Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,145,321 |
T→C |
A192A (GCA→GCG) |
yijO ← |
putative ARAC‑type regulatory protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,145,321 | 0 | T | C | 84.0%
| 625.0
/ 117.0
| 281 | A192A (GCA→GCG) | yijO | putative ARAC‑type regulatory protein |
| Reads supporting (aligned to +/- strand): ref base T (25/20); new base C (119/117); total (144/137) |
| Fisher's exact test for biased strand distribution p-value = 6.26e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.54e-01 |
Only 100 of 287 total aligned reads displayed.
GTCGCGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCT > NC_000913/4145230‑4145412
|
gTCGCGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCtgtg > 2:1095162/1‑93 (MQ=255)
cgcgTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCa < 2:6725197/93‑1 (MQ=255)
tgtgATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAg > 1:1853917/1‑93 (MQ=255)
tgtgATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAg > 2:2195772/1‑93 (MQ=255)
tgtgATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAg > 1:2206479/1‑93 (MQ=255)
gtgATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGa < 1:531577/93‑1 (MQ=255)
gtgATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGa < 1:1565991/93‑1 (MQ=255)
tgATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGAt < 2:12197/93‑1 (MQ=255)
gATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGAtt < 2:3523952/93‑1 (MQ=255)
aTTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTc < 1:4037351/93‑1 (MQ=255)
aTTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTc > 2:7425790/1‑93 (MQ=255)
aTTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTc > 1:446763/1‑93 (MQ=255)
aTTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTc > 2:2425911/1‑93 (MQ=255)
cAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTcgcg > 1:5034160/1‑93 (MQ=255)
cAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTcgcg < 2:5176687/93‑1 (MQ=255)
cAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTcgcg < 2:5561552/93‑1 (MQ=255)
cAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTcgcg < 1:228143/93‑1 (MQ=255)
cAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTcgcg < 2:4377744/93‑1 (MQ=255)
ggTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCggg > 1:3975634/1‑93 (MQ=255)
tATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTa < 1:4620129/93‑1 (MQ=255)
aTTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTaa < 1:7433067/93‑1 (MQ=255)
ttCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAg > 1:3784614/1‑93 (MQ=255)
gTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAgcgc > 2:2961727/1‑93 (MQ=255)
gTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAgcgc > 1:4382157/1‑93 (MQ=255)
aaaCCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAg > 1:4862351/1‑93 (MQ=255)
aTGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAg < 2:4529628/93‑1 (MQ=255)
ggCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCg < 1:2040687/93‑1 (MQ=255)
ccccGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTtc < 1:5992095/93‑1 (MQ=255)
ccccGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTtc < 2:1848186/93‑1 (MQ=255)
cccGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTtcg > 2:1034186/1‑93 (MQ=255)
cccGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTtcg > 2:4156333/1‑93 (MQ=255)
cccGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTtcg > 1:6390138/1‑93 (MQ=255)
ccGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTtcgt > 1:4286921/1‑93 (MQ=255)
ccGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTtcgt < 1:3119858/93‑1 (MQ=255)
ccGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTtcgt < 1:5708283/93‑1 (MQ=255)
gTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTtcgtcg < 2:1884042/93‑1 (MQ=255)
ttttttGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGa < 1:1914204/93‑1 (MQ=255)
ttttttGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGa < 1:3254792/93‑1 (MQ=255)
tttGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGatat < 2:5751637/93‑1 (MQ=255)
tGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATaa < 2:5040508/93‑1 (MQ=255)
tGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATaa < 2:7113054/93‑1 (MQ=255)
gAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAAt < 1:4169322/93‑1 (MQ=255)
aaaCAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATc < 1:1108707/93‑1 (MQ=255)
aaaCAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATc < 2:7312800/93‑1 (MQ=255)
aaaCAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATc > 2:2788801/1‑93 (MQ=255)
aaCAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATcg > 1:2638425/1‑93 (MQ=255)
ggTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGaa < 1:2724150/93‑1 (MQ=255)
ggTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGaa < 1:2674836/93‑1 (MQ=255)
tGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATa < 1:4767263/93‑1 (MQ=255)
tGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATa < 1:6808238/93‑1 (MQ=255)
tGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATa < 1:6526800/93‑1 (MQ=255)
cGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGc < 2:3702961/93‑1 (MQ=255)
cGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGc < 2:4910455/93‑1 (MQ=255)
gagaGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCt < 2:6363014/93‑1 (MQ=255)
agagGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCtt < 2:4025353/93‑1 (MQ=255)
gagGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTc > 2:5324514/1‑93 (MQ=255)
gagGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTc > 2:4697781/1‑93 (MQ=255)
agGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCa > 1:5162478/1‑93 (MQ=255)
agGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCa < 2:3654506/93‑1 (MQ=255)
ggTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCaa > 1:1038617/1‑93 (MQ=255)
ggTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCaa > 2:3114240/1‑93 (MQ=255)
gTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCaaa > 2:1569349/1‑93 (MQ=255)
gTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCaaa > 2:4797140/1‑93 (MQ=255)
gTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCaaa < 1:149753/93‑1 (MQ=255)
tAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAAt < 2:1589145/93‑1 (MQ=255)
aaTTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATa > 1:6205974/1‑93 (MQ=255)
aaTTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATa < 1:2760205/93‑1 (MQ=255)
aTTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAg < 2:54223/93‑1 (MQ=255)
aTTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGTATAGCTTCAAATAg < 2:6449099/93‑1 (MQ=255)
aTTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAg < 2:2686812/93‑1 (MQ=255)
tttGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGt < 2:6880372/93‑1 (MQ=255)
tttGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGt > 1:6995900/1‑93 (MQ=255)
ttGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTg > 2:6944514/1‑93 (MQ=255)
gCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCt < 1:2374255/93‑1 (MQ=255)
cGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTg < 2:5738823/93‑1 (MQ=255)
cGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTg < 1:5914457/93‑1 (MQ=255)
gAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTgg > 1:5248628/1‑93 (MQ=255)
aaaTATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGc > 2:6430336/1‑93 (MQ=255)
aaaTATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGc < 2:3335308/93‑1 (MQ=255)
aaaTATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGc < 2:5958558/93‑1 (MQ=255)
aaaTATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGc < 2:4781986/93‑1 (MQ=255)
aaTATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCt > 2:3806722/1‑93 (MQ=255)
aaTATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCt < 1:1402628/93‑1 (MQ=255)
atatAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTg > 2:1946105/1‑93 (MQ=255)
tataAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGc > 1:7497037/1‑93 (MQ=255)
taAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGt > 2:6172133/1‑93 (MQ=255)
taAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGt > 1:7333297/1‑93 (MQ=255)
aaaaCGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCggg > 1:1210116/1‑91 (MQ=255)
aaaaCGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTg < 1:1145012/93‑1 (MQ=255)
aaaaCGCCTGCGCAACAGATTCGCGGGTAAGCGCGGCGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTg > 2:1622865/1‑93 (MQ=255)
aaaaCGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTg > 1:2967365/1‑93 (MQ=255)
aaaCGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGa > 1:3598896/1‑93 (MQ=255)
aaaCGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGa < 2:822903/93‑1 (MQ=255)
aaCGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAg > 1:3982712/1‑93 (MQ=255)
aCGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAgg < 2:680302/93‑1 (MQ=255)
gCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCg > 2:317848/1‑93 (MQ=255)
gCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCg < 2:1504485/93‑1 (MQ=255)
cTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGt < 1:7069983/93‑1 (MQ=255)
tgtgCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTc < 1:4303814/93‑1 (MQ=255)
gtgCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCt < 2:972295/93‑1 (MQ=255)
|
GTCGCGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCT > NC_000913/4145230‑4145412
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCTGG > NC_000913/4145232‑4145414
|
CGCGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAA > SRR4302542.825635/1‑94 (MQ=60)
GCGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAAC > SRR4302542.5700940/1‑94 (MQ=60)
CGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACA > SRR4302542.1271290/1‑94 (MQ=60)
CGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACA > SRR4302542.4035751/1‑94 (MQ=60)
GTTTGATTCAGTTATTCGTTAAACCAAATGCCCCCCTTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAG < SRR4302542.4747460/94‑1 (MQ=60)
GTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAG > SRR4302542.7543666/1‑94 (MQ=60)
GTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAG > SRR4302542.155006/1‑94 (MQ=60)
GTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAG < SRR4302542.6124100/94‑1 (MQ=60)
GTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAG > SRR4302542.1869947/1‑94 (MQ=60)
GTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAG > SRR4302542.2225462/1‑94 (MQ=60)
GTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAG > SRR4302542.1440660/1‑94 (MQ=60)
GTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGAT < SRR4302542.4464031/94‑1 (MQ=60)
GTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGAT < SRR4302542.1579516/94‑1 (MQ=60)
GTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGAT < SRR4302542.4197376/94‑1 (MQ=60)
GTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGAT < SRR4302542.7290137/94‑1 (MQ=60)
GTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGAT < SRR4302542.536168/94‑1 (MQ=60)
TGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATT < SRR4302542.1415584/94‑1 (MQ=60)
GATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTC > SRR4302542.450627/1‑94 (MQ=60)
GATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTC < SRR4302542.655358/94‑1 (MQ=60)
ATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCG < SRR4302542.4077190/94‑1 (MQ=60)
ATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCG < SRR4302542.4415212/94‑1 (MQ=60)
ATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCG > SRR4302542.7076831/1‑94 (MQ=60)
TCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCG > SRR4302542.5083028/1‑94 (MQ=60)
TCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCG < SRR4302542.5976096/94‑1 (MQ=60)
CAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGG < SRR4302542.2705931/94‑1 (MQ=60)
CAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGG > SRR4302542.4906729/1‑94 (MQ=60)
CAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGG < SRR4302542.230104/94‑1 (MQ=60)
AGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGG > SRR4302542.4014861/1‑94 (MQ=60)
GTATTCGTTAAAACCAAAGCCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTA > SRR4302542.3141546/1‑94 (MQ=60)
TATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAA < SRR4302542.4665266/94‑1 (MQ=60)
TATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAA < SRR4302542.2240216/94‑1 (MQ=60)
ATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAG < SRR4302542.7505810/94‑1 (MQ=60)
ATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAG > SRR4302542.4929615/1‑94 (MQ=60)
ATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAG > SRR4302542.3822050/1‑94 (MQ=60)
TTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGC < SRR4302542.4477915/94‑1 (MQ=60)
TTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGC < SRR4302542.6958292/94‑1 (MQ=60)
TCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCG < SRR4302542.585594/94‑1 (MQ=60)
CGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGC < SRR4302542.4878667/94‑1 (MQ=60)
CGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGC > SRR4302542.4425157/1‑94 (MQ=60)
GTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCG < SRR4302542.5344607/94‑1 (MQ=60)
AAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAG > SRR4302542.4909703/1‑94 (MQ=60)
AAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAG < SRR4302542.197603/94‑1 (MQ=60)
AACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGC < SRR4302542.681241/94‑1 (MQ=60)
AACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGC < SRR4302542.5087434/94‑1 (MQ=60)
AACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGC < SRR4302542.7010286/94‑1 (MQ=60)
ACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCA < SRR4302542.7565086/94‑1 (MQ=60)
ACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCA > SRR4302542.6382388/1‑94 (MQ=60)
CCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCAT > SRR4302542.3856846/1‑94 (MQ=60)
CCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCAT > SRR4302542.441639/1‑94 (MQ=60)
CAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATA > SRR4302542.6866403/1‑94 (MQ=60)
CAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATA < SRR4302542.7115580/94‑1 (MQ=60)
ATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGC > SRR4302542.2228830/1‑94 (MQ=60)
ATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGC > SRR4302542.4016639/1‑94 (MQ=60)
TGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCG < SRR4302542.1131193/94‑1 (MQ=60)
GGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGT < SRR4302542.2058333/94‑1 (MQ=60)
CCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTC > SRR4302542.5158982/1‑94 (MQ=60)
CCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCG < SRR4302542.6050134/94‑1 (MQ=60)
CCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCG > SRR4302542.6453093/1‑94 (MQ=60)
CCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGT > SRR4302542.4329084/1‑94 (MQ=60)
CCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGT > SRR4302542.3884186/1‑94 (MQ=60)
CCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGT > SRR4302542.744693/1‑94 (MQ=60)
CCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTC < SRR4302542.4267111/94‑1 (MQ=60)
CCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTC < SRR4302542.3149535/94‑1 (MQ=60)
CCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTC < SRR4302542.5763696/94‑1 (MQ=60)
CCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTC > SRR4302542.5342711/1‑94 (MQ=60)
CGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCG > SRR4302542.124898/1‑94 (MQ=60)
CGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCG > SRR4302542.3088264/1‑94 (MQ=60)
GTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGA < SRR4302542.2414059/94‑1 (MQ=60)
TTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGAT < SRR4302542.1930746/94‑1 (MQ=60)
TTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGAT < SRR4302542.3285529/94‑1 (MQ=60)
TTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATA > SRR4302542.1658458/1‑94 (MQ=60)
TTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATA > SRR4302542.2774548/1‑94 (MQ=60)
TGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAAT > SRR4302542.3306960/1‑94 (MQ=60)
GAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATC < SRR4302542.4210445/94‑1 (MQ=60)
AAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCG < SRR4302542.1118188/94‑1 (MQ=60)
AAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCG > SRR4302542.2707004/1‑94 (MQ=60)
AAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCG > SRR4302542.152007/1‑94 (MQ=60)
AAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCG > SRR4302542.2663908/1‑94 (MQ=60)
AAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCG < SRR4302542.2677097/94‑1 (MQ=60)
AAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCG < SRR4302542.4337079/94‑1 (MQ=60)
AGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAA > SRR4302542.4018949/1‑94 (MQ=60)
AGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAA < SRR4302542.3696259/94‑1 (MQ=60)
GGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAAT < SRR4302542.2750432/94‑1 (MQ=60)
GGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAAT < SRR4302542.2700654/94‑1 (MQ=60)
GGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAAT < SRR4302542.189005/94‑1 (MQ=60)
GTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATA < SRR4302542.1164735/94‑1 (MQ=60)
GTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATA > SRR4302542.2343934/1‑94 (MQ=60)
TGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAG < SRR4302542.164345/94‑1 (MQ=60)
TGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAG > SRR4302542.2830195/1‑94 (MQ=60)
TGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAG < SRR4302542.6875172/94‑1 (MQ=60)
TGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAG < SRR4302542.5034180/94‑1 (MQ=60)
TGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAG < SRR4302542.6591120/94‑1 (MQ=60)
TGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAG < SRR4302542.4813733/94‑1 (MQ=60)
GCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGATAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGC > SRR4302542.4338840/1‑94 (MQ=60)
GAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTT > SRR4302542.2688950/1‑94 (MQ=60)
GAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCA > SRR4302542.5212649/1‑94 (MQ=60)
GAGGAAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCA > SRR4302542.5217282/1‑94 (MQ=60)
AGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAA > SRR4302542.1047539/1‑94 (MQ=60)
AGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAA > SRR4302542.3271060/1‑94 (MQ=60)
GGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAA < SRR4302542.6527480/94‑1 (MQ=60)
GGTAATTTGGCGAAATATAAAACGCC‑GGGCCACAGATTCGCGGGTAAGCGCGGGGGCATAGCGGTCGTCGATATAATTGCGAATAGgtttcaaa > SRR4302542.2869843/1‑86 (MQ=60)
GTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAAT < SRR4302542.315893/94‑1 (MQ=60)
GTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAAT < SRR4302542.151018/94‑1 (MQ=60)
GTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTAGTCGATATAATCGCGAATAGCTTCAAAT < SRR4302542.2603152/94‑1 (MQ=60)
TAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATA > SRR4302542.2187784/1‑94 (MQ=60)
TAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATA > SRR4302542.6266974/1‑94 (MQ=60)
AATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAG > SRR4302542.418786/1‑94 (MQ=60)
AATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAG < SRR4302542.3440693/94‑1 (MQ=60)
AATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAG < SRR4302542.2786800/94‑1 (MQ=60)
ATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGT > SRR4302542.2132597/1‑94 (MQ=60)
ATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGT > SRR4302542.7064635/1‑94 (MQ=60)
TTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTG < SRR4302542.4546833/94‑1 (MQ=60)
TGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCC > SRR4302542.4614016/1‑94 (MQ=60)
GGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCT < SRR4302542.7317890/94‑1 (MQ=60)
GGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCT > SRR4302542.5701947/1‑94 (MQ=60)
GCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTG < SRR4302542.1142689/94‑1 (MQ=60)
GCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTG < SRR4302542.2395347/94‑1 (MQ=60)
CGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGG > SRR4302542.5832278/1‑94 (MQ=60)
CGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGG > SRR4302542.5299648/1‑94 (MQ=60)
CGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGG < SRR4302542.5263114/94‑1 (MQ=60)
CGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGG < SRR4302542.5971773/94‑1 (MQ=60)
CGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGG > SRR4302542.430717/1‑94 (MQ=60)
GAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGC > SRR4302542.2053336/1‑94 (MQ=60)
AAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCT > SRR4302542.1155828/1‑94 (MQ=60)
AATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTG < SRR4302542.1414754/94‑1 (MQ=60)
ATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGC > SRR4302542.7570708/1‑94 (MQ=60)
ATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGC > SRR4302542.6301152/1‑94 (MQ=60)
TATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCG > SRR4302542.2317406/1‑94 (MQ=60)
ATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGT > SRR4302542.7405139/1‑94 (MQ=60)
TAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGGG > SRR4302542.1220509/1‑94 (MQ=60)
TAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTG > SRR4302542.2995800/1‑94 (MQ=60)
AAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGA < SRR4302542.1154824/94‑1 (MQ=60)
AAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGA > SRR4302542.3632446/1‑94 (MQ=60)
AAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAG > SRR4302542.4021997/1‑94 (MQ=60)
AACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGG < SRR4302542.6123897/94‑1 (MQ=60)
AACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGG < SRR4302542.2836597/94‑1 (MQ=60)
AACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGG > SRR4302542.3674754/1‑94 (MQ=60)
CTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTC < SRR4302542.7139373/94‑1 (MQ=60)
TGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCT > SRR4302542.1086161/1‑94 (MQ=60)
TGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCT < SRR4302542.4346124/94‑1 (MQ=60)
TGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCT < SRR4302542.1281206/94‑1 (MQ=60)
GCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCTG < SRR4302542.2851248/94‑1 (MQ=60)
CGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCTGG < SRR4302542.744645/94‑1 (MQ=60)
CGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCTGG > SRR4302542.6738440/1‑94 (MQ=60)
CGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCTGG > SRR4302542.3884864/1‑94 (MQ=60)
CGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCTGG > SRR4302542.1502388/1‑94 (MQ=60)
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CGCGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCTGG > NC_000913/4145232‑4145414
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
