Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,899,440 T→C T137A (ACC→GCC)  yieC ← putative receptor protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,899,4400TC83.8% 677.2 / 127.0 315T137A (ACC→GCC) yieCputative receptor protein
Reads supporting (aligned to +/- strand):  ref base T (26/25);  new base C (117/146);  total (143/172)
Fisher's exact test for biased strand distribution p-value = 4.44e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.54e-04

Only 100 of 323 total aligned reads displayed.

TAACTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAA  >  NC_000913/3899351‑3899532
                                                                                          |                                                                                            
 aaCTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑Tcccc                                                                                          >  1:4346364/1‑93 (MQ=255)
    tGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCaa                                                                                       <  2:2045681/93‑1 (MQ=255)
    tGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCaa                                                                                       >  1:6829728/1‑93 (MQ=255)
     gCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAAc                                                                                      <  1:1304096/93‑1 (MQ=255)
     gCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAAc                                                                                      <  2:6128038/93‑1 (MQ=255)
      cAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAAcc                                                                                     <  2:5892191/93‑1 (MQ=255)
       aaaTCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCa                                                                                    >  2:567556/1‑93 (MQ=255)
       aaaTCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCa                                                                                    >  1:4638087/1‑93 (MQ=255)
        aaTCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAg                                                                                   >  2:4642501/1‑93 (MQ=255)
        aaTCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAg                                                                                   >  2:411402/1‑93 (MQ=255)
          tCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGaa                                                                                 <  2:2890836/93‑1 (MQ=255)
          tCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGaa                                                                                 <  1:7381855/93‑1 (MQ=255)
          tCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGaa                                                                                 >  2:1831751/1‑93 (MQ=255)
          acacaCCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGaa                                                                                 <  1:2587790/89‑1 (MQ=255)
            aaaCCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACg                                                                               >  2:6338241/1‑93 (MQ=255)
            aaaCCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACg                                                                               <  1:2056929/93‑1 (MQ=255)
             aaCCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACgg                                                                              >  2:3122319/1‑93 (MQ=255)
             aaCCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACgg                                                                              >  2:7472859/1‑93 (MQ=255)
              aCCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGt                                                                             >  2:7029839/1‑93 (MQ=255)
              aCCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGt                                                                             >  1:3589554/1‑93 (MQ=255)
               ccAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTa                                                                            <  1:7041696/93‑1 (MQ=255)
                cAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTaa                                                                           <  2:1749099/93‑1 (MQ=255)
                  gCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATa                                                                         >  1:6322870/1‑93 (MQ=255)
                  gCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATa                                                                         <  1:6288653/93‑1 (MQ=255)
                    cGGAGTGTTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGc                                                                       >  1:1957970/1‑93 (MQ=255)
                     ggAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGcc                                                                      <  1:5819268/93‑1 (MQ=255)
                     ggAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGcc                                                                      >  2:6730601/1‑93 (MQ=255)
                       aGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGt                                                                    <  1:7221040/93‑1 (MQ=255)
                        gTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGtt                                                                   >  2:862948/1‑93 (MQ=255)
                        gTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGtt                                                                   <  1:668483/93‑1 (MQ=255)
                         tATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTg                                                                  <  2:5768220/93‑1 (MQ=255)
                          aTTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGt                                                                 <  1:7448668/93‑1 (MQ=255)
                           ttCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCGTTGTa                                                                >  2:1019213/1‑93 (MQ=255)
                           ttCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCGTTGTa                                                                >  1:3044047/1‑93 (MQ=255)
                           ttCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTa                                                                >  1:7272395/1‑93 (MQ=255)
                            tCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTaa                                                               >  2:3616699/1‑93 (MQ=255)
                            tCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTaa                                                               >  1:2952607/1‑93 (MQ=255)
                            tCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTaa                                                               <  1:2516794/93‑1 (MQ=255)
                              gTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACt                                                             <  1:3156447/93‑1 (MQ=255)
                               ttACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCGTTGTAACTa                                                            >  2:5390479/1‑93 (MQ=255)
                               ttACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTa                                                            >  2:2109568/1‑93 (MQ=255)
                                tACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTaa                                                           <  2:4499958/93‑1 (MQ=255)
                                tACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTaa                                                           <  1:6795508/93‑1 (MQ=255)
                                 aCCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTaaa                                                          >  1:3010763/1‑93 (MQ=255)
                                   cAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGc                                                        <  2:7322347/93‑1 (MQ=255)
                                   cAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGc                                                        <  1:3756464/93‑1 (MQ=255)
                                   cAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGc                                                        >  2:5493539/1‑93 (MQ=255)
                                     aaGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCa                                                      >  2:681087/1‑93 (MQ=255)
                                      aGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCaa                                                     >  1:5104146/1‑93 (MQ=255)
                                       gCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAAt                                                    <  2:3537302/93‑1 (MQ=255)
                                       gCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAAt                                                    <  1:3314695/93‑1 (MQ=255)
                                         ggCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAAttt                                                  <  1:1140797/93‑1 (MQ=255)
                                         ggCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAAttt                                                  >  2:6534023/1‑93 (MQ=255)
                                          gCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTc                                                 >  2:1189860/1‑93 (MQ=255)
                                          gCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTc                                                 >  2:4911411/1‑93 (MQ=255)
                                             cAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCAt                                               >  1:2697189/1‑93 (MQ=255)
                                             cAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCGAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATc                                              <  2:299118/93‑1 (MQ=255)
                                             cAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATc                                              <  1:2044559/93‑1 (MQ=255)
                                             cAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATc                                              <  2:4334217/93‑1 (MQ=255)
                                             cAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATc                                              <  2:370570/93‑1 (MQ=255)
                                              agagAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCt                                             >  2:2402400/1‑93 (MQ=255)
                                               gagaACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCtt                                            >  2:1520257/1‑93 (MQ=255)
                                               gagaACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCtt                                            >  1:5550168/1‑93 (MQ=255)
                                                agaACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCttt                                           >  2:5605952/1‑93 (MQ=255)
                                                 gaACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTc                                          <  2:2282484/93‑1 (MQ=255)
                                                   aCCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTcac                                        >  1:3981564/1‑93 (MQ=255)
                                                   aCCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTcac                                        <  1:651932/93‑1 (MQ=255)
                                                    ccAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTcaca                                       >  1:1387272/1‑93 (MQ=255)
                                                       aTCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAAt                                    >  2:2649640/1‑93 (MQ=255)
                                                        tCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAAtt                                   >  2:7136772/1‑93 (MQ=255)
                                                         cGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAAttt                                  >  2:1123888/1‑93 (MQ=255)
                                                           cccATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTAc                                <  1:1546729/93‑1 (MQ=255)
                                                           cccATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTAc                                <  1:5496415/93‑1 (MQ=255)
                                                            ccATGATTTAGGTGAACCATGAGAGGCGGCCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTAc                                <  1:5198781/93‑1 (MQ=255)
                                                            ccATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACt                               <  2:442641/93‑1 (MQ=255)
                                                             cATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTg                              >  1:1773036/1‑93 (MQ=255)
                                                             cATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTg                              >  1:5723150/1‑93 (MQ=255)
                                                              aTGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGa                             >  2:2747792/1‑93 (MQ=255)
                                                              aTGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGa                             <  1:2843350/93‑1 (MQ=255)
                                                              aTGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGa                             <  2:7231847/93‑1 (MQ=255)
                                                                gATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGaaa                           <  2:231848/93‑1 (MQ=255)
                                                                  tttAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATc                         >  1:4049799/1‑93 (MQ=255)
                                                                   ttAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCt                        <  1:1046802/93‑1 (MQ=255)
                                                                   ttAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCt                        <  1:5008306/93‑1 (MQ=255)
                                                                   ttAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCt                        <  2:3740450/93‑1 (MQ=255)
                                                                    tAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCtt                       >  1:3703456/1‑93 (MQ=255)
                                                                     aGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCttt                      <  1:5907480/93‑1 (MQ=255)
                                                                      ggTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTc                     <  2:7178849/93‑1 (MQ=255)
                                                                      ggTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTc                     <  1:4505945/93‑1 (MQ=255)
                                                                       gcgAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCa                    <  1:6200549/91‑1 (MQ=255)
                                                                          aaCCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCagag                 <  2:3284595/93‑1 (MQ=255)
                                                                          aaCCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCagag                 <  2:3997546/93‑1 (MQ=255)
                                                                           aCCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGt                >  2:7059962/1‑93 (MQ=255)
                                                                              aTGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCAt             <  2:6268145/93‑1 (MQ=255)
                                                                               tGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATg            <  2:4567670/93‑1 (MQ=255)
                                                                                  gagGCGG‑TCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGgaa         >  2:483541/1‑93 (MQ=255)
                                                                                  gagGCGG‑CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGgaa         <  1:2797518/93‑1 (MQ=255)
                                                                                    ggCGG‑TCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGgaaga       <  2:3395108/93‑1 (MQ=255)
                                                                                       gg‑TCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATa    >  2:5048741/1‑93 (MQ=255)
                                                                                          tCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATaaa  <  1:4765293/93‑1 (MQ=255)
                                                                                          |                                                                                            
TAACTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAA  >  NC_000913/3899351‑3899532

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GTTTTAACTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAAT  >  NC_000913/3899347‑3899533
                                                                                              |                                                                                              
GTTTTAACTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑C                                                                                                <  SRR4302542.326797/94‑1 (MQ=60)
    TAACTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCC                                                                                            >  SRR4302542.4389060/1‑94 (MQ=60)
     AACTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCC                                                                                           >  SRR4302542.5542184/1‑94 (MQ=60)
     AACTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCC                                                                                           >  SRR4302542.5094105/1‑94 (MQ=60)
      ACTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCA                                                                                          <  SRR4302542.89537/94‑1 (MQ=60)
       CTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAA                                                                                         >  SRR4302542.6896850/1‑94 (MQ=60)
        TGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAAC                                                                                        <  SRR4302542.2701181/94‑1 (MQ=60)
         GCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACC                                                                                       <  SRR4302542.1315324/94‑1 (MQ=60)
          CAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCA                                                                                      >  SRR4302542.2226038/1‑94 (MQ=60)
          CAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCA                                                                                      >  SRR4302542.4683403/1‑94 (MQ=60)
             ATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAA                                                                                   >  SRR4302542.3742214/1‑94 (MQ=60)
              acacACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAAC                                                                                  <  SRR4302542.2612862/90‑1 (MQ=60)
              TCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAAC                                                                                  <  SRR4302542.2717479/94‑1 (MQ=60)
              TCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAAC                                                                                  <  SRR4302542.1892874/94‑1 (MQ=60)
              TCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAAC                                                                                  <  SRR4302542.7454128/94‑1 (MQ=60)
               CAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACG                                                                                 <  SRR4302542.6882033/94‑1 (MQ=60)
                AAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGG                                                                                >  SRR4302542.2074080/1‑94 (MQ=60)
                AAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGG                                                                                <  SRR4302542.2074703/94‑1 (MQ=60)
                 AACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGT                                                                               <  SRR4302542.3205115/94‑1 (MQ=60)
                 AACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGT                                                                               >  SRR4302542.3623030/1‑94 (MQ=60)
                  ACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTA                                                                              >  SRR4302542.5770718/1‑94 (MQ=60)
                   CCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAA                                                                             <  SRR4302542.7110860/94‑1 (MQ=60)
                    CAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAAT                                                                            >  SRR4302542.6713767/1‑94 (MQ=60)
                    CAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAAT                                                                            >  SRR4302542.6753511/1‑94 (MQ=60)
                    CAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAAT                                                                            >  SRR4302542.4738596/1‑94 (MQ=60)
                    CAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAAT                                                                            <  SRR4302542.5318377/94‑1 (MQ=60)
                     AGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATA                                                                           >  SRR4302542.6385182/1‑94 (MQ=60)
                     AGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATA                                                                           <  SRR4302542.652077/94‑1 (MQ=60)
                      GCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAG                                                                          <  SRR4302542.6350616/94‑1 (MQ=60)
                      GCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAG                                                                          <  SRR4302542.3144101/94‑1 (MQ=60)
                       CCGGAGTGTTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGC                                                                         >  SRR4302542.1974908/1‑94 (MQ=60)
                       CCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGC                                                                         <  SRR4302542.5816097/94‑1 (MQ=60)
                       CCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGC                                                                         >  SRR4302542.5558984/1‑94 (MQ=60)
                       CCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGC                                                                         >  SRR4302542.2541485/1‑94 (MQ=60)
                        CGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCC                                                                        <  SRR4302542.3019515/94‑1 (MQ=60)
                        CGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCC                                                                        >  SRR4302542.5033554/1‑94 (MQ=60)
                         GGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCG                                                                       <  SRR4302542.5875767/94‑1 (MQ=60)
                           AGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCG‑TT                                                                    >  SRR4302542.6329635/1‑94 (MQ=60)
                           AGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TT                                                                    <  SRR4302542.7291876/94‑1 (MQ=60)
                            GTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCG‑TTG                                                                   >  SRR4302542.6717846/1‑94 (MQ=60)
                            GTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTG                                                                   <  SRR4302542.674255/94‑1 (MQ=60)
                            GTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTG                                                                   >  SRR4302542.3650290/1‑94 (MQ=60)
                             TATTCGTTACCAAAGCGGCCCAGAGAACCAATCCCCCATGATTTAGGGGAACCATGAGAGGCGG‑CCCCACCACCAGAACGGGAATAGCCGATTG                                                                   >  SRR4302542.3825646/1‑94 (MQ=60)
                              ATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCG‑TTGTA                                                                 >  SRR4302542.3073113/1‑94 (MQ=60)
                              ATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTA                                                                 >  SRR4302542.7343679/1‑94 (MQ=60)
                              ATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTA                                                                 <  SRR4302542.7521598/94‑1 (MQ=60)
                               TTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAA                                                                >  SRR4302542.2980871/1‑94 (MQ=60)
                                TCGTTACCAAAGCGGCCCTGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAAC                                                               <  SRR4302542.4629305/94‑1 (MQ=60)
                                TCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAAC                                                               <  SRR4302542.5693272/94‑1 (MQ=60)
                                TCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAAC                                                               <  SRR4302542.2541208/94‑1 (MQ=60)
                                 CGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACT                                                              >  SRR4302542.708614/1‑94 (MQ=60)
                                 CGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACT                                                              >  SRR4302542.1978049/1‑94 (MQ=60)
                                 CGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACT                                                              <  SRR4302542.1958803/94‑1 (MQ=60)
                                  GTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTA                                                             <  SRR4302542.3186416/94‑1 (MQ=60)
                                   TTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAA                                                            >  SRR4302542.4531408/1‑94 (MQ=60)
                                   TTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAA                                                            >  SRR4302542.3792950/1‑94 (MQ=60)
                                   TTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAA                                                            <  SRR4302542.5944089/94‑1 (MQ=60)
                                    TACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAA                                                           <  SRR4302542.3058320/94‑1 (MQ=60)
                                    TACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAA                                                           <  SRR4302542.6862329/94‑1 (MQ=60)
                                    TACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAA                                                           >  SRR4302542.3039548/1‑94 (MQ=60)
                                     ACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAG                                                          >  SRR4302542.6757207/1‑94 (MQ=60)
                                     ACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAG                                                          >  SRR4302542.5962552/1‑94 (MQ=60)
                                     ACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAG                                                          <  SRR4302542.7507783/94‑1 (MQ=60)
                                      CCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGC                                                         <  SRR4302542.3111202/94‑1 (MQ=60)
                                       CAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCC                                                        <  SRR4302542.3793632/94‑1 (MQ=60)
                                        AAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCA                                                       >  SRR4302542.1735713/1‑94 (MQ=60)
                                         AAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAA                                                      >  SRR4302542.5153728/1‑94 (MQ=60)
                                          AGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAAT                                                     <  SRR4302542.6920756/94‑1 (MQ=60)
                                          AGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAAT                                                     <  SRR4302542.1515508/94‑1 (MQ=60)
                                           GCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATT                                                    <  SRR4302542.3345935/94‑1 (MQ=60)
                                            CGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTT                                                   >  SRR4302542.3794137/1‑94 (MQ=60)
                                             GGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTT                                                   <  SRR4302542.3325945/94‑1 (MQ=60)
                                             GGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTC                                                  <  SRR4302542.1150566/94‑1 (MQ=60)
                                             GGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTC                                                  >  SRR4302542.555063/1‑94 (MQ=60)
                                                CCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCAT                                                >  SRR4302542.2723200/1‑94 (MQ=60)
                                                CCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATC                                               >  SRR4302542.6658055/1‑94 (MQ=60)
                                                CCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATC                                               >  SRR4302542.5831757/1‑94 (MQ=60)
                                                CCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATC                                               >  SRR4302542.1364081/1‑94 (MQ=60)
                                                CCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATC                                               <  SRR4302542.6367890/94‑1 (MQ=60)
                                                 CAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCT                                              <  SRR4302542.6139016/94‑1 (MQ=60)
                                                 CAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCT                                              <  SRR4302542.2062233/94‑1 (MQ=60)
                                                 CAGAGAACCAATCCCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGAAATAGCCG‑TTGTAACTAAAGCCAATTTCATCT                                              >  SRR4302542.4085704/1‑94 (MQ=60)
                                                  AGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTT                                             >  SRR4302542.5604100/1‑94 (MQ=60)
                                                   GAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTT                                            <  SRR4302542.7508668/94‑1 (MQ=60)
                                                   GAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTT                                            <  SRR4302542.1001440/94‑1 (MQ=60)
                                                   GAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTT                                            >  SRR4302542.6874131/1‑94 (MQ=60)
                                                    AGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTC                                           >  SRR4302542.6373135/1‑94 (MQ=60)
                                                    AGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTC                                           <  SRR4302542.2994058/94‑1 (MQ=60)
                                                      AACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCAC                                         >  SRR4302542.2832755/1‑94 (MQ=60)
                                                      AACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCAC                                         >  SRR4302542.4020836/1‑94 (MQ=60)
                                                      AACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCAC                                         >  SRR4302542.2016216/1‑94 (MQ=60)
                                                      AACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCAC                                         >  SRR4302542.7229890/1‑94 (MQ=60)
                                                       ACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACA                                        <  SRR4302542.657528/94‑1 (MQ=60)
                                                       ACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACA                                        >  SRR4302542.1399257/1‑94 (MQ=60)
                                                        CCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAA                                       <  SRR4302542.2788038/94‑1 (MQ=60)
                                                          AATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAAT                                     >  SRR4302542.4625320/1‑94 (MQ=60)
                                                          AATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAAT                                     <  SRR4302542.9821/94‑1 (MQ=60)
                                                          AATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGAAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAAT                                     >  SRR4302542.1520324/1‑94 (MQ=60)
                                                           ATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATT                                    <  SRR4302542.2881911/94‑1 (MQ=60)
                                                           ATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATT                                    <  SRR4302542.5406404/94‑1 (MQ=60)
                                                           ATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATT                                    <  SRR4302542.5205696/94‑1 (MQ=60)
                                                            TCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTT                                   <  SRR4302542.43389/94‑1 (MQ=60)
                                                            TCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTT                                   <  SRR4302542.4949891/94‑1 (MQ=60)
                                                             CGCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTA                                  <  SRR4302542.3501762/94‑1 (MQ=60)
                                                              GCCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTAC                                 <  SRR4302542.7317284/94‑1 (MQ=60)
                                                               CCCATGATTTAGGTGAACCATGAGAGGCGG‑GCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACT                                <  SRR4302542.2067217/94‑1 (MQ=60)
                                                               CCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACT                                <  SRR4302542.2882210/94‑1 (MQ=60)
                                                               CCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACT                                <  SRR4302542.5144651/94‑1 (MQ=60)
                                                               CCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACT                                <  SRR4302542.5549803/94‑1 (MQ=60)
                                                               CCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACT                                >  SRR4302542.281588/1‑94 (MQ=60)
                                                               CCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACT                                <  SRR4302542.6242185/94‑1 (MQ=60)
                                                               CCCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACT                                <  SRR4302542.1560079/94‑1 (MQ=60)
                                                                CCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACT                                <  SRR4302542.5249299/94‑1 (MQ=60)
                                                                CCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATATCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTG                               >  SRR4302542.7444936/1‑94 (MQ=60)
                                                                CCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTG                               >  SRR4302542.4205955/1‑94 (MQ=60)
                                                                CCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTG                               >  SRR4302542.1788408/1‑94 (MQ=60)
                                                                CCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTG                               >  SRR4302542.5778699/1‑94 (MQ=60)
                                                                CCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTG                               >  SRR4302542.1349185/1‑94 (MQ=60)
                                                                CCATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTG                               >  SRR4302542.1135252/1‑94 (MQ=60)
                                                                 CATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGA                              >  SRR4302542.4024663/1‑94 (MQ=60)
                                                                 CATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGA                              >  SRR4302542.7311425/1‑94 (MQ=60)
                                                                 CATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGA                              <  SRR4302542.2860831/94‑1 (MQ=60)
                                                                  ATGATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAA                             <  SRR4302542.2870671/94‑1 (MQ=60)
                                                                    GATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAAT                           <  SRR4302542.11046/94‑1 (MQ=60)
                                                                     ATTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATC                          >  SRR4302542.4089746/1‑94 (MQ=60)
                                                                      TTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCT                         <  SRR4302542.1195535/94‑1 (MQ=60)
                                                                      TTTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCT                         >  SRR4302542.3635720/1‑94 (MQ=60)
                                                                       TTAGGTGAACCATGAGAGGCGGCCCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCT                         <  SRR4302542.2198142/94‑1 (MQ=60)
                                                                       TTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTT                        >  SRR4302542.2590535/1‑94 (MQ=60)
                                                                       TTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTT                        <  SRR4302542.1055784/94‑1 (MQ=60)
                                                                       TTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTT                        <  SRR4302542.5056950/94‑1 (MQ=60)
                                                                       TTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTT                        >  SRR4302542.3740105/1‑94 (MQ=60)
                                                                       TTAGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTT                        >  SRR4302542.1616556/1‑94 (MQ=60)
                                                                         AGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTC                      <  SRR4302542.3379884/94‑1 (MQ=60)
                                                                         AGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTC                      <  SRR4302542.5964727/94‑1 (MQ=60)
                                                                         AGGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTC                      <  SRR4302542.6324196/94‑1 (MQ=60)
                                                                          GGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCA                     <  SRR4302542.5155925/94‑1 (MQ=60)
                                                                          GGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCA                     >  SRR4302542.1244686/1‑94 (MQ=60)
                                                                          GGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCA                     <  SRR4302542.6459686/94‑1 (MQ=60)
                                                                          GGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCA                     <  SRR4302542.4550113/94‑1 (MQ=60)
                                                                          GGTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCA                     <  SRR4302542.1593620/94‑1 (MQ=60)
                                                                           GTGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAG                    <  SRR4302542.4397181/94‑1 (MQ=60)
                                                                           GCGAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAG                    <  SRR4302542.6261189/94‑1 (MQ=60)
                                                                             GAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAG                  <  SRR4302542.2872592/94‑1 (MQ=60)
                                                                             GAACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAG                  <  SRR4302542.7268731/94‑1 (MQ=60)
                                                                              AACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGT                 <  SRR4302542.7355036/94‑1 (MQ=60)
                                                                               ACCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTC                >  SRR4302542.3217019/1‑94 (MQ=60)
                                                                                CCATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCA               >  SRR4302542.305274/1‑94 (MQ=60)
                                                                                  ATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATG             >  SRR4302542.4756553/1‑94 (MQ=60)
                                                                                  ATGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATG             <  SRR4302542.4743138/94‑1 (MQ=60)
                                                                                   TGAGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGG            <  SRR4302542.5900703/94‑1 (MQ=60)
                                                                                     AGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAA          <  SRR4302542.2410736/94‑1 (MQ=60)
                                                                                     AGAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAA          <  SRR4302542.715280/94‑1 (MQ=60)
                                                                                      GAGGCGG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAG         <  SRR4302542.2824434/94‑1 (MQ=60)
                                                                                          CGG‑CCCCCCAACCAGAACGATAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATA     <  SRR4302542.3941456/94‑1 (MQ=60)
                                                                                           GG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAA    <  SRR4302542.5760844/94‑1 (MQ=60)
                                                                                           GG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAA    >  SRR4302542.3597626/1‑94 (MQ=60)
                                                                                           GG‑CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAA    >  SRR4302542.5418303/1‑94 (MQ=60)
                                                                                              TCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAAT  <  SRR4302542.4811745/94‑1 (MQ=60)
                                                                                              CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAAT  >  SRR4302542.2604982/1‑94 (MQ=60)
                                                                                              CCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAACAAAT  >  SRR4302542.4608387/1‑94 (MQ=60)
                                                                                              |                                                                                              
GTTTTAACTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGG‑TCCCCCAACCAGAACGGTAATAGCCG‑TTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAAT  >  NC_000913/3899347‑3899533

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑