Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,175,949	+G	intergenic (+82/‑76)	nusG → / → rplK	NusG/50S ribosomal subunit protein L11

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,175,947	1	.	G	99.6%	934.4 / ‑4.5	276	intergenic (+80/‑78)	nusG/rplK	NusG/50S ribosomal subunit protein L11
Reads supporting (aligned to +/- strand): ref base . (1/0); new base G (132/143); total (133/143)
Fisher's exact test for biased strand distribution p-value = 4.82e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

Only 100 of 306 total aligned reads displayed.

TGAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTAT‑GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGA  >  NC_000913/4175855‑4176034

 gAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTAT‑g                                                                                        <  2:6700182/93‑1 (MQ=255)

 gAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTAT‑g                                                                                        >  1:5700224/1‑93 (MQ=255)

  aaaaaGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTAT‑gg                                                                                       <  1:7363606/93‑1 (MQ=255)

  aaaaaGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTAT‑gg                                                                                       <  2:6919515/93‑1 (MQ=255)

   aaaaGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCCGCGCCTTTTGTTTTTAT‑gg                                                                                       <  1:1135125/93‑1 (MQ=255)

    aaaGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTAT‑gggc                                                                                     >  1:1560338/1‑91 (MQ=255)

      aGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTAT‑gggcct                                                                                   >  2:3681414/1‑89 (MQ=255)

      aGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTAT‑gggcct                                                                                   <  1:3470179/93‑5 (MQ=255)

        ccTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTg                                                                                  >  2:2101869/1‑93 (MQ=255)

           aaCCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGccc                                                                               >  2:3543067/1‑93 (MQ=255)

              ccAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTa                                                                            >  2:5251605/1‑93 (MQ=255)

               cAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTaa                                                                           >  1:2371443/1‑93 (MQ=255)

               cAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTaa                                                                           >  2:219182/1‑93 (MQ=255)

                 gCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTaaaa                                                                         >  2:4243289/1‑93 (MQ=255)

                 gCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTaaaa                                                                         >  2:241558/1‑93 (MQ=255)

                 gCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTaaaa                                                                         <  1:3586987/93‑1 (MQ=255)

                  cGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAAc                                                                        >  1:3931276/1‑93 (MQ=255)

                   gATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACg                                                                       >  2:3058972/1‑93 (MQ=255)

                    aTCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGa                                                                      <  1:2499615/93‑1 (MQ=255)

                    aTCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGa                                                                      <  1:700644/93‑1 (MQ=255)

                    aTCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGa                                                                      <  1:7418103/93‑1 (MQ=255)

                     tCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAt                                                                     <  1:653753/93‑1 (MQ=255)

                     tCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAt                                                                     >  1:2064385/1‑93 (MQ=255)

                     tCAAAAAAGCGGCGATTTAATCGTTGCACAAGGAGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAt                                                                     >  2:2014735/1‑93 (MQ=255)

                      cAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAtt                                                                    >  1:5748544/1‑93 (MQ=255)

                      cAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAtt                                                                    <  2:4552744/93‑1 (MQ=255)

                      cAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAtt                                                                    <  1:2608565/93‑1 (MQ=255)

                        aaaaaGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAtttt                                                                  >  1:5105248/1‑93 (MQ=255)

                         aaaaGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAttttt                                                                 <  2:391641/93‑1 (MQ=255)

                            aGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTtat                                                              >  2:7484608/1‑93 (MQ=255)

                            aGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTtat                                                              >  2:3490518/1‑93 (MQ=255)

                            aGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTtat                                                              <  1:857293/93‑1 (MQ=255)

                             gcggcgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTtata                                                             >  1:3615819/1‑93 (MQ=255)

                             gcggcgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTtata                                                             >  2:2292837/1‑93 (MQ=255)

                             gcggcgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTtata                                                             <  1:6127754/93‑1 (MQ=255)

                               ggcgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATc                                                           >  2:5761749/1‑93 (MQ=255)

                                gcgATTTAATCGTTGCACAAGGCGTGAGATTGGAATATAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCa                                                          >  2:2822980/1‑93 (MQ=255)

                                 cgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCAc                                                         <  1:6284188/93‑1 (MQ=255)

                                   aTTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACgg                                                       <  1:7020992/93‑1 (MQ=255)

                                    tttAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACggg                                                      <  2:4576521/93‑1 (MQ=255)

                                    tttAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACggg                                                      <  2:5662951/93‑1 (MQ=255)

                                      tAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGa                                                    <  2:157914/93‑1 (MQ=255)

                                       aaTCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAg                                                   >  2:2736770/1‑93 (MQ=255)

                                        aTCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGc                                                  <  2:4684154/93‑1 (MQ=255)

                                         tCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGcc                                                 <  1:6611334/93‑1 (MQ=255)

                                         tCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGcc                                                 >  1:5475609/1‑93 (MQ=255)

                                           gTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCctc                                               >  1:2261517/1‑93 (MQ=255)

                                            ttGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCctct                                              >  1:5912738/1‑93 (MQ=255)

                                             tGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCtctc                                             <  2:1620640/93‑1 (MQ=255)

                                              gCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCa                                            >  2:2947106/1‑93 (MQ=255)

                                                acaAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCaga                                          <  1:4079927/93‑1 (MQ=255)

                                                acaAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCaga                                          >  2:3976878/1‑93 (MQ=255)

                                                acaAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCaga                                          <  1:1825480/93‑1 (MQ=255)

                                                acaAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCaga                                          <  1:3073819/93‑1 (MQ=255)

                                                  aaGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAgg                                        <  2:1989003/93‑1 (MQ=255)

                                                  aaGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAgg                                        >  2:6041018/1‑93 (MQ=255)

                                                   aGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGc                                       <  2:5578491/93‑1 (MQ=255)

                                                    ggCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCg                                      >  1:4575503/1‑93 (MQ=255)

                                                       gTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGtta                                   >  2:3741005/1‑93 (MQ=255)

                                                          agaTTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGttatta                                >  1:4344897/1‑93 (MQ=255)

                                                          agaTTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGttatta                                >  2:5135499/1‑93 (MQ=255)

                                                           gaTTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTAc                               >  1:3373016/1‑93 (MQ=255)

                                                           gaTTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTAc                               <  1:3229314/93‑1 (MQ=255)

                                                            aTTGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTAcc                              <  2:2331677/93‑1 (MQ=255)

                                                             ttGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTAccc                             <  2:2662222/93‑1 (MQ=255)

                                                             ttGGAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTAccc                             <  1:5833551/93‑1 (MQ=255)

                                                                gAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAAc                          <  1:1391227/93‑1 (MQ=255)

                                                                gAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAAc                          >  2:6409692/1‑93 (MQ=255)

                                                                gAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAAc                          <  2:7331760/93‑1 (MQ=255)

                                                                gAATACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAAc                          <  1:1466703/93‑1 (MQ=255)

                                                                 aaTACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACt                         <  2:1383943/93‑1 (MQ=255)

                                                                 aaTACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACt                         >  2:5467348/1‑93 (MQ=255)

                                                                  aTACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACtt                        <  2:438395/93‑1 (MQ=255)

                                                                  aTACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACtt                        >  2:1162585/1‑93 (MQ=255)

                                                                  aTACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACtt                        >  1:2742823/1‑93 (MQ=255)

                                                                   tACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTg                       >  2:1040219/1‑93 (MQ=255)

                                                                   tACAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTg                       >  2:6473634/1‑93 (MQ=255)

                                                                    aCAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGa                      >  1:7210598/1‑93 (MQ=255)

                                                                     cAATTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAg                     <  1:6840456/93‑1 (MQ=255)

                                                                       aTTT‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGa                   >  1:5042660/1‑93 (MQ=255)

                                                                        ttt‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGaa                  >  1:631484/1‑93 (MQ=255)

                                                                         tt‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAAt                 <  2:3377655/93‑1 (MQ=255)

                                                                         tt‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAAt                 <  2:6647168/93‑1 (MQ=255)

                                                                          t‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAAtt                <  2:2465795/93‑1 (MQ=255)

                                                                          t‑CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAAtt                <  2:5002578/93‑1 (MQ=255)

                                                                            cgcgCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAAttt               >  1:6396607/1‑93 (MQ=255)

                                                                               gcCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTtata            <  1:2918983/93‑1 (MQ=255)

                                                                               gcCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTtata            >  1:1788976/1‑93 (MQ=255)

                                                                               gcCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTtata            >  2:776643/1‑93 (MQ=255)

                                                                                ccTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATaa           <  2:7013096/93‑1 (MQ=255)

                                                                                 cTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAAt          <  1:4268637/93‑1 (MQ=255)

                                                                                  ttttGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATg         <  1:7520332/93‑1 (MQ=255)

                                                                                  ttttGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATg         >  1:3773412/1‑93 (MQ=255)

                                                                                   tttGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATgg        >  1:6237210/1‑93 (MQ=255)

                                                                                   tttGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATgg        >  1:5019656/1‑93 (MQ=255)

                                                                                   tttGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATgg        >  2:6239536/1‑93 (MQ=255)

                                                                                    ttGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGc       <  1:5527676/93‑1 (MQ=255)

                                                                                    ttGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGc       >  2:4884394/1‑93 (MQ=255)

                                                                                       tttttATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTaa    >  2:7146482/1‑93 (MQ=255)

                                                                                         tttATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGa  >  2:4466533/1‑93 (MQ=255)

TGAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTAT‑GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGA  >  NC_000913/4175855‑4176034

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

AAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑AT‑GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAA  >  NC_000913/4175857‑4176042

AAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑AT‑GGG                                                                                              >  SRR4302542.6889892/1‑94 (MQ=60)

AAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑AT‑GGG                                                                                              >  SRR4302542.5578895/1‑94 (MQ=60)

AAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑AT‑GGG                                                                                              <  SRR4302542.7435733/94‑1 (MQ=60)

 AAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCCGCGCCTTTTGTTTTT‑AT‑GGG                                                                                              <  SRR4302542.1144845/94‑1 (MQ=60)

 AAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑AT‑GGGC                                                                                             >  SRR4302542.1573822/1‑94 (MQ=60)

   AAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCT                                                                                            >  SRR4302542.7464673/1‑94 (MQ=60)

   AAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCT                                                                                            >  SRR4302542.1555588/1‑94 (MQ=60)

    AGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTT                                                                                           <  SRR4302542.3502673/94‑1 (MQ=60)

     GCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTG                                                                                          <  SRR4302542.5799535/94‑1 (MQ=60)

      CCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGC                                                                                         <  SRR4302542.5150138/94‑1 (MQ=60)

        TAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCC                                                                                       >  SRR4302542.6602431/1‑94 (MQ=60)

         AACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTTAAG‑GGCCTTGCCCG                                                                                      >  SRR4302542.7078469/1‑94 (MQ=60)

         AACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCG                                                                                      >  SRR4302542.2590159/1‑94 (MQ=60)

            CCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAA                                                                                   >  SRR4302542.2392294/1‑94 (MQ=60)

             CAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAA                                                                                  >  SRR4302542.364726/1‑94 (MQ=60)

             CAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAA                                                                                  >  SRR4302542.3987741/1‑94 (MQ=60)

               GCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAAC                                                                                <  SRR4302542.3620443/94‑1 (MQ=60)

               GCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAAC                                                                                >  SRR4302542.3970068/1‑94 (MQ=60)

                CGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACG                                                                               <  SRR4302542.6433043/94‑1 (MQ=60)

                CGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACG                                                                               <  SRR4302542.5874520/94‑1 (MQ=60)

                  annnnnaaagcnnnnnnTTAATCGNNNNACNNNGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑NTNNGCCTTGNCCGTAAAACGNN                                                                             >  SRR4302542.3489765/18‑94 (MQ=58)

                  ATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGAT                                                                             <  SRR4302542.7414057/94‑1 (MQ=60)

                  ATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGAT                                                                             <  SRR4302542.706714/94‑1 (MQ=60)

                  ATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGAT                                                                             >  SRR4302542.1423890/1‑94 (MQ=60)

                  ATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGAT                                                                             >  SRR4302542.2082232/1‑94 (MQ=60)

                  ATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGAT                                                                             >  SRR4302542.6532442/1‑94 (MQ=60)

                  ATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGAT                                                                             <  SRR4302542.2523852/94‑1 (MQ=60)

                  ATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGAT                                                                             <  SRR4302542.7490686/94‑1 (MQ=60)

                   TCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATT                                                                            <  SRR4302542.659399/94‑1 (MQ=60)

                   TCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATT                                                                            >  SRR4302542.5804342/1‑94 (MQ=60)

                   TCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATT                                                                            >  SRR4302542.2148261/1‑94 (MQ=60)

                   TCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATT                                                                            <  SRR4302542.1277585/94‑1 (MQ=60)

                   TCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATT                                                                            >  SRR4302542.5553170/1‑94 (MQ=60)

                    CAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTT                                                                           <  SRR4302542.2434253/94‑1 (MQ=60)

                    CAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTT                                                                           <  SRR4302542.2633788/94‑1 (MQ=60)

                    CAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTT                                                                           <  SRR4302542.6301916/94‑1 (MQ=60)

                     AAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTT                                                                          >  SRR4302542.5154840/1‑94 (MQ=60)

                      AAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTT                                                                         <  SRR4302542.1008581/94‑1 (MQ=60)

                       AAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTT                                                                        <  SRR4302542.851992/94‑1 (MQ=60)

                        AAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTA                                                                       >  SRR4302542.3213973/1‑94 (MQ=60)

                         AAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTAT                                                                      <  SRR4302542.5642527/94‑1 (MQ=60)

                          AGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATA                                                                     >  SRR4302542.2905143/1‑94 (MQ=60)

                          AGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATA                                                                     >  SRR4302542.3649512/1‑94 (MQ=60)

                          AGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATA                                                                     <  SRR4302542.864682/94‑1 (MQ=60)

                          AGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATA                                                                     <  SRR4302542.407025/94‑1 (MQ=60)

                           GCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATAT                                                                    <  SRR4302542.575210/94‑1 (MQ=60)

                           GCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATAT                                                                    <  SRR4302542.5119717/94‑1 (MQ=60)

                           GCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATAT                                                                    <  SRR4302542.6187047/94‑1 (MQ=60)

                            CGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATC                                                                   >  SRR4302542.4147238/1‑94 (MQ=60)

                            CGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATC                                                                   >  SRR4302542.5068671/1‑94 (MQ=60)

                            CGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATC                                                                   <  SRR4302542.2749358/94‑1 (MQ=60)

                            CGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATC                                                                   <  SRR4302542.6257953/94‑1 (MQ=60)

                             GGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCA                                                                  <  SRR4302542.6378967/94‑1 (MQ=60)

                              GCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCAC                                                                 <  SRR4302542.1872941/94‑1 (MQ=60)

                              GCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCAC                                                                 <  SRR4302542.3768599/94‑1 (MQ=60)

                              GCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCAC                                                                 <  SRR4302542.2329181/94‑1 (MQ=60)

                              GCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCAC                                                                 <  SRR4302542.7481638/94‑1 (MQ=60)

                               CGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACG                                                                <  SRR4302542.7066004/94‑1 (MQ=60)

                               CGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACG                                                                <  SRR4302542.6346114/94‑1 (MQ=60)

                               CGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACG                                                                >  SRR4302542.6348184/1‑94 (MQ=60)

                                GATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGG                                                               <  SRR4302542.2406039/94‑1 (MQ=60)

                                 ATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGG                                                              >  SRR4302542.2965423/1‑94 (MQ=60)

                                 ATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGG                                                              <  SRR4302542.7089982/94‑1 (MQ=60)

                                  TTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGG                                                             >  SRR4302542.6634167/1‑94 (MQ=60)

                                    TAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAG                                                           <  SRR4302542.2316204/94‑1 (MQ=60)

                                     AATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGC                                                          >  SRR4302542.5937819/1‑94 (MQ=60)

                                      ATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCC                                                         <  SRR4302542.3456352/94‑1 (MQ=60)

                                      ATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCC                                                         >  SRR4302542.5528803/1‑94 (MQ=60)

                                      ATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCC                                                         <  SRR4302542.3027991/94‑1 (MQ=60)

                                       TCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCT                                                        <  SRR4302542.6676462/94‑1 (MQ=60)

                                        CGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTC                                                       >  SRR4302542.2124213/1‑94 (MQ=60)

                                        CGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTC                                                       >  SRR4302542.2280959/1‑94 (MQ=60)

                                         GTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCT                                                      >  SRR4302542.5970037/1‑94 (MQ=60)

                                         GTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCT                                                      <  SRR4302542.6316652/94‑1 (MQ=60)

                                          TTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTC                                                     <  SRR4302542.2542759/94‑1 (MQ=60)

                                           TGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCA                                                    <  SRR4302542.1670168/94‑1 (MQ=60)

                                            GCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAG                                                   <  SRR4302542.4288798/94‑1 (MQ=60)

                                             CACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGA                                                  >  SRR4302542.6252066/1‑94 (MQ=60)

                                              ACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAG                                                 <  SRR4302542.4120137/94‑1 (MQ=60)

                                              ACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAG                                                 <  SRR4302542.1841287/94‑1 (MQ=60)

                                              ACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAG                                                 >  SRR4302542.3183349/1‑94 (MQ=60)

                                              ACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAG                                                 <  SRR4302542.1811826/94‑1 (MQ=60)

                                              ACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAG                                                 >  SRR4302542.55931/1‑94 (MQ=60)

                                              ACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAG                                                 <  SRR4302542.3103112/94‑1 (MQ=60)

                                               CAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGG                                                >  SRR4302542.6156893/1‑94 (MQ=60)

                                                AAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGC                                               <  SRR4302542.7502939/94‑1 (MQ=60)

                                                AAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGC                                               <  SRR4302542.3542473/94‑1 (MQ=60)

                                                AAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGC                                               >  SRR4302542.583560/1‑94 (MQ=60)

                                                 AGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCG                                              >  SRR4302542.4620270/1‑94 (MQ=60)

                                                   GCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTT                                            <  SRR4302542.5083161/94‑1 (MQ=60)

                                                   GCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTT                                            <  SRR4302542.7555507/94‑1 (MQ=60)

                                                     GTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTAT                                          <  SRR4302542.1731631/94‑1 (MQ=60)

                                                     GTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTAT                                          <  SRR4302542.1833046/94‑1 (MQ=60)

                                                       GAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTA                                        >  SRR4302542.4387583/1‑94 (MQ=60)

                                                        AGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTAC                                       >  SRR4302542.3404701/1‑94 (MQ=60)

                                                        AGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTAC                                       >  SRR4302542.3735741/1‑94 (MQ=60)

                                                        AGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTAC                                       >  SRR4302542.4332722/1‑94 (MQ=60)

                                                         GATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACC                                      <  SRR4302542.3259861/94‑1 (MQ=60)

                                                          ATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCC                                     >  SRR4302542.1484336/1‑94 (MQ=60)

                                                          ATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCC                                     >  SRR4302542.3951216/1‑94 (MQ=60)

                                                          ATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCC                                     >  SRR4302542.7221764/1‑94 (MQ=60)

                                                           TTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCA                                    <  SRR4302542.5890149/94‑1 (MQ=60)

                                                              GAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACT                                 <  SRR4302542.1403238/94‑1 (MQ=60)

                                                              GAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACT                                 >  SRR4302542.3635892/1‑94 (MQ=60)

                                                              GAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACT                                 >  SRR4302542.6032329/1‑94 (MQ=60)

                                                              GAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACT                                 >  SRR4302542.7270698/1‑94 (MQ=60)

                                                              GAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACT                                 <  SRR4302542.1479364/94‑1 (MQ=60)

                                                              GAATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACT                                 <  SRR4302542.7297252/94‑1 (MQ=60)

                                                               AATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTT                                >  SRR4302542.145230/1‑94 (MQ=60)

                                                               AATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTT                                >  SRR4302542.2769264/1‑94 (MQ=60)

                                                                ATACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTG                               >  SRR4302542.5972806/1‑94 (MQ=60)

                                                                 TACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGA                              >  SRR4302542.3546526/1‑94 (MQ=60)

                                                                 TACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGA                              >  SRR4302542.7281353/1‑94 (MQ=60)

                                                                  ACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAG                             <  SRR4302542.8474/94‑1 (MQ=60)

                                                                  ACAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAG                             <  SRR4302542.5757627/94‑1 (MQ=60)

                                                                   CAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGG                            <  SRR4302542.6907661/94‑1 (MQ=60)

                                                                   CAATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGG                            >  SRR4302542.5320155/1‑94 (MQ=60)

                                                                    AATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGA                           >  SRR4302542.5091609/1‑94 (MQ=60)

                                                                     ATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAA                          >  SRR4302542.6601385/1‑94 (MQ=60)

                                                                     ATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAA                          >  SRR4302542.636927/1‑94 (MQ=60)

                                                                     ATTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAA                          <  SRR4302542.3263561/94‑1 (MQ=60)

                                                                      TTT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAAT                         <  SRR4302542.2855491/94‑1 (MQ=60)

                                                                       TT‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATT                        <  SRR4302542.3381254/94‑1 (MQ=60)

                                                                        T‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTT                       >  SRR4302542.6459627/1‑94 (MQ=60)

                                                                        T‑CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTT                       <  SRR4302542.4891734/94‑1 (MQ=60)

                                                                          CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTA                      >  SRR4302542.634467/1‑94 (MQ=60)

                                                                          CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTA                      >  SRR4302542.7079735/1‑94 (MQ=60)

                                                                           GCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTAT                     <  SRR4302542.968059/94‑1 (MQ=60)

                                                                           GCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTAT                     <  SRR4302542.4802387/94‑1 (MQ=60)

                                                                           GCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTAT                     <  SRR4302542.4310687/94‑1 (MQ=60)

                                                                            CGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATA                    >  SRR4302542.6857529/1‑94 (MQ=60)

                                                                            CGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATA                    >  SRR4302542.4432500/1‑94 (MQ=60)

                                                                            CGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATA                    >  SRR4302542.1804505/1‑94 (MQ=60)

                                                                             GCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAA                   <  SRR4302542.2946968/94‑1 (MQ=60)

                                                                               CTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATG                 >  SRR4302542.3810735/1‑94 (MQ=60)

                                                                               CTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATG                 >  SRR4302542.4563991/1‑94 (MQ=60)

                                                                               CTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATG                 <  SRR4302542.6942319/94‑1 (MQ=60)

                                                                               CTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATG                 <  SRR4302542.4310645/94‑1 (MQ=60)

                                                                               CTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATG                 >  SRR4302542.1875915/1‑94 (MQ=60)

                                                                                TTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGG                >  SRR4302542.2663634/1‑94 (MQ=60)

                                                                                TTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGG                >  SRR4302542.5068400/1‑94 (MQ=60)

                                                                                TTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGG                <  SRR4302542.7594291/94‑1 (MQ=60)

                                                                                TTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGG                >  SRR4302542.6298612/1‑94 (MQ=60)

                                                                                  TTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCT              <  SRR4302542.5581402/94‑1 (MQ=60)

                                                                                    GTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAA            >  SRR4302542.1346772/1‑94 (MQ=60)

                                                                                     TTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAG           <  SRR4302542.5930843/94‑1 (MQ=60)

                                                                                      TTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGA          >  SRR4302542.3489573/1‑94 (MQ=60)

                                                                                         T‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAG       <  SRR4302542.1596516/94‑1 (MQ=60)

                                                                                         T‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAG       >  SRR4302542.1244068/1‑94 (MQ=60)

                                                                                           atgGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGT      >  SRR4302542.485715/4‑94 (MQ=60)

                                                                                            tgGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTA     >  SRR4302542.2855265/3‑94 (MQ=60)

                                                                                            G‑GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTAC    <  SRR4302542.4527292/94‑1 (MQ=60)

                                                                                            G‑GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTAC    <  SRR4302542.4679506/94‑1 (MQ=60)

                                                                                            G‑GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTAC    <  SRR4302542.1199825/94‑1 (MQ=60)

                                                                                            G‑GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTAC    <  SRR4302542.6619703/94‑1 (MQ=60)

                                                                                              GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACA   <  SRR4302542.59340/94‑1 (MQ=60)

                                                                                               GCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAA  <  SRR4302542.6512195/94‑1 (MQ=60)

                                                                                               GCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAA  >  SRR4302542.1350631/1‑94 (MQ=60)

                                                                                               GCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAA  <  SRR4302542.6959245/94‑1 (MQ=60)

AAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTT‑CGCGCCTTTTGTTTTT‑AT‑GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAA  >  NC_000913/4175857‑4176042

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`