Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,917,345 |
A→G |
C47C (TGT→TGC) |
atpA ← |
membrane‑bound ATP synthase, F1 sector, alpha‑subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,917,345 | 0 | A | G | 84.7%
| 716.9
/ 119.7
| 308 | C47C (TGT→TGC) | atpA | membrane‑bound ATP synthase, F1 sector, alpha‑subunit |
| Reads supporting (aligned to +/- strand): ref base A (25/22); new base G (119/141); total (144/164) |
| Fisher's exact test for biased strand distribution p-value = 4.27e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.42e-01 |
Only 100 of 314 total aligned reads displayed.
GACCCATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAACTGAG > NC_000913/3917254‑3917436
|
aCCCATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCtgcatgca < 1:3415827/93‑1 (MQ=255)
cccATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCaa < 2:3129779/93‑1 (MQ=255)
cccATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCaa > 2:6904230/1‑93 (MQ=255)
cccATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCaa < 1:3629437/93‑1 (MQ=255)
ccATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAAt < 2:1995681/93‑1 (MQ=255)
cATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATc < 1:7071704/93‑1 (MQ=255)
cATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATc < 2:6746804/93‑1 (MQ=255)
cATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATc < 2:6164868/93‑1 (MQ=255)
tAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCgg < 2:2603948/93‑1 (MQ=255)
aacaacCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGc < 1:3181924/93‑1 (MQ=255)
caacCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCa < 2:1385351/93‑1 (MQ=255)
caacCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCa > 1:5065034/1‑93 (MQ=255)
caacCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCa > 1:4841866/1‑93 (MQ=255)
caacCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCa < 2:4365833/93‑1 (MQ=255)
ccGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGc < 2:7515866/93‑1 (MQ=255)
gCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCg > 2:5359618/1‑93 (MQ=255)
cACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGt > 1:1577592/1‑93 (MQ=255)
cACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGt < 2:3314008/93‑1 (MQ=255)
ccTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGa < 2:4009937/93‑1 (MQ=255)
cTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGaa < 1:3115808/93‑1 (MQ=255)
cTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGaa > 1:836258/1‑93 (MQ=255)
cTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGaa < 1:7200891/93‑1 (MQ=255)
tACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAAt < 1:5754855/93‑1 (MQ=255)
aCAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATg < 1:1812329/93‑1 (MQ=255)
cAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGc < 2:1516479/93‑1 (MQ=255)
agagTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCg < 2:3925513/93‑1 (MQ=255)
gagTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCgg < 1:3233796/93‑1 (MQ=255)
agTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCTTGCATACAATCGGCCAGGCCGTGAATGCGGa > 1:6944192/1‑93 (MQ=255)
agTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGa > 2:7342308/1‑93 (MQ=255)
cgcTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAaca < 1:1287809/93‑1 (MQ=255)
cgcTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCCGCATGCAATCGGCCAGGCCGTGAATGCGGATAaca < 2:4525124/93‑1 (MQ=255)
gcTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAacac < 1:2158979/93‑1 (MQ=255)
gcTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAacac > 1:5351062/1‑93 (MQ=255)
gcTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAacac < 1:5426385/93‑1 (MQ=255)
cTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACAcc < 1:3811080/93‑1 (MQ=255)
tCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCg > 1:2042451/1‑93 (MQ=255)
cGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGt < 1:2918095/93‑1 (MQ=255)
gAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTc < 1:102270/93‑1 (MQ=255)
aGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCa > 1:529613/1‑93 (MQ=255)
ggTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCAc > 1:4449158/1‑93 (MQ=255)
ggTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCAc < 1:6898668/93‑1 (MQ=255)
gTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACt < 2:2708191/93‑1 (MQ=255)
gTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACt < 1:1208425/93‑1 (MQ=255)
ttCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACtt > 1:6602599/1‑93 (MQ=255)
ttCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACtt > 2:2569860/1‑93 (MQ=255)
tCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTa < 1:6313604/93‑1 (MQ=255)
tCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTa > 2:7302280/1‑93 (MQ=255)
tCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTa > 2:7106813/1‑93 (MQ=255)
gTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAg > 1:6416518/1‑93 (MQ=255)
gTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAg < 2:1207359/93‑1 (MQ=255)
cGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGaaa < 2:3218023/93‑1 (MQ=255)
cGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGaaa < 2:3442358/93‑1 (MQ=255)
gATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAAc > 2:5284598/1‑93 (MQ=255)
aTAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACa < 1:2794198/93‑1 (MQ=255)
aGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAAt < 2:2861714/93‑1 (MQ=255)
aGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAAt < 2:483270/93‑1 (MQ=255)
gCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATa < 2:4182095/93‑1 (MQ=255)
gCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATa > 2:5946671/1‑93 (MQ=255)
cGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAg < 2:348347/93‑1 (MQ=255)
gTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGt < 1:4140190/93‑1 (MQ=255)
tAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTa > 2:1697522/1‑93 (MQ=255)
tAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTa > 2:5054235/1‑93 (MQ=255)
tAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTa > 1:3519153/1‑93 (MQ=255)
aaCGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTAc < 2:6480614/93‑1 (MQ=255)
aCGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTAcc < 2:5177048/93‑1 (MQ=255)
aCGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTAcc < 1:6497962/93‑1 (MQ=255)
aCGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTAcc < 1:625174/93‑1 (MQ=255)
aCGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTAcc > 2:6523789/1‑93 (MQ=255)
cGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCt < 1:1642075/93‑1 (MQ=255)
gTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTc < 1:2579464/93‑1 (MQ=255)
gTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTc < 1:1904118/93‑1 (MQ=255)
gTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTc > 2:2483623/1‑93 (MQ=255)
gTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTc < 1:5538620/93‑1 (MQ=255)
tACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGt > 1:2739805/1‑93 (MQ=255)
cccGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTtg < 1:6688160/93‑1 (MQ=255)
cccGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTtg < 1:6071576/93‑1 (MQ=255)
ccGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTtgt > 2:492646/1‑93 (MQ=255)
ccGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTtgt < 2:5869001/93‑1 (MQ=255)
cGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTtgtg > 2:4746713/1‑93 (MQ=255)
ggCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGCGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGa < 1:7373771/93‑1 (MQ=255)
gCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAg < 2:4090844/93‑1 (MQ=255)
aGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCt < 1:3965538/93‑1 (MQ=255)
aGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCt > 1:4243014/1‑93 (MQ=255)
ggAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTtc > 1:4578183/1‑93 (MQ=255)
ggAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTtc < 1:5606981/93‑1 (MQ=255)
gagaTCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTtca < 2:5655288/93‑1 (MQ=255)
gagaTCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTtca > 2:6994916/1‑93 (MQ=255)
aTCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTtcactc < 2:5081703/93‑1 (MQ=255)
aTCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTtcactc > 2:1089041/1‑93 (MQ=255)
aTCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTtcactc > 2:2204251/1‑93 (MQ=255)
aTTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTcaca < 2:1783769/93‑1 (MQ=255)
aCCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACAtt > 1:946578/1‑93 (MQ=255)
cccTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTg > 1:142607/1‑93 (MQ=255)
cccTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTg > 1:2344914/1‑93 (MQ=255)
tgcatgcaATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAAc < 2:2662527/93‑1 (MQ=255)
tgcatgcaATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAAc > 2:5485840/1‑93 (MQ=255)
tgcatgcaATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAAc > 2:5009771/1‑93 (MQ=255)
gCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAACt < 1:7497985/93‑1 (MQ=255)
aaaCAATCGGCCAGGCCGTGAATGGGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAACTGa < 1:4703794/91‑1 (MQ=255)
tACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAACTGAg > 2:6638457/1‑93 (MQ=255)
|
GACCCATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAACTGAG > NC_000913/3917254‑3917436
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGGACCCATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAACTGAG > NC_000913/3917252‑3917436
|
CGGACCCATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATG < SRR4302542.6864011/94‑1 (MQ=60)
GGACCCATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGC > SRR4302542.330776/1‑94 (MQ=60)
GGACCCATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGC > SRR4302542.6254429/1‑94 (MQ=60)
GGACCCATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGC < SRR4302542.4086907/94‑1 (MQ=60)
GGACCCATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGC < SRR4302542.1858795/94‑1 (MQ=60)
ACCCATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAA < SRR4302542.3447833/94‑1 (MQ=60)
ACCCATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAA < SRR4302542.2834389/94‑1 (MQ=60)
CCCATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAAT < SRR4302542.3663251/94‑1 (MQ=60)
CCATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATC < SRR4302542.3262821/94‑1 (MQ=60)
CCATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATC > SRR4302542.3647928/1‑94 (MQ=60)
CCATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATC > SRR4302542.737992/1‑94 (MQ=60)
CATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCG < SRR4302542.7141107/94‑1 (MQ=60)
CATAACAACCGCACCTACAGAGTCGCACTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCG > SRR4302542.3398948/1‑94 (MQ=60)
ATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGG > SRR4302542.42262/1‑94 (MQ=60)
ATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGG < SRR4302542.6359783/94‑1 (MQ=60)
TAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGC < SRR4302542.1786969/94‑1 (MQ=60)
AACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCC < SRR4302542.3029136/94‑1 (MQ=60)
AACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCC < SRR4302542.3212075/94‑1 (MQ=60)
ACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCA < SRR4302542.1603798/94‑1 (MQ=60)
ACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCA > SRR4302542.4889024/1‑94 (MQ=60)
ACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCA > SRR4302542.5114259/1‑94 (MQ=60)
CAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAG < SRR4302542.5442842/94‑1 (MQ=60)
CAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAG < SRR4302542.856667/94‑1 (MQ=60)
ACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGC < SRR4302542.1552261/94‑1 (MQ=60)
ACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGC > SRR4302542.1328700/1‑94 (MQ=60)
ACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGC > SRR4302542.2020307/1‑94 (MQ=60)
GCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGT > SRR4302542.1591216/1‑94 (MQ=60)
ACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGA > SRR4302542.4550606/1‑94 (MQ=60)
ACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGA > SRR4302542.2158769/1‑94 (MQ=60)
ACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGA > SRR4302542.5592572/1‑94 (MQ=60)
CCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAA > SRR4302542.6466630/1‑94 (MQ=60)
CCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAA < SRR4302542.2956408/94‑1 (MQ=60)
CCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAA > SRR4302542.843484/1‑94 (MQ=60)
CTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAAT < SRR4302542.7271557/94‑1 (MQ=60)
CTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAAT < SRR4302542.5723299/94‑1 (MQ=60)
CTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAAT < SRR4302542.3145417/94‑1 (MQ=60)
CTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAAT > SRR4302542.5359308/1‑94 (MQ=60)
TACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATG < SRR4302542.5810718/94‑1 (MQ=60)
TACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATG < SRR4302542.6907197/94‑1 (MQ=60)
ACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGC < SRR4302542.1071376/94‑1 (MQ=60)
ACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGC < SRR4302542.3977822/94‑1 (MQ=60)
ACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGC < SRR4302542.1828030/94‑1 (MQ=60)
CAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCG < SRR4302542.5865744/94‑1 (MQ=60)
AGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGG > SRR4302542.2811632/1‑94 (MQ=60)
AGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGG > SRR4302542.4989859/1‑94 (MQ=60)
AGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGG > SRR4302542.6504748/1‑94 (MQ=60)
GAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCTTGCATACAATCGGCCAGGCCGTGAATGCGGA > SRR4302542.7012424/1‑94 (MQ=60)
GAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGA < SRR4302542.3264374/94‑1 (MQ=60)
AGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGAT > SRR4302542.6327554/1‑94 (MQ=60)
AGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGAT > SRR4302542.7014796/1‑94 (MQ=60)
GCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACA < SRR4302542.5788980/94‑1 (MQ=60)
GCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACA > SRR4302542.1641113/1‑94 (MQ=60)
CGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACAC > SRR4302542.3454013/1‑94 (MQ=60)
CGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACAC < SRR4302542.1298898/94‑1 (MQ=60)
CGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACAC > SRR4302542.894000/1‑94 (MQ=60)
CGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACAC > SRR4302542.5403039/1‑94 (MQ=60)
GCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACC > SRR4302542.3620372/1‑94 (MQ=60)
GCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACC < SRR4302542.5479114/94‑1 (MQ=60)
GCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACC > SRR4302542.5255907/1‑94 (MQ=60)
GCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACC < SRR4302542.2177571/94‑1 (MQ=60)
GCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACC > SRR4302542.2620874/1‑94 (MQ=60)
GCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACC > SRR4302542.1235617/1‑94 (MQ=60)
CTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCG > SRR4302542.3246650/1‑94 (MQ=60)
CTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCG > SRR4302542.4182761/1‑94 (MQ=60)
CTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCG > SRR4302542.2060110/1‑94 (MQ=60)
CTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCG < SRR4302542.3848787/94‑1 (MQ=60)
CTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCG > SRR4302542.3875379/1‑94 (MQ=60)
TCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGT > SRR4302542.3406629/1‑94 (MQ=60)
CGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTC < SRR4302542.2946071/94‑1 (MQ=60)
GAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCA < SRR4302542.103123/94‑1 (MQ=60)
GAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCA > SRR4302542.4874615/1‑94 (MQ=60)
GAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCA > SRR4302542.534190/1‑94 (MQ=60)
AGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCAC > SRR4302542.4492799/1‑94 (MQ=60)
GGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACT < SRR4302542.819743/94‑1 (MQ=60)
GGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACT < SRR4302542.6966411/94‑1 (MQ=60)
GGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACT < SRR4302542.4584916/94‑1 (MQ=60)
GTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTT > SRR4302542.2477960/1‑94 (MQ=60)
GTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTT > SRR4302542.6667653/1‑94 (MQ=60)
GTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTT < SRR4302542.1218810/94‑1 (MQ=60)
TTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTA < SRR4302542.1143863/94‑1 (MQ=60)
TCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTAC < SRR4302542.2299101/94‑1 (MQ=60)
TCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTAC < SRR4302542.6375844/94‑1 (MQ=60)
TCAGTGCAATAGCGTAACGGTTACCCGGCAGGGAAATCATTTCCCCCTGCATCCAATCGGCAAGGCCGTGAATCCGGATAACCCCGTCCCTTAC < SRR4302542.3698782/94‑1 (MQ=60)
CAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACA > SRR4302542.2539104/1‑94 (MQ=60)
AGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAG > SRR4302542.6479754/1‑94 (MQ=60)
AGTGCGATAGCGTAACGGTTACCCGGCAGGAAGATCATTTCACCCTGCATGCAAACGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAG < SRR4302542.5619743/94‑1 (MQ=60)
CGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAAC < SRR4302542.7502947/94‑1 (MQ=60)
GATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACA > SRR4302542.2320255/1‑94 (MQ=60)
ATAGCGTAACGGTTACCCGGCGGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAA > SRR4302542.1971769/1‑94 (MQ=60)
ATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAA < SRR4302542.6205261/94‑1 (MQ=60)
ATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAA < SRR4302542.2821085/94‑1 (MQ=60)
TAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAAT < SRR4302542.1899267/94‑1 (MQ=60)
AGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATA > SRR4302542.5541618/1‑94 (MQ=60)
AGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATA < SRR4302542.3150870/94‑1 (MQ=60)
AGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATA < SRR4302542.3165525/94‑1 (MQ=60)
GCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACCCCGTCACTTACAGAAACAATAG < SRR4302542.123394/94‑1 (MQ=60)
GCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAG < SRR4302542.673911/94‑1 (MQ=60)
CGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGT > SRR4302542.5113774/1‑94 (MQ=60)
CGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGT > SRR4302542.2831979/1‑94 (MQ=60)
CGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGT < SRR4302542.7240734/94‑1 (MQ=60)
CGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGT < SRR4302542.266562/94‑1 (MQ=60)
GTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTA > SRR4302542.4355171/1‑94 (MQ=60)
GTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTA < SRR4302542.4180982/94‑1 (MQ=60)
GTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTA > SRR4302542.3552048/1‑94 (MQ=60)
TAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTAC < SRR4302542.5575422/94‑1 (MQ=60)
TAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTAC < SRR4302542.618333/94‑1 (MQ=60)
TAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTAC < SRR4302542.6973286/94‑1 (MQ=60)
ACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCT < SRR4302542.6562003/94‑1 (MQ=60)
ACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCT < SRR4302542.630556/94‑1 (MQ=60)
CGGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTT < SRR4302542.1656266/94‑1 (MQ=60)
GGTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTC > SRR4302542.1716198/1‑94 (MQ=60)
GGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTC < SRR4302542.4163804/94‑1 (MQ=60)
GTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCG < SRR4302542.1920575/94‑1 (MQ=60)
GTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCG < SRR4302542.2604469/94‑1 (MQ=60)
GTTACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCG < SRR4302542.5592460/94‑1 (MQ=60)
TTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGT > SRR4302542.2766223/1‑94 (MQ=60)
ACCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTG < SRR4302542.5935412/94‑1 (MQ=60)
CCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGT < SRR4302542.6130380/94‑1 (MQ=60)
CCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGT < SRR4302542.4701141/94‑1 (MQ=60)
CCCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGT < SRR4302542.6754042/94‑1 (MQ=60)
CCGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTG < SRR4302542.874954/94‑1 (MQ=60)
CGGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGA > SRR4302542.39067/1‑94 (MQ=60)
GGCAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGCGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAG < SRR4302542.7445979/94‑1 (MQ=60)
GGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAG > SRR4302542.2783226/1‑94 (MQ=60)
GCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGC < SRR4302542.7604895/94‑1 (MQ=60)
CAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCT > SRR4302542.7451993/1‑94 (MQ=60)
CAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCT > SRR4302542.149911/1‑94 (MQ=60)
CAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCT > SRR4302542.3523166/1‑94 (MQ=60)
CAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCT > SRR4302542.4284830/1‑94 (MQ=60)
CAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCT < SRR4302542.1843262/94‑1 (MQ=60)
CAGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCT > SRR4302542.4711331/1‑94 (MQ=60)
AGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTT < SRR4302542.4004691/94‑1 (MQ=60)
AGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTT > SRR4302542.4839731/1‑94 (MQ=60)
AGGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTT > SRR4302542.6945450/1‑94 (MQ=60)
AGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTT > SRR4302542.3065517/1‑94 (MQ=60)
GGGAGATCATTTTTCCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTC > SRR4302542.645943/1‑94 (MQ=60)
GGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTC > SRR4302542.4622972/1‑94 (MQ=60)
GGGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTC < SRR4302542.5437560/94‑1 (MQ=60)
GGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCA > SRR4302542.5304993/1‑94 (MQ=60)
GGAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCA < SRR4302542.5661456/94‑1 (MQ=60)
GAGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCAC > SRR4302542.6665832/1‑94 (MQ=60)
AGATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACT > SRR4302542.3709019/1‑94 (MQ=60)
ATCATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCA < SRR4302542.405808/94‑1 (MQ=60)
ATTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAA > SRR4302542.6922996/1‑94 (MQ=60)
TTTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAAC > SRR4302542.6985298/1‑94 (MQ=60)
TTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACA > SRR4302542.4401949/1‑94 (MQ=60)
TTCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACA > SRR4302542.723641/1‑94 (MQ=60)
TCACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACAT > SRR4302542.7399797/1‑94 (MQ=60)
CACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATT > SRR4302542.954717/1‑94 (MQ=60)
CACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATT < SRR4302542.2050036/94‑1 (MQ=60)
ACCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTG < SRR4302542.6651441/94‑1 (MQ=60)
ACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTG > SRR4302542.2364999/1‑94 (MQ=60)
ACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTG > SRR4302542.143798/1‑94 (MQ=60)
CCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGA < SRR4302542.5383043/94‑1 (MQ=60)
CCCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGA < SRR4302542.1332244/94‑1 (MQ=60)
CCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGA < SRR4302542.6688737/94‑1 (MQ=60)
CCTGCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAA > SRR4302542.5994864/1‑94 (MQ=60)
CTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAAC > SRR4302542.6542062/1‑94 (MQ=60)
GCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAACTG > SRR4302542.7020748/1‑94 (MQ=60)
GCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAACTG < SRR4302542.497170/94‑1 (MQ=60)
GCATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAACTG < SRR4302542.2109739/94‑1 (MQ=60)
GCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAACTG < SRR4302542.7571683/94‑1 (MQ=60)
CATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAACTGA > SRR4302542.5301335/1‑94 (MQ=60)
ATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAACTGAG < SRR4302542.5667843/94‑1 (MQ=60)
ATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAACTGAG > SRR4302542.2425608/1‑94 (MQ=60)
ATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAACTGAG > SRR4302542.5547239/1‑94 (MQ=60)
ATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAACTGAG < SRR4302542.2979693/94‑1 (MQ=60)
ATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAACTGAG < SRR4302542.3286328/94‑1 (MQ=60)
ATGCAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAACTGAG < SRR4302542.2374414/94‑1 (MQ=60)
AAACAATCGGCCAGGCCGTGAATGGGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAACTGAG < SRR4302542.4749689/94‑1 (MQ=60)
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CGGACCCATAACAACCGCACCTACAGAGTCGCGCTCGAGGTTCAGTGCGATAGCGTAACGGTTACCCGGCAGGGAGATCATTTCACCCTGCATACAATCGGCCAGGCCGTGAATGCGGATAACACCGTCACTTACAGAAACAATAGTACCTTCGTTGTGAGCTTCACTCACAACATTGAACTGAG > NC_000913/3917252‑3917436
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
