Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,424,677 A→G G108G (GGT→GGC)  yjfZ ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,424,6770AG84.6% 669.8 / 114.8 293G108G (GGT→GGC) yjfZhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (27/18);  new base G (125/123);  total (152/141)
Fisher's exact test for biased strand distribution p-value = 2.59e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.94e-01

Only 100 of 301 total aligned reads displayed.

CCCAAAACCACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCATTGTGAT  >  NC_000913/4424585‑4424769
                                                                                            |                                                                                            
cccAAAACCACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCa                                                                                              >  1:1266124/1‑93 (MQ=255)
 ccAAAACCACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCAc                                                                                             >  2:3365026/1‑93 (MQ=255)
  cAAACCCACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATTTTTCAGTTCTGCGGTTAACCTCGCAcc                                                                                            <  1:7478719/93‑1 (MQ=255)
  cAAAACCACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGcc                                                                                            <  2:3941682/93‑1 (MQ=255)
   aaaaCCACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGccc                                                                                           >  2:7000183/1‑93 (MQ=255)
    aaaCCACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCcg                                                                                          >  2:6324841/1‑93 (MQ=255)
        cACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGCTCTGCGGTTAACCTCGCGCCCGCGTa                                                                                      >  2:5436386/1‑93 (MQ=255)
         aCTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTaa                                                                                     >  2:7497299/1‑93 (MQ=255)
         aCTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTaa                                                                                     <  2:2737196/93‑1 (MQ=255)
         aCTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTaa                                                                                     <  1:6010530/93‑1 (MQ=255)
            tCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCt                                                                                  <  1:817596/93‑1 (MQ=255)
              gtgtattgtgtattTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCttt                                                                                >  1:7302652/1‑93 (MQ=255)
              gtgtattgtgtattTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCttt                                                                                >  1:3810639/1‑93 (MQ=255)
               tgtattgtgtattTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTa                                                                               <  2:4345277/93‑1 (MQ=255)
               tgtattgtgtattTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTa                                                                               >  2:2968995/1‑93 (MQ=255)
                gtattgtgtattTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTAt                                                                              >  1:5082697/1‑93 (MQ=255)
                 tattgtgtattTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTAtt                                                                             <  2:6561875/93‑1 (MQ=255)
                 tattgtgtattTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTAtt                                                                             <  2:4142891/93‑1 (MQ=255)
                 tattgtgtattTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTAtt                                                                             <  2:2004830/93‑1 (MQ=255)
                 tattgtgtattTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTAtt                                                                             >  1:39881/1‑93 (MQ=255)
                  attgtgtattTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTg                                                                            >  1:4111941/1‑93 (MQ=255)
                   ttgtgtattTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGt                                                                           <  2:4120773/93‑1 (MQ=255)
                   ttgtgtattTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGt                                                                           >  1:5555149/1‑93 (MQ=255)
                    tgtgtattTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTa                                                                          <  1:6530823/93‑1 (MQ=255)
                    tgtgtattTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTa                                                                          >  2:4553830/1‑93 (MQ=255)
                    tgtgtattTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTa                                                                          <  2:1458910/93‑1 (MQ=255)
                     gtgtattTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTAt                                                                         >  1:4561032/1‑93 (MQ=255)
                      tgtattTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTAtt                                                                        >  2:4517702/1‑93 (MQ=255)
                       gtattTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTAttt                                                                       >  2:5132083/1‑93 (MQ=255)
                        tattTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTc                                                                      <  2:4013509/93‑1 (MQ=255)
                         attTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCt                                                                     >  1:7255420/1‑93 (MQ=255)
                         attTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCt                                                                     >  2:5281621/1‑93 (MQ=255)
                         attTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTCt                                                                     >  2:3253083/1‑93 (MQ=255)
                          tttACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTg                                                                    <  1:1887445/93‑1 (MQ=255)
                           ttACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTgg                                                                   <  1:3437017/93‑1 (MQ=255)
                           ttACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTgg                                                                   <  1:3345192/93‑1 (MQ=255)
                           ttACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTgg                                                                   <  2:7388362/93‑1 (MQ=255)
                           ttACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTgg                                                                   <  1:6657868/93‑1 (MQ=255)
                             aCTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGc                                                                 >  1:2440454/1‑93 (MQ=255)
                             aCTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGc                                                                 >  1:5248401/1‑93 (MQ=255)
                                 ttGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGa                                                             <  2:6775959/93‑1 (MQ=255)
                                  tGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGaa                                                            <  2:3551983/93‑1 (MQ=255)
                                    ggTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAata                                                          <  1:1570253/93‑1 (MQ=255)
                                      ttCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAAtatt                                                        >  2:4228814/1‑93 (MQ=255)
                                       tCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAAtatta                                                       >  1:3200535/1‑93 (MQ=255)
                                        cGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAAtattat                                                      <  1:4878077/93‑1 (MQ=255)
                                        cGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAAtattat                                                      >  2:1268014/1‑93 (MQ=255)
                                         gAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATc                                                     >  1:6355624/1‑93 (MQ=255)
                                          aaGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCt                                                    <  2:3680271/93‑1 (MQ=255)
                                            ggATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTaa                                                  <  1:4309671/93‑1 (MQ=255)
                                                tCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTa                                              <  2:7099100/93‑1 (MQ=255)
                                                tCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTa                                              <  1:779190/93‑1 (MQ=255)
                                                 cGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAg                                             >  1:5845733/1‑93 (MQ=255)
                                                 cGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCGCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAg                                             >  1:6222295/1‑93 (MQ=255)
                                                   aCATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCt                                           >  2:6931198/1‑93 (MQ=255)
                                                     aTCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTc                                         >  1:3382176/1‑93 (MQ=255)
                                                     aTCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTc                                         >  1:6716999/1‑93 (MQ=255)
                                                      tCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCa                                        >  2:374906/1‑93 (MQ=255)
                                                      tCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCa                                        <  1:7167572/93‑1 (MQ=255)
                                                       cTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCAt                                       <  1:4766782/93‑1 (MQ=255)
                                                        ttGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATg                                      >  2:5859024/1‑93 (MQ=255)
                                                        ttGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATg                                      <  1:7290233/93‑1 (MQ=255)
                                                         tGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATgg                                     <  1:6892766/93‑1 (MQ=255)
                                                          gCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGt                                    <  1:2742184/93‑1 (MQ=255)
                                                           cAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGtt                                   >  2:4899255/1‑93 (MQ=255)
                                                            aataaataTTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTtc                                  >  1:890261/1‑93 (MQ=255)
                                                              taaataTTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTtcca                                <  1:2056634/93‑1 (MQ=255)
                                                              taaataTTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTtcca                                <  1:166884/93‑1 (MQ=255)
                                                              taaataTTTCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTtcca                                >  2:6660815/1‑93 (MQ=255)
                                                                aataTTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTtccatc                              >  2:6886482/1‑93 (MQ=255)
                                                                 atatTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTtccatcc                             <  1:7100226/93‑1 (MQ=255)
                                                                  tatTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTtccatcca                            >  1:741493/1‑93 (MQ=255)
                                                                   atTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCaa                           <  1:2569875/93‑1 (MQ=255)
                                                                   atTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCaa                           <  1:3059799/93‑1 (MQ=255)
                                                                    tttCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCaaa                          >  2:1802789/1‑93 (MQ=255)
                                                                     ttCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCaaaa                         <  2:1674581/93‑1 (MQ=255)
                                                                      tCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAg                        >  1:6441638/1‑93 (MQ=255)
                                                                      tCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAg                        >  1:3715047/1‑93 (MQ=255)
                                                                        aGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGaa                      <  1:2214047/93‑1 (MQ=255)
                                                                         gTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAAt                     >  1:986432/1‑93 (MQ=255)
                                                                          ttCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAAtt                    >  1:3228146/1‑93 (MQ=255)
                                                                          ttCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAAtt                    <  1:2161627/93‑1 (MQ=255)
                                                                          ttCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAAtt                    <  2:2482761/93‑1 (MQ=255)
                                                                            cTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTAt                  >  2:3431876/1‑93 (MQ=255)
                                                                              gCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCa                >  2:3822154/1‑93 (MQ=255)
                                                                               cGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCAc               <  1:1113112/93‑1 (MQ=255)
                                                                                ggTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCAcc              <  2:114858/93‑1 (MQ=255)
                                                                                ggTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCAcc              >  2:6012256/1‑93 (MQ=255)
                                                                                 gTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACca             >  2:2153826/1‑93 (MQ=255)
                                                                                    aaCCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACcattc          <  1:2331665/93‑1 (MQ=255)
                                                                                     aCCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACcattca         >  1:5019211/1‑93 (MQ=255)
                                                                                      ccTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACcattcat        >  2:924536/1‑93 (MQ=255)
                                                                                      ccTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACcattcat        <  2:7151077/93‑1 (MQ=255)
                                                                                      ccTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACcattcat        >  1:2960629/1‑93 (MQ=255)
                                                                                        tCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCATtg      >  1:699277/1‑93 (MQ=255)
                                                                                        tCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCATtg      >  1:3776221/1‑93 (MQ=255)
                                                                                         cgcgCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCATtgt     <  2:6169681/93‑1 (MQ=255)
                                                                                         cgcgCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCATtgt     <  1:5704312/93‑1 (MQ=255)
                                                                                         cgcgCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCATtgt     <  2:5678801/93‑1 (MQ=255)
                                                                                            aCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCATTGTGAt  >  2:1884108/1‑93 (MQ=255)
                                                                                            |                                                                                            
CCCAAAACCACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCATTGTGAT  >  NC_000913/4424585‑4424769

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TCCCAAAACCACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCATTGTGATT  >  NC_000913/4424584‑4424770
                                                                                             |                                                                                             
TCCCAAAACCACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCA                                                                                               >  SRR4302542.1277004/1‑94 (MQ=60)
 CCCAAAACCACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGC                                                                                              >  SRR4302542.5001740/1‑94 (MQ=60)
 CCCAAAACCACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGC                                                                                              >  SRR4302542.4057679/1‑94 (MQ=60)
 CCCAAAACCACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGC                                                                                              >  SRR4302542.7591185/1‑94 (MQ=60)
 CCCAAAACCACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGC                                                                                              >  SRR4302542.2921971/1‑94 (MQ=60)
 CCCAAAACCACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCCGCGGTTAACCTCGCAC                                                                                              <  SRR4302542.3529225/94‑1 (MQ=60)
  CCAAAACCACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCC                                                                                             >  SRR4302542.4994042/1‑94 (MQ=60)
   CAAACCCACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATTTTTCAGTTCTGCGGTTAACCTCGCACCC                                                                                            <  SRR4302542.7552020/94‑1 (MQ=60)
   CAAAACCACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCC                                                                                            <  SRR4302542.7514730/94‑1 (MQ=60)
       ACCACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCACCCGCGT                                                                                        >  SRR4302542.1685353/1‑94 (MQ=60)
        CCACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTA                                                                                       >  SRR4302542.984537/1‑94 (MQ=60)
         CACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAA                                                                                      <  SRR4302542.3784984/94‑1 (MQ=60)
         CACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAA                                                                                      >  SRR4302542.6780504/1‑94 (MQ=60)
         CACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAA                                                                                      >  SRR4302542.1555395/1‑94 (MQ=60)
          ACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAG                                                                                     <  SRR4302542.6068729/94‑1 (MQ=60)
           CTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGC                                                                                    >  SRR4302542.5860514/1‑94 (MQ=60)
            TTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCT                                                                                   <  SRR4302542.7188293/94‑1 (MQ=60)
             TCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTT                                                                                  <  SRR4302542.1646478/94‑1 (MQ=60)
             TCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTT                                                                                  <  SRR4302542.824662/94‑1 (MQ=60)
             TCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTT                                                                                  >  SRR4302542.824503/1‑94 (MQ=60)
              CGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATCAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTT                                                                                 >  SRR4302542.7374201/1‑94 (MQ=60)
              CGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTT                                                                                 >  SRR4302542.7374202/1‑94 (MQ=60)
              CGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTT                                                                                 <  SRR4302542.3924499/94‑1 (MQ=60)
              CGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTT                                                                                 >  SRR4302542.3848345/1‑94 (MQ=60)
              CGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTT                                                                                 <  SRR4302542.5086405/94‑1 (MQ=60)
              CGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTT                                                                                 >  SRR4302542.5105787/1‑94 (MQ=60)
              CGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTGCTGCGGTTAACCCCGCGCCCGCGTAAGCTTT                                                                                 <  SRR4302542.2442825/94‑1 (MQ=60)
               GTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTA                                                                                <  SRR4302542.3443018/94‑1 (MQ=60)
               GTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTA                                                                                <  SRR4302542.7484511/94‑1 (MQ=60)
               GTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTA                                                                                >  SRR4302542.7076465/1‑94 (MQ=60)
                TGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTAT                                                                               <  SRR4302542.2655387/94‑1 (MQ=60)
                TGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTAT                                                                               >  SRR4302542.5132092/1‑94 (MQ=60)
                TGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTAT                                                                               >  SRR4302542.1245883/1‑94 (MQ=60)
                 GTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATT                                                                              >  SRR4302542.40236/1‑94 (MQ=60)
                  TATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTG                                                                             <  SRR4302542.5667956/94‑1 (MQ=60)
                  TATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTG                                                                             <  SRR4302542.5147248/94‑1 (MQ=60)
                  TATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTG                                                                             >  SRR4302542.4152468/1‑94 (MQ=60)
                   ATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGT                                                                            >  SRR4302542.5609123/1‑94 (MQ=60)
                    TTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTA                                                                           <  SRR4302542.4902020/94‑1 (MQ=60)
                     TGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTAT                                                                          <  SRR4302542.6973521/94‑1 (MQ=60)
                     TGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTAT                                                                          <  SRR4302542.6595195/94‑1 (MQ=60)
                     TGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTAT                                                                          >  SRR4302542.4605695/1‑94 (MQ=60)
                     TGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTAT                                                                          <  SRR4302542.5475528/94‑1 (MQ=60)
                     TGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTAT                                                                          <  SRR4302542.5968599/94‑1 (MQ=60)
                       TGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTT                                                                        <  SRR4302542.221094/94‑1 (MQ=60)
                         TATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCT                                                                      <  SRR4302542.6681797/94‑1 (MQ=60)
                         TATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCT                                                                      <  SRR4302542.4849984/94‑1 (MQ=60)
                         TATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCT                                                                      >  SRR4302542.6774756/1‑94 (MQ=60)
                         TATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCT                                                                      >  SRR4302542.7326552/1‑94 (MQ=60)
                         TATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCT                                                                      <  SRR4302542.2419303/94‑1 (MQ=60)
                         TATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCT                                                                      <  SRR4302542.6447936/94‑1 (MQ=60)
                           TTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGG                                                                    <  SRR4302542.585515/94‑1 (MQ=60)
                           TTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGG                                                                    <  SRR4302542.1903783/94‑1 (MQ=60)
                           TTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGG                                                                    <  SRR4302542.6687769/94‑1 (MQ=60)
                            TTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGG                                                                   <  SRR4302542.3469192/94‑1 (MQ=60)
                            TTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGG                                                                   >  SRR4302542.2324775/1‑94 (MQ=60)
                            TTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGG                                                                   <  SRR4302542.6723461/94‑1 (MQ=60)
                            TTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGG                                                                   <  SRR4302542.3376673/94‑1 (MQ=60)
                             TACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGC                                                                  >  SRR4302542.2464202/1‑94 (MQ=60)
                             TACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGC                                                                  >  SRR4302542.5299418/1‑94 (MQ=60)
                               CTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTGCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGT                                                                >  SRR4302542.7585214/1‑94 (MQ=60)
                                 GTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGA                                                              >  SRR4302542.3393258/1‑94 (MQ=60)
                                   TGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAAT                                                            >  SRR4302542.200850/1‑94 (MQ=60)
                                   TGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAAT                                                            >  SRR4302542.3547964/1‑94 (MQ=60)
                                    GGGTGCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATA                                                           <  SRR4302542.2838348/94‑1 (MQ=60)
                                     GGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATAT                                                          <  SRR4302542.1583816/94‑1 (MQ=60)
                                     GGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATAT                                                          <  SRR4302542.3236405/94‑1 (MQ=60)
                                       TTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTA                                                        >  SRR4302542.3230836/1‑94 (MQ=60)
                                       TTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTA                                                        <  SRR4302542.7277174/94‑1 (MQ=60)
                                       TTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTA                                                        >  SRR4302542.3823727/1‑94 (MQ=60)
                                        TCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTAT                                                       <  SRR4302542.3005771/94‑1 (MQ=60)
                                        TCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTAT                                                       <  SRR4302542.1726425/94‑1 (MQ=60)
                                         CGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATC                                                      >  SRR4302542.1632715/1‑94 (MQ=60)
                                         CGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATC                                                      >  SRR4302542.6418225/1‑94 (MQ=60)
                                         CGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATC                                                      >  SRR4302542.6550256/1‑94 (MQ=60)
                                         CGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATC                                                      <  SRR4302542.4925548/94‑1 (MQ=60)
                                         CGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATC                                                      >  SRR4302542.6269966/1‑94 (MQ=60)
                                          GAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCT                                                     >  SRR4302542.4801136/1‑94 (MQ=60)
                                            AGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAA                                                   >  SRR4302542.381437/1‑94 (MQ=60)
                                             GGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAAT                                                  <  SRR4302542.4678856/94‑1 (MQ=60)
                                             GGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAAT                                                  <  SRR4302542.3755941/94‑1 (MQ=60)
                                             GGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAAT                                                  <  SRR4302542.4352031/94‑1 (MQ=60)
                                             GGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAAT                                                  >  SRR4302542.2224448/1‑94 (MQ=60)
                                             GGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAAT                                                  >  SRR4302542.6317589/1‑94 (MQ=60)
                                              GATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATG                                                 <  SRR4302542.2139013/94‑1 (MQ=60)
                                              GATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATG                                                 <  SRR4302542.7051375/94‑1 (MQ=60)
                                               ATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGT                                                <  SRR4302542.7443366/94‑1 (MQ=60)
                                                TTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTA                                               >  SRR4302542.3451830/1‑94 (MQ=60)
                                                 TCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAG                                              >  SRR4302542.5902432/1‑94 (MQ=60)
                                                 TCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAG                                              <  SRR4302542.785929/94‑1 (MQ=60)
                                                 TCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCGCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAG                                              >  SRR4302542.6283575/1‑94 (MQ=60)
                                                  CGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGC                                             >  SRR4302542.7336484/1‑94 (MQ=60)
                                                   GACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCT                                            >  SRR4302542.454832/1‑94 (MQ=60)
                                                   GACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCT                                            >  SRR4302542.4415299/1‑94 (MQ=60)
                                                   GACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCT                                            >  SRR4302542.3385387/1‑94 (MQ=60)
                                                     CATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTC                                          >  SRR4302542.6783155/1‑94 (MQ=60)
                                                     CATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTC                                          >  SRR4302542.3413942/1‑94 (MQ=60)
                                                      ATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCA                                         >  SRR4302542.275702/1‑94 (MQ=60)
                                                      ATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCA                                         <  SRR4302542.2074192/94‑1 (MQ=60)
                                                       TCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCAT                                        <  SRR4302542.6912633/94‑1 (MQ=60)
                                                       TCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCAT                                        <  SRR4302542.4288707/94‑1 (MQ=60)
                                                       TCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCAT                                        <  SRR4302542.7237879/94‑1 (MQ=60)
                                                        CTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATG                                       <  SRR4302542.4813245/94‑1 (MQ=60)
                                                        CTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATG                                       <  SRR4302542.3299243/94‑1 (MQ=60)
                                                         TTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGG                                      <  SRR4302542.324285/94‑1 (MQ=60)
                                                         TTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGG                                      <  SRR4302542.7361692/94‑1 (MQ=60)
                                                          TGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGT                                     <  SRR4302542.6960454/94‑1 (MQ=60)
                                                          TGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGT                                     <  SRR4302542.965191/94‑1 (MQ=60)
                                                           GCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTT                                    <  SRR4302542.819759/94‑1 (MQ=60)
                                                           GCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTT                                    <  SRR4302542.2768621/94‑1 (MQ=60)
                                                           GCAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTT                                    <  SRR4302542.5194727/94‑1 (MQ=60)
                                                            CAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTC                                   <  SRR4302542.1554016/94‑1 (MQ=60)
                                                            CAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTC                                   >  SRR4302542.897976/1‑94 (MQ=60)
                                                            CAATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTC                                   <  SRR4302542.6556820/94‑1 (MQ=60)
                                                              ATAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCA                                 <  SRR4302542.3160060/94‑1 (MQ=60)
                                                               TAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCAT                                <  SRR4302542.6352948/94‑1 (MQ=60)
                                                               TAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCAT                                <  SRR4302542.2074406/94‑1 (MQ=60)
                                                               TAAATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCAT                                <  SRR4302542.168299/94‑1 (MQ=60)
                                                                  ATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCA                             <  SRR4302542.7169880/94‑1 (MQ=60)
                                                                  ATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCA                             >  SRR4302542.2107474/1‑94 (MQ=60)
                                                                  ATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCA                             >  SRR4302542.747925/1‑94 (MQ=60)
                                                                  ATATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCA                             <  SRR4302542.3981907/94‑1 (MQ=60)
                                                                    ATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAA                           <  SRR4302542.3088980/94‑1 (MQ=60)
                                                                    ATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAA                           <  SRR4302542.2594772/94‑1 (MQ=60)
                                                                    ATTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAA                           >  SRR4302542.6041653/1‑94 (MQ=60)
                                                                    ATTTCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAA                           >  SRR4302542.3113284/1‑94 (MQ=60)
                                                                    ATTTCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAA                           >  SRR4302542.868734/1‑94 (MQ=60)
                                                                     TTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAA                          <  SRR4302542.6837738/94‑1 (MQ=60)
                                                                     TTTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAA                          >  SRR4302542.7248855/1‑94 (MQ=60)
                                                                     TTTCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAA                          >  SRR4302542.2777578/1‑94 (MQ=60)
                                                                      TTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAG                         <  SRR4302542.3276820/94‑1 (MQ=60)
                                                                      TTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAG                         >  SRR4302542.6505079/1‑94 (MQ=60)
                                                                      TTCAGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAG                         >  SRR4302542.3751803/1‑94 (MQ=60)
                                                                       TCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGA                        <  SRR4302542.4336250/94‑1 (MQ=60)
                                                                         AGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAAT                      >  SRR4302542.884880/1‑94 (MQ=60)
                                                                         AGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAAT                      >  SRR4302542.994933/1‑94 (MQ=60)
                                                                         AGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAAT                      >  SRR4302542.7154034/1‑94 (MQ=60)
                                                                         AGTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAAT                      <  SRR4302542.2233101/94‑1 (MQ=60)
                                                                          GTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATT                     >  SRR4302542.3258686/1‑94 (MQ=60)
                                                                          GTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATT                     <  SRR4302542.7571609/94‑1 (MQ=60)
                                                                          GTTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATT                     >  SRR4302542.5613963/1‑94 (MQ=60)
                                                                           TTCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTA                    <  SRR4302542.2180245/94‑1 (MQ=60)
                                                                            TCTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTAT                   <  SRR4302542.4032532/94‑1 (MQ=60)
                                                                             CTGCGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATC                  >  SRR4302542.3003420/1‑94 (MQ=60)
                                                                             CTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATC                  <  SRR4302542.7233664/94‑1 (MQ=60)
                                                                                CGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACC               <  SRR4302542.1122629/94‑1 (MQ=60)
                                                                                CGGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACC               >  SRR4302542.6482044/1‑94 (MQ=60)
                                                                                 GGTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCA              >  SRR4302542.7332795/1‑94 (MQ=60)
                                                                                  GTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCAT             >  SRR4302542.116240/1‑94 (MQ=60)
                                                                                  GTTAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCAT             >  SRR4302542.5035338/1‑94 (MQ=60)
                                                                                    TAACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTC           >  SRR4302542.2342358/1‑94 (MQ=60)
                                                                                     AACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCA          >  SRR4302542.5067954/1‑94 (MQ=60)
                                                                                     AACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCA          >  SRR4302542.7361905/1‑94 (MQ=60)
                                                                                     AACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCA          >  SRR4302542.6136923/1‑94 (MQ=60)
                                                                                     AACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCA          <  SRR4302542.2351644/94‑1 (MQ=60)
                                                                                     AACCTCGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATAACCATTCA          >  SRR4302542.7494766/1‑94 (MQ=60)
                                                                                      ACCTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCAT         >  SRR4302542.2989001/1‑94 (MQ=60)
                                                                                        CTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCATTG       >  SRR4302542.5330894/1‑94 (MQ=60)
                                                                                        CTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCATTG       >  SRR4302542.3813583/1‑94 (MQ=60)
                                                                                        CTCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCATTG       >  SRR4302542.705338/1‑94 (MQ=60)
                                                                                         TCGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCATTGT      >  SRR4302542.2491212/1‑94 (MQ=60)
                                                                                          CGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCATTGTG     <  SRR4302542.2479896/94‑1 (MQ=60)
                                                                                          CGCGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCATTGTG     <  SRR4302542.5759684/94‑1 (MQ=60)
                                                                                          CGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCATTGTG     <  SRR4302542.4099558/94‑1 (MQ=60)
                                                                                            CGCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCATTGTGAT   <  SRR4302542.680765/94‑1 (MQ=60)
                                                                                             GCCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCATTGTGATT  <  SRR4302542.885790/94‑1 (MQ=60)
                                                                                             |                                                                                             
TCCCAAAACCACTTCGTGTATTGTGTATTTACTGTTGGGTTCGAAGGATTCGACATCTTGCAATAAATATTTCAGTTCTGCGGTTAACCTCGCACCCGCGTAAGCTTTATTGTATTTCTGGGCGTGAATATTATCTAATGTAGCTTCATGGTTCCATCCAAAAGAATTATCACCATTCATTGTGATT  >  NC_000913/4424584‑4424770

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑