCATTCCGGAAACCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTaa > 1:2537004/1‑93 (MQ=255)
tttCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTaa < 2:982015/93‑1 (MQ=255)
tttCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTaa < 1:4191703/93‑1 (MQ=255)
ttCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTaaa < 1:3398970/93‑1 (MQ=255)
ccAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAAc < 2:7193197/93‑1 (MQ=255)
cAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACg < 1:3936355/93‑1 (MQ=255)
aGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGc < 1:1365698/93‑1 (MQ=255)
aGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGc > 1:1543018/1‑93 (MQ=255)
gatgatTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCt < 1:7363361/93‑1 (MQ=255)
gatgatTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCt > 2:1814295/1‑93 (MQ=255)
gatgatTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCt < 2:2897859/93‑1 (MQ=255)
atgatTCATTCCGGAACCCAGCGCCTGGCCCCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCtt < 1:6137237/93‑1 (MQ=255)
atgatTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCtt < 2:1159344/93‑1 (MQ=255)
tgatTCATTCCGGAAACCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTg < 2:1057763/93‑1 (MQ=255)
tgatTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTg > 1:6830606/1‑93 (MQ=255)
tgatTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTg < 2:5913545/93‑1 (MQ=255)
gatTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGc > 2:4064515/1‑93 (MQ=255)
attcattcCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCt > 1:429819/1‑93 (MQ=255)
attcattcCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCt > 1:1280359/1‑93 (MQ=255)
ttcattcCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTa > 2:5002157/1‑93 (MQ=255)
ttcattcCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTa > 1:2190447/1‑93 (MQ=255)
tcattcCGGAAACCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTaa < 1:1956329/93‑1 (MQ=255)
tcattcCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTaa < 1:3221242/93‑1 (MQ=255)
tcattcCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTaa < 2:1110502/93‑1 (MQ=255)
attcCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATc < 1:5472056/93‑1 (MQ=255)
attcCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATc < 2:3652790/93‑1 (MQ=255)
attcCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATc < 2:5392006/93‑1 (MQ=255)
ttcCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCa > 1:481996/1‑93 (MQ=255)
ttcCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCa < 1:6293453/93‑1 (MQ=255)
ttcCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCa < 1:2780664/93‑1 (MQ=255)
ttcCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCa > 1:3651941/1‑93 (MQ=255)
tcCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAg < 1:5655676/93‑1 (MQ=255)
ccGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGc < 2:4509254/93‑1 (MQ=255)
ggAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCgg < 1:5682417/93‑1 (MQ=255)
gAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCggg > 1:4925690/1‑93 (MQ=255)
gAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCggg > 1:6691855/1‑93 (MQ=255)
aaCCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGat > 2:2740169/1‑93 (MQ=255)
aCCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGata > 1:3086790/1‑93 (MQ=255)
aCCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGata < 1:1886299/93‑1 (MQ=255)
ccAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGataa < 2:7065697/93‑1 (MQ=255)
cAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGataat > 2:6310991/1‑93 (MQ=255)
aGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGataata > 1:1494962/1‑93 (MQ=255)
cgcCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATc < 2:3506737/93‑1 (MQ=255)
cgcCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATc > 1:6199524/1‑93 (MQ=255)
ccTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGt < 1:576584/93‑1 (MQ=255)
cTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGtt > 1:6017984/1‑93 (MQ=255)
tGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGTtc < 1:5119927/93‑1 (MQ=255)
|
CTTCATCCGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGTTC > NC_000913/3897266‑3897447
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTTCATCCGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGTTCATCA > NC_000913/3897266‑3897451
|
CTTCATCCGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCA > SRR4302542.438349/1‑94 (MQ=60)
TTCATCCGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCAC > SRR4302542.7432173/1‑94 (MQ=60)
CATCCGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCC < SRR4302542.4048048/94‑1 (MQ=60)
ATCCGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCG < SRR4302542.5726925/94‑1 (MQ=60)
ATCCGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCG < SRR4302542.1429158/94‑1 (MQ=60)
ATCCGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCG > SRR4302542.2809654/1‑94 (MQ=60)
ATCCGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCG > SRR4302542.5282483/1‑94 (MQ=60)
CCGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCC > SRR4302542.6322042/1‑94 (MQ=60)
CGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCT > SRR4302542.5586114/1‑94 (MQ=60)
CGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCT > SRR4302542.2512801/1‑94 (MQ=60)
GGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGTACCCGCCTT < SRR4302542.1600299/94‑1 (MQ=60)
GGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTT < SRR4302542.5230003/94‑1 (MQ=60)
GGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTT > SRR4302542.5903321/1‑94 (MQ=60)
GGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTT < SRR4302542.5684784/94‑1 (MQ=60)
GTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGTACCCGCCTTG < SRR4302542.6641751/94‑1 (MQ=60)
GTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTG > SRR4302542.5442573/1‑94 (MQ=60)
TACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGT > SRR4302542.1365125/1‑94 (MQ=60)
ACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTG < SRR4302542.367402/94‑1 (MQ=60)
ACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTG > SRR4302542.7135051/1‑94 (MQ=60)
CGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGA > SRR4302542.1916370/1‑94 (MQ=60)
CGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGA > SRR4302542.2249784/1‑94 (MQ=60)
GGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAA > SRR4302542.3179483/1‑94 (MQ=60)
GTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAA < SRR4302542.1841843/94‑1 (MQ=60)
TTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAG < SRR4302542.4884835/94‑1 (MQ=60)
TGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGC > SRR4302542.6605699/1‑94 (MQ=60)
GTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCC > SRR4302542.2693584/1‑94 (MQ=60)
TCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCC < SRR4302542.7486901/94‑1 (MQ=60)
CGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCT > SRR4302542.1463389/1‑94 (MQ=60)
GTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTG < SRR4302542.2384818/94‑1 (MQ=60)
GTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTG < SRR4302542.2890436/94‑1 (MQ=60)
TGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGC > SRR4302542.2668682/1‑94 (MQ=60)
GGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCC > SRR4302542.3638800/1‑94 (MQ=60)
GGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCC > SRR4302542.5368778/1‑94 (MQ=60)
TAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAG > SRR4302542.6653200/1‑94 (MQ=60)
AACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGC > SRR4302542.7309926/1‑94 (MQ=60)
AACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGC < SRR4302542.2000549/94‑1 (MQ=60)
ACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCG < SRR4302542.3281076/94‑1 (MQ=60)
CACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGC < SRR4302542.3941840/94‑1 (MQ=60)
CACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGC > SRR4302542.1876807/1‑94 (MQ=60)
ACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCG > SRR4302542.1480869/1‑94 (MQ=60)
ACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCG > SRR4302542.6270223/1‑94 (MQ=60)
CACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCG < SRR4302542.7498325/94‑1 (MQ=60)
ACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGTACCCGCATTGTGAAAGCCCTGCCAGCGCGCGG < SRR4302542.4288652/94‑1 (MQ=60)
CTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGC > SRR4302542.4602534/1‑94 (MQ=60)
CTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGC > SRR4302542.3027362/1‑94 (MQ=60)
TGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCC > SRR4302542.3542091/1‑94 (MQ=60)
TGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCC < SRR4302542.1364176/94‑1 (MQ=60)
TGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCC > SRR4302542.2962626/1‑94 (MQ=60)
TGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCC < SRR4302542.5840248/94‑1 (MQ=60)
TGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCC < SRR4302542.3783245/94‑1 (MQ=60)
TGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCC > SRR4302542.157579/1‑94 (MQ=60)
AATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCAT < SRR4302542.4104651/94‑1 (MQ=60)
ATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATC > SRR4302542.2695884/1‑94 (MQ=60)
TGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCG > SRR4302542.744092/1‑94 (MQ=60)
TGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCG < SRR4302542.5119881/94‑1 (MQ=60)
TGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCG < SRR4302542.1912678/94‑1 (MQ=60)
TGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCG < SRR4302542.4077336/94‑1 (MQ=60)
GTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGG < SRR4302542.5254684/94‑1 (MQ=60)
GTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGG < SRR4302542.921792/94‑1 (MQ=60)
TGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGC < SRR4302542.6190123/94‑1 (MQ=60)
GCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT < SRR4302542.7574733/94‑1 (MQ=60)
CCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑C < SRR4302542.1613262/94‑1 (MQ=60)
CAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CT < SRR4302542.1466157/94‑1 (MQ=60)
CAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CT < SRR4302542.6896959/94‑1 (MQ=60)
CAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CT > SRR4302542.1878824/1‑94 (MQ=60)
AGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTT > SRR4302542.4618675/1‑94 (MQ=60)
AGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTT < SRR4302542.4008993/94‑1 (MQ=60)
AGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTT > SRR4302542.1166701/1‑94 (MQ=60)
AGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTT < SRR4302542.2601056/94‑1 (MQ=60)
GCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTT < SRR4302542.4272268/94‑1 (MQ=60)
CCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTA < SRR4302542.1534138/94‑1 (MQ=60)
CAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTAC < SRR4302542.1606463/94‑1 (MQ=60)
GCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGG > SRR4302542.5985018/1‑94 (MQ=60)
CCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGA > SRR4302542.6039001/1‑94 (MQ=60)
CCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGA > SRR4302542.7354315/1‑94 (MQ=60)
CCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGA < SRR4302542.571061/94‑1 (MQ=60)
CAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGAC > SRR4302542.2549196/1‑94 (MQ=60)
AAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACA > SRR4302542.2328998/1‑94 (MQ=60)
AAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACA > SRR4302542.3592137/1‑94 (MQ=60)
AAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACA > SRR4302542.5526131/1‑94 (MQ=60)
AAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACA < SRR4302542.3359169/94‑1 (MQ=60)
AAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACA < SRR4302542.381941/94‑1 (MQ=60)
AAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACAT < SRR4302542.1603672/94‑1 (MQ=60)
AAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACAT < SRR4302542.6036326/94‑1 (MQ=60)
AGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATT < SRR4302542.5784828/94‑1 (MQ=60)
GCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTA > SRR4302542.3029608/1‑94 (MQ=60)
GCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTA > SRR4302542.4141401/1‑94 (MQ=60)
GCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTA > SRR4302542.3108941/1‑94 (MQ=60)
CTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAA < SRR4302542.327363/94‑1 (MQ=60)
CTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAA > SRR4302542.2561609/1‑94 (MQ=60)
CTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCCTTTACGGACATTA > SRR4302542.5010851/1‑94 (MQ=60)
CTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAA < SRR4302542.5686352/94‑1 (MQ=60)
CTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAA > SRR4302542.6780823/1‑94 (MQ=60)
TTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAA < SRR4302542.2226868/94‑1 (MQ=60)
TTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAA < SRR4302542.4233034/94‑1 (MQ=60)
TTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAA < SRR4302542.2246946/94‑1 (MQ=60)
TTCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAA < SRR4302542.3430850/94‑1 (MQ=60)
TCCAGATGATTCATTCCGGAAACCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAAC > SRR4302542.6442584/1‑94 (MQ=60)
TCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAAC < SRR4302542.4230131/94‑1 (MQ=60)
TCCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAAC < SRR4302542.1239422/94‑1 (MQ=60)
TCCAGATGATTCATTCCGGAAACCAGCCCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAAC < SRR4302542.2205105/94‑1 (MQ=60)
CCAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACG > SRR4302542.2574456/1‑94 (MQ=60)
CAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGC > SRR4302542.881323/1‑94 (MQ=60)
CAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGC < SRR4302542.3975193/94‑1 (MQ=60)
CAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGC > SRR4302542.1556335/1‑94 (MQ=60)
CAGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGC > SRR4302542.2315600/1‑94 (MQ=60)
AGATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCT < SRR4302542.1377500/94‑1 (MQ=60)
GATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTT < SRR4302542.4881216/94‑1 (MQ=60)
GATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTT < SRR4302542.7435485/94‑1 (MQ=60)
agtATTCATTCCGGAAACCAGCGCCTGGCCACCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTG < SRR4302542.3499195/91‑1 (MQ=60)
ATGATTCATTCCGGAACCCAGCGCCTGGCCCCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTG < SRR4302542.6196616/94‑1 (MQ=60)
ATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTG < SRR4302542.3003200/94‑1 (MQ=60)
ATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTG > SRR4302542.6251730/1‑94 (MQ=60)
ATGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTG > SRR4302542.6897735/1‑94 (MQ=60)
TGATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGC < SRR4302542.1526128/94‑1 (MQ=60)
GATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCT < SRR4302542.4343748/94‑1 (MQ=60)
GATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCT > SRR4302542.433531/1‑94 (MQ=60)
GATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCT > SRR4302542.5187139/1‑94 (MQ=60)
GATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCT > SRR4302542.1291383/1‑94 (MQ=60)
ATTCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTA > SRR4302542.2209310/1‑94 (MQ=60)
TCATTCCGGAAACCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAAT < SRR4302542.1973245/94‑1 (MQ=60)
TCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAAT < SRR4302542.3248496/94‑1 (MQ=60)
TCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAAT < SRR4302542.3813244/94‑1 (MQ=60)
TCATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAAT < SRR4302542.3251729/94‑1 (MQ=60)
CATTCCGGAAACCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATC < SRR4302542.4842675/94‑1 (MQ=60)
CATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATC > SRR4302542.5215398/1‑94 (MQ=60)
ATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCA < SRR4302542.3399451/94‑1 (MQ=60)
ATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCA < SRR4302542.5525220/94‑1 (MQ=60)
ATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCA > SRR4302542.2290829/1‑94 (MQ=60)
ATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCA > SRR4302542.3686086/1‑94 (MQ=60)
ATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCA > SRR4302542.486173/1‑94 (MQ=60)
ATTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCA > SRR4302542.5549076/1‑94 (MQ=60)
TTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAG < SRR4302542.2807440/94‑1 (MQ=60)
TTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAG < SRR4302542.6355460/94‑1 (MQ=60)
TTCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAG < SRR4302542.6666474/94‑1 (MQ=60)
TCCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGC < SRR4302542.5710579/94‑1 (MQ=60)
CCGGAAACCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCG < SRR4302542.3835576/94‑1 (MQ=60)
CCGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCG < SRR4302542.7173454/94‑1 (MQ=60)
CGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGG < SRR4302542.6257365/94‑1 (MQ=60)
CGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGG < SRR4302542.4155391/94‑1 (MQ=60)
CGGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGG < SRR4302542.2535089/94‑1 (MQ=60)
GGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGG < SRR4302542.5737594/94‑1 (MQ=60)
GGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGG > SRR4302542.6757772/1‑94 (MQ=60)
GGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGG > SRR4302542.1399477/1‑94 (MQ=60)
GGAAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGG > SRR4302542.4973571/1‑94 (MQ=60)
AAACCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGAT > SRR4302542.4109116/1‑94 (MQ=60)
AAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGAT > SRR4302542.704096/1‑94 (MQ=60)
AAACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCACGGGGAT > SRR4302542.4355440/1‑94 (MQ=60)
AACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATA > SRR4302542.7004957/1‑94 (MQ=60)
AACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATA > SRR4302542.6122712/1‑94 (MQ=60)
AACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATA > SRR4302542.3116170/1‑94 (MQ=60)
ACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAA < SRR4302542.1902632/94‑1 (MQ=60)
ACCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAA > SRR4302542.7272831/1‑94 (MQ=60)
CCAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAAT < SRR4302542.544907/94‑1 (MQ=60)
CAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATA > SRR4302542.7449471/1‑94 (MQ=60)
CAGCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATA > SRR4302542.1507890/1‑94 (MQ=60)
GCGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATC > SRR4302542.6260120/1‑94 (MQ=60)
CGCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCG > SRR4302542.7571017/1‑94 (MQ=60)
GCCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGT < SRR4302542.2340640/94‑1 (MQ=60)
CCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGTT < SRR4302542.581537/94‑1 (MQ=60)
CCTGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGTT > SRR4302542.6076264/1‑94 (MQ=60)
TGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGTTCA < SRR4302542.5169644/94‑1 (MQ=60)
TGGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGTTCA > SRR4302542.1099047/1‑94 (MQ=60)
GGCACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGACAATATCGTTCAT < SRR4302542.60006/94‑1 (MQ=60)
TACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGTTCATCA > SRR4302542.374630/1‑94 (MQ=60)
CACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGTTCATCA > SRR4302542.7437928/1‑94 (MQ=60)
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CTTCATCCGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCAT‑CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGTTCATCA > NC_000913/3897266‑3897451
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
