Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,062,187 A→G L387S (TTG→TCG)  b3876 ← putative permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,062,1870AG88.9% 823.2 / 86.6 315L387S (TTG→TCG) b3876putative permease
Reads supporting (aligned to +/- strand):  ref base A (18/17);  new base G (131/149);  total (149/166)
Fisher's exact test for biased strand distribution p-value = 7.20e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.38e-01

Only 100 of 323 total aligned reads displayed.

ATAAAAATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCATTCACCG  >  NC_000913/4062097‑4062279
                                                                                          |                                                                                            
aTAAAAATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCgag                                                                                            >  1:3684678/1‑93 (MQ=255)
   aaaaTGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCgagaag                                                                                         <  2:6353439/93‑1 (MQ=255)
      aTGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCa                                                                                      >  1:5123379/1‑93 (MQ=255)
      aTGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCa                                                                                      <  1:1395244/93‑1 (MQ=255)
          gCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCaa                                                                                  >  1:7509669/1‑93 (MQ=255)
          gCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCaa                                                                                  <  1:528635/93‑1 (MQ=255)
          gCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCaa                                                                                  <  1:2937057/93‑1 (MQ=255)
          gCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAGCaa                                                                                  <  2:6518041/93‑1 (MQ=255)
           cTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAg                                                                                 <  1:6502034/93‑1 (MQ=255)
            tGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGt                                                                                <  2:22734/93‑1 (MQ=255)
             gACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTg                                                                               <  2:890229/93‑1 (MQ=255)
             gACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTg                                                                               >  2:21694/1‑93 (MQ=255)
              aCGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAGCAAGTGc                                                                              <  1:2877259/93‑1 (MQ=255)
                gCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCgg                                                                            >  2:4630353/1‑93 (MQ=255)
                gCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAGCAAGTGCgg                                                                            >  1:4882120/1‑93 (MQ=255)
                   aaCCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAg                                                                         >  2:2556928/1‑93 (MQ=255)
                      ccTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGaaa                                                                      <  2:1706984/93‑1 (MQ=255)
                      ccTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGaaa                                                                      <  1:5353461/93‑1 (MQ=255)
                       cTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAAt                                                                     <  1:5703249/93‑1 (MQ=255)
                       cTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAAt                                                                     >  2:1053654/1‑93 (MQ=255)
                       cTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAAt                                                                     >  2:2974600/1‑93 (MQ=255)
                       cTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAAt                                                                     >  2:1972709/1‑93 (MQ=255)
                        tGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAAtt                                                                    <  1:84636/93‑1 (MQ=255)
                        tGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAAtt                                                                    >  2:7203423/1‑93 (MQ=255)
                        tGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAAtt                                                                    <  2:1441537/93‑1 (MQ=255)
                        tGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAGCAAGTGCGGCAGAAAtt                                                                    >  2:558234/1‑93 (MQ=255)
                         gTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAAttt                                                                   <  2:4175622/93‑1 (MQ=255)
                         gTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAAttt                                                                   >  1:125217/1‑93 (MQ=255)
                         gTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAAttt                                                                   >  1:1898916/1‑93 (MQ=255)
                         gTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAGCAAGTGCGGCAGAAAttt                                                                   >  1:6965907/1‑93 (MQ=255)
                           aaTGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTa                                                                 <  1:1707142/93‑1 (MQ=255)
                           aaTGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAGCAAGTGCGGCAGAAATTTTa                                                                 >  1:7044036/1‑93 (MQ=255)
                             tGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACg                                                               >  1:733107/1‑93 (MQ=255)
                             tGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACg                                                               >  2:7346785/1‑93 (MQ=255)
                                 gCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAaag                                                           >  2:3141747/1‑93 (MQ=255)
                                  cATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAaaga                                                          <  2:4996303/93‑1 (MQ=255)
                                  cATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAaaga                                                          >  1:6859585/1‑93 (MQ=255)
                                   aTCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAaagaa                                                         >  1:3886594/1‑93 (MQ=255)
                                   aTCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAaagaa                                                         <  1:2007100/93‑1 (MQ=255)
                                    tCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAaagaag                                                        <  1:1049987/93‑1 (MQ=255)
                                    tCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAaagaag                                                        <  2:3365032/93‑1 (MQ=255)
                                    tCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCAAGCAAGTGCGCCAGAAATTTTACGAaaaaag                                                        >  1:7104251/1‑93 (MQ=255)
                                      gCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGt                                                      >  2:4429567/1‑93 (MQ=255)
                                        tttGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGtat                                                    >  2:5874811/1‑93 (MQ=255)
                                        tttGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGtat                                                    >  2:3803564/1‑93 (MQ=255)
                                        tttGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGtat                                                    <  1:5419316/93‑1 (MQ=255)
                                         ttGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGtata                                                   <  1:5560801/93‑1 (MQ=255)
                                           gcgcGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAAc                                                 <  2:5199560/93‑1 (MQ=255)
                                           gcgcGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAAc                                                 >  2:5769605/1‑93 (MQ=255)
                                             gcgATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCg                                               >  2:1516663/1‑93 (MQ=255)
                                               gATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGt                                             >  2:47763/1‑93 (MQ=255)
                                               gATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGt                                             >  1:4381641/1‑93 (MQ=255)
                                                aTGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGta                                            <  1:3380452/93‑1 (MQ=255)
                                                 tGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGtat                                           <  2:2796062/93‑1 (MQ=255)
                                                 tGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGtat                                           >  1:6241683/1‑93 (MQ=255)
                                                 tGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGtat                                           >  1:4519564/1‑93 (MQ=255)
                                                 tGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGtat                                           >  2:834887/1‑93 (MQ=255)
                                                   ttGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATaa                                         >  2:1319314/1‑93 (MQ=255)
                                                    tGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATaaa                                        <  1:4326224/93‑1 (MQ=255)
                                                      ggAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACa                                      <  2:61878/93‑1 (MQ=255)
                                                      ggAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACa                                      <  1:3784637/93‑1 (MQ=255)
                                                        aaCATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGa                                    <  1:3051958/93‑1 (MQ=255)
                                                         aCATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGaa                                   <  1:4470754/93‑1 (MQ=255)
                                                         aCATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGaa                                   <  1:3110905/93‑1 (MQ=255)
                                                         aCATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGaa                                   >  1:6431093/1‑93 (MQ=255)
                                                         aCATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGaa                                   <  2:6937992/93‑1 (MQ=255)
                                                            tAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCt                                >  1:3450226/1‑93 (MQ=255)
                                                             aaCCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCtt                               >  2:2714629/1‑93 (MQ=255)
                                                             aaCCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCtt                               <  1:4249230/93‑1 (MQ=255)
                                                              aCCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTc                              <  2:3695916/93‑1 (MQ=255)
                                                              aCCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTc                              <  1:1545878/93‑1 (MQ=255)
                                                              aCCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTc                              <  1:262914/93‑1 (MQ=255)
                                                              aCCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTc                              <  1:6548898/93‑1 (MQ=255)
                                                              aCCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTc                              <  1:6027960/93‑1 (MQ=255)
                                                               ccAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCg                             <  1:6066430/93‑1 (MQ=255)
                                                               ccAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCg                             <  1:7445736/93‑1 (MQ=255)
                                                                cAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCgg                            >  2:5467870/1‑93 (MQ=255)
                                                                  aTTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCa                          >  2:4832308/1‑93 (MQ=255)
                                                                  aTTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCa                          <  1:6005374/93‑1 (MQ=255)
                                                                   tttGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCAc                         >  1:3276121/1‑93 (MQ=255)
                                                                    ttGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACg                        >  1:2140587/1‑93 (MQ=255)
                                                                      gCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGaa                      <  2:2454896/93‑1 (MQ=255)
                                                                        gTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATa                    <  1:2555054/93‑1 (MQ=255)
                                                                         tCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATAc                   <  2:5128438/93‑1 (MQ=255)
                                                                         tCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATAc                   >  2:7459994/1‑93 (MQ=255)
                                                                            gCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCgg                <  2:2098004/93‑1 (MQ=255)
                                                                            gCATAATGCCTGGCAAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCgg                <  2:7130062/93‑1 (MQ=255)
                                                                             cATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGt               <  1:2184941/93‑1 (MQ=255)
                                                                              aTAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGtt              >  2:5960267/1‑93 (MQ=255)
                                                                               tAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGttt             >  2:6143037/1‑93 (MQ=255)
                                                                               tAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGttt             >  1:6910338/1‑93 (MQ=255)
                                                                               tAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGttt             >  2:672189/1‑93 (MQ=255)
                                                                               tAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGttt             >  1:3988768/1‑93 (MQ=255)
                                                                                aaTGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGtttt            <  2:3901778/93‑1 (MQ=255)
                                                                                  tGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTcc          <  2:3258578/93‑1 (MQ=255)
                                                                                    ccTGGCAAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCAt        >  1:3591483/1‑93 (MQ=255)
                                                                                     cTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCAtt       <  2:3432029/93‑1 (MQ=255)
                                                                                     cTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCAtt       >  1:4959714/1‑93 (MQ=255)
                                                                                      tGGCAAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCATTc      <  2:4256740/93‑1 (MQ=255)
                                                                                       ggCAAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCATTCa     <  2:7019158/93‑1 (MQ=255)
                                                                                          |                                                                                            
ATAAAAATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCATTCACCG  >  NC_000913/4062097‑4062279

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CAGATAAAAATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCATTCACCGT  >  NC_000913/4062094‑4062280
                                                                                             |                                                                                             
CAGATAAAAATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCG                                                                                               <  SRR4302542.4449948/94‑1 (MQ=60)
CAGATAAAAATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCG                                                                                               >  SRR4302542.1266147/1‑94 (MQ=60)
CAGATAAAAATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCG                                                                                               >  SRR4302542.4384842/1‑94 (MQ=60)
CAGATAAAAATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCG                                                                                               >  SRR4302542.851686/1‑94 (MQ=60)
CAGATAAAAATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCG                                                                                               >  SRR4302542.1617794/1‑94 (MQ=60)
 AGATAAAAATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGA                                                                                              >  SRR4302542.3166890/1‑94 (MQ=60)
  GATAAAAATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAG                                                                                             >  SRR4302542.3720931/1‑94 (MQ=60)
  GATAAAAATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAG                                                                                             <  SRR4302542.1584404/94‑1 (MQ=60)
   ATAAAAATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGA                                                                                            <  SRR4302542.2164742/94‑1 (MQ=60)
    TAAAAATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAA                                                                                           <  SRR4302542.1727266/94‑1 (MQ=60)
     AAAAATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAG                                                                                          <  SRR4302542.4404037/94‑1 (MQ=60)
        AATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCA                                                                                       <  SRR4302542.5647763/94‑1 (MQ=60)
        AATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCA                                                                                       <  SRR4302542.7163740/94‑1 (MQ=60)
        AATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCA                                                                                       >  SRR4302542.6927534/1‑94 (MQ=60)
        AATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCA                                                                                       >  SRR4302542.14492/1‑94 (MQ=60)
        AATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCA                                                                                       >  SRR4302542.5173133/1‑94 (MQ=60)
         ATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAG                                                                                      <  SRR4302542.7318491/94‑1 (MQ=60)
         ATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAG                                                                                      <  SRR4302542.1407297/94‑1 (MQ=60)
         ATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAAAGCCTGGCAAGAAGCCAG                                                                                      >  SRR4302542.6946273/1‑94 (MQ=60)
          TGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGC                                                                                     >  SRR4302542.1828426/1‑94 (MQ=60)
           GAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCA                                                                                    <  SRR4302542.6080202/94‑1 (MQ=60)
            AGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAA                                                                                   >  SRR4302542.7583528/1‑94 (MQ=60)
             GCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAG                                                                                  <  SRR4302542.533203/94‑1 (MQ=60)
             GCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAG                                                                                  <  SRR4302542.2965186/94‑1 (MQ=60)
              CTGACGCAACCCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGT                                                                                 <  SRR4302542.2399339/94‑1 (MQ=60)
              CTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGT                                                                                 <  SRR4302542.4816516/94‑1 (MQ=60)
              CTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGT                                                                                 <  SRR4302542.6566122/94‑1 (MQ=60)
              CTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGT                                                                                 <  SRR4302542.5723598/94‑1 (MQ=60)
              CTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGT                                                                                 <  SRR4302542.3953918/94‑1 (MQ=60)
               TGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTG                                                                                >  SRR4302542.2602544/1‑94 (MQ=60)
               TGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTG                                                                                <  SRR4302542.2961918/94‑1 (MQ=60)
               TGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTG                                                                                <  SRR4302542.2102530/94‑1 (MQ=60)
                GACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGC                                                                               <  SRR4302542.3312105/94‑1 (MQ=60)
                 ACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAGCAAGTGCG                                                                              <  SRR4302542.2904882/94‑1 (MQ=60)
                  CGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAGCAAGTGCGG                                                                             >  SRR4302542.4929626/1‑94 (MQ=60)
                   GCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGC                                                                            >  SRR4302542.2604264/1‑94 (MQ=60)
                    CAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCA                                                                           <  SRR4302542.288595/94‑1 (MQ=60)
                     AAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAG                                                                          <  SRR4302542.3944272/94‑1 (MQ=60)
                     AAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAG                                                                          >  SRR4302542.1675942/1‑94 (MQ=60)
                     AAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAG                                                                          >  SRR4302542.3745573/1‑94 (MQ=60)
                      AACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGA                                                                         >  SRR4302542.644027/1‑94 (MQ=60)
                        CCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAA                                                                       >  SRR4302542.2120674/1‑94 (MQ=60)
                        CCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAA                                                                       >  SRR4302542.3686746/1‑94 (MQ=60)
                         CCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAAT                                                                      >  SRR4302542.5299942/1‑94 (MQ=60)
                         CCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAAT                                                                      <  SRR4302542.5405481/94‑1 (MQ=60)
                         CCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAAT                                                                      >  SRR4302542.4942897/1‑94 (MQ=60)
                          CTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATT                                                                     >  SRR4302542.609649/1‑94 (MQ=60)
                          CTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATT                                                                     <  SRR4302542.5758606/94‑1 (MQ=60)
                           TGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTT                                                                    <  SRR4302542.85342/94‑1 (MQ=60)
                           TGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTT                                                                    >  SRR4302542.1915339/1‑94 (MQ=60)
                           TGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTT                                                                    >  SRR4302542.126239/1‑94 (MQ=60)
                           TGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAGCAAGTGCGGCAGAAATTT                                                                    >  SRR4302542.3479221/1‑94 (MQ=60)
                           TGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAGCAAGTGCGGCAGAAATTT                                                                    >  SRR4302542.7034346/1‑94 (MQ=60)
                            GTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTT                                                                   <  SRR4302542.6974873/94‑1 (MQ=60)
                            GTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTT                                                                   <  SRR4302542.5535846/94‑1 (MQ=60)
                            GTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTT                                                                   <  SRR4302542.4538142/94‑1 (MQ=60)
                             TAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTA                                                                  >  SRR4302542.5349991/1‑94 (MQ=60)
                             TAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTA                                                                  <  SRR4302542.4542211/94‑1 (MQ=60)
                             TAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAGCAAGTGCGGCAGAAATTTTA                                                                  >  SRR4302542.7113220/1‑94 (MQ=60)
                              AATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATTATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTAC                                                                 <  SRR4302542.6284065/94‑1 (MQ=60)
                              AATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTAC                                                                 <  SRR4302542.1721939/94‑1 (MQ=60)
                               ATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACG                                                                >  SRR4302542.739461/1‑94 (MQ=60)
                               ATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACG                                                                <  SRR4302542.6587054/94‑1 (MQ=60)
                               ATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACG                                                                <  SRR4302542.5035665/94‑1 (MQ=60)
                               ATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACG                                                                >  SRR4302542.3584142/1‑94 (MQ=60)
                               ATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACG                                                                >  SRR4302542.4366132/1‑94 (MQ=60)
                                TGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGA                                                               <  SRR4302542.5408784/94‑1 (MQ=60)
                                 GTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAA                                                              <  SRR4302542.436590/94‑1 (MQ=60)
                                 GTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAA                                                              >  SRR4302542.1977933/1‑94 (MQ=60)
                                 GTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAA                                                              >  SRR4302542.1727456/1‑94 (MQ=60)
                                    GCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGA                                                           >  SRR4302542.7052584/1‑94 (MQ=60)
                                    GCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGA                                                           >  SRR4302542.4948616/1‑94 (MQ=60)
                                    GCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGA                                                           >  SRR4302542.6926986/1‑94 (MQ=60)
                                    GCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGA                                                           <  SRR4302542.5958965/94‑1 (MQ=60)
                                    GCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGA                                                           <  SRR4302542.2754301/94‑1 (MQ=60)
                                     CATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAA                                                          >  SRR4302542.809681/1‑94 (MQ=60)
                                     CATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAA                                                          <  SRR4302542.3087769/94‑1 (MQ=60)
                                     CATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAA                                                          >  SRR4302542.6033411/1‑94 (MQ=60)
                                     CATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAA                                                          >  SRR4302542.3924966/1‑94 (MQ=60)
                                      ATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAG                                                         >  SRR4302542.1095064/1‑94 (MQ=60)
                                      ATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAG                                                         <  SRR4302542.2024437/94‑1 (MQ=60)
                                      ATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAG                                                         >  SRR4302542.308137/1‑94 (MQ=60)
                                      ATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCAAGCAAGTGCGCCAGAAATTTTACGAAAAAAG                                                         >  SRR4302542.7173988/1‑94 (MQ=60)
                                      ATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAG                                                         <  SRR4302542.2222168/94‑1 (MQ=60)
                                       TCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGG                                                        >  SRR4302542.531998/1‑94 (MQ=60)
                                       TCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGG                                                        <  SRR4302542.1059024/94‑1 (MQ=60)
                                       TCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGG                                                        <  SRR4302542.5669466/94‑1 (MQ=60)
                                        CGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGTAGAAATTTTACGAAAGAAGGT                                                       <  SRR4302542.3128190/94‑1 (MQ=60)
                                         GCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTA                                                      <  SRR4302542.3001176/94‑1 (MQ=60)
                                         GCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTA                                                      >  SRR4302542.7238484/1‑94 (MQ=60)
                                         GCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTA                                                      <  SRR4302542.6101094/94‑1 (MQ=60)
                                           TTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATA                                                    >  SRR4302542.4489149/1‑94 (MQ=60)
                                           TTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATA                                                    <  SRR4302542.5471936/94‑1 (MQ=60)
                                            TTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAA                                                   <  SRR4302542.5614829/94‑1 (MQ=60)
                                              GCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACC                                                 <  SRR4302542.6572576/94‑1 (MQ=60)
                                              GCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTCACGAAAGAAGGTATAACC                                                 <  SRR4302542.7190403/94‑1 (MQ=60)
                                               CGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCG                                                <  SRR4302542.6460897/94‑1 (MQ=60)
                                               CGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCG                                                >  SRR4302542.5257823/1‑94 (MQ=60)
                                                 CGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGT                                              <  SRR4302542.1380985/94‑1 (MQ=60)
                                                 CGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGT                                              >  SRR4302542.871409/1‑94 (MQ=60)
                                                 CGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGT                                              >  SRR4302542.4424637/1‑94 (MQ=60)
                                                   ATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTAT                                            <  SRR4302542.3412211/94‑1 (MQ=60)
                                                   ATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTAT                                            >  SRR4302542.148543/1‑94 (MQ=60)
                                                   ATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTAT                                            >  SRR4302542.4563844/1‑94 (MQ=60)
                                                   ATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTAT                                            >  SRR4302542.6303180/1‑94 (MQ=60)
                                                    TGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATA                                           <  SRR4302542.7063883/94‑1 (MQ=60)
                                                       TGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAAC                                        <  SRR4302542.4368758/94‑1 (MQ=60)
                                                       TGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAAC                                        <  SRR4302542.5345785/94‑1 (MQ=60)
                                                        GGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACA                                       >  SRR4302542.876377/1‑94 (MQ=60)
                                                         GGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAG                                      <  SRR4302542.2215942/94‑1 (MQ=60)
                                                         GGAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAG                                      <  SRR4302542.3822073/94‑1 (MQ=60)
                                                         GGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAG                                      <  SRR4302542.5535100/94‑1 (MQ=60)
                                                          GAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGA                                     <  SRR4302542.3294990/94‑1 (MQ=60)
                                                          GAACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGA                                     >  SRR4302542.744527/1‑94 (MQ=60)
                                                           AACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAA                                    >  SRR4302542.6494455/1‑94 (MQ=60)
                                                           AACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAA                                    <  SRR4302542.3222416/94‑1 (MQ=60)
                                                           AACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAA                                    <  SRR4302542.3081083/94‑1 (MQ=60)
                                                           AACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAA                                    <  SRR4302542.7133063/94‑1 (MQ=60)
                                                           AACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAA                                    >  SRR4302542.6692835/1‑94 (MQ=60)
                                                            ACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAAC                                   <  SRR4302542.3140465/94‑1 (MQ=60)
                                                            ACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAAC                                   <  SRR4302542.4145144/94‑1 (MQ=60)
                                                            ACATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAAC                                   <  SRR4302542.4514608/94‑1 (MQ=60)
                                                             CATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACC                                  <  SRR4302542.6545539/94‑1 (MQ=60)
                                                             CATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACC                                  <  SRR4302542.2187057/94‑1 (MQ=60)
                                                              ATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCT                                 >  SRR4302542.3482506/1‑94 (MQ=60)
                                                              ATAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCT                                 >  SRR4302542.4769148/1‑94 (MQ=60)
                                                               TAACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTT                                <  SRR4302542.6552884/94‑1 (MQ=60)
                                                                AACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTC                               <  SRR4302542.4291094/94‑1 (MQ=60)
                                                                AACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTC                               <  SRR4302542.7536031/94‑1 (MQ=60)
                                                                AACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTC                               <  SRR4302542.6877402/94‑1 (MQ=60)
                                                                 ACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCG                              <  SRR4302542.6613466/94‑1 (MQ=60)
                                                                 ACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCG                              <  SRR4302542.1559218/94‑1 (MQ=60)
                                                                 ACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCG                              <  SRR4302542.6086329/94‑1 (MQ=60)
                                                                 ACCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCG                              <  SRR4302542.265159/94‑1 (MQ=60)
                                                                  CCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGG                             >  SRR4302542.3587692/1‑94 (MQ=60)
                                                                  CCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGG                             <  SRR4302542.3769237/94‑1 (MQ=60)
                                                                  CCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGG                             <  SRR4302542.6125185/94‑1 (MQ=60)
                                                                  CCAATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGG                             <  SRR4302542.7518636/94‑1 (MQ=60)
                                                                     ATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCAC                          >  SRR4302542.3307038/1‑94 (MQ=60)
                                                                     ATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCAC                          >  SRR4302542.811025/1‑94 (MQ=60)
                                                                     ATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCAC                          <  SRR4302542.6063530/94‑1 (MQ=60)
                                                                     ATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCAC                          >  SRR4302542.3963427/1‑94 (MQ=60)
                                                                     ATTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCAC                          <  SRR4302542.3631352/94‑1 (MQ=60)
                                                                      TTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACG                         <  SRR4302542.1121407/94‑1 (MQ=60)
                                                                      TTTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACG                         >  SRR4302542.2159056/1‑94 (MQ=60)
                                                                       TTGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGA                        >  SRR4302542.4563373/1‑94 (MQ=60)
                                                                        TGCGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAA                       >  SRR4302542.5063932/1‑94 (MQ=60)
                                                                          CGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATA                     >  SRR4302542.5464236/1‑94 (MQ=60)
                                                                          CGTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATA                     <  SRR4302542.292267/94‑1 (MQ=60)
                                                                           GTCAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATAC                    <  SRR4302542.2579823/94‑1 (MQ=60)
                                                                           GTCAGCATAATGCCTGGCAAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATAC                    >  SRR4302542.6184012/1‑94 (MQ=60)
                                                                             CAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCG                  <  SRR4302542.4096432/94‑1 (MQ=60)
                                                                             CAGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCG                  <  SRR4302542.7473770/94‑1 (MQ=60)
                                                                              AGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGG                 >  SRR4302542.3438386/1‑94 (MQ=60)
                                                                              AGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGG                 >  SRR4302542.1279518/1‑94 (MQ=60)
                                                                              AGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGG                 >  SRR4302542.436229/1‑94 (MQ=60)
                                                                              AGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGG                 >  SRR4302542.3512494/1‑94 (MQ=60)
                                                                              AGCATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGG                 <  SRR4302542.6084348/94‑1 (MQ=60)
                                                                                CATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTT               >  SRR4302542.7007317/1‑94 (MQ=60)
                                                                                CATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTT               >  SRR4302542.752033/1‑94 (MQ=60)
                                                                                CATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTT               <  SRR4302542.2203763/94‑1 (MQ=60)
                                                                                 ATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTT              >  SRR4302542.6978181/1‑94 (MQ=60)
                                                                                 ATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTT              >  SRR4302542.4028120/1‑94 (MQ=60)
                                                                                 ATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTT              >  SRR4302542.3892031/1‑94 (MQ=60)
                                                                                 ATAATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTT              <  SRR4302542.3850321/94‑1 (MQ=60)
                                                                                   AATGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTC            >  SRR4302542.1580158/1‑94 (MQ=60)
                                                                                     TGCCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCA          >  SRR4302542.4463035/1‑94 (MQ=60)
                                                                                      GCCTGGCAAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCAT         >  SRR4302542.3624980/1‑94 (MQ=60)
                                                                                       CCTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCATT        >  SRR4302542.5007894/1‑94 (MQ=60)
                                                                                       CCTGGCAAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCATT        <  SRR4302542.7022456/94‑1 (MQ=60)
                                                                                        CTGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCATTC       >  SRR4302542.6439036/1‑94 (MQ=60)
                                                                                         TGGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCATTCA      <  SRR4302542.336069/94‑1 (MQ=60)
                                                                                          GGCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCATTCAC     >  SRR4302542.3424727/1‑94 (MQ=60)
                                                                                           GCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCATTCACC    <  SRR4302542.5746522/94‑1 (MQ=60)
                                                                                           GCGAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCATTCACC    <  SRR4302542.4348551/94‑1 (MQ=60)
                                                                                            CAAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCATTCACCG   >  SRR4302542.194667/1‑94 (MQ=60)
                                                                                             GAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCATTCACCGT  <  SRR4302542.6437516/94‑1 (MQ=60)
                                                                                             GAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCATTCACCGT  >  SRR4302542.7590017/1‑94 (MQ=60)
                                                                                             GAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCATTCACCGT  >  SRR4302542.5391562/1‑94 (MQ=60)
                                                                                             AAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCATTCACCGT  <  SRR4302542.3061754/94‑1 (MQ=60)
                                                                                             AAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCATTCACCGT  >  SRR4302542.3097885/1‑94 (MQ=60)
                                                                                             |                                                                                             
CAGATAAAAATGAGCTGACGCAAACCCTGTAATGTCGCATCGCTTTGCGCGATGTTGGGAACATAACCAATTTGCGTCAGCATAATGCCTGGCAAGAAGCCAGCAAGTGCGGCAGAAATTTTACGAAAGAAGGTATAACCGGTATAAACAGAACCTTCGGCACGAATACCGGTTTTCCATTCACCGT  >  NC_000913/4062094‑4062280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: