Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,155,035 |
A→G |
T203A (ACG→GCG) |
argH → |
argininosuccinate lyase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,155,035 | 0 | A | G | 84.7%
| 579.0
/ 93.7
| 262 | T203A (ACG→GCG) | argH | argininosuccinate lyase |
| Reads supporting (aligned to +/- strand): ref base A (14/26); new base G (106/116); total (120/142) |
| Fisher's exact test for biased strand distribution p-value = 1.68e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.21e-01 |
Only 100 of 264 total aligned reads displayed.
ATGTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGT > NC_000913/4154943‑4155124
|
aTGTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGaa < 1:4826641/93‑1 (MQ=255)
tGTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAAc < 1:6582607/93‑1 (MQ=255)
gTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCg < 2:4431639/93‑1 (MQ=255)
gTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCg > 2:7432408/1‑93 (MQ=255)
ttGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCgg < 1:1430269/93‑1 (MQ=255)
gagaTGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGcc < 2:7305164/93‑1 (MQ=255)
agaTGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCt < 2:5787097/93‑1 (MQ=255)
aTGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTAt < 2:6567859/93‑1 (MQ=255)
tGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATg < 1:6817295/93‑1 (MQ=255)
tGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATg > 2:2495873/1‑93 (MQ=255)
gCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGa < 1:4898647/93‑1 (MQ=255)
cTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGaa < 1:6022140/93‑1 (MQ=255)
ggCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAAt < 1:5083594/93‑1 (MQ=255)
ggCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAACGGCCTATGAAAt > 1:2512592/1‑93 (MQ=255)
cgcgTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAACGGCCTATGAAATCg < 1:4289628/93‑1 (MQ=255)
gTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGAcc > 1:3860186/1‑93 (MQ=255)
tgatgaAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCg > 2:5215465/1‑93 (MQ=255)
gatgaAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGt > 1:1758678/1‑93 (MQ=255)
atgaAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTTGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTg < 1:3033654/93‑1 (MQ=255)
atgaAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTg > 2:1515098/1‑93 (MQ=255)
tgaAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAACGGCCTATGAAATCGACCGTGa > 1:1824031/1‑93 (MQ=255)
gaAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGaa > 1:1535066/1‑93 (MQ=255)
aaGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACa < 1:3835407/93‑1 (MQ=255)
aaGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAACGGCCTATGAAATCGACCGTGAACa < 1:4741977/93‑1 (MQ=255)
aGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAg > 1:2657232/1‑93 (MQ=255)
gCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGt < 1:3092915/93‑1 (MQ=255)
gCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGt < 1:5730875/93‑1 (MQ=255)
gCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGt < 2:3812233/93‑1 (MQ=255)
gCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGt < 2:4754909/93‑1 (MQ=255)
gCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGt < 1:1692128/93‑1 (MQ=255)
gCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGt < 1:629580/93‑1 (MQ=255)
ccGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGtt < 1:7337709/93‑1 (MQ=255)
gTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAg > 2:896219/1‑93 (MQ=255)
gTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAg > 2:4965830/1‑93 (MQ=255)
ttGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCa < 1:393644/93‑1 (MQ=255)
ttGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCa < 1:3219799/93‑1 (MQ=255)
tGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAg > 2:6349152/1‑93 (MQ=255)
aGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAggct < 2:3013751/93‑1 (MQ=255)
aGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAggct < 2:6480553/93‑1 (MQ=255)
ggATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAggctg > 1:511757/1‑93 (MQ=255)
ggATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAggctg > 2:6149579/1‑93 (MQ=255)
gcgcTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGgctggctg < 1:4965675/93‑1 (MQ=255)
cgcTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGctggctgg < 1:1170172/93‑1 (MQ=255)
gcTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTggg > 1:5968894/1‑93 (MQ=255)
cTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGc > 1:3586177/1‑93 (MQ=255)
cTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGc > 2:6948445/1‑93 (MQ=255)
ttAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCt < 1:7278923/93‑1 (MQ=255)
tAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCtt < 1:6117441/93‑1 (MQ=255)
tAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCtt > 2:4237941/1‑93 (MQ=255)
aGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTg > 2:836043/1‑93 (MQ=255)
aGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTg < 2:4213350/93‑1 (MQ=255)
aGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTg < 2:1292277/93‑1 (MQ=255)
gCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGc > 2:3495658/1‑93 (MQ=255)
cGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCt < 2:4035679/93‑1 (MQ=255)
tCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTc < 1:4881997/93‑1 (MQ=255)
tCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTc < 2:2786707/93‑1 (MQ=255)
tCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTc < 2:6059569/93‑1 (MQ=255)
cTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCg < 1:4420054/93‑1 (MQ=255)
cTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCg > 1:237776/1‑93 (MQ=255)
tGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCgg > 2:4708256/1‑93 (MQ=255)
ggATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGc < 2:6004163/93‑1 (MQ=255)
ggATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGc > 1:845204/1‑93 (MQ=255)
gATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCg > 2:3376318/1‑93 (MQ=255)
aTGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGa < 2:5434130/93‑1 (MQ=255)
gTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGAcc < 2:2295738/93‑1 (MQ=255)
gTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGAcc > 1:2870747/1‑93 (MQ=255)
gTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCGTTGCTTCGGCGAcc < 2:6435919/93‑1 (MQ=255)
tCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGAccc > 1:4542115/1‑93 (MQ=255)
aGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGt > 1:6747421/1‑93 (MQ=255)
gCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTa > 1:1331426/1‑93 (MQ=255)
cccGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTaa > 1:2796487/1‑93 (MQ=255)
ccGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAAc < 1:765032/93‑1 (MQ=255)
ccGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAAc < 2:2387310/93‑1 (MQ=255)
cGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACa < 2:3572454/93‑1 (MQ=255)
gCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAg > 2:5517096/1‑93 (MQ=255)
gCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAg < 2:5421175/93‑1 (MQ=255)
gCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAg > 2:5304928/1‑93 (MQ=255)
cTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGt > 2:2909487/1‑93 (MQ=255)
tAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGtc > 2:1940131/1‑93 (MQ=255)
aGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGtct > 1:101505/1‑93 (MQ=255)
ggCTGTGGCGCGCTGGCGGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGtctc < 1:6869696/93‑1 (MQ=255)
cTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGa < 1:5981527/93‑1 (MQ=255)
cTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGa < 2:1607322/93‑1 (MQ=255)
tgtgGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGAc > 2:3852087/1‑93 (MQ=255)
tgtgGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGAc < 2:6763332/93‑1 (MQ=255)
gtgGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACa < 2:5329064/93‑1 (MQ=255)
gtgGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACa < 2:2719822/93‑1 (MQ=255)
tgGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGCCAg > 1:2096835/1‑93 (MQ=255)
ggCGCGCTGGCGGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGc < 2:1385174/93‑1 (MQ=255)
gcgcTGGCGGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGtt < 2:6987550/93‑1 (MQ=255)
cgcTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCCGAACAGTCTCGACAGCGttt > 1:7050479/1‑93 (MQ=255)
gcTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTc > 1:5816304/1‑93 (MQ=255)
gcTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTc < 1:2158142/93‑1 (MQ=255)
gcTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTc < 2:4987083/93‑1 (MQ=255)
gcTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTc < 2:2627030/93‑1 (MQ=255)
cTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCt > 1:5318010/1‑93 (MQ=255)
gCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGAc < 1:5905447/93‑1 (MQ=255)
gggAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCg < 1:5603129/93‑1 (MQ=255)
gggAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCg < 2:1111642/93‑1 (MQ=255)
ggAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGt > 1:5888451/1‑93 (MQ=255)
|
ATGTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGT > NC_000913/4154943‑4155124
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TATGTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGTGAC > NC_000913/4154942‑4155127
|
TATGTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAG < SRR4302542.5498516/94‑1 (MQ=60)
ATGTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGC > SRR4302542.3321178/1‑94 (MQ=60)
ATGTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGC > SRR4302542.22101/1‑94 (MQ=60)
ATGTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGC < SRR4302542.7241424/94‑1 (MQ=60)
ATGTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGC < SRR4302542.4857698/94‑1 (MQ=60)
ATGTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGC > SRR4302542.1798256/1‑94 (MQ=60)
ATGTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAAC < SRR4302542.4873675/94‑1 (MQ=60)
TGTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAACG < SRR4302542.6647464/94‑1 (MQ=60)
GTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTCGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAACGG < SRR4302542.7577718/94‑1 (MQ=60)
TTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGC < SRR4302542.1442639/94‑1 (MQ=60)
ATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATG > SRR4302542.1562315/1‑94 (MQ=60)
TGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGA > SRR4302542.3438512/1‑94 (MQ=60)
TGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGA < SRR4302542.6884310/94‑1 (MQ=60)
TGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGA < SRR4302542.3070921/94‑1 (MQ=60)
TGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGA > SRR4302542.4927508/1‑94 (MQ=60)
TGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGA < SRR4302542.5291130/94‑1 (MQ=60)
GCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAA < SRR4302542.1786383/94‑1 (MQ=60)
GCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAA < SRR4302542.4946263/94‑1 (MQ=60)
CTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAA < SRR4302542.6080458/94‑1 (MQ=60)
CTGGCGCGTGATGAAAGCCGTCTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGGAACGGCCTATGAA > SRR4302542.6274362/1‑94 (MQ=60)
TGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAACGGCCTATGAAAT > SRR4302542.2536963/1‑94 (MQ=60)
GGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATC < SRR4302542.2007852/94‑1 (MQ=60)
GGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATC < SRR4302542.5132994/94‑1 (MQ=60)
GGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAACGGCCTATGAAATC < SRR4302542.4060781/94‑1 (MQ=60)
CGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGA > SRR4302542.1910757/1‑94 (MQ=60)
CGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGA > SRR4302542.4461182/1‑94 (MQ=60)
CGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGA > SRR4302542.6956212/1‑94 (MQ=60)
CGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGA > SRR4302542.4171258/1‑94 (MQ=60)
CGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAACGGCCTATGAAATCGA > SRR4302542.4770370/1‑94 (MQ=60)
CGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAACGGCCTATGAAATCGA < SRR4302542.4331814/94‑1 (MQ=60)
CGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACC > SRR4302542.3898310/1‑94 (MQ=60)
TGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGT > SRR4302542.1773939/1‑94 (MQ=60)
GATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGGGGGGCCTATGAAATCGACCGTG > SRR4302542.6380977/1‑94 (MQ=60)
ATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTTGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGA < SRR4302542.3062598/94‑1 (MQ=60)
ATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGA > SRR4302542.5985685/1‑94 (MQ=60)
ATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGA > SRR4302542.4962677/1‑94 (MQ=60)
ATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGA > SRR4302542.3921675/1‑94 (MQ=60)
ATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAACGGCCTATGAAATCGACCGTGA > SRR4302542.1839823/1‑94 (MQ=60)
TGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAA < SRR4302542.5459848/94‑1 (MQ=60)
TGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAA > SRR4302542.1548323/1‑94 (MQ=60)
AAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAG < SRR4302542.3873338/94‑1 (MQ=60)
AAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAG > SRR4302542.2682882/1‑94 (MQ=60)
AAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAG < SRR4302542.4485701/94‑1 (MQ=60)
AAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAG < SRR4302542.1799561/94‑1 (MQ=60)
AAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAACGGCCTATGAAATCGACCGTGAACAG < SRR4302542.4788211/94‑1 (MQ=60)
AGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGT > SRR4302542.1210506/1‑94 (MQ=60)
GCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTT < SRR4302542.4884779/94‑1 (MQ=60)
GCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTT < SRR4302542.3122332/94‑1 (MQ=60)
GCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTT < SRR4302542.1706780/94‑1 (MQ=60)
GCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTT < SRR4302542.5786491/94‑1 (MQ=60)
GCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTT < SRR4302542.635002/94‑1 (MQ=60)
CCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTA > SRR4302542.834821/1‑94 (MQ=60)
CCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTA < SRR4302542.7409583/94‑1 (MQ=60)
CGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAG > SRR4302542.6075638/1‑94 (MQ=60)
GTTTGCAGGATGCGTTTAAGCGTCTGGATGTCAGCCCGCTGGGCTGGGGCGCGCGGGC‑GGGAGGGGCCTATAAAACCGACCGTGAAAATTTAGC < SRR4302542.3692407/94‑1 (MQ=46)
TTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCA < SRR4302542.2865390/94‑1 (MQ=60)
TTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAG < SRR4302542.3250269/94‑1 (MQ=60)
TTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAG < SRR4302542.397048/94‑1 (MQ=60)
TTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAG < SRR4302542.692215/94‑1 (MQ=60)
TTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAG < SRR4302542.692216/94‑1 (MQ=60)
TGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGG < SRR4302542.5862676/94‑1 (MQ=60)
TGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGAGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGG > SRR4302542.483781/1‑94 (MQ=60)
CAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCT > SRR4302542.1272347/1‑94 (MQ=60)
CAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCT > SRR4302542.7528505/1‑94 (MQ=60)
CAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCT < SRR4302542.1758613/94‑1 (MQ=60)
AGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTG < SRR4302542.3748237/94‑1 (MQ=60)
AGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTG > SRR4302542.516200/1‑94 (MQ=60)
AGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTG < SRR4302542.244772/94‑1 (MQ=60)
GGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGG > SRR4302542.5527026/1‑94 (MQ=60)
GGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGG > SRR4302542.3511659/1‑94 (MQ=60)
GGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGG > SRR4302542.6039342/1‑94 (MQ=60)
GGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGG > SRR4302542.2589743/1‑94 (MQ=60)
GATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGC > SRR4302542.2121136/1‑94 (MQ=60)
GATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGC < SRR4302542.515240/94‑1 (MQ=60)
ATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCT < SRR4302542.4535167/94‑1 (MQ=60)
GCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGG < SRR4302542.2476365/94‑1 (MQ=60)
GCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGG < SRR4302542.5013894/94‑1 (MQ=60)
CGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGG > SRR4302542.6026672/1‑94 (MQ=60)
CGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGG > SRR4302542.3079534/1‑94 (MQ=60)
CGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGG < SRR4302542.1180288/94‑1 (MQ=60)
GCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGC > SRR4302542.3619629/1‑94 (MQ=60)
GCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGC > SRR4302542.6572631/1‑94 (MQ=60)
TTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTT < SRR4302542.7350310/94‑1 (MQ=60)
TAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTT < SRR4302542.6058437/94‑1 (MQ=60)
TAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTT < SRR4302542.7353/94‑1 (MQ=60)
TAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTT < SRR4302542.711368/94‑1 (MQ=60)
TAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTT < SRR4302542.6176635/94‑1 (MQ=60)
AAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTG > SRR4302542.1681655/1‑94 (MQ=60)
AAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTG < SRR4302542.5809622/94‑1 (MQ=60)
AGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTNN > SRR4302542.1467168/1‑94 (MQ=60)
GTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTC > SRR4302542.1427758/1‑94 (MQ=60)
TCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCG < SRR4302542.4929503/94‑1 (MQ=60)
TCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCG < SRR4302542.5337559/94‑1 (MQ=60)
TCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCG < SRR4302542.4929502/94‑1 (MQ=60)
TCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCG > SRR4302542.239820/1‑94 (MQ=60)
CTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGG > SRR4302542.6080633/1‑94 (MQ=60)
CTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGG < SRR4302542.500739/94‑1 (MQ=60)
CTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGG < SRR4302542.4463466/94‑1 (MQ=60)
TGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGC > SRR4302542.852493/1‑94 (MQ=60)
TGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGC < SRR4302542.3173903/94‑1 (MQ=60)
GGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCG > SRR4302542.1397371/1‑94 (MQ=60)
ATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGAC > SRR4302542.6151912/1‑94 (MQ=60)
ATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGAC < SRR4302542.7074071/94‑1 (MQ=60)
TGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACC > SRR4302542.2898327/1‑94 (MQ=60)
GTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCC > SRR4302542.4586580/1‑94 (MQ=60)
GTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCC < SRR4302542.3890171/94‑1 (MQ=60)
CAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGT > SRR4302542.6813815/1‑94 (MQ=60)
AGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTA > SRR4302542.1342892/1‑94 (MQ=60)
GCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAA > SRR4302542.2823393/1‑94 (MQ=60)
CCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACA > SRR4302542.2958631/1‑94 (MQ=60)
CCGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACA < SRR4302542.771654/94‑1 (MQ=60)
CGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAG < SRR4302542.575930/94‑1 (MQ=60)
CGCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAG < SRR4302542.2214541/94‑1 (MQ=60)
CGCTAGGCTGTGGCGCGCTGGC‑GGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAG < SRR4302542.2766767/94‑1 (MQ=60)
GCTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGT > SRR4302542.2207591/1‑94 (MQ=60)
CTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTTCTTCGGggggcccgcaacaga > SRR4302542.7600616/1‑79 (MQ=60)
CTAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTC > SRR4302542.5066183/1‑94 (MQ=60)
TAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCT > SRR4302542.102353/1‑94 (MQ=60)
TAGGCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCT > SRR4302542.5925997/1‑94 (MQ=60)
GGCTGTGGCGCGCTGGC‑GGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCG < SRR4302542.6937177/94‑1 (MQ=60)
GCTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGA > SRR4302542.6680785/1‑94 (MQ=60)
GCTGTGGCGCGCTGGC‑GGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGA > SRR4302542.6826909/1‑94 (MQ=60)
CTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGAC < SRR4302542.3940584/94‑1 (MQ=60)
CTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGAC < SRR4302542.6039469/94‑1 (MQ=60)
CTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGAC > SRR4302542.2729646/1‑94 (MQ=60)
CTGTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGAC < SRR4302542.1068138/94‑1 (MQ=60)
GTGGCGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGCCAG > SRR4302542.2114917/1‑94 (MQ=60)
TGGCGCGCTGGC‑GGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGC < SRR4302542.4707062/94‑1 (MQ=60)
CGCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTT < SRR4302542.303486/94‑1 (MQ=60)
CGCGCTGGC‑GGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTT < SRR4302542.669248/94‑1 (MQ=60)
GCGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCCGAACAGTCTCGACAGCGTTT > SRR4302542.7119696/1‑94 (MQ=60)
CGCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTC > SRR4302542.5872776/1‑94 (MQ=60)
GCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCT < SRR4302542.5883383/94‑1 (MQ=60)
GCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCT < SRR4302542.5981239/94‑1 (MQ=60)
GCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCT < SRR4302542.2176725/94‑1 (MQ=60)
GCTGGC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCT > SRR4302542.5369671/1‑94 (MQ=60)
GC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACC > SRR4302542.153960/1‑94 (MQ=60)
GC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACC < SRR4302542.5962678/94‑1 (MQ=60)
GC‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACC < SRR4302542.5962674/94‑1 (MQ=60)
C‑GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCG < SRR4302542.7358310/94‑1 (MQ=60)
GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGT < SRR4302542.5657565/94‑1 (MQ=60)
GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGT > SRR4302542.5945518/1‑94 (MQ=60)
GGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGTG > SRR4302542.7316506/1‑94 (MQ=60)
GGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGTG < SRR4302542.506982/94‑1 (MQ=60)
GAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGTGA < SRR4302542.4733869/94‑1 (MQ=60)
AGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGTGAC > SRR4302542.6030852/1‑94 (MQ=60)
AGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGTGAC > SRR4302542.7381675/1‑94 (MQ=60)
AGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGTGAC < SRR4302542.6703095/94‑1 (MQ=60)
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TATGTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGC‑GGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGTGAC > NC_000913/4154942‑4155127
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
