Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,220,652	A→G	Y199H (TAT→CAT)	iclR ←	IclR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,220,652	0	A	G	87.5%	810.6 / 97.1	321	Y199H (TAT→CAT)	iclR	IclR
Reads supporting (aligned to +/- strand): ref base A (18/22); new base G (145/136); total (163/158)
Fisher's exact test for biased strand distribution p-value = 5.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.84e-01

Only 100 of 330 total aligned reads displayed.

TGTTCCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGCGTGCA  >  NC_000913/4220561‑4220741

 gTTCCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATggg                                                                                         >  1:6961573/1‑93 (MQ=255)

   tCCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCa                                                                                       >  1:1837723/1‑93 (MQ=255)

    ccTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCAt                                                                                      >  1:85797/1‑93 (MQ=255)

     cTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATg                                                                                     >  2:5740327/1‑93 (MQ=255)

      tCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGt                                                                                    <  1:2855505/93‑1 (MQ=255)

       cATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTa                                                                                   <  2:3301733/93‑1 (MQ=255)

        aTCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTaa                                                                                  >  1:5154967/1‑93 (MQ=255)

         tCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAAc                                                                                 >  1:3999285/1‑93 (MQ=255)

         tCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAAc                                                                                 >  1:2425977/1‑93 (MQ=255)

          cGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAAcc                                                                                <  1:4980194/93‑1 (MQ=255)

           gTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAAccc                                                                               <  1:4536750/93‑1 (MQ=255)

           gTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAAccc                                                                               <  1:5353047/93‑1 (MQ=255)

           gTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGAATGGGCA‑GGAACCCt                                                                              >  1:6269317/1‑93 (MQ=255)

            tCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGCAACCCt                                                                              <  2:7094141/93‑1 (MQ=255)

              aaaTGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCttt                                                                            <  1:6305648/93‑1 (MQ=255)

               aaTGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTg                                                                           >  1:2727217/1‑93 (MQ=255)

               aaTGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTg                                                                           >  2:735233/1‑93 (MQ=255)

               aaTGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTCTg                                                                           <  2:3087314/93‑1 (MQ=255)

                aTGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGc                                                                          >  1:1091503/1‑93 (MQ=255)

                 tGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCg                                                                         >  2:4381191/1‑93 (MQ=255)

                  gAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCgg                                                                        >  2:2027752/1‑93 (MQ=255)

                   aaTAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGt                                                                       <  1:2632706/93‑1 (MQ=255)

                   aaTAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGt                                                                       >  2:7173061/1‑93 (MQ=255)

                     tAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTgc                                                                     <  1:366752/93‑1 (MQ=255)

                      aaCCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTgca                                                                    >  2:699327/1‑93 (MQ=255)

                       aCCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTgcag                                                                   >  1:4172714/1‑93 (MQ=255)

                        ccccGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTCTGGGCATGTAACCCTTTGCGGTgcagc                                                                  <  2:5164010/93‑1 (MQ=255)

                         cccGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTgcagca                                                                 <  1:5240902/93‑1 (MQ=255)

                         cccGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTgcagca                                                                 >  2:1135220/1‑93 (MQ=255)

                          ccGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGcagcag                                                                >  2:4105000/1‑93 (MQ=255)

                          ccGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGcagcag                                                                >  1:1329961/1‑93 (MQ=255)

                           cGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCagcagc                                                               <  2:6184940/93‑1 (MQ=255)

                            gTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCt                                                              >  1:2326375/1‑93 (MQ=255)

                            gTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCt                                                              <  1:5863777/93‑1 (MQ=255)

                             tttGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCtt                                                             >  2:4228279/1‑93 (MQ=255)

                             tttGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCtt                                                             <  1:7306850/93‑1 (MQ=255)

                             tttGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCtt                                                             >  1:4576018/1‑93 (MQ=255)

                              ttGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTc                                                            <  1:5647172/93‑1 (MQ=255)

                              ttGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTTGCGGTGCAGCAGCTTc                                                            >  2:2831690/1‑93 (MQ=255)

                              ttGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTTGCGGTGCAGCAGCTTc                                                            <  2:3857020/93‑1 (MQ=255)

                               tGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCg                                                           <  2:1433057/93‑1 (MQ=255)

                                    gTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCAcc                                                      >  1:3757181/1‑93 (MQ=255)

                                    gTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCAcc                                                      >  2:5590503/1‑93 (MQ=255)

                                        gggCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGtt                                                  <  1:3916589/93‑1 (MQ=255)

                                         ggCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGttc                                                 >  1:1879322/1‑93 (MQ=255)

                                         ggCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGttc                                                 >  2:3381705/1‑93 (MQ=255)

                                          gCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGttct                                                <  1:5207897/93‑1 (MQ=255)

                                          gCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGttct                                                <  1:3219440/93‑1 (MQ=255)

                                           cGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGttctt                                               <  2:3909192/93‑1 (MQ=255)

                                            gagaTCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGttcttc                                              >  2:4916287/1‑93 (MQ=255)

                                            gagaTCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGttcttc                                              >  1:7094407/1‑93 (MQ=255)

                                            gagaTCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGttcttc                                              >  1:2522373/1‑93 (MQ=255)

                                            gagaTCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGttcttc                                              >  2:3672343/1‑93 (MQ=255)

                                            gagaTCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGttcttc                                              <  2:6391483/93‑1 (MQ=255)

                                              gaTCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGc                                            >  1:6180916/1‑93 (MQ=255)

                                               aTCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCt                                           >  1:3042025/1‑93 (MQ=255)

                                               aTCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCt                                           >  2:6226131/1‑93 (MQ=255)

                                                tcttctTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTc                                          >  2:5623294/1‑93 (MQ=255)

                                                 cttcttTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCa                                         >  1:7456860/1‑93 (MQ=255)

                                                 cttcttTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCa                                         >  1:2031753/1‑93 (MQ=255)

                                                   tcttTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGt                                       >  2:4654708/1‑93 (MQ=255)

                                                   tcttTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGt                                       >  2:4554817/1‑93 (MQ=255)

                                                   tcttTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGt                                       <  1:5441452/93‑1 (MQ=255)

                                                    cttTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGtt                                      >  2:5002917/1‑93 (MQ=255)

                                                    cttTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGtt                                      <  2:2373769/93‑1 (MQ=255)

                                                    cttTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGtt                                      <  1:2159515/93‑1 (MQ=255)

                                                     ttttAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTg                                     <  2:2277900/93‑1 (MQ=255)

                                                      tttAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTgg                                    >  1:6046384/1‑93 (MQ=255)

                                                      tttAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTgg                                    <  1:1514218/93‑1 (MQ=255)

                                                         aaaTGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCt                                 >  1:3553115/1‑93 (MQ=255)

                                                            tGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTaaa                              <  2:1655103/93‑1 (MQ=255)

                                                             gCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTaaaa                             <  2:5869967/93‑1 (MQ=255)

                                                             gCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTaaaa                             <  2:5660051/93‑1 (MQ=255)

                                                              cacaGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTaaaaa                            <  2:4197224/93‑1 (MQ=255)

                                                               acaGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAg                           >  1:1036886/1‑93 (MQ=255)

                                                                caGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAgg                          >  2:7267195/1‑93 (MQ=255)

                                                                 aGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGc                         <  1:4956570/93‑1 (MQ=255)

                                                                  ggAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCt                        <  2:6482126/93‑1 (MQ=255)

                                                                   gagaCACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCtt                       <  1:4312000/93‑1 (MQ=255)

                                                                   gagaCACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCtt                       >  1:4735327/1‑93 (MQ=255)

                                                                   gagaCACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCtt                       >  2:3545339/1‑93 (MQ=255)

                                                                    agaCACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCttt                      <  1:5974052/93‑1 (MQ=255)

                                                                    agaCACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCttt                      <  1:6744240/93‑1 (MQ=255)

                                                                    agaCACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCttt                      <  1:1443806/93‑1 (MQ=255)

                                                                    agaCACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCttt                      <  1:3463406/93‑1 (MQ=255)

                                                                     gaCACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTa                     <  2:1276202/93‑1 (MQ=255)

                                                                     gaCACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTa                     <  2:3215780/93‑1 (MQ=255)

                                                                         ccAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCg                 >  1:5525390/1‑93 (MQ=255)

                                                                         ccAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCg                 >  2:3112255/1‑93 (MQ=255)

                                                                           aGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCa               >  2:6721313/1‑93 (MQ=255)

                                                                            gCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCAc              <  2:7516622/93‑1 (MQ=255)

                                                                              gTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCg            >  2:6549756/1‑93 (MQ=255)

                                                                              gTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCg            >  2:5337959/1‑93 (MQ=255)

                                                                               ttGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCgg           >  1:5562015/1‑93 (MQ=255)

                                                                                  cGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAg        <  1:5146123/93‑1 (MQ=255)

                                                                                   gTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGc       >  2:6800571/1‑93 (MQ=255)

                                                                                       gTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGCGTGc   >  1:2084016/1‑93 (MQ=255)

                                                                                       gTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGCGTGc   >  2:496674/1‑93 (MQ=255)

                                                                                        tatgGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGCGTGCa  >  2:2988617/1‑93 (MQ=255)

                                                                                        tataGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGCGTGCa  >  1:4240250/1‑93 (MQ=255)

TGTTCCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGCGTGCA  >  NC_000913/4220561‑4220741

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CATGTTCCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGCGTGCATCGG  >  NC_000913/4220559‑4220745

CATGTTCCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATG                                                                                               >  SRR4302542.3907142/1‑94 (MQ=60)

CATGTTCCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATG                                                                                               >  SRR4302542.2818818/1‑94 (MQ=60)

CATGTTCCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATG                                                                                               >  SRR4302542.2459879/1‑94 (MQ=60)

 ATGTTCCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGG                                                                                              >  SRR4302542.1665641/1‑94 (MQ=60)

 ATGTTCCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGG                                                                                              <  SRR4302542.7366971/94‑1 (MQ=60)

  TGTTGCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGG                                                                                             >  SRR4302542.7573169/1‑94 (MQ=60)

  TGTTCCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGG                                                                                             >  SRR4302542.1075225/1‑94 (MQ=60)

  TGTTCCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGG                                                                                             <  SRR4302542.4930746/94‑1 (MQ=60)

  TGTTCCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGG                                                                                             <  SRR4302542.2047122/94‑1 (MQ=60)

  TGTTCCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGG                                                                                             >  SRR4302542.7029969/1‑94 (MQ=60)

  TGTTCCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGG                                                                                             >  SRR4302542.3863515/1‑94 (MQ=60)

  TGTTCCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGG                                                                                             <  SRR4302542.5306796/94‑1 (MQ=60)

    TTCCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCA                                                                                           <  SRR4302542.5197378/94‑1 (MQ=60)

    TTCCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCA                                                                                           >  SRR4302542.1853627/1‑94 (MQ=60)

     TCCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCAT                                                                                          >  SRR4302542.86512/1‑94 (MQ=60)

     TCCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCAT                                                                                          <  SRR4302542.4406442/94‑1 (MQ=60)

     TCCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCAT                                                                                          <  SRR4302542.4405220/94‑1 (MQ=60)

     TCCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCAT                                                                                          >  SRR4302542.706663/1‑94 (MQ=60)

      CCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATG                                                                                         <  SRR4302542.7215774/94‑1 (MQ=60)

      CCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATG                                                                                         <  SRR4302542.5236760/94‑1 (MQ=60)

       CTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGT                                                                                        >  SRR4302542.3698573/1‑94 (MQ=60)

       CTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGT                                                                                        <  SRR4302542.4194530/94‑1 (MQ=60)

        TCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTA                                                                                       <  SRR4302542.2882947/94‑1 (MQ=60)

         CATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAA                                                                                      >  SRR4302542.5205063/1‑94 (MQ=60)

         CATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAA                                                                                      <  SRR4302542.4260559/94‑1 (MQ=60)

          ATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCGTGTAAC                                                                                     >  SRR4302542.4719937/1‑94 (MQ=60)

          ATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAAC                                                                                     <  SRR4302542.2261450/94‑1 (MQ=60)

          ATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAAC                                                                                     >  SRR4302542.2449573/1‑94 (MQ=60)

          ATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAAC                                                                                     >  SRR4302542.4038729/1‑94 (MQ=60)

           TCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACC                                                                                    >  SRR4302542.4314503/1‑94 (MQ=60)

           TCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACC                                                                                    <  SRR4302542.5408536/94‑1 (MQ=60)

           TCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACC                                                                                    >  SRR4302542.6127083/1‑94 (MQ=60)

            CGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCC                                                                                   <  SRR4302542.5028539/94‑1 (MQ=60)

             GTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCT                                                                                  <  SRR4302542.304714/94‑1 (MQ=60)

             GTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCT                                                                                  >  SRR4302542.3749482/1‑94 (MQ=60)

             GTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCT                                                                                  <  SRR4302542.4581177/94‑1 (MQ=60)

             GTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCT                                                                                  <  SRR4302542.5405066/94‑1 (MQ=60)

               CAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTT                                                                                <  SRR4302542.1379568/94‑1 (MQ=60)

               CAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTT                                                                                <  SRR4302542.3628620/94‑1 (MQ=60)

                AAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTG                                                                               >  SRR4302542.409971/1‑94 (MQ=60)

                AAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTG                                                                               <  SRR4302542.2617794/94‑1 (MQ=60)

                AAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTG                                                                               >  SRR4302542.2753527/1‑94 (MQ=60)

                AAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTTG                                                                               <  SRR4302542.6367774/94‑1 (MQ=60)

                 AATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGC                                                                              >  SRR4302542.1100857/1‑94 (MQ=60)

                 AATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGC                                                                              >  SRR4302542.5005852/1‑94 (MQ=60)

                  ATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCG                                                                             <  SRR4302542.2797671/94‑1 (MQ=60)

                  ATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCG                                                                             >  SRR4302542.6501560/1‑94 (MQ=60)

                  ATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCG                                                                             >  SRR4302542.1477426/1‑94 (MQ=60)

                  ATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCG                                                                             <  SRR4302542.5356738/94‑1 (MQ=60)

                    GAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGT                                                                           >  SRR4302542.522132/1‑94 (MQ=60)

                     AATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTG                                                                          <  SRR4302542.2658138/94‑1 (MQ=60)

                       TAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCA                                                                        <  SRR4302542.369939/94‑1 (MQ=60)

                       TAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCA                                                                        >  SRR4302542.5006290/1‑94 (MQ=60)

                       TAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTTGCGGTGCA                                                                        <  SRR4302542.6562406/94‑1 (MQ=60)

                        AACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAG                                                                       >  SRR4302542.2907532/1‑94 (MQ=60)

                        AACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAG                                                                       >  SRR4302542.4213867/1‑94 (MQ=60)

                        AACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAG                                                                       >  SRR4302542.4525945/1‑94 (MQ=60)

                         ACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGC                                                                      >  SRR4302542.5585165/1‑94 (MQ=60)

                          CCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCA                                                                     <  SRR4302542.602853/94‑1 (MQ=60)

                          CCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTTGCGGTGCAGCA                                                                     >  SRR4302542.209607/1‑94 (MQ=60)

                           CCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAG                                                                    >  SRR4302542.7581621/1‑94 (MQ=60)

                           CCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAG                                                                    >  SRR4302542.1341414/1‑94 (MQ=60)

                           CCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAG                                                                    <  SRR4302542.5291854/94‑1 (MQ=60)

                            CCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGC                                                                   <  SRR4302542.266311/94‑1 (MQ=60)

                             GGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCT                                                                  >  SRR4302542.2411059/1‑94 (MQ=60)

                             CGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCT                                                                  >  SRR4302542.32662/1‑94 (MQ=60)

                             CGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCT                                                                  >  SRR4302542.2346317/1‑94 (MQ=60)

                             CGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCT                                                                  <  SRR4302542.6945906/94‑1 (MQ=60)

                              GTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTT                                                                 >  SRR4302542.4620787/1‑94 (MQ=60)

                              GTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTT                                                                 <  SRR4302542.5920630/94‑1 (MQ=60)

                              GTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTT                                                                 >  SRR4302542.3764926/1‑94 (MQ=60)

                              GTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGCATGGGCATGTAACCCTTTGCGGTGCAGCAGCTT                                                                 >  SRR4302542.3155844/1‑94 (MQ=60)

                               TTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTC                                                                <  SRR4302542.7378425/94‑1 (MQ=60)

                                TTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCG                                                               <  SRR4302542.2258978/94‑1 (MQ=60)

                                TTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCG                                                               <  SRR4302542.4657549/94‑1 (MQ=60)

                                TTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCG                                                               <  SRR4302542.5702013/94‑1 (MQ=60)

                                 TGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGT                                                              <  SRR4302542.5611890/94‑1 (MQ=60)

                                 TGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGT                                                              >  SRR4302542.990575/1‑94 (MQ=60)

                                   CGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCA                                                            >  SRR4302542.4916075/1‑94 (MQ=60)

                                    GCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCAC                                                           >  SRR4302542.3528144/1‑94 (MQ=60)

                                     CGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACC                                                          >  SRR4302542.1148136/1‑94 (MQ=60)

                                     CGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACC                                                          >  SRR4302542.3794351/1‑94 (MQ=60)

                                     CGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACC                                                          >  SRR4302542.4303119/1‑94 (MQ=60)

                                      GTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCT                                                         <  SRR4302542.5540015/94‑1 (MQ=60)

                                      GTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCT                                                         <  SRR4302542.7160568/94‑1 (MQ=60)

                                      GTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCT                                                         <  SRR4302542.3578971/94‑1 (MQ=60)

                                      GTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCT                                                         >  SRR4302542.3651831/1‑94 (MQ=60)

                                      GTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCT                                                         <  SRR4302542.1981749/94‑1 (MQ=60)

                                       TTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTG                                                        <  SRR4302542.6027814/94‑1 (MQ=60)

                                       TTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTG                                                        >  SRR4302542.7271692/1‑94 (MQ=60)

                                       TTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTG                                                        <  SRR4302542.6254430/94‑1 (MQ=60)

                                        TTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGT                                                       <  SRR4302542.4108271/94‑1 (MQ=60)

                                         TGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCGCCTGTT                                                      <  SRR4302542.4583904/94‑1 (MQ=60)

                                         TGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTT                                                      >  SRR4302542.5876790/1‑94 (MQ=60)

                                         TGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTT                                                      <  SRR4302542.1851545/94‑1 (MQ=60)

                                         TGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTT                                                      >  SRR4302542.3118632/1‑94 (MQ=60)

                                          GGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTC                                                     >  SRR4302542.1895593/1‑94 (MQ=60)

                                          GGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTC                                                     <  SRR4302542.3955237/94‑1 (MQ=60)

                                          GGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTC                                                     >  SRR4302542.3992321/1‑94 (MQ=60)

                                           GGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCT                                                    >  SRR4302542.6651507/1‑94 (MQ=60)

                                           GGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCT                                                    <  SRR4302542.6217861/94‑1 (MQ=60)

                                           GGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCT                                                    <  SRR4302542.2595941/94‑1 (MQ=60)

                                           GGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCT                                                    <  SRR4302542.1163173/94‑1 (MQ=60)

                                            GCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTT                                                   <  SRR4302542.3249910/94‑1 (MQ=60)

                                            GCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTT                                                   <  SRR4302542.5258548/94‑1 (MQ=60)

                                            GCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTT                                                   <  SRR4302542.6193480/94‑1 (MQ=60)

                                             CGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTC                                                  >  SRR4302542.7164012/1‑94 (MQ=60)

                                             CGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTC                                                  >  SRR4302542.271224/1‑94 (MQ=60)

                                             CGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTC                                                  >  SRR4302542.2401514/1‑94 (MQ=60)

                                             CGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTC                                                  >  SRR4302542.2546835/1‑94 (MQ=60)

                                             CGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTC                                                  <  SRR4302542.5951259/94‑1 (MQ=60)

                                             CGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTC                                                  >  SRR4302542.1885762/1‑94 (MQ=60)

                                             CGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTC                                                  >  SRR4302542.5438769/1‑94 (MQ=60)

                                              GAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCG                                                 >  SRR4302542.5545498/1‑94 (MQ=60)

                                               AGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGC                                                >  SRR4302542.6240874/1‑94 (MQ=60)

                                                GATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCT                                               >  SRR4302542.3071070/1‑94 (MQ=60)

                                                 ATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTC                                              >  SRR4302542.565573/1‑94 (MQ=60)

                                                 ATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTC                                              <  SRR4302542.5208704/94‑1 (MQ=60)

                                                  TCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCA                                             >  SRR4302542.7529887/1‑94 (MQ=60)

                                                  TCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCA                                             >  SRR4302542.2049330/1‑94 (MQ=60)

                                                  TCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCA                                             >  SRR4302542.7413071/1‑94 (MQ=60)

                                                   CTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAG                                            >  SRR4302542.1914182/1‑94 (MQ=60)

                                                    TTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGT                                           >  SRR4302542.5465979/1‑94 (MQ=60)

                                                     TCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTT                                          <  SRR4302542.5674337/94‑1 (MQ=60)

                                                     TCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTT                                          <  SRR4302542.5494317/94‑1 (MQ=60)

                                                     TCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTCCTTCGCTCAGTT                                          <  SRR4302542.6098159/94‑1 (MQ=60)

                                                      CTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTG                                         <  SRR4302542.2178116/94‑1 (MQ=60)

                                                      CTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTG                                         <  SRR4302542.7345102/94‑1 (MQ=60)

                                                      CTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTG                                         <  SRR4302542.1648671/94‑1 (MQ=60)

                                                       TTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGG                                        <  SRR4302542.514752/94‑1 (MQ=60)

                                                       TTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGG                                        >  SRR4302542.6104912/1‑94 (MQ=60)

                                                        TTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGG                                       <  SRR4302542.481712/94‑1 (MQ=60)

                                                        TTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGG                                       <  SRR4302542.2056025/94‑1 (MQ=60)

                                                        TTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGG                                       <  SRR4302542.1527300/94‑1 (MQ=60)

                                                          TAAATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCT                                     <  SRR4302542.5721738/94‑1 (MQ=60)

                                                          TAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCT                                     >  SRR4302542.3586320/1‑94 (MQ=60)

                                                            AATGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAA                                   >  SRR4302542.2300744/1‑94 (MQ=60)

                                                              TGCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAA                                 <  SRR4302542.2147145/94‑1 (MQ=60)

                                                               GCACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAA                                <  SRR4302542.5266522/94‑1 (MQ=60)

                                                               GCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAA                                <  SRR4302542.1874845/94‑1 (MQ=60)

                                                                CACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAG                               >  SRR4302542.1382779/1‑94 (MQ=60)

                                                                CACAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAG                               >  SRR4302542.1045797/1‑94 (MQ=60)

                                                                CACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAG                               <  SRR4302542.4607639/94‑1 (MQ=60)

                                                                  CAGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGC                             <  SRR4302542.7457652/94‑1 (MQ=60)

                                                                   AGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCT                            <  SRR4302542.528275/94‑1 (MQ=60)

                                                                   AGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCT                            <  SRR4302542.5004721/94‑1 (MQ=60)

                                                                   AGGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCT                            <  SRR4302542.3078383/94‑1 (MQ=60)

                                                                    GGAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTT                           >  SRR4302542.4781506/1‑94 (MQ=60)

                                                                    GGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTT                           <  SRR4302542.1527233/94‑1 (MQ=60)

                                                                     GAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTT                          <  SRR4302542.4354373/94‑1 (MQ=60)

                                                                     GAGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTT                          <  SRR4302542.5202687/94‑1 (MQ=60)

                                                                     GAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTA                          <  SRR4302542.1099714/94‑1 (MQ=60)

                                                                      AGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTA                         <  SRR4302542.1456267/94‑1 (MQ=60)

                                                                      AGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTA                         <  SRR4302542.3495843/94‑1 (MQ=60)

                                                                      AGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTA                         <  SRR4302542.6810606/94‑1 (MQ=60)

                                                                      AGACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTA                         <  SRR4302542.6031866/94‑1 (MQ=60)

                                                                       GACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTAC                        <  SRR4302542.6330658/94‑1 (MQ=60)

                                                                       GACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTAC                        <  SRR4302542.1476686/94‑1 (MQ=60)

                                                                       GACACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTAC                        >  SRR4302542.505344/1‑94 (MQ=60)

                                                                         CACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCC                      >  SRR4302542.693091/1‑94 (MQ=60)

                                                                         CACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCC                      >  SRR4302542.2480949/1‑94 (MQ=60)

                                                                         CACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCC                      <  SRR4302542.386807/94‑1 (MQ=60)

                                                                         CACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCC                      <  SRR4302542.6363784/94‑1 (MQ=60)

                                                                          ACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCG                     <  SRR4302542.3344551/94‑1 (MQ=60)

                                                                          ACCAGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCG                     >  SRR4302542.5579097/1‑94 (MQ=60)

                                                                             AGCGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCAC                  <  SRR4302542.4795595/94‑1 (MQ=60)

                                                                               CGTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCG                >  SRR4302542.6331319/1‑94 (MQ=60)

                                                                                GTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGG               >  SRR4302542.3986264/1‑94 (MQ=60)

                                                                                GTTGCGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGG               >  SRR4302542.5616059/1‑94 (MQ=60)

                                                                                    CGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGC           <  SRR4302542.2452302/94‑1 (MQ=60)

                                                                                    CGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGC           >  SRR4302542.2009180/1‑94 (MQ=60)

                                                                                    CGTGGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGC           <  SRR4302542.5196151/94‑1 (MQ=60)

                                                                                    CGTGGGTATAGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGC           <  SRR4302542.2658946/94‑1 (MQ=60)

                                                                                       GGGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGCGTG        >  SRR4302542.5649457/1‑94 (MQ=60)

                                                                                        GGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGCGTGC       >  SRR4302542.2102012/1‑94 (MQ=60)

                                                                                        GGTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGCGTGC       >  SRR4302542.2102013/1‑94 (MQ=60)

                                                                                         GTATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGCGTGCA      <  SRR4302542.4233255/94‑1 (MQ=60)

                                                                                         GTATAGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGCGTGCA      >  SRR4302542.4282048/1‑94 (MQ=60)

                                                                                         GTATAGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGCGTGCA      >  SRR4302542.287983/1‑94 (MQ=60)

                                                                                          TATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGCGTGCAT     >  SRR4302542.6781756/1‑94 (MQ=60)

                                                                                           ATGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGCGTGCATC    >  SRR4302542.3892103/1‑94 (MQ=60)

                                                                                            TGGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGCGTGCATCG   <  SRR4302542.5057837/94‑1 (MQ=60)

                                                                                             GGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGCGTGCTTCGG  <  SRR4302542.7036843/94‑1 (MQ=60)

                                                                                             GGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGCGTGCATCGG  <  SRR4302542.2336680/94‑1 (MQ=60)

                                                                                             AGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGCGTGCATCGG  >  SRR4302542.7592587/1‑94 (MQ=60)

CATGTTCCTCATCGTCAAATGAATAACCCCGTTTGCGCGTTTGGGCGAGATCTTCTTTTAAATGCACAGGAGACACCAGCGTTGCGTGGGTATAGGCATGTAACCCTTTGCGGTGCAGCAGCTTCGTCACCTGTTCTTCGCTCAGTTGGGCTAAAAAGGCTTTACCCGCACCGGAAGCGTGCATCGG  >  NC_000913/4220559‑4220745

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`