Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,139,436 G→A intergenic (‑1/‑1) ptsA ← / → yijI PEP‑protein phosphotransferase system enzyme I/IIA/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,139,4360GA85.6% 913.2 / 95.8 319intergenic (‑1/‑1)ptsA/yijIPEP‑protein phosphotransferase system enzyme I/IIA/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (26/20);  new base A (146/127);  total (172/147)
Fisher's exact test for biased strand distribution p-value = 7.51e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

Only 100 of 324 total aligned reads displayed.

AACGCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAGCGGCGCATC  >  NC_000913/4139346‑4139528
                                                                                          |                                                                                             
aaCGCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGt                                                                                             <  1:3638978/93‑1 (MQ=255)
  cGCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGTTCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGc                                                                                           >  2:5245299/1‑93 (MQ=255)
  cGCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGc                                                                                           <  1:4079540/93‑1 (MQ=255)
   gCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCg                                                                                          <  1:1124235/93‑1 (MQ=255)
   gCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCg                                                                                          >  1:870862/1‑93 (MQ=255)
    ccTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCgg                                                                                         >  1:5357879/1‑93 (MQ=255)
    ccTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCgg                                                                                         <  2:1735576/93‑1 (MQ=255)
     cTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCggg                                                                                        >  2:1344251/1‑93 (MQ=255)
      tttGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGgc                                                                                       >  2:5674864/1‑93 (MQ=255)
       ttGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGgcg                                                                                      <  1:489660/93‑1 (MQ=255)
            tGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGAt                                                                                >  2:5473193/1‑93 (MQ=255)
            tGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGAt                                                                                >  1:4520575/1‑93 (MQ=255)
             gCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATa                                                                               >  1:4739627/1‑93 (MQ=255)
                gggaGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAAtt                                                                            <  2:4339916/90‑1 (MQ=255)
                   aGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGc                                                                         >  1:2672464/1‑93 (MQ=255)
                   aGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGc                                                                         <  2:6794788/93‑1 (MQ=255)
                    gATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCg                                                                        <  2:2645760/93‑1 (MQ=255)
                     aTTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCgg                                                                       >  2:2766010/1‑93 (MQ=255)
                      ttACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGa                                                                      <  1:7438924/93‑1 (MQ=255)
                      ttACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGa                                                                      >  1:6395939/1‑93 (MQ=255)
                      ttACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGa                                                                      <  1:4807730/93‑1 (MQ=255)
                          ccAGCGCTTTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCa                                                                  >  2:2365387/1‑93 (MQ=255)
                            aGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGa                                                                <  2:410436/93‑1 (MQ=255)
                            aGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGa                                                                >  1:7182271/1‑93 (MQ=255)
                             gcgcATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGAt                                                               >  2:6915104/1‑93 (MQ=255)
                             gcgcATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGAt                                                               <  1:1889095/93‑1 (MQ=255)
                              cgcATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGAtt                                                              <  1:4595925/93‑1 (MQ=255)
                               gcATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTg                                                             <  2:228810/93‑1 (MQ=255)
                                cATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTgg                                                            <  1:1046609/93‑1 (MQ=255)
                                cATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTgg                                                            >  1:4284746/1‑93 (MQ=255)
                                 aTTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGt                                                           <  2:4836484/93‑1 (MQ=255)
                                  ttGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTc                                                          >  1:5088225/1‑93 (MQ=255)
                                  ttGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTc                                                          >  1:6100827/1‑93 (MQ=255)
                                   tGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCa                                                         <  2:3420243/93‑1 (MQ=255)
                                      gaTCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTg                                                      >  1:1711935/1‑93 (MQ=255)
                                       aTCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGa                                                     <  2:6340673/93‑1 (MQ=255)
                                       aTCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGa                                                     >  2:3150086/1‑93 (MQ=255)
                                       aTCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGa                                                     <  2:3797543/93‑1 (MQ=255)
                                        tCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGaa                                                    <  2:2093198/93‑1 (MQ=255)
                                        tCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGaa                                                    >  2:1559616/1‑93 (MQ=255)
                                          tAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAAc                                                  >  2:1048399/1‑93 (MQ=255)
                                          tAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAAc                                                  <  2:7328162/93‑1 (MQ=255)
                                          tAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAAc                                                  <  1:3745926/93‑1 (MQ=255)
                                            aagaagAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCg                                                >  2:1197475/1‑93 (MQ=255)
                                              gaagaGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGc                                              >  1:3291558/1‑93 (MQ=255)
                                              gaagaGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGc                                              >  2:1868775/1‑93 (MQ=255)
                                              gaagaGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGc                                              >  2:4451109/1‑93 (MQ=255)
                                              gaagaGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGc                                              >  2:6295808/1‑93 (MQ=255)
                                               aagaGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCa                                             <  1:5562239/93‑1 (MQ=255)
                                               aagaGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCa                                             <  2:5842460/93‑1 (MQ=255)
                                               aagaGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGACa                                             <  2:4732854/93‑1 (MQ=255)
                                                agagATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAg                                            >  1:3112842/1‑93 (MQ=255)
                                                 gagaTCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGt                                           <  1:1004703/93‑1 (MQ=255)
                                                 gagaTCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGt                                           <  2:2921262/93‑1 (MQ=255)
                                                  agaTCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTg                                          <  2:4040834/93‑1 (MQ=255)
                                                   gaTCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTgg                                         >  2:2965727/1‑93 (MQ=255)
                                                    aTCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGt                                        <  2:5293527/93‑1 (MQ=255)
                                                    aTCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGt                                        >  2:2181371/1‑93 (MQ=255)
                                                      cGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTc                                      <  1:1335807/93‑1 (MQ=255)
                                                       ggCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTcc                                     <  2:7474617/93‑1 (MQ=255)
                                                        gCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCa                                    <  1:6712710/93‑1 (MQ=255)
                                                           tCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGtt                                 >  2:3100858/1‑93 (MQ=255)
                                                           tCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGtt                                 >  2:1448447/1‑93 (MQ=255)
                                                           tCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGtt                                 >  1:1603082/1‑93 (MQ=255)
                                                           tCAGAATGCCGCCTCCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGtt                                 >  2:3350247/1‑93 (MQ=255)
                                                            cAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTc                                <  2:6892837/93‑1 (MQ=255)
                                                            cAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTc                                <  1:5221240/93‑1 (MQ=255)
                                                              gAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGt                              <  2:6024184/93‑1 (MQ=255)
                                                              gAATACCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGt                              >  1:5998706/1‑93 (MQ=255)
                                                                aggccgccTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCa                            <  2:6760188/91‑1 (MQ=255)
                                                                aTGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCa                            <  2:7038083/93‑1 (MQ=255)
                                                                 tGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTGAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAg                           >  1:3494457/1‑93 (MQ=255)
                                                                 tGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGAGTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAg                           >  1:7373980/1‑93 (MQ=255)
                                                                   ccgccTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGAt                         >  2:799098/1‑93 (MQ=255)
                                                                    cgccTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGAtt                        >  1:4996998/1‑93 (MQ=255)
                                                                    cgccTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGAtt                        <  2:4611893/93‑1 (MQ=255)
                                                                      ccTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTa                      >  1:2887228/1‑93 (MQ=255)
                                                                       cTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTaa                     >  2:2867171/1‑93 (MQ=255)
                                                                       cTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTaa                     >  1:577761/1‑93 (MQ=255)
                                                                        tGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAAc                    <  1:6509459/93‑1 (MQ=255)
                                                                        tGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAAc                    <  2:3227306/93‑1 (MQ=255)
                                                                        tGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAAc                    >  1:6964760/1‑93 (MQ=255)
                                                                           aCTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTc                 <  2:1083772/93‑1 (MQ=255)
                                                                           aCTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTc                 >  1:2080108/1‑93 (MQ=255)
                                                                           aCTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTc                 >  1:3851147/1‑93 (MQ=255)
                                                                           aCTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTc                 >  2:3496614/1‑93 (MQ=255)
                                                                           aCTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTc                 >  1:3394364/1‑93 (MQ=255)
                                                                           aCTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCCTCAGATTTAACTTc                 <  2:6445461/93‑1 (MQ=255)
                                                                            cTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTcc                >  2:5596351/1‑93 (MQ=255)
                                                                            cTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTcc                >  1:5632750/1‑93 (MQ=255)
                                                                            cTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTcc                >  2:4500335/1‑93 (MQ=255)
                                                                             tACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCg               >  2:3845522/1‑93 (MQ=255)
                                                                             tACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCg               >  1:5886468/1‑93 (MQ=255)
                                                                              aCCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGc              >  1:2799458/1‑93 (MQ=255)
                                                                                cGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCa            <  2:2598132/93‑1 (MQ=255)
                                                                                cGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCa            <  1:4031102/93‑1 (MQ=255)
                                                                                  cTGCACACAGTGCGGGCGCGGGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAg           >  1:2344559/1‑93 (MQ=255)
                                                                                   tGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAgcg         >  2:503742/1‑93 (MQ=255)
                                                                                   tGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAgcg         >  1:5458865/1‑93 (MQ=255)
                                                                                     cacacaGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAgcggc       <  2:1634304/93‑1 (MQ=255)
                                                                                          |                                                                                             
AACGCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAGCGGCGCATC  >  NC_000913/4139346‑4139528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GTCAACGCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAGCGGCGCATCG  >  NC_000913/4139343‑4139529
                                                                                             |                                                                                              
GTCAACGCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACA                                                                                                >  SRR4302542.4212151/1‑94 (MQ=60)
GTCAACGCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACA                                                                                                >  SRR4302542.7297550/1‑94 (MQ=60)
GTCAACGCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACA                                                                                                <  SRR4302542.4583529/94‑1 (MQ=60)
GTCAACGCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACA                                                                                                >  SRR4302542.2498496/1‑94 (MQ=60)
GTCAACGCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACA                                                                                                >  SRR4302542.5003425/1‑94 (MQ=60)
GTCAACGCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATAGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACA                                                                                                <  SRR4302542.4704609/94‑1 (MQ=60)
 TCAACGCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAG                                                                                               <  SRR4302542.4305385/94‑1 (MQ=60)
  CAACGCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGT                                                                                              <  SRR4302542.4007985/94‑1 (MQ=60)
  CAACGCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGT                                                                                              <  SRR4302542.3290167/94‑1 (MQ=60)
  CAACGCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGT                                                                                              >  SRR4302542.2614148/1‑94 (MQ=60)
   AACGCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTG                                                                                             <  SRR4302542.3672909/94‑1 (MQ=60)
   AACGCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTG                                                                                             <  SRR4302542.6975107/94‑1 (MQ=60)
   AACGCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTG                                                                                             >  SRR4302542.386846/1‑94 (MQ=60)
     CGCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCG                                                                                           <  SRR4302542.4119747/94‑1 (MQ=60)
     CGCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCG                                                                                           <  SRR4302542.4578456/94‑1 (MQ=60)
     CGCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCG                                                                                           >  SRR4302542.878371/1‑94 (MQ=60)
      GCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGG                                                                                          <  SRR4302542.1133838/94‑1 (MQ=60)
      GCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGG                                                                                          >  SRR4302542.5535805/1‑94 (MQ=60)
      GCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGG                                                                                          >  SRR4302542.5409955/1‑94 (MQ=60)
       CCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGG                                                                                         <  SRR4302542.3149577/94‑1 (MQ=60)
          TTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC                                                                                      <  SRR4302542.493888/94‑1 (MQ=60)
            GGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GG                                                                                   >  SRR4302542.6160586/1‑94 (MQ=60)
              CTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGAT                                                                                 <  SRR4302542.5663969/94‑1 (MQ=60)
              CTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGAT                                                                                 >  SRR4302542.4564864/1‑94 (MQ=60)
               TGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATA                                                                                >  SRR4302542.1661787/1‑94 (MQ=60)
               TGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATA                                                                                >  SRR4302542.4785839/1‑94 (MQ=60)
                  GGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATT                                                                             >  SRR4302542.5900383/1‑94 (MQ=60)
                  GGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATT                                                                             >  SRR4302542.451435/1‑94 (MQ=60)
                  GGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATT                                                                             <  SRR4302542.3359/94‑1 (MQ=60)
                   GGAAGATTACCCAGCGCATTGAGATGTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTT                                                                            <  SRR4302542.5385274/94‑1 (MQ=60)
                   GGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTT                                                                            >  SRR4302542.7342675/1‑94 (MQ=60)
                   GGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTT                                                                            <  SRR4302542.784432/94‑1 (MQ=60)
                    GAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTG                                                                           >  SRR4302542.5823173/1‑94 (MQ=60)
                     AAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGC                                                                          >  SRR4302542.2698250/1‑94 (MQ=60)
                     AAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGC                                                                          <  SRR4302542.499481/94‑1 (MQ=60)
                     AAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGC                                                                          <  SRR4302542.346017/94‑1 (MQ=60)
                     AAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGACTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGC                                                                          >  SRR4302542.486993/1‑94 (MQ=60)
                      AGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCG                                                                         >  SRR4302542.3683424/1‑94 (MQ=60)
                      AGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCG                                                                         <  SRR4302542.2129918/94‑1 (MQ=60)
                      AGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCG                                                                         <  SRR4302542.6460156/94‑1 (MQ=60)
                        ATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGA                                                                       >  SRR4302542.6458949/1‑94 (MQ=60)
                         TTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGAT                                                                      <  SRR4302542.7511725/94‑1 (MQ=60)
                         TTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGAT                                                                      <  SRR4302542.2798190/94‑1 (MQ=60)
                         TTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGAT                                                                      <  SRR4302542.4854563/94‑1 (MQ=60)
                          TACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATT                                                                     <  SRR4302542.2944209/94‑1 (MQ=60)
                          TACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATT                                                                     >  SRR4302542.707510/1‑94 (MQ=60)
                           ACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTC                                                                    >  SRR4302542.47384/1‑94 (MQ=60)
                           ACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTC                                                                    >  SRR4302542.342184/1‑94 (MQ=60)
                           ACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTC                                                                    >  SRR4302542.2049305/1‑94 (MQ=60)
                              CAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGA                                                                 >  SRR4302542.7252705/1‑94 (MQ=60)
                               AGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGAT                                                                <  SRR4302542.2882952/94‑1 (MQ=60)
                               AGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGAT                                                                >  SRR4302542.5950630/1‑94 (MQ=60)
                                GCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATT                                                               <  SRR4302542.4693051/94‑1 (MQ=60)
                                GCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATT                                                               <  SRR4302542.1905444/94‑1 (MQ=60)
                                 CGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTG                                                              <  SRR4302542.4640866/94‑1 (MQ=60)
                                 CGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTG                                                              <  SRR4302542.989545/94‑1 (MQ=60)
                                  GCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGG                                                             >  SRR4302542.4326889/1‑94 (MQ=60)
                                   CATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGT                                                            <  SRR4302542.1055590/94‑1 (MQ=60)
                                   CATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGT                                                            >  SRR4302542.1038890/1‑94 (MQ=60)
                                    ATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTC                                                           <  SRR4302542.3613962/94‑1 (MQ=60)
                                    ATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTC                                                           >  SRR4302542.6159870/1‑94 (MQ=60)
                                    ATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTC                                                           >  SRR4302542.5137682/1‑94 (MQ=60)
                                    ATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTC                                                           <  SRR4302542.5864947/94‑1 (MQ=60)
                                     TTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCA                                                          >  SRR4302542.146411/1‑94 (MQ=60)
                                     TTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCA                                                          <  SRR4302542.7381668/94‑1 (MQ=60)
                                     TTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCA                                                          >  SRR4302542.442418/1‑94 (MQ=60)
                                      TGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAG                                                         <  SRR4302542.3853581/94‑1 (MQ=60)
                                       GAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGT                                                        <  SRR4302542.5367611/94‑1 (MQ=60)
                                        AGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTG                                                       >  SRR4302542.1726808/1‑94 (MQ=60)
                                        AGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTG                                                       >  SRR4302542.1650567/1‑94 (MQ=60)
                                        AGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTG                                                       >  SRR4302542.4308989/1‑94 (MQ=60)
                                        AGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTG                                                       <  SRR4302542.209187/94‑1 (MQ=60)
                                        AGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTG                                                       <  SRR4302542.5725121/94‑1 (MQ=60)
                                         GATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGA                                                      <  SRR4302542.3057820/94‑1 (MQ=60)
                                           TCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAA                                                    >  SRR4302542.3735726/1‑94 (MQ=60)
                                            CTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAAC                                                   <  SRR4302542.3238117/94‑1 (MQ=60)
                                            CTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAAC                                                   >  SRR4302542.4819978/1‑94 (MQ=60)
                                             TAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACC                                                  <  SRR4302542.4081591/94‑1 (MQ=60)
                                             TAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACC                                                  <  SRR4302542.3782997/94‑1 (MQ=60)
                                              AAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCG                                                 >  SRR4302542.4286644/1‑94 (MQ=60)
                                              AAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCG                                                 <  SRR4302542.5053964/94‑1 (MQ=60)
                                                AGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGC                                               >  SRR4302542.3322627/1‑94 (MQ=60)
                                                AGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGC                                               >  SRR4302542.3935002/1‑94 (MQ=60)
                                                AGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGC                                               >  SRR4302542.4991089/1‑94 (MQ=60)
                                                 GAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCA                                              <  SRR4302542.809464/94‑1 (MQ=60)
                                                  AAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAG                                             >  SRR4302542.3142419/1‑94 (MQ=60)
                                                  AAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAG                                             <  SRR4302542.5616284/94‑1 (MQ=60)
                                                    GAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTG                                           <  SRR4302542.1013355/94‑1 (MQ=60)
                                                     AGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGG                                          >  SRR4302542.3688027/1‑94 (MQ=60)
                                                      GATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGT                                         >  SRR4302542.3288974/1‑94 (MQ=60)
                                                      GATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGT                                         <  SRR4302542.6329422/94‑1 (MQ=60)
                                                       ATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTT                                        >  SRR4302542.6590930/1‑94 (MQ=60)
                                                        TCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTC                                       <  SRR4302542.7483601/94‑1 (MQ=60)
                                                         CGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCC                                      <  SRR4302542.1347308/94‑1 (MQ=60)
                                                           GCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAG                                    <  SRR4302542.266996/94‑1 (MQ=60)
                                                           GCGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAG                                    <  SRR4302542.6778830/94‑1 (MQ=60)
                                                            CGTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGT                                   >  SRR4302542.7145586/1‑94 (MQ=60)
                                                             GTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTT                                  >  SRR4302542.4932027/1‑94 (MQ=60)
                                                             GTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTT                                  >  SRR4302542.1616928/1‑94 (MQ=60)
                                                             GTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTT                                  >  SRR4302542.6508003/1‑94 (MQ=60)
                                                             GTCAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTT                                  >  SRR4302542.1891570/1‑94 (MQ=60)
                                                               CAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCG                                <  SRR4302542.6114979/94‑1 (MQ=60)
                                                               CAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCG                                <  SRR4302542.5085402/94‑1 (MQ=60)
                                                               CAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCG                                <  SRR4302542.5272014/94‑1 (MQ=60)
                                                               CAGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCG                                <  SRR4302542.5707457/94‑1 (MQ=60)
                                                                AGAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGT                               >  SRR4302542.3619047/1‑94 (MQ=60)
                                                                AGAATACCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGT                               >  SRR4302542.6056803/1‑94 (MQ=60)
                                                                 GAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTC                              <  SRR4302542.4277851/94‑1 (MQ=60)
                                                                 GAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTC                              >  SRR4302542.3522482/1‑94 (MQ=60)
                                                                 GAATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTC                              >  SRR4302542.1049283/1‑94 (MQ=60)
                                                                  AATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCA                             >  SRR4302542.1091837/1‑94 (MQ=60)
                                                                   ATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTGAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAG                            >  SRR4302542.3527142/1‑94 (MQ=60)
                                                                   ATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAG                            <  SRR4302542.5685920/94‑1 (MQ=60)
                                                                   ATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAG                            <  SRR4302542.5505538/94‑1 (MQ=60)
                                                                   ATGCCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGAGTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAG                            >  SRR4302542.7446189/1‑94 (MQ=60)
                                                                      CCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATT                         >  SRR4302542.1735890/1‑94 (MQ=60)
                                                                      CCGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATT                         >  SRR4302542.5045545/1‑94 (MQ=60)
                                                                       CGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTT                        >  SRR4302542.1160435/1‑94 (MQ=60)
                                                                       CGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTT                        >  SRR4302542.3951065/1‑94 (MQ=60)
                                                                       CGCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTT                        >  SRR4302542.7180013/1‑94 (MQ=60)
                                                                        GCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTA                       <  SRR4302542.5363126/94‑1 (MQ=60)
                                                                        GCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTA                       >  SRR4302542.7471264/1‑94 (MQ=60)
                                                                        GCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTA                       >  SRR4302542.2914951/1‑94 (MQ=60)
                                                                        GCCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTA                       >  SRR4302542.2275882/1‑94 (MQ=60)
                                                                         CCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAA                      >  SRR4302542.582761/1‑94 (MQ=60)
                                                                         CCTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAA                      >  SRR4302542.5536865/1‑94 (MQ=60)
                                                                          CTGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAAC                     >  SRR4302542.7033187/1‑94 (MQ=60)
                                                                           TGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACT                    >  SRR4302542.2757348/1‑94 (MQ=60)
                                                                           TGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACT                    <  SRR4302542.6573620/94‑1 (MQ=60)
                                                                           TGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACT                    <  SRR4302542.4572693/94‑1 (MQ=60)
                                                                           TGCACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACT                    <  SRR4302542.1653654/94‑1 (MQ=60)
                                                                             CACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTC                  >  SRR4302542.2098069/1‑94 (MQ=60)
                                                                             CACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTC                  >  SRR4302542.3889192/1‑94 (MQ=60)
                                                                             CACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTC                  >  SRR4302542.3426210/1‑94 (MQ=60)
                                                                             CACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTC                  >  SRR4302542.1315010/1‑94 (MQ=60)
                                                                              ACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCC                 >  SRR4302542.5687446/1‑94 (MQ=60)
                                                                              ACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCC                 >  SRR4302542.5477251/1‑94 (MQ=60)
                                                                              ACTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCC                 >  SRR4302542.2692083/1‑94 (MQ=60)
                                                                               CTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCG                <  SRR4302542.4798867/94‑1 (MQ=60)
                                                                               CTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCG                >  SRR4302542.5943519/1‑94 (MQ=60)
                                                                               CTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCG                >  SRR4302542.6677067/1‑94 (MQ=60)
                                                                               CTACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCG                >  SRR4302542.1600636/1‑94 (MQ=60)
                                                                                TACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGC               >  SRR4302542.2826389/1‑94 (MQ=60)
                                                                                 ACCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCC              >  SRR4302542.6823584/1‑94 (MQ=60)
                                                                                  CCGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCA             >  SRR4302542.1105950/1‑94 (MQ=60)
                                                                                   CGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAG            <  SRR4302542.4070881/94‑1 (MQ=60)
                                                                                   CGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAG            <  SRR4302542.4085553/94‑1 (MQ=60)
                                                                                   CGCTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAG            <  SRR4302542.6153609/94‑1 (MQ=60)
                                                                                    GCTGCACACAGTGCGGGCGCGGGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAG            >  SRR4302542.2364639/1‑94 (MQ=60)
                                                                                     CTGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAGCG          >  SRR4302542.5511900/1‑94 (MQ=60)
                                                                                      TGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAGCGG         <  SRR4302542.5950870/94‑1 (MQ=60)
                                                                                      TGCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAGCGG         <  SRR4302542.6224011/94‑1 (MQ=60)
                                                                                       GCACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAGCGGC        >  SRR4302542.5150181/1‑94 (MQ=60)
                                                                                         ACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAGCGGCGC      >  SRR4302542.28827/1‑94 (MQ=60)
                                                                                         ACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAGCGGCGC      >  SRR4302542.89103/1‑94 (MQ=60)
                                                                                         ACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAGCGGCGC      >  SRR4302542.5233254/1‑94 (MQ=60)
                                                                                         ACACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAGCGGCGC      >  SRR4302542.4812183/1‑94 (MQ=60)
                                                                                          CACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAGCGGCGCA     >  SRR4302542.5677860/1‑94 (MQ=60)
                                                                                           ACAGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAGCGGCGCAT    >  SRR4302542.6728107/1‑94 (MQ=60)
                                                                                             AGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAGCGGCGCATCG  <  SRR4302542.1947450/94‑1 (MQ=60)
                                                                                             AGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAGCGGCGCATCG  <  SRR4302542.6356420/94‑1 (MQ=60)
                                                                                             AGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAGCGGCGCATCG  <  SRR4302542.2622337/94‑1 (MQ=60)
                                                                                             AGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAGCGGCGCATCG  <  SRR4302542.6585122/94‑1 (MQ=60)
                                                                                             AGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAGCGGCGCATCG  >  SRR4302542.3684256/1‑94 (MQ=60)
                                                                                             |                                                                                              
GTCAACGCCTTTGGCTGCGGGAAGATTACCCAGCGCATTGAGATCTAAAGAAGAGATCGGCGTCAGAATGCCGCCTGCACTACCGCTGCACACGGTGCGGGCGC‑GGATAATTTGCGGATTCAGATTGGTCAGTGAAACCGGCAGTGGTTCCAGTTCGTCAGATTTAACTTCCGCCAGCGGCGCATCG  >  NC_000913/4139343‑4139529

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑