Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,422,664 |
A→G |
intergenic (‑295/‑32) |
yjfY ← / → rpsF |
hypothetical protein/30S ribosomal subunit protein S6 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,422,664 | 0 | A | G | 87.5%
| 756.9
/ 90.3
| 303 | intergenic (‑295/‑32) | yjfY/rpsF | hypothetical protein/30S ribosomal subunit protein S6 |
| Reads supporting (aligned to +/- strand): ref base A (15/23); new base G (117/148); total (132/171) |
| Fisher's exact test for biased strand distribution p-value = 6.05e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.50e-01 |
Only 100 of 319 total aligned reads displayed.
AGTTTAGCGAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAGGTTCCGGGCA > NC_000913/4422572‑4422756
|
tttAGCGAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACggg > 2:2903043/1‑93 (MQ=255)
tttAGCGAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACggg < 1:370769/93‑1 (MQ=255)
ttAGCGAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACggga < 1:6824271/93‑1 (MQ=255)
gCGAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGc > 2:7023190/1‑93 (MQ=255)
gCGAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGc < 2:475502/93‑1 (MQ=255)
cGAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCt < 2:5849310/93‑1 (MQ=255)
cGAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCt > 1:3190124/1‑93 (MQ=255)
gAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTg > 2:117490/1‑93 (MQ=255)
gCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGaat > 1:6013940/1‑93 (MQ=255)
cATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGaata > 2:2834239/1‑93 (MQ=255)
cATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGaata > 2:5741075/1‑93 (MQ=255)
tACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGaataat > 1:1417017/1‑93 (MQ=255)
tACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGaataat > 2:1203809/1‑93 (MQ=255)
aCAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATc < 1:2585969/93‑1 (MQ=255)
aaGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCg < 2:3497017/93‑1 (MQ=255)
aGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGt < 1:6997751/93‑1 (MQ=255)
aGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGt < 1:932445/93‑1 (MQ=255)
gTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTa > 2:3341125/1‑93 (MQ=255)
gTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTa > 2:1621768/1‑93 (MQ=255)
gTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTa < 1:1937057/93‑1 (MQ=255)
gTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTa < 2:1340401/93‑1 (MQ=255)
gTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTa < 1:4932348/93‑1 (MQ=255)
gTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTa < 2:3084568/93‑1 (MQ=255)
aCTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAg < 1:1576559/93‑1 (MQ=255)
tataACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGa < 2:1577410/93‑1 (MQ=255)
taACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGc > 2:5914031/1‑93 (MQ=255)
taACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGc < 2:6494265/93‑1 (MQ=255)
aCGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCaa < 1:1241522/93‑1 (MQ=255)
aCGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCaa > 1:4375864/1‑93 (MQ=255)
aCGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCaa < 1:6117014/93‑1 (MQ=255)
aCGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCaa < 2:2295162/93‑1 (MQ=255)
cgTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTc < 2:7406161/93‑1 (MQ=255)
tCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGa < 2:3630160/93‑1 (MQ=255)
tCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGa > 1:3299626/1‑93 (MQ=255)
cATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGAt > 2:3589569/1‑93 (MQ=255)
aTTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATg > 2:6368605/1‑93 (MQ=255)
aTTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATg < 2:470582/93‑1 (MQ=255)
tttttCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGc > 2:1053701/1‑93 (MQ=255)
tttttCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGc > 2:2438076/1‑93 (MQ=255)
ttttCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCg < 1:1325269/93‑1 (MQ=255)
tCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCa > 2:1416995/1‑93 (MQ=255)
aGCCGTTCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCAtt < 2:4635849/93‑1 (MQ=255)
gCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTa > 1:7391421/1‑93 (MQ=255)
gCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTa > 2:3392025/1‑93 (MQ=255)
gCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTa > 2:683321/1‑93 (MQ=255)
cGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACg > 2:6574866/1‑93 (MQ=255)
ccTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGaaa > 2:5596825/1‑93 (MQ=255)
ccTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGaaa < 2:1079168/93‑1 (MQ=255)
cTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAAt < 1:4788006/93‑1 (MQ=255)
tttAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATc > 1:6185690/1‑93 (MQ=255)
tttAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATc < 1:7029927/93‑1 (MQ=255)
tttAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATc > 1:2507050/1‑93 (MQ=255)
ttAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCg < 1:5215357/93‑1 (MQ=255)
ttAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCg < 1:2888910/93‑1 (MQ=255)
tAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGt < 1:5327544/93‑1 (MQ=255)
aaCACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGtt < 2:4075252/93‑1 (MQ=255)
aaCACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGtt < 2:7455781/93‑1 (MQ=255)
aaCACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGtt < 1:6484798/93‑1 (MQ=255)
aaCACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGtt < 1:4493513/93‑1 (MQ=255)
aaCACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGtt > 1:6287882/1‑93 (MQ=255)
acacGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGttt > 2:5509732/1‑93 (MQ=255)
acacGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGttt < 2:5171898/93‑1 (MQ=255)
cacGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGtttt > 1:3519341/1‑93 (MQ=255)
acGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGttttt < 1:1751803/93‑1 (MQ=255)
cGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTa < 1:2079183/93‑1 (MQ=255)
ttCCTTGCCTCCCCGGGATTTGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTAGATGCGTCATTACGAAATCGTTTTTATg > 1:3954594/1‑93 (MQ=255)
ttCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATg < 1:4235563/93‑1 (MQ=255)
ttCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATg > 2:3842172/1‑93 (MQ=255)
ccTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGt > 2:7345515/1‑93 (MQ=255)
ccTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGt < 2:5642892/93‑1 (MQ=255)
cTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTc < 1:1005942/93‑1 (MQ=255)
cTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTc < 1:563751/93‑1 (MQ=255)
ttGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTcc > 1:1672869/1‑93 (MQ=255)
ttGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTcc < 2:7173128/93‑1 (MQ=255)
ccTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATc < 1:5985979/93‑1 (MQ=255)
tCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCt < 1:5603526/93‑1 (MQ=255)
cccGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGa > 2:5280294/1‑93 (MQ=255)
cccGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGa < 1:7088351/93‑1 (MQ=255)
ccGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGAc > 2:6208411/1‑93 (MQ=255)
ccGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGAc > 1:2700622/1‑93 (MQ=255)
gggATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTATGAAATCGTTTTTATGGTCCATACTGACCa > 1:6532382/1‑93 (MQ=255)
gggATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCa > 2:4244538/1‑93 (MQ=255)
ggATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCag > 2:6871885/1‑93 (MQ=255)
gATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCaga > 2:5933404/1‑93 (MQ=255)
gATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCaga > 1:4667102/1‑93 (MQ=255)
aTTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCagag < 2:1800163/93‑1 (MQ=255)
aTTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCagag < 2:6671989/93‑1 (MQ=255)
ttCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGc > 1:5887433/1‑93 (MQ=255)
ttCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCATCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGc < 2:4525566/93‑1 (MQ=255)
gCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAAc > 1:5111668/1‑93 (MQ=255)
cTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACa < 1:4538030/93‑1 (MQ=255)
cTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACa < 1:1451798/93‑1 (MQ=255)
cTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACa < 2:4035614/93‑1 (MQ=255)
tGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAg > 2:414502/1‑93 (MQ=255)
aCCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAGGt < 1:6335772/93‑1 (MQ=255)
aCCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAGGt < 1:2250837/93‑1 (MQ=255)
aCCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAGGt > 1:4957013/1‑93 (MQ=255)
aCCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAGGt > 1:1147755/1‑93 (MQ=255)
cccAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAGGtt < 2:2098874/93‑1 (MQ=255)
gACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAGGTTCCgg < 2:2763610/93‑1 (MQ=255)
|
AGTTTAGCGAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAGGTTCCGGGCA > NC_000913/4422572‑4422756
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GAGTTTAGCGAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAGGTTCCGGGCAT > NC_000913/4422571‑4422757
|
GAGTTTAGCGAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACG < SRR4302542.2680978/94‑1 (MQ=60)
GAGTTTAGCGAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACG < SRR4302542.5999402/94‑1 (MQ=60)
GAGTTTAGCGAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACG < SRR4302542.4701267/94‑1 (MQ=60)
GAGTTTAGCGAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACA < SRR4302542.3943889/94‑1 (MQ=60)
AGTTTAGCGAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGG < SRR4302542.2265976/94‑1 (MQ=60)
TTTAGCGAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGA < SRR4302542.6468672/94‑1 (MQ=60)
TTTAGCGAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGA < SRR4302542.374002/94‑1 (MQ=60)
TTAGCGAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAG < SRR4302542.617008/94‑1 (MQ=60)
TTAGCGAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAG < SRR4302542.6891344/94‑1 (MQ=60)
TTAGCGAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAG < SRR4302542.6958662/94‑1 (MQ=60)
TTAGCGAGGCATACAAATACTATAACGCGGTCTTTTTTAGCCCGCCTTTAACCCGTTCCTTGCCCCCCCGGGATTCGGCTGACCCAGACGGGAG < SRR4302542.3209408/94‑1 (MQ=42)
TAGCGAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGG < SRR4302542.6385340/94‑1 (MQ=60)
GCGAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCT > SRR4302542.3220336/1‑94 (MQ=60)
GGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAAT > SRR4302542.105670/1‑94 (MQ=60)
GGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAAT > SRR4302542.7135921/1‑94 (MQ=60)
GGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAAT > SRR4302542.6072177/1‑94 (MQ=60)
GGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAAT > SRR4302542.6743650/1‑94 (MQ=60)
GCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATA > SRR4302542.6952203/1‑94 (MQ=60)
CATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAA < SRR4302542.5080844/94‑1 (MQ=60)
CATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAA < SRR4302542.4057278/94‑1 (MQ=60)
CATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAA > SRR4302542.5667206/1‑94 (MQ=60)
CATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTAACCCAGACGGGAGGCTGAATAA < SRR4302542.7109300/94‑1 (MQ=60)
ATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATANN > SRR4302542.3047184/1‑94 (MQ=60)
ATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAAT < SRR4302542.6059318/94‑1 (MQ=60)
ATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAAT > SRR4302542.1429284/1‑94 (MQ=60)
TACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATC < SRR4302542.6150183/94‑1 (MQ=60)
TACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATC < SRR4302542.1194382/94‑1 (MQ=60)
ACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCC > SRR4302542.4772218/1‑94 (MQ=60)
ACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCC < SRR4302542.2611024/94‑1 (MQ=60)
ACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCC < SRR4302542.2141824/94‑1 (MQ=60)
ACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCC > SRR4302542.4861653/1‑94 (MQ=60)
CAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGCCGGGAGGCTGAATAATCCG > SRR4302542.4981257/1‑94 (MQ=60)
CAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCG < SRR4302542.4699828/94‑1 (MQ=60)
AGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTA < SRR4302542.940467/94‑1 (MQ=60)
AGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTA < SRR4302542.7066493/94‑1 (MQ=60)
GTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAA > SRR4302542.7098738/1‑94 (MQ=60)
GTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAA < SRR4302542.4980299/94‑1 (MQ=60)
GTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAA < SRR4302542.1953776/94‑1 (MQ=60)
TACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAG > SRR4302542.1544472/1‑94 (MQ=60)
ACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGG < SRR4302542.1590172/94‑1 (MQ=60)
TATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAG < SRR4302542.1579054/94‑1 (MQ=60)
TATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAG < SRR4302542.3969605/94‑1 (MQ=60)
ATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGC > SRR4302542.198207/1‑94 (MQ=60)
ATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGC > SRR4302542.5990867/1‑94 (MQ=60)
TAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCA < SRR4302542.5345067/94‑1 (MQ=60)
AACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAA > SRR4302542.4418817/1‑94 (MQ=60)
AACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAA > SRR4302542.6333267/1‑94 (MQ=60)
AACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAA < SRR4302542.6193938/94‑1 (MQ=60)
ACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAAT < SRR4302542.1296804/94‑1 (MQ=60)
ACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAAT < SRR4302542.1252193/94‑1 (MQ=60)
ACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAAT < SRR4302542.6176208/94‑1 (MQ=60)
CGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATT < SRR4302542.578376/94‑1 (MQ=60)
GCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTC < SRR4302542.1956033/94‑1 (MQ=60)
GCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTC < SRR4302542.4562214/94‑1 (MQ=60)
CGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCG > SRR4302542.3722237/1‑94 (MQ=60)
CGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCG > SRR4302542.6055616/1‑94 (MQ=60)
GTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGA > SRR4302542.3330756/1‑94 (MQ=60)
TCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGAT < SRR4302542.1436761/94‑1 (MQ=60)
TCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGAT < SRR4302542.3289733/94‑1 (MQ=60)
TCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGAT < SRR4302542.378410/94‑1 (MQ=60)
CATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATG < SRR4302542.476466/94‑1 (MQ=60)
CATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATG > SRR4302542.2146179/1‑94 (MQ=60)
TTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCG < SRR4302542.6583995/94‑1 (MQ=60)
TTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCG < SRR4302542.2785954/94‑1 (MQ=60)
TTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGT < SRR4302542.1336685/94‑1 (MQ=60)
TTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCA < SRR4302542.547614/94‑1 (MQ=60)
TTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCA > SRR4302542.1285663/1‑94 (MQ=60)
CAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATT < SRR4302542.4878032/94‑1 (MQ=60)
CAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATT < SRR4302542.822880/94‑1 (MQ=60)
AGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTA > SRR4302542.7463768/1‑94 (MQ=60)
GCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTAC > SRR4302542.1091452/1‑94 (MQ=60)
GCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTAC < SRR4302542.2675961/94‑1 (MQ=60)
CCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACG < SRR4302542.6081094/94‑1 (MQ=60)
CGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGA > SRR4302542.1900955/1‑94 (MQ=60)
GACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAA > SRR4302542.5111990/1‑94 (MQ=60)
GACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAA < SRR4302542.3520971/94‑1 (MQ=60)
GACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAA > SRR4302542.6696116/1‑94 (MQ=60)
ACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAA < SRR4302542.4537122/94‑1 (MQ=60)
ACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAA < SRR4302542.6011917/94‑1 (MQ=60)
CCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAAT > SRR4302542.5560833/1‑94 (MQ=60)
CTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATC > SRR4302542.4444698/1‑94 (MQ=60)
CTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATC > SRR4302542.6245739/1‑94 (MQ=60)
CTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATC > SRR4302542.2531384/1‑94 (MQ=60)
CTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATC < SRR4302542.7095760/94‑1 (MQ=60)
CTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATC < SRR4302542.4834672/94‑1 (MQ=60)
TTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCG < SRR4302542.7098999/94‑1 (MQ=60)
TTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCG > SRR4302542.6594846/1‑94 (MQ=60)
TTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGT < SRR4302542.5266074/94‑1 (MQ=60)
TTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGT < SRR4302542.2916650/94‑1 (MQ=60)
TAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTT < SRR4302542.5379305/94‑1 (MQ=60)
TAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTT > SRR4302542.6349839/1‑94 (MQ=60)
TAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTT > SRR4302542.3232909/1‑94 (MQ=60)
AACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTT < SRR4302542.6548696/94‑1 (MQ=60)
AACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTT < SRR4302542.4537596/94‑1 (MQ=60)
ACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTT < SRR4302542.7496942/94‑1 (MQ=60)
ACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTT < SRR4302542.2621602/94‑1 (MQ=60)
ACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTT > SRR4302542.3552238/1‑94 (MQ=60)
CACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTT < SRR4302542.5253891/94‑1 (MQ=60)
CACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTT < SRR4302542.7412610/94‑1 (MQ=60)
ACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTA < SRR4302542.1767014/94‑1 (MQ=60)
CGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTAT > SRR4302542.634630/1‑94 (MQ=60)
CGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTAT < SRR4302542.74483/94‑1 (MQ=60)
CGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTAT > SRR4302542.2804014/1‑94 (MQ=60)
CGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTAT < SRR4302542.2097137/94‑1 (MQ=60)
GTTCCTTGCCTCCCCGGGATTTGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTAGATGCGTCATTACGAAATCGTTTTTATG > SRR4302542.3993635/1‑94 (MQ=60)
GTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATG > SRR4302542.1648479/1‑94 (MQ=60)
GTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATG < SRR4302542.5256724/94‑1 (MQ=60)
GTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATG < SRR4302542.1385201/94‑1 (MQ=60)
GTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATG < SRR4302542.2601442/94‑1 (MQ=60)
GTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATG > SRR4302542.497826/1‑94 (MQ=60)
TTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGG < SRR4302542.4585719/94‑1 (MQ=60)
TTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGG > SRR4302542.1590499/1‑94 (MQ=60)
TTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGG < SRR4302542.4277274/94‑1 (MQ=60)
TTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGG < SRR4302542.4277273/94‑1 (MQ=60)
CCTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTC < SRR4302542.1380221/94‑1 (MQ=60)
CTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCC > SRR4302542.1687329/1‑94 (MQ=60)
CTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCC < SRR4302542.568606/94‑1 (MQ=60)
CTTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCC < SRR4302542.1014607/94‑1 (MQ=60)
TTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCA < SRR4302542.4308970/94‑1 (MQ=60)
TTGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCA < SRR4302542.4080095/94‑1 (MQ=60)
TGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCAT > SRR4302542.5362431/1‑94 (MQ=60)
TGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCAT < SRR4302542.6171955/94‑1 (MQ=60)
TGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCAT > SRR4302542.5592372/1‑94 (MQ=60)
TGCCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCAT < SRR4302542.2607850/94‑1 (MQ=60)
CCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCC < SRR4302542.6043964/94‑1 (MQ=60)
CCTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCC < SRR4302542.4565650/94‑1 (MQ=60)
CTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCT < SRR4302542.5686653/94‑1 (MQ=60)
CTCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCT > SRR4302542.3519432/1‑94 (MQ=60)
CTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCT < SRR4302542.3122880/94‑1 (MQ=60)
TCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTG < SRR4302542.4865358/94‑1 (MQ=60)
TCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTG < SRR4302542.35880/94‑1 (MQ=60)
TCCCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTG < SRR4302542.5657965/94‑1 (MQ=60)
CCCGGGATTCGGCTGACCCCGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGCC > SRR4302542.1520984/1‑94 (MQ=60)
CCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGAC > SRR4302542.1804017/1‑94 (MQ=60)
CCCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGAC > SRR4302542.2726674/1‑94 (MQ=60)
CCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGAC < SRR4302542.7157902/94‑1 (MQ=60)
CCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACC > SRR4302542.4377156/1‑94 (MQ=60)
CCGGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACC < SRR4302542.2521698/94‑1 (MQ=60)
CGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTATGAAATCGTTTTTATGGTCCATACTGACCA > SRR4302542.6596768/1‑94 (MQ=60)
GGGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAG < SRR4302542.143662/94‑1 (MQ=60)
GGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGA < SRR4302542.1223552/94‑1 (MQ=60)
GGATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGA > SRR4302542.4712724/1‑94 (MQ=60)
ATTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGC > SRR4302542.5944491/1‑94 (MQ=60)
TTCGGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCG < SRR4302542.2103529/94‑1 (MQ=60)
TTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCG < SRR4302542.1737237/94‑1 (MQ=60)
GGCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAAC > SRR4302542.5161313/1‑94 (MQ=60)
GCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACA < SRR4302542.6829913/94‑1 (MQ=60)
GCTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACA > SRR4302542.1700823/1‑94 (MQ=60)
CTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAG < SRR4302542.1464326/94‑1 (MQ=60)
CTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAG > SRR4302542.7499428/1‑94 (MQ=60)
CTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAG < SRR4302542.979812/94‑1 (MQ=60)
CTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAG < SRR4302542.6291070/94‑1 (MQ=60)
CTGACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAG < SRR4302542.4582464/94‑1 (MQ=60)
GACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAGGT < SRR4302542.2275988/94‑1 (MQ=60)
GACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAGGT > SRR4302542.5005170/1‑94 (MQ=60)
GACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAGGT > SRR4302542.1157586/1‑94 (MQ=60)
ACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAGGTT < SRR4302542.2270197/94‑1 (MQ=60)
ACCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAGGTT < SRR4302542.6398193/94‑1 (MQ=60)
CCCAGACGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAGGTTC > SRR4302542.5781856/1‑94 (MQ=60)
CAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAGGTTCCG > SRR4302542.6528110/1‑94 (MQ=60)
CGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAGGTTCCGGGCA > SRR4302542.6422150/1‑94 (MQ=60)
CGGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAGGTTCCGGGCA < SRR4302542.5853705/94‑1 (MQ=60)
GGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAGGTTCCGGGCAT > SRR4302542.2324277/1‑94 (MQ=60)
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GAGTTTAGCGAGGCATACAAGTACTATAACGCGTCATTTTTCAGCCGACCTTTAACACGTTCCTTGCCTCCCCGGGATTCGGCTGACCCAGACAGGAGGCTGAATAATCCGTAAGGAGCAATTCGATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAGGTTCCGGGCAT > NC_000913/4422571‑4422757
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
