Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,413,828 A→G Y19H (TAT→CAT)  b4188 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,413,8280AG85.1% 771.8 / 123.9 329Y19H (TAT→CAT) b4188hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (18/31);  new base G (140/140);  total (158/171)
Fisher's exact test for biased strand distribution p-value = 9.09e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.35e-02

Only 100 of 330 total aligned reads displayed.

TTGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATC  >  NC_000913/4413737‑4413917
                                                                                           |                                                                                         
  gCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGt                                                                                        >  1:6397524/1‑93 (MQ=255)
  gCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATAAGt                                                                                        >  2:3515310/1‑93 (MQ=255)
   cTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTc                                                                                       <  2:7518676/93‑1 (MQ=255)
      aCTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACt                                                                                    >  2:5839033/1‑93 (MQ=255)
        tGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTaa                                                                                  >  2:3419696/1‑93 (MQ=255)
        tGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTaa                                                                                  <  2:4082462/93‑1 (MQ=255)
         gagaTCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAAt                                                                                 <  1:2666982/93‑1 (MQ=255)
           gaTCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTg                                                                               >  1:4981822/1‑93 (MQ=255)
           gaTCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTg                                                                               >  2:3314442/1‑93 (MQ=255)
           gaTCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTg                                                                               >  2:5336988/1‑93 (MQ=255)
           gaTCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATAAGTCACTAATTg                                                                               >  2:6350511/1‑93 (MQ=255)
            aTCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGc                                                                              <  1:1335316/93‑1 (MQ=255)
            aTCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGc                                                                              <  2:1639296/93‑1 (MQ=255)
            aTCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGc                                                                              <  1:1872291/93‑1 (MQ=255)
            aTCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGc                                                                              >  2:4387616/1‑93 (MQ=255)
             tCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCa                                                                             >  1:5621391/1‑93 (MQ=255)
             tCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCa                                                                             <  1:308036/93‑1 (MQ=255)
             tCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCa                                                                             >  1:3697515/1‑93 (MQ=255)
              cTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAg                                                                            <  2:3161121/93‑1 (MQ=255)
                 aCCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGa                                                                         >  1:5431808/1‑93 (MQ=255)
                 aCCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGa                                                                         <  2:7328308/93‑1 (MQ=255)
                  ccTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAg                                                                        >  2:287795/1‑93 (MQ=255)
                  ccTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAg                                                                        >  2:6721826/1‑93 (MQ=255)
                  ccTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAg                                                                        <  1:4347702/93‑1 (MQ=255)
                  ccTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAg                                                                        <  1:1907488/93‑1 (MQ=255)
                    tATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAggg                                                                      <  2:2663615/93‑1 (MQ=255)
                    tATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAggg                                                                      >  1:1005335/1‑93 (MQ=255)
                    tATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAggg                                                                      >  2:1971470/1‑93 (MQ=255)
                    tATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAggg                                                                      >  1:2933706/1‑93 (MQ=255)
                    tATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAggg                                                                      >  2:4197720/1‑93 (MQ=255)
                     aTTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGt                                                                     <  2:2598156/93‑1 (MQ=255)
                     aTTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGt                                                                     <  1:4498227/93‑1 (MQ=255)
                     aTTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCCGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGt                                                                     <  2:137161/93‑1 (MQ=255)
                       ttcattcaGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGa                                                                   <  1:6715141/93‑1 (MQ=255)
                       ttcattcaGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGa                                                                   <  1:5833461/93‑1 (MQ=255)
                       ttcattcaGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGa                                                                   >  2:3114281/1‑93 (MQ=255)
                       ttcattcaGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGa                                                                   <  2:5727521/93‑1 (MQ=255)
                         cattcaGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAgg                                                                 <  2:333465/93‑1 (MQ=255)
                         cattcaGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAgg                                                                 <  1:7260203/93‑1 (MQ=255)
                          attcaGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGc                                                                >  1:1786255/1‑93 (MQ=255)
                            tcaGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCaa                                                              <  1:4863838/93‑1 (MQ=255)
                              aGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGt                                                            <  1:4127152/93‑1 (MQ=255)
                              aGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGt                                                            >  1:6327636/1‑93 (MQ=255)
                                 cccGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAAt                                                         <  1:4651412/93‑1 (MQ=255)
                                  ccGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAAtt                                                        >  2:1163117/1‑93 (MQ=255)
                                   cGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTg                                                       <  1:794630/93‑1 (MQ=255)
                                    gTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGt                                                      <  2:6214331/93‑1 (MQ=255)
                                      cACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGttt                                                    <  1:7151379/93‑1 (MQ=255)
                                      cACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGttt                                                    <  1:12828/93‑1 (MQ=255)
                                       aCGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTc                                                   <  1:4175952/93‑1 (MQ=255)
                                       aCGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTc                                                   >  2:253958/1‑93 (MQ=255)
                                       aCGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTc                                                   >  1:2322608/1‑93 (MQ=255)
                                       aCGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTc                                                   <  2:1114648/93‑1 (MQ=255)
                                        cGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGACTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCa                                                  <  1:6218301/93‑1 (MQ=255)
                                         gCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCAt                                                 <  1:2914011/93‑1 (MQ=255)
                                          cAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATc                                                <  1:1497453/93‑1 (MQ=255)
                                          cAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATc                                                <  2:5633478/93‑1 (MQ=255)
                                            gTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGt                                              >  1:6113455/1‑93 (MQ=255)
                                            gTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGt                                              >  2:3061418/1‑93 (MQ=255)
                                             tCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTc                                             <  1:1634499/93‑1 (MQ=255)
                                              cAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCa                                            <  1:4722913/93‑1 (MQ=255)
                                               aGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAg                                           <  1:4451871/93‑1 (MQ=255)
                                               aGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAg                                           <  2:6059392/93‑1 (MQ=255)
                                                gCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGc                                          >  1:4635364/1‑93 (MQ=255)
                                                gCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGc                                          >  2:3777348/1‑93 (MQ=255)
                                                 cACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCt                                         >  2:6288081/1‑93 (MQ=255)
                                                 cACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCt                                         >  1:5999313/1‑93 (MQ=255)
                                                   cTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTcc                                       >  1:2080328/1‑93 (MQ=255)
                                                    tGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCa                                      <  2:4884314/93‑1 (MQ=255)
                                                    tGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCa                                      >  1:3799321/1‑93 (MQ=255)
                                                    tGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCa                                      <  2:4827362/93‑1 (MQ=255)
                                                      gCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCAtt                                    <  1:1415401/93‑1 (MQ=255)
                                                      gCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCAtt                                    <  1:6821218/93‑1 (MQ=255)
                                                       cGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCAttt                                   <  1:319899/93‑1 (MQ=255)
                                                        gAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCAtttt                                  >  1:3366555/1‑93 (MQ=255)
                                                        gAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCAtttt                                  <  1:3317259/93‑1 (MQ=255)
                                                         aaTTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCAttttt                                 >  1:2425454/1‑93 (MQ=255)
                                                            tCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGt                              <  2:2259474/93‑1 (MQ=255)
                                                            tCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGt                              >  2:6464058/1‑93 (MQ=255)
                                                             cTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGtt                             <  2:6555839/93‑1 (MQ=255)
                                                              tGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGttt                            >  1:1096812/1‑93 (MQ=255)
                                                               gCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTc                           <  1:2583828/93‑1 (MQ=255)
                                                               gCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTc                           >  1:2019826/1‑93 (MQ=255)
                                                                 aGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTccc                         <  1:3945132/93‑1 (MQ=255)
                                                                   aCTGTGCCGTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCca                       <  1:300687/93‑1 (MQ=255)
                                                                        gCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGt                  <  1:6587786/93‑1 (MQ=255)
                                                                            tGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCa              >  2:5515462/1‑93 (MQ=255)
                                                                            tGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCa              >  2:1470976/1‑93 (MQ=255)
                                                                             ggCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAg             <  2:1778869/93‑1 (MQ=255)
                                                                              gcgcTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAgg            >  2:4573189/1‑93 (MQ=255)
                                                                                  tCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCAt        <  1:7381557/93‑1 (MQ=255)
                                                                                  tCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCAt        >  1:6521495/1‑93 (MQ=255)
                                                                                  tCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCA‑TTTTCGTTTCCCCACATGTTGCAGGGCAtt       >  2:2396442/1‑93 (MQ=255)
                                                                                    gCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTc      <  2:5007517/93‑1 (MQ=255)
                                                                                    gCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTc      <  1:2745053/93‑1 (MQ=255)
                                                                                       ggATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCAt   >  2:5859371/1‑93 (MQ=255)
                                                                                       ggATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCAt   >  2:3726605/1‑93 (MQ=255)
                                                                                        gATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATc  <  2:1236984/93‑1 (MQ=255)
                                                                                        gATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATc  >  1:6136158/1‑93 (MQ=255)
                                                                                        gATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATc  <  2:7084875/93‑1 (MQ=255)
                                                                                           |                                                                                         
TTGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATC  >  NC_000913/4413737‑4413917

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TATTGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATCGCGG  >  NC_000913/4413735‑4413921
                                                                                              |                                                                                             
TATTGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATG                                                                                               >  SRR4302542.4604882/1‑94 (MQ=60)
TATTGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATG                                                                                               <  SRR4302542.803122/94‑1 (MQ=60)
TATTGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATG                                                                                               <  SRR4302542.1132116/94‑1 (MQ=60)
TATTGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATG                                                                                               >  SRR4302542.3416831/1‑94 (MQ=60)
TATTGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATG                                                                                               >  SRR4302542.5886515/1‑94 (MQ=60)
 ATTGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGGTGGCGCTCGCAGGATG                                                                                               >  SRR4302542.6229884/1‑94 (MQ=60)
  TTGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAG                                                                                             <  SRR4302542.5443053/94‑1 (MQ=60)
   TGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGT                                                                                            >  SRR4302542.301744/1‑94 (MQ=60)
   TGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGT                                                                                            >  SRR4302542.6460556/1‑94 (MQ=60)
   TGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGT                                                                                            <  SRR4302542.2562138/94‑1 (MQ=60)
    GCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATAAGTC                                                                                           >  SRR4302542.743881/1‑94 (MQ=60)
     CTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGTACTGGCGAATTCTGCAGACTGTGCC‑ATGGCGCTCGCAGGATGAGTCA                                                                                          <  SRR4302542.2689429/94‑1 (MQ=60)
     CTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCA                                                                                          <  SRR4302542.6103316/94‑1 (MQ=60)
     CTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCA                                                                                          >  SRR4302542.2697292/1‑94 (MQ=60)
       AACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACT                                                                                        >  SRR4302542.6593576/1‑94 (MQ=60)
       AACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGGGCC‑GTGGCGCTCGCAGGATGAGTCATT                                                                                        >  SRR4302542.2450791/1‑94 (MQ=60)
        ACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTA                                                                                       >  SRR4302542.3805359/1‑94 (MQ=60)
         CTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAA                                                                                      >  SRR4302542.1110355/1‑94 (MQ=60)
          TGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAAT                                                                                     <  SRR4302542.6196712/94‑1 (MQ=60)
          TGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAAT                                                                                     <  SRR4302542.7570124/94‑1 (MQ=60)
           GAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATT                                                                                    <  SRR4302542.2692726/94‑1 (MQ=60)
            AGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTG                                                                                   >  SRR4302542.5030175/1‑94 (MQ=60)
              ATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCA                                                                                 >  SRR4302542.5675998/1‑94 (MQ=60)
              ATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCA                                                                                 <  SRR4302542.1888489/94‑1 (MQ=60)
              ATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCA                                                                                 >  SRR4302542.4516360/1‑94 (MQ=60)
              ATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCA                                                                                 >  SRR4302542.3734098/1‑94 (MQ=60)
              ATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCA                                                                                 <  SRR4302542.1328821/94‑1 (MQ=60)
              ATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCA                                                                                 <  SRR4302542.1346815/94‑1 (MQ=60)
              ATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCA                                                                                 >  SRR4302542.4488736/1‑94 (MQ=60)
               TCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAG                                                                                <  SRR4302542.7261636/94‑1 (MQ=60)
               TCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAG                                                                                <  SRR4302542.310722/94‑1 (MQ=60)
                CTGACCTATTTCGTTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGC                                                                               <  SRR4302542.448807/94‑1 (MQ=60)
                CTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGC                                                                               >  SRR4302542.663851/1‑94 (MQ=60)
                 TGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCG                                                                              >  SRR4302542.6604037/1‑94 (MQ=60)
                 TGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCG                                                                              >  SRR4302542.1696361/1‑94 (MQ=60)
                  GACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGA                                                                             >  SRR4302542.5484592/1‑94 (MQ=60)
                  GACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGA                                                                             >  SRR4302542.6289733/1‑94 (MQ=60)
                  GACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGA                                                                             >  SRR4302542.4244350/1‑94 (MQ=60)
                    CCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGG                                                                           >  SRR4302542.4459910/1‑94 (MQ=60)
                    CCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGG                                                                           <  SRR4302542.4390410/94‑1 (MQ=60)
                    CCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGG                                                                           <  SRR4302542.1923971/94‑1 (MQ=60)
                     CTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGG                                                                          >  SRR4302542.1013993/1‑94 (MQ=60)
                     CTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGG                                                                          >  SRR4302542.2961807/1‑94 (MQ=60)
                     CTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGG                                                                          >  SRR4302542.495704/1‑94 (MQ=60)
                      TATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGT                                                                         <  SRR4302542.5955000/94‑1 (MQ=60)
                       ATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTG                                                                        <  SRR4302542.2052615/94‑1 (MQ=60)
                       ATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTG                                                                        >  SRR4302542.630229/1‑94 (MQ=60)
                       ATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTG                                                                        <  SRR4302542.1487383/94‑1 (MQ=60)
                       ATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTG                                                                        <  SRR4302542.4542349/94‑1 (MQ=60)
                       ATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTG                                                                        >  SRR4302542.1803086/1‑94 (MQ=60)
                        TTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGA                                                                       >  SRR4302542.1338362/1‑94 (MQ=60)
                        TTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGA                                                                       <  SRR4302542.2316026/94‑1 (MQ=60)
                        TTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGA                                                                       >  SRR4302542.2941/1‑94 (MQ=60)
                         TTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAG                                                                      <  SRR4302542.5890059/94‑1 (MQ=60)
                         TTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAG                                                                      <  SRR4302542.6781283/94‑1 (MQ=60)
                          TCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGG                                                                     <  SRR4302542.2406922/94‑1 (MQ=60)
                           CATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGC                                                                    <  SRR4302542.617906/94‑1 (MQ=60)
                           CATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGC                                                                    >  SRR4302542.3234645/1‑94 (MQ=60)
                           CATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGC                                                                    >  SRR4302542.1801754/1‑94 (MQ=60)
                           CATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGC                                                                    <  SRR4302542.7331379/94‑1 (MQ=60)
                            ATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCA                                                                   <  SRR4302542.2926898/94‑1 (MQ=60)
                            ATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCA                                                                   >  SRR4302542.5733130/1‑94 (MQ=60)
                            ATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCA                                                                   <  SRR4302542.6693476/94‑1 (MQ=60)
                            ATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCCCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCA                                                                   >  SRR4302542.1986986/1‑94 (MQ=60)
                              TCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAG                                                                 <  SRR4302542.4763652/94‑1 (MQ=60)
                              TCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAG                                                                 <  SRR4302542.6302571/94‑1 (MQ=60)
                              TCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAG                                                                 <  SRR4302542.1667643/94‑1 (MQ=60)
                              TCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAG                                                                 <  SRR4302542.4911197/94‑1 (MQ=60)
                               CAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGT                                                                >  SRR4302542.1904549/1‑94 (MQ=60)
                               CAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGT                                                                >  SRR4302542.2025052/1‑94 (MQ=60)
                               CAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGT                                                                >  SRR4302542.6389986/1‑94 (MQ=60)
                               CAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGT                                                                <  SRR4302542.3779394/94‑1 (MQ=60)
                                AGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTA                                                               >  SRR4302542.6447374/1‑94 (MQ=60)
                                AGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTA                                                               <  SRR4302542.318631/94‑1 (MQ=60)
                                AGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTA                                                               <  SRR4302542.4167806/94‑1 (MQ=60)
                                 GGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAA                                                              >  SRR4302542.6828862/1‑94 (MQ=60)
                                  GCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAAT                                                             <  SRR4302542.1909144/94‑1 (MQ=60)
                                   CCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATT                                                            >  SRR4302542.6463223/1‑94 (MQ=60)
                                   CCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATT                                                            <  SRR4302542.4696885/94‑1 (MQ=60)
                                   CCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATT                                                            <  SRR4302542.4696886/94‑1 (MQ=60)
                                   CCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATT                                                            >  SRR4302542.1022981/1‑94 (MQ=60)
                                    CCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTG                                                           <  SRR4302542.6727112/94‑1 (MQ=60)
                                    CCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTG                                                           >  SRR4302542.1449450/1‑94 (MQ=60)
                                    CCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTG                                                           >  SRR4302542.7100551/1‑94 (MQ=60)
                                    CCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTG                                                           <  SRR4302542.3845863/94‑1 (MQ=60)
                                    CCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTG                                                           <  SRR4302542.5571305/94‑1 (MQ=60)
                                     CGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGT                                                          <  SRR4302542.801471/94‑1 (MQ=60)
                                     CGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGT                                                          >  SRR4302542.3484408/1‑94 (MQ=60)
                                     CGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGT                                                          <  SRR4302542.2681303/94‑1 (MQ=60)
                                     CGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCCCGCAGGATGGGTCACTAATTGAACCGAGGGGGAGGCAAGTAATTGT                                                          >  SRR4302542.6435950/1‑94 (MQ=60)
                                       TCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTT                                                        >  SRR4302542.2761841/1‑94 (MQ=60)
                                       TCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTT                                                        <  SRR4302542.5920678/94‑1 (MQ=60)
                                       TCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTT                                                        <  SRR4302542.173560/94‑1 (MQ=60)
                                       TCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GGGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGA‑GCAAGTAATTGTTTC                                                       <  SRR4302542.6198482/94‑1 (MQ=60)
                                        CACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTC                                                       <  SRR4302542.3367710/94‑1 (MQ=60)
                                        CACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTC                                                       <  SRR4302542.7221542/94‑1 (MQ=60)
                                        CACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTC                                                       >  SRR4302542.2342522/1‑94 (MQ=60)
                                        CACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTC                                                       <  SRR4302542.12936/94‑1 (MQ=60)
                                        CACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTC                                                       <  SRR4302542.2960271/94‑1 (MQ=60)
                                         ACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCA                                                      <  SRR4302542.4217133/94‑1 (MQ=60)
                                         ACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCA                                                      <  SRR4302542.7147153/94‑1 (MQ=60)
                                          CGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCAT                                                     >  SRR4302542.5763440/1‑94 (MQ=60)
                                          CGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCAT                                                     <  SRR4302542.7405372/94‑1 (MQ=60)
                                          CGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGACTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCAT                                                     <  SRR4302542.6279547/94‑1 (MQ=60)
                                          CGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCAT                                                     >  SRR4302542.2017668/1‑94 (MQ=60)
                                          CGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCAT                                                     <  SRR4302542.2939352/94‑1 (MQ=60)
                                           GCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATC                                                    <  SRR4302542.2941961/94‑1 (MQ=60)
                                           GCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATC                                                    >  SRR4302542.2471213/1‑94 (MQ=60)
                                            CAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCG                                                   <  SRR4302542.1510406/94‑1 (MQ=60)
                                             AGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGT                                                  <  SRR4302542.4988234/94‑1 (MQ=60)
                                             AGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGT                                                  >  SRR4302542.602780/1‑94 (MQ=60)
                                             AGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGT                                                  >  SRR4302542.4188636/1‑94 (MQ=60)
                                             AGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGT                                                  >  SRR4302542.6172616/1‑94 (MQ=60)
                                             AGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGT                                                  >  SRR4302542.829/1‑94 (MQ=60)
                                              GTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTC                                                 >  SRR4302542.4184903/1‑94 (MQ=60)
                                              GTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTC                                                 >  SRR4302542.1079592/1‑94 (MQ=60)
                                               TCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCA                                                <  SRR4302542.1648629/94‑1 (MQ=60)
                                               TCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCA                                                <  SRR4302542.14120/94‑1 (MQ=60)
                                                CAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAG                                               <  SRR4302542.4768946/94‑1 (MQ=60)
                                                CAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAG                                               <  SRR4302542.4691887/94‑1 (MQ=60)
                                                 AGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGC                                              >  SRR4302542.4680657/1‑94 (MQ=60)
                                                 AGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGC                                              <  SRR4302542.4495538/94‑1 (MQ=60)
                                                  GCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCT                                             <  SRR4302542.4657123/94‑1 (MQ=60)
                                                  GCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCT                                             >  SRR4302542.6057418/1‑94 (MQ=60)
                                                   CACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTC                                            >  SRR4302542.6194485/1‑94 (MQ=60)
                                                    ACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCC                                           >  SRR4302542.2098293/1‑94 (MQ=60)
                                                    ACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCC                                           <  SRR4302542.4792190/94‑1 (MQ=60)
                                                     CTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCA                                          >  SRR4302542.3836929/1‑94 (MQ=60)
                                                     CTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCA                                          >  SRR4302542.4741161/1‑94 (MQ=60)
                                                      TGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCAT                                         <  SRR4302542.2085284/94‑1 (MQ=60)
                                                      TGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCAT                                         >  SRR4302542.5345868/1‑94 (MQ=60)
                                                        GCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTT                                       <  SRR4302542.1427633/94‑1 (MQ=60)
                                                        GCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTT                                       <  SRR4302542.464108/94‑1 (MQ=60)
                                                        GCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTT                                       <  SRR4302542.6888269/94‑1 (MQ=60)
                                                         CGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTT                                      >  SRR4302542.5111298/1‑94 (MQ=60)
                                                         CGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTT                                      >  SRR4302542.3398172/1‑94 (MQ=60)
                                                         CGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTT                                      <  SRR4302542.322675/94‑1 (MQ=60)
                                                          GAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTT                                     >  SRR4302542.2449046/1‑94 (MQ=60)
                                                          GAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTT                                     <  SRR4302542.4154080/94‑1 (MQ=60)
                                                          GAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTT                                     <  SRR4302542.3348513/94‑1 (MQ=60)
                                                          GAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTT                                     >  SRR4302542.7278456/1‑94 (MQ=60)
                                                           AATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTC                                    >  SRR4302542.3950333/1‑94 (MQ=60)
                                                            ATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCG                                   <  SRR4302542.4896360/94‑1 (MQ=60)
                                                             TTCTGCAGACTGTGCC‑GTGGCGCACGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGT                                  <  SRR4302542.3054672/94‑1 (MQ=60)
                                                               CTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTT                                <  SRR4302542.3581819/94‑1 (MQ=60)
                                                               CTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTT                                >  SRR4302542.1106207/1‑94 (MQ=60)
                                                               CTGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTT                                <  SRR4302542.5512846/94‑1 (MQ=60)
                                                                TGCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTC                               >  SRR4302542.2037295/1‑94 (MQ=60)
                                                                 GCAGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCC                              <  SRR4302542.2608860/94‑1 (MQ=60)
                                                                   AGACTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCC                            <  SRR4302542.3984094/94‑1 (MQ=60)
                                                                    GACGGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTTCATTTTTCGTTTCCCCA                           <  SRR4302542.6579887/94‑1 (MQ=60)
                                                                     ACTGTGCC‑GTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCAC                          <  SRR4302542.3316708/94‑1 (MQ=60)
                                                                     ACTGTGCC‑GTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCAC                          <  SRR4302542.303306/94‑1 (MQ=60)
                                                                      CTGTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACA                         >  SRR4302542.3986002/1‑94 (MQ=60)
                                                                       TGTGCC‑GTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACAT                        <  SRR4302542.3124567/94‑1 (MQ=60)
                                                                        GTGCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATG                       <  SRR4302542.3360520/94‑1 (MQ=60)
                                                                        GTGCC‑GTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATG                       <  SRR4302542.2901666/94‑1 (MQ=60)
                                                                          GCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTT                     <  SRR4302542.3990825/94‑1 (MQ=60)
                                                                          GCC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTT                     <  SRR4302542.6652692/94‑1 (MQ=60)
                                                                           CC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTG                    >  SRR4302542.2235654/1‑94 (MQ=60)
                                                                           CC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTG                    <  SRR4302542.1520237/94‑1 (MQ=60)
                                                                           CC‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTG                    <  SRR4302542.1542253/94‑1 (MQ=60)
                                                                            C‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGC                   >  SRR4302542.2994110/1‑94 (MQ=60)
                                                                            C‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGC                   >  SRR4302542.2356508/1‑94 (MQ=60)
                                                                            C‑GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGC                   >  SRR4302542.1829955/1‑94 (MQ=60)
                                                                              GTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCA                  >  SRR4302542.4510967/1‑94 (MQ=60)
                                                                                    CTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCAT            >  SRR4302542.3098642/1‑94 (MQ=60)
                                                                                    CTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCAT            >  SRR4302542.6585757/1‑94 (MQ=60)
                                                                                    CTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCAT            >  SRR4302542.5220121/1‑94 (MQ=60)
                                                                                     TCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATT           <  SRR4302542.678130/94‑1 (MQ=60)
                                                                                     TCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATT           <  SRR4302542.7453829/94‑1 (MQ=60)
                                                                                      CGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTC          <  SRR4302542.7138494/94‑1 (MQ=60)
                                                                                       GCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCC         <  SRR4302542.2771518/94‑1 (MQ=60)
                                                                                       GCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCC         >  SRR4302542.1375098/1‑94 (MQ=60)
                                                                                        CAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCA        >  SRR4302542.4284437/1‑94 (MQ=60)
                                                                                        CAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCA        <  SRR4302542.6134741/94‑1 (MQ=60)
                                                                                        CAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCA        >  SRR4302542.1108027/1‑94 (MQ=60)
                                                                                         AGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCAT       >  SRR4302542.3076154/1‑94 (MQ=60)
                                                                                         AGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCAT       >  SRR4302542.3456939/1‑94 (MQ=60)
                                                                                         AGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCAT       >  SRR4302542.4704764/1‑94 (MQ=60)
                                                                                         AGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCAT       >  SRR4302542.7480453/1‑94 (MQ=60)
                                                                                          GGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATC      >  SRR4302542.6195525/1‑94 (MQ=60)
                                                                                           GATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATCG     <  SRR4302542.1407392/94‑1 (MQ=60)
                                                                                            ATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATCGC    <  SRR4302542.6419133/94‑1 (MQ=60)
                                                                                            ATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATCGC    <  SRR4302542.3585179/94‑1 (MQ=60)
                                                                                             TGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATCGCG   >  SRR4302542.3327639/1‑94 (MQ=60)
                                                                                              GAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATCGCGG  >  SRR4302542.7274268/1‑94 (MQ=60)
                                                                                              |                                                                                             
TATTGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCC‑GTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATCGCGG  >  NC_000913/4413735‑4413921

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑