Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,058,326 |
A→G |
T101A (ACC→GCC) |
yihL → |
putative transcriptional regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,058,326 | 0 | A | G | 82.6%
| 527.2
/ 107.6
| 247 | T101A (ACC→GCC) | yihL | putative transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (15/28); new base G (95/109); total (110/137) |
| Fisher's exact test for biased strand distribution p-value = 1.80e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 |
Only 100 of 247 total aligned reads displayed.
ACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGCT > NC_000913/4058236‑4058416
|
aCCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGcc > 2:2585875/1‑93 (MQ=255)
aCCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTAcc < 1:2193841/93‑1 (MQ=255)
cccAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCg > 1:4595541/1‑93 (MQ=255)
cccAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCg < 2:5086848/93‑1 (MQ=255)
ccAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCga < 1:1809940/93‑1 (MQ=255)
ccAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCga > 1:6860200/1‑93 (MQ=255)
ccAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCga < 1:2593307/93‑1 (MQ=255)
ccAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCga < 1:6470312/93‑1 (MQ=255)
aGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCgaga < 1:4682777/93‑1 (MQ=255)
gCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGaa > 1:1626258/1‑93 (MQ=255)
gCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGaa > 2:1520692/1‑93 (MQ=255)
ccGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGaaa > 2:4339405/1‑93 (MQ=255)
cgcgATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGaaaa < 1:1894136/93‑1 (MQ=255)
gcgATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGaaaaa < 2:2922240/93‑1 (MQ=255)
gcgATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGaaaaa > 1:655406/1‑93 (MQ=255)
gcgATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGaaaaa > 1:6239748/1‑93 (MQ=255)
cgATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAAc < 2:3123742/93‑1 (MQ=255)
gATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAAcc > 1:521965/1‑93 (MQ=255)
attttAATTCCAGCCGGGAGCTGCCGGCGAG‑TTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCg < 2:5573020/91‑1 (MQ=255)
aTTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCg > 1:4355516/1‑93 (MQ=255)
aTTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCg > 1:6063791/1‑93 (MQ=255)
aTTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCg > 1:7379966/1‑93 (MQ=255)
tttAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGt < 2:3472206/93‑1 (MQ=255)
tttAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGt < 2:5163548/93‑1 (MQ=255)
tAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTAc > 2:1810609/1‑93 (MQ=255)
aaTTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTAcc > 1:5888571/1‑93 (MQ=255)
aaTTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTAcc < 1:1259948/93‑1 (MQ=255)
aTTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCa > 1:4059867/1‑93 (MQ=255)
aTTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCa > 2:6344972/1‑93 (MQ=255)
ttACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAg < 2:6511843/93‑1 (MQ=255)
gtACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAg > 2:7321737/2‑93 (MQ=255)
cAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGa > 2:3921890/1‑93 (MQ=255)
aGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGat < 2:5064539/93‑1 (MQ=255)
aGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGat < 2:4596110/93‑1 (MQ=255)
gTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGata < 1:5745905/93‑1 (MQ=255)
tCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGatat < 2:4500398/93‑1 (MQ=255)
ccGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGTGGTTTGCCGAGAAAAACCGTACCAGCGATAtt < 2:5523383/93‑1 (MQ=255)
ccGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATAtt < 1:7228472/93‑1 (MQ=255)
cGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTc < 2:123062/93‑1 (MQ=255)
ggAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTcc < 2:4107689/93‑1 (MQ=255)
ggAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTcc < 1:5169796/93‑1 (MQ=255)
ggAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTcc < 1:7327151/93‑1 (MQ=255)
gAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTccc > 2:3086023/1‑93 (MQ=255)
gAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTccc > 1:3269397/1‑93 (MQ=255)
gAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTccc < 1:4365105/93‑1 (MQ=255)
gCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCga < 2:7043384/93‑1 (MQ=255)
gCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCga < 1:3367969/93‑1 (MQ=255)
tGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCgaga < 2:1057429/93‑1 (MQ=255)
tGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCgaga < 2:5378842/93‑1 (MQ=255)
tGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCgaga > 2:27433/1‑93 (MQ=255)
tGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCgaga < 2:1038555/93‑1 (MQ=255)
gAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTcgc > 2:2505498/1‑93 (MQ=255)
aGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTcgcg > 2:5198981/1‑93 (MQ=255)
aGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTcgcg > 1:2259735/1‑93 (MQ=255)
cTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGcc < 2:4305754/93‑1 (MQ=255)
cTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGcc < 2:552647/93‑1 (MQ=255)
tttCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACTGTACCAGCGATATTCCCGAGACGCTCGCGCCa > 1:5578587/1‑93 (MQ=255)
tCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACt > 2:2256114/1‑93 (MQ=255)
tCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACt < 1:6644053/93‑1 (MQ=255)
aGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGa < 1:3606668/93‑1 (MQ=255)
ggCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGc < 2:3511867/93‑1 (MQ=255)
gCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCa < 2:882128/93‑1 (MQ=255)
gCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCa < 2:903596/93‑1 (MQ=255)
ccGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAg < 2:475812/93‑1 (MQ=255)
cGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGt > 1:4792977/1‑93 (MQ=255)
gCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTg > 2:6682931/1‑93 (MQ=255)
cAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGa < 2:5742490/93‑1 (MQ=255)
aaTTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGAc > 1:3075219/1‑93 (MQ=255)
aaTTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGAc > 2:2276087/1‑93 (MQ=255)
aTTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACg > 2:1460849/1‑93 (MQ=255)
ttGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGc < 1:5817728/93‑1 (MQ=255)
gCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATc < 2:3707072/93‑1 (MQ=255)
gCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATc > 2:4159632/1‑93 (MQ=255)
cAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCa < 1:7427269/93‑1 (MQ=255)
aGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAAc < 1:3044481/93‑1 (MQ=255)
aGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAAc > 1:2159663/1‑93 (MQ=255)
gCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGa < 1:954260/93‑1 (MQ=255)
gagaGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAAc < 1:5575993/93‑1 (MQ=255)
gagaGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAAc < 2:5669627/93‑1 (MQ=255)
agagCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAAct < 1:7164519/93‑1 (MQ=255)
agagCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAAct > 2:1749708/1‑93 (MQ=255)
gagCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAActc < 2:6479186/93‑1 (MQ=255)
agCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAActct > 2:5944993/1‑93 (MQ=255)
gCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTa > 1:7363448/1‑93 (MQ=255)
gCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTa < 2:4380420/93‑1 (MQ=255)
ccTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTAt < 2:5313168/93‑1 (MQ=255)
cTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATc > 1:5954030/1‑93 (MQ=255)
cTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATc < 1:4945133/93‑1 (MQ=255)
ttCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCg > 2:6206600/1‑93 (MQ=255)
ttCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCg > 2:2894773/1‑93 (MQ=255)
cTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCAt > 1:6744318/1‑93 (MQ=255)
cTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCAt < 2:5501108/93‑1 (MQ=255)
cTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACACTCGCGCCGCTGATTGCAGTGACGCCATCAACTGAACTCTATCGCAt > 2:1965883/1‑93 (MQ=255)
tcggggTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATc < 1:1005656/91‑1 (MQ=255)
ggggTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCAc < 2:2970353/93‑1 (MQ=255)
gggTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCAcc < 2:3663434/93‑1 (MQ=255)
gggTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCAcc < 2:2455850/93‑1 (MQ=255)
ggTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCg < 2:7232146/93‑1 (MQ=255)
gTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCgg > 2:3316462/1‑93 (MQ=255)
tttGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGc > 1:3949798/1‑93 (MQ=255)
|
ACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGCT > NC_000913/4058236‑4058416
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGCTGG > NC_000913/4058234‑4058418
|
TGACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGC < SRR4302542.1650582/94‑1 (MQ=60)
GACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCC < SRR4302542.875305/94‑1 (MQ=60)
GACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCC < SRR4302542.4604505/94‑1 (MQ=60)
ACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCG > SRR4302542.4640477/1‑94 (MQ=60)
ACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCG < SRR4302542.2212739/94‑1 (MQ=60)
CCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGA > SRR4302542.6927609/1‑94 (MQ=60)
CCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGA > SRR4302542.480758/1‑94 (MQ=60)
CCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGA > SRR4302542.3397321/1‑94 (MQ=60)
CCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAG < SRR4302542.1825623/94‑1 (MQ=60)
CCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAG < SRR4302542.2618419/94‑1 (MQ=60)
CCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAG > SRR4302542.5978923/1‑94 (MQ=60)
CCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAG < SRR4302542.6534062/94‑1 (MQ=60)
AGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAA > SRR4302542.1640291/1‑94 (MQ=60)
AGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAA < SRR4302542.2836376/94‑1 (MQ=60)
AGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAA < SRR4302542.4728531/94‑1 (MQ=60)
GCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAA < SRR4302542.5850659/94‑1 (MQ=60)
CCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAA > SRR4302542.4292689/1‑94 (MQ=60)
CCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAA > SRR4302542.6080244/1‑94 (MQ=60)
CGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAA < SRR4302542.2421631/94‑1 (MQ=60)
CGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAA < SRR4302542.1910527/94‑1 (MQ=60)
CGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAA > SRR4302542.7442288/1‑94 (MQ=60)
CGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAA > SRR4302542.6301212/1‑94 (MQ=60)
CGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAA > SRR4302542.661063/1‑94 (MQ=60)
CGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACC < SRR4302542.6196048/94‑1 (MQ=60)
CGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACC > SRR4302542.526483/1‑94 (MQ=60)
GATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCG > SRR4302542.6122524/1‑94 (MQ=60)
GATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCG > SRR4302542.4398304/1‑94 (MQ=60)
GATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCG > SRR4302542.7452227/1‑94 (MQ=60)
ATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGT < SRR4302542.4019796/94‑1 (MQ=60)
ATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGT < SRR4302542.7449974/94‑1 (MQ=60)
TTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTA > SRR4302542.7150632/1‑94 (MQ=60)
TAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACC > SRR4302542.5945638/1‑94 (MQ=60)
AATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCA > SRR4302542.4099904/1‑94 (MQ=60)
AATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCA < SRR4302542.1270784/94‑1 (MQ=60)
ATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAG < SRR4302542.5283805/94‑1 (MQ=60)
TTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGC > SRR4302542.984368/1‑94 (MQ=60)
CAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGAT < SRR4302542.1709690/94‑1 (MQ=60)
AGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATA > SRR4302542.6553555/1‑94 (MQ=60)
AGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATA < SRR4302542.1879144/94‑1 (MQ=60)
GTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATAT < SRR4302542.5801685/94‑1 (MQ=60)
TCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATT < SRR4302542.7413871/94‑1 (MQ=60)
CCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTC < SRR4302542.7299382/94‑1 (MQ=60)
GGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCC < SRR4302542.718310/94‑1 (MQ=60)
GGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCC < SRR4302542.7398930/94‑1 (MQ=60)
GGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCC < SRR4302542.5220043/94‑1 (MQ=60)
GGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCC > SRR4302542.3300257/1‑94 (MQ=60)
GAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCG < SRR4302542.3805242/94‑1 (MQ=60)
GAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCG < SRR4302542.4407960/94‑1 (MQ=60)
GCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAG < SRR4302542.3399595/94‑1 (MQ=60)
GTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACG > SRR4302542.6524671/1‑94 (MQ=60)
GCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCG < SRR4302542.2146575/94‑1 (MQ=60)
GCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCG < SRR4302542.494149/94‑1 (MQ=60)
CGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGC > SRR4302542.807993/1‑94 (MQ=60)
GAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCG > SRR4302542.562462/1‑94 (MQ=60)
GAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCG > SRR4302542.671614/1‑94 (MQ=60)
GAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCG > SRR4302542.2279164/1‑94 (MQ=60)
CTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACTGTACCAGCGATATTCCCGAGACGCTCGCGCCA > SRR4302542.5632799/1‑94 (MQ=60)
TTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCAC < SRR4302542.7338290/94‑1 (MQ=60)
TTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACT > SRR4302542.3411603/1‑94 (MQ=60)
TTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACT > SRR4302542.2205646/1‑94 (MQ=60)
TCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTG < SRR4302542.6709541/94‑1 (MQ=60)
AGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGAT < SRR4302542.3640270/94‑1 (MQ=60)
AGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGAT > SRR4302542.227365/1‑94 (MQ=60)
AGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGAT < SRR4302542.5081380/94‑1 (MQ=60)
CGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTG < SRR4302542.3271434/94‑1 (MQ=60)
GGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCA < SRR4302542.4405435/94‑1 (MQ=60)
CCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGT > SRR4302542.4839678/1‑94 (MQ=60)
CAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGAC > SRR4302542.3061238/1‑94 (MQ=60)
CAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGAC > SRR4302542.3104519/1‑94 (MQ=60)
AATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACG > SRR4302542.6926949/1‑94 (MQ=60)
AATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACG > SRR4302542.5168622/1‑94 (MQ=60)
TTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCC < SRR4302542.5874213/94‑1 (MQ=60)
TTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCC < SRR4302542.5252128/94‑1 (MQ=60)
CAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAA < SRR4302542.7499952/94‑1 (MQ=60)
AAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAAC < SRR4302542.4035469/94‑1 (MQ=60)
AAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAAC > SRR4302542.6767668/1‑94 (MQ=60)
AAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAAC > SRR4302542.2178265/1‑94 (MQ=60)
AGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACT < SRR4302542.5384453/94‑1 (MQ=60)
AGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACT < SRR4302542.3073550/94‑1 (MQ=60)
GGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTG < SRR4302542.6685938/94‑1 (MQ=60)
GGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGA > SRR4302542.5740370/1‑94 (MQ=60)
GGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGA > SRR4302542.4508167/1‑94 (MQ=60)
GCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAA < SRR4302542.3201352/94‑1 (MQ=60)
GCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAA < SRR4302542.962453/94‑1 (MQ=60)
CGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAAC < SRR4302542.7458062/94‑1 (MQ=60)
GAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACT < SRR4302542.5630156/94‑1 (MQ=60)
GAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACT > SRR4302542.3613149/1‑94 (MQ=60)
GAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACT < SRR4302542.7367675/94‑1 (MQ=60)
GAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACT > SRR4302542.4788419/1‑94 (MQ=60)
GAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACT > SRR4302542.2236485/1‑94 (MQ=60)
GAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACT < SRR4302542.162815/94‑1 (MQ=60)
GAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACT > SRR4302542.6461327/1‑94 (MQ=60)
AGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTC < SRR4302542.7234801/94‑1 (MQ=60)
AGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTA > SRR4302542.7435573/1‑94 (MQ=60)
CCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATC > SRR4302542.6011692/1‑94 (MQ=60)
CCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATC < SRR4302542.5889981/94‑1 (MQ=60)
CTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCG < SRR4302542.4993182/94‑1 (MQ=60)
CTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCG > SRR4302542.3080361/1‑94 (MQ=60)
TTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGC < SRR4302542.1077807/94‑1 (MQ=60)
TTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGC < SRR4302542.5749231/94‑1 (MQ=60)
CCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCAT > SRR4302542.6810685/1‑94 (MQ=60)
CCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCAT > SRR4302542.441074/1‑94 (MQ=60)
CCTGGGGGTTTACCGAGAAAAACCGCACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCAT < SRR4302542.4678350/94‑1 (MQ=60)
CTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATC > SRR4302542.1742167/1‑94 (MQ=60)
TGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCA < SRR4302542.728033/94‑1 (MQ=60)
TGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCA > SRR4302542.78791/1‑94 (MQ=60)
TCGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCA < SRR4302542.1014318/94‑1 (MQ=60)
GGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACC < SRR4302542.6075643/94‑1 (MQ=60)
GTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGC > SRR4302542.3988798/1‑94 (MQ=60)
TTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGCT > SRR4302542.1594621/1‑94 (MQ=60)
TTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGCTG < SRR4302542.4197963/94‑1 (MQ=60)
TTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGCTG < SRR4302542.5920433/94‑1 (MQ=60)
TTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGCTG < SRR4302542.1975520/94‑1 (MQ=60)
TGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGCTGG < SRR4302542.5081994/94‑1 (MQ=60)
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TGACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGCTGG > NC_000913/4058234‑4058418
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
