Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,600,078	C→T	W135* (TGG→TAG)	yjjP ←	putative structural protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,600,078	0	C	T	100.0%	1163.8 / NA	299	W135* (TGG→TAG)	yjjP	putative structural protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (151/148); total (151/148)

Only 100 of 299 total aligned reads displayed.

GCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCCATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAAT  >  NC_000913/4599988‑4600166

gCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTAt                                                                                        <  2:352103/93‑1 (MQ=255)

 cAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATc                                                                                       <  2:2086789/93‑1 (MQ=255)

   aagaagGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCtt                                                                                     >  1:4597318/1‑93 (MQ=255)

   aagaagGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCtt                                                                                     >  1:1023851/1‑93 (MQ=255)

    agaagGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTg                                                                                    <  2:2194410/93‑1 (MQ=255)

      aagGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTggg                                                                                  <  2:877828/93‑1 (MQ=255)

      aagGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTggg                                                                                  >  2:7506290/1‑93 (MQ=255)

      aagGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTggg                                                                                  >  2:719689/1‑93 (MQ=255)

       agGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGt                                                                                 <  1:6951618/93‑1 (MQ=255)

        ggTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTa                                                                                >  2:2460014/1‑93 (MQ=255)

        ggTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTa                                                                                >  1:4019038/1‑93 (MQ=255)

         gTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTaa                                                                               <  2:4233069/93‑1 (MQ=255)

           gatgaCGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACg                                                                             >  1:5545176/1‑93 (MQ=255)

            atgaCGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGt                                                                            <  2:5594394/93‑1 (MQ=255)

             tgaCGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTa                                                                           >  1:2070479/1‑93 (MQ=255)

              gaCGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTaa                                                                          >  1:6426879/1‑93 (MQ=255)

                cGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATg                                                                        <  1:2302821/93‑1 (MQ=255)

                cGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATg                                                                        <  1:7451988/93‑1 (MQ=255)

                 ggCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATgg                                                                       >  1:7279432/1‑93 (MQ=255)

                  gCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGc                                                                      >  1:3950402/1‑93 (MQ=255)

                   cACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCt                                                                     <  1:1278500/93‑1 (MQ=255)

                     ccATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGa                                                                   >  2:2837692/1‑93 (MQ=255)

                     ccATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGa                                                                   >  1:1368500/1‑93 (MQ=255)

                     ccATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGa                                                                   >  1:2449900/1‑93 (MQ=255)

                      cATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGaa                                                                  <  2:2339566/93‑1 (MQ=255)

                       aTCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAAt                                                                 <  1:5005251/93‑1 (MQ=255)

                        tCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAAtt                                                                >  1:6795435/1‑93 (MQ=255)

                        tCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAAtt                                                                <  2:905765/93‑1 (MQ=255)

                         cccAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAAttt                                                               <  2:1247851/93‑1 (MQ=255)

                          ccAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTg                                                              <  2:6007065/93‑1 (MQ=255)

                          ccAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTg                                                              <  1:5432833/93‑1 (MQ=255)

                          ccAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTg                                                              <  1:5726106/93‑1 (MQ=255)

                           cAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTgg                                                             <  1:1640139/93‑1 (MQ=255)

                            aGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGc                                                            >  2:5156036/1‑93 (MQ=255)

                            aGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGc                                                            <  2:6755345/93‑1 (MQ=255)

                             gccgccGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCt                                                           <  2:5277371/93‑1 (MQ=255)

                              ccACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTa                                                          >  2:3742191/1‑93 (MQ=255)

                              ccACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTa                                                          <  1:3386563/93‑1 (MQ=255)

                                aCCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTaaa                                                        <  2:521487/93‑1 (MQ=255)

                                aCCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTaaa                                                        <  2:641675/93‑1 (MQ=255)

                                aCCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTaaa                                                        >  2:1335054/1‑93 (MQ=255)

                                aCCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTaaa                                                        >  1:923222/1‑93 (MQ=255)

                                 ccGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAAt                                                       <  2:2764291/93‑1 (MQ=255)

                                 ccGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAAt                                                       >  1:4190326/1‑93 (MQ=255)

                                  cGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATc                                                      >  1:4294558/1‑93 (MQ=255)

                                   gTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCg                                                     <  2:483085/93‑1 (MQ=255)

                                   gTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCg                                                     >  2:6796709/1‑93 (MQ=255)

                                   gTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCg                                                     >  2:3263620/1‑93 (MQ=255)

                                   gTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCg                                                     >  2:3399450/1‑93 (MQ=255)

                                     tATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGtt                                                   >  1:2615209/1‑93 (MQ=255)

                                     tATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGtt                                                   >  1:5683583/1‑93 (MQ=255)

                                       ttaaGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTtc                                                 <  1:2369254/90‑1 (MQ=255)

                                       ttGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTtc                                                 <  1:1560835/93‑1 (MQ=255)

                                       ttGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTtc                                                 >  2:5517083/1‑93 (MQ=255)

                                         gAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTGAATCGTTtctc                                               >  1:2959106/1‑93 (MQ=255)

                                         gAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTtctc                                               <  1:6215873/93‑1 (MQ=255)

                                           gTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTa                                             <  2:1695945/93‑1 (MQ=255)

                                           gTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTa                                             <  1:1134152/93‑1 (MQ=255)

                                           gTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTa                                             >  2:2141655/1‑93 (MQ=255)

                                            tttACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTAc                                            >  1:4880651/1‑93 (MQ=255)

                                             ttACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACg                                           >  2:3966371/1‑93 (MQ=255)

                                                cAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCt                                        >  2:6542692/1‑93 (MQ=255)

                                                 aGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCtt                                       <  1:80814/93‑1 (MQ=255)

                                                  gAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCttt                                      <  1:6236601/93‑1 (MQ=255)

                                                      cAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTaa                                  >  1:2418333/1‑93 (MQ=255)

                                                        ggCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATc                                >  1:4729473/1‑93 (MQ=255)

                                                          cgcAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCca                              <  2:1430239/93‑1 (MQ=255)

                                                           gcAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCcag                             <  2:1770694/93‑1 (MQ=255)

                                                           gcAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCcag                             <  2:6284127/93‑1 (MQ=255)

                                                            cAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCcagc                            >  2:5844909/1‑93 (MQ=255)

                                                            cAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGCCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCcagc                            >  1:3067028/1‑93 (MQ=255)

                                                             aaGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCcagca                           >  2:2992969/1‑93 (MQ=255)

                                                              aGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCcagcag                          >  1:1691918/1‑93 (MQ=255)

                                                               gAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAga                         >  1:3243158/1‑93 (MQ=255)

                                                               gAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAga                         >  2:4146555/1‑93 (MQ=255)

                                                                  aGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAgatga                      <  1:6898967/93‑1 (MQ=255)

                                                                   ggCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAgatgat                     <  2:1735901/93‑1 (MQ=255)

                                                                    gCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGatgatg                    >  2:2565363/1‑93 (MQ=255)

                                                                     ccAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGc                   <  2:786984/93‑1 (MQ=255)

                                                                     ccAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGc                   <  1:2482092/93‑1 (MQ=255)

                                                                      cAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCt                  >  2:2026172/1‑93 (MQ=255)

                                                                      cAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCt                  >  2:6970113/1‑93 (MQ=255)

                                                                       nnccATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTc                 <  2:2688267/91‑1 (MQ=255)

                                                                       aaCCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTc                 >  1:5111733/1‑93 (MQ=255)

                                                                       aaCCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTc                 >  2:1594764/1‑93 (MQ=255)

                                                                        aCCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTcc                >  1:4567032/1‑93 (MQ=255)

                                                                          cATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGc              <  1:2845924/93‑1 (MQ=255)

                                                                           aTTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCa             >  2:402938/1‑93 (MQ=255)

                                                                           aTTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCa             >  1:5914196/1‑93 (MQ=255)

                                                                            ttAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCaa            <  2:4611542/93‑1 (MQ=255)

                                                                            ttAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCaa            >  1:4461435/1‑93 (MQ=255)

                                                                              aaGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGa          >  1:6562219/1‑93 (MQ=255)

                                                                               aGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGaa         >  2:1393240/1‑93 (MQ=255)

                                                                               aGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGaa         <  2:314163/93‑1 (MQ=255)

                                                                               aGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGaa         >  1:1040153/1‑93 (MQ=255)

                                                                                  cTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATca      >  2:3303077/1‑93 (MQ=255)

                                                                                   tACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATcac     >  1:4151804/1‑93 (MQ=255)

                                                                                    aCCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATcaca    <  2:4729473/93‑1 (MQ=255)

                                                                                      cAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAAt  >  1:3656918/1‑93 (MQ=255)

                                                                                      cAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAAt  <  1:2195320/93‑1 (MQ=255)

GCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCCATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAAT  >  NC_000913/4599988‑4600166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CTGGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCCATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCT  >  NC_000913/4599985‑4600171

CTGGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCT                                                                                               >  SRR4302542.2009235/1‑94 (MQ=60)

CTGGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCT                                                                                               <  SRR4302542.6712993/94‑1 (MQ=60)

CTGGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCT                                                                                               >  SRR4302542.1301815/1‑94 (MQ=60)

CTGGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCT                                                                                               <  SRR4302542.1484132/94‑1 (MQ=60)

  GGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTAT                                                                                             <  SRR4302542.3501990/94‑1 (MQ=60)

    CAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCT                                                                                           <  SRR4302542.2590472/94‑1 (MQ=60)

    CAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCT                                                                                           >  SRR4302542.4844587/1‑94 (MQ=60)

    CAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCT                                                                                           <  SRR4302542.4202150/94‑1 (MQ=60)

     AAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTT                                                                                          >  SRR4302542.1032675/1‑94 (MQ=60)

     AAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTT                                                                                          >  SRR4302542.4642265/1‑94 (MQ=60)

     AAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTT                                                                                          >  SRR4302542.2470710/1‑94 (MQ=60)

     AAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTT                                                                                          >  SRR4302542.4642266/1‑94 (MQ=60)

     AAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTT                                                                                          >  SRR4302542.7365692/1‑94 (MQ=60)

        GAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGG                                                                                       <  SRR4302542.5811486/94‑1 (MQ=60)

        GAAGGGGATGGCGGCACCATCCCCGCCACCGGTTTTGAGTTTACAGAAACCGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGG                                                                                       >  SRR4302542.2404828/1‑94 (MQ=60)

         AAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGT                                                                                      <  SRR4302542.3630275/94‑1 (MQ=60)

          AGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTA                                                                                     >  SRR4302542.4058699/1‑94 (MQ=60)

          AGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTA                                                                                     >  SRR4302542.2676882/1‑94 (MQ=60)

          AGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTA                                                                                     <  SRR4302542.7019922/94‑1 (MQ=60)

           aggtaatACGGCCCCATCCCAGCCCCCGTTATTTAATTTACAAAAACAGGCG‑CAAAAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAA                                                                                    <  SRR4302542.2774986/87‑1 (MQ=60)

            GTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAAC                                                                                   <  SRR4302542.3997800/94‑1 (MQ=60)

            GTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAAC                                                                                   >  SRR4302542.1182843/1‑94 (MQ=60)

             TGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACG                                                                                  >  SRR4302542.5599063/1‑94 (MQ=60)

             TGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACG                                                                                  <  SRR4302542.1568998/94‑1 (MQ=60)

               ATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTA                                                                                >  SRR4302542.4061070/1‑94 (MQ=60)

               ATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTA                                                                                >  SRR4302542.2088374/1‑94 (MQ=60)

                TGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAA                                                                               >  SRR4302542.6490203/1‑94 (MQ=60)

                 GACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAAT                                                                              <  SRR4302542.2906581/94‑1 (MQ=60)

                  ACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATG                                                                             <  SRR4302542.345492/94‑1 (MQ=60)

                   CGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGG                                                                            <  SRR4302542.2322605/94‑1 (MQ=60)

                   CGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGG                                                                            <  SRR4302542.3306566/94‑1 (MQ=60)

                   CGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGG                                                                            <  SRR4302542.6496155/94‑1 (MQ=60)

                   CGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGG                                                                            >  SRR4302542.7350825/1‑94 (MQ=60)

                   CGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGG                                                                            <  SRR4302542.7524957/94‑1 (MQ=60)

                    GGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGC                                                                           >  SRR4302542.2134347/1‑94 (MQ=60)

                    GGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGC                                                                           >  SRR4302542.3989406/1‑94 (MQ=60)

                     GCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCT                                                                          <  SRR4302542.3000413/94‑1 (MQ=60)

                     GCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCT                                                                          <  SRR4302542.246171/94‑1 (MQ=60)

                     GCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCT                                                                          <  SRR4302542.5256412/94‑1 (MQ=60)

                      CACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTG                                                                         <  SRR4302542.1289502/94‑1 (MQ=60)

                      CACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTG                                                                         <  SRR4302542.6984549/94‑1 (MQ=60)

                       ACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGA                                                                        <  SRR4302542.239383/94‑1 (MQ=60)

                       ACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGA                                                                        >  SRR4302542.1380327/1‑94 (MQ=60)

                       ACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGA                                                                        >  SRR4302542.2473728/1‑94 (MQ=60)

                         CATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAAT                                                                      >  SRR4302542.612524/1‑94 (MQ=60)

                          ATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATT                                                                     >  SRR4302542.2486752/1‑94 (MQ=60)

                          ATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATT                                                                     >  SRR4302542.6862255/1‑94 (MQ=60)

                          ATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATT                                                                     <  SRR4302542.5053862/94‑1 (MQ=60)

                          ATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATT                                                                     >  SRR4302542.1127780/1‑94 (MQ=60)

                           TCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTT                                                                    <  SRR4302542.104117/94‑1 (MQ=60)

                             CCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGG                                                                  <  SRR4302542.5485620/94‑1 (MQ=60)

                             CCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGG                                                                  >  SRR4302542.7235198/1‑94 (MQ=60)

                             CCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGG                                                                  >  SRR4302542.2955529/1‑94 (MQ=60)

                             CCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGG                                                                  <  SRR4302542.5781680/94‑1 (MQ=60)

                              CAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGC                                                                 <  SRR4302542.1654314/94‑1 (MQ=60)

                              CAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGC                                                                 >  SRR4302542.5675698/1‑94 (MQ=60)

                               AGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCT                                                                >  SRR4302542.4316426/1‑94 (MQ=60)

                               AGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCT                                                                <  SRR4302542.4321172/94‑1 (MQ=60)

                                GCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTA                                                               >  SRR4302542.1349304/1‑94 (MQ=60)

                                GCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTA                                                               <  SRR4302542.628559/94‑1 (MQ=60)

                                GCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTA                                                               >  SRR4302542.6029804/1‑94 (MQ=60)

                                 CCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAA                                                              <  SRR4302542.3418354/94‑1 (MQ=60)

                                  CACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAA                                                             <  SRR4302542.46259/94‑1 (MQ=60)

                                  CACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAA                                                             >  SRR4302542.931168/1‑94 (MQ=60)

                                  CACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAA                                                             >  SRR4302542.2353393/1‑94 (MQ=60)

                                  CACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAA                                                             >  SRR4302542.1234944/1‑94 (MQ=60)

                                   ACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAAT                                                            >  SRR4302542.4231647/1‑94 (MQ=60)

                                   ACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAAT                                                            >  SRR4302542.765800/1‑94 (MQ=60)

                                   ACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAAT                                                            <  SRR4302542.4428102/94‑1 (MQ=60)

                                    CCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATC                                                           >  SRR4302542.4336799/1‑94 (MQ=60)

                                     CGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCG                                                          <  SRR4302542.1538059/94‑1 (MQ=60)

                                     CGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCG                                                          >  SRR4302542.3244557/1‑94 (MQ=60)

                                      GTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGT                                                         >  SRR4302542.4583539/1‑94 (MQ=60)

                                      GTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGT                                                         >  SRR4302542.7017988/1‑94 (MQ=60)

                                      GTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGT                                                         >  SRR4302542.5589311/1‑94 (MQ=60)

                                       TTATTGAGTTTTCAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTT                                                        <  SRR4302542.6427019/94‑1 (MQ=60)

                                       TTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTT                                                        <  SRR4302542.4025558/94‑1 (MQ=60)

                                       TTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTT                                                        >  SRR4302542.785059/1‑94 (MQ=60)

                                       TTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTT                                                        >  SRR4302542.2640476/1‑94 (MQ=60)

                                       TTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTT                                                        >  SRR4302542.5738771/1‑94 (MQ=60)

                                        TATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTT                                                       <  SRR4302542.4515904/94‑1 (MQ=60)

                                        TATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTT                                                       >  SRR4302542.5768923/1‑94 (MQ=60)

                                        TATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTT                                                       >  SRR4302542.497459/1‑94 (MQ=60)

                                        TATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTT                                                       >  SRR4302542.7401456/1‑94 (MQ=60)

                                         ATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTC                                                      <  SRR4302542.3744582/94‑1 (MQ=60)

                                          TTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCT                                                     <  SRR4302542.1574328/94‑1 (MQ=60)

                                          TTAAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCT                                                     <  SRR4302542.2389951/94‑1 (MQ=60)

                                           TGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTGAATCGTTTCTC                                                    >  SRR4302542.2987468/1‑94 (MQ=60)

                                            GAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCT                                                   <  SRR4302542.6277104/94‑1 (MQ=60)

                                              GTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTAC                                                 <  SRR4302542.1143862/94‑1 (MQ=60)

                                              GTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTAC                                                 <  SRR4302542.2233347/94‑1 (MQ=60)

                                              GTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTAC                                                 <  SRR4302542.5102864/94‑1 (MQ=60)

                                              GTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTAC                                                 >  SRR4302542.4928146/1‑94 (MQ=60)

                                               TTTACAGAAACAGGCGCCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTAC                                                 <  SRR4302542.2369470/94‑1 (MQ=60)

                                               TTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACG                                                <  SRR4302542.3241255/94‑1 (MQ=60)

                                                TTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGC                                               <  SRR4302542.5482933/94‑1 (MQ=60)

                                                  ACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTCACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCT                                             <  SRR4302542.6282773/94‑1 (MQ=60)

                                                  ACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCT                                             <  SRR4302542.2605115/94‑1 (MQ=60)

                                                   CAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTT                                            <  SRR4302542.5666034/94‑1 (MQ=60)

                                                   CAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTT                                            >  SRR4302542.1584053/1‑94 (MQ=60)

                                                    AGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTT                                           >  SRR4302542.1648347/1‑94 (MQ=60)

                                                    AGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTT                                           <  SRR4302542.6792660/94‑1 (MQ=60)

                                                    AGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTT                                           <  SRR4302542.81489/94‑1 (MQ=60)

                                                     GAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTG                                          >  SRR4302542.1658154/1‑94 (MQ=60)

                                                     GAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTG                                          <  SRR4302542.6297999/94‑1 (MQ=60)

                                                        ACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAA                                       >  SRR4302542.2441843/1‑94 (MQ=60)

                                                        ACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAA                                       <  SRR4302542.904960/94‑1 (MQ=60)

                                                         CAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAAT                                      <  SRR4302542.6479620/94‑1 (MQ=60)

                                                         CAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAAT                                      >  SRR4302542.6563074/1‑94 (MQ=60)

                                                          AGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATC                                     <  SRR4302542.6931634/94‑1 (MQ=60)

                                                          AGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATC                                     >  SRR4302542.4775596/1‑94 (MQ=60)

                                                           GGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCC                                    <  SRR4302542.1080341/94‑1 (MQ=60)

                                                             CG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAG                                  <  SRR4302542.3784695/94‑1 (MQ=60)

                                                             CG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAG                                  >  SRR4302542.2287883/1‑94 (MQ=60)

                                                             CG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAG                                  <  SRR4302542.1722326/94‑1 (MQ=60)

                                                              G‑CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGCCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGC                                 >  SRR4302542.3096273/1‑94 (MQ=60)

                                                                CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCA                                >  SRR4302542.4822212/1‑94 (MQ=60)

                                                                CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCA                                <  SRR4302542.1647768/94‑1 (MQ=60)

                                                                 AAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAG                               >  SRR4302542.1706568/1‑94 (MQ=60)

                                                                 AAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAG                               <  SRR4302542.3322549/94‑1 (MQ=60)

                                                                  AGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGA                              >  SRR4302542.3273814/1‑94 (MQ=60)

                                                                   GAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGAT                             <  SRR4302542.1334883/94‑1 (MQ=60)

                                                                   GAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGAT                             <  SRR4302542.2506145/94‑1 (MQ=60)

                                                                     AAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGA                           >  SRR4302542.4731648/1‑94 (MQ=60)

                                                                      AGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGAT                          >  SRR4302542.4090128/1‑94 (MQ=60)

                                                                      AGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGAT                          <  SRR4302542.6966712/94‑1 (MQ=60)

                                                                       GGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATG                         <  SRR4302542.5739903/94‑1 (MQ=60)

                                                                         CCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCT                       <  SRR4302542.2506153/94‑1 (MQ=60)

                                                                         CCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCT                       >  SRR4302542.1920130/1‑94 (MQ=60)

                                                                          CAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTC                      >  SRR4302542.5161379/1‑94 (MQ=60)

                                                                           AACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCC                     >  SRR4302542.4611741/1‑94 (MQ=60)

                                                                            ACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCG                    >  SRR4302542.4772377/1‑94 (MQ=60)

                                                                            ACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCG                    <  SRR4302542.5094342/94‑1 (MQ=60)

                                                                            ACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCG                    >  SRR4302542.6901123/1‑94 (MQ=60)

                                                                              CATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCA                  <  SRR4302542.4471451/94‑1 (MQ=60)

                                                                              CATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCA                  >  SRR4302542.5971512/1‑94 (MQ=60)

                                                                              CATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCA                  <  SRR4302542.2873278/94‑1 (MQ=60)

                                                                               ATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAA                 >  SRR4302542.4505196/1‑94 (MQ=60)

                                                                               ATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAA                 >  SRR4302542.5017618/1‑94 (MQ=60)

                                                                                TTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAG                >  SRR4302542.902194/1‑94 (MQ=60)

                                                                                TTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAG                <  SRR4302542.2117659/94‑1 (MQ=60)

                                                                                 TAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGA               >  SRR4302542.6626893/1‑94 (MQ=60)

                                                                                  AAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAA              >  SRR4302542.1049086/1‑94 (MQ=60)

                                                                                  AAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAA              >  SRR4302542.5551479/1‑94 (MQ=60)

                                                                                    GGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATC            >  SRR4302542.1663323/1‑94 (MQ=60)

                                                                                      CTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCAC          >  SRR4302542.4192688/1‑94 (MQ=60)

                                                                                      CTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCAC          >  SRR4302542.301955/1‑94 (MQ=60)

                                                                                        ACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAA        <  SRR4302542.6746358/94‑1 (MQ=60)

                                                                                         CCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAAT       >  SRR4302542.270921/1‑94 (MQ=60)

                                                                                         CCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAAT       >  SRR4302542.4205584/1‑94 (MQ=60)

                                                                                         CCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAAT       >  SRR4302542.3691242/1‑94 (MQ=60)

                                                                                         CCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAAT       <  SRR4302542.5871118/94‑1 (MQ=60)

                                                                                          CAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATG      <  SRR4302542.7314961/94‑1 (MQ=60)

                                                                                          CAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATG      <  SRR4302542.2214226/94‑1 (MQ=60)

                                                                                           AGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGT     >  SRR4302542.3462839/1‑94 (MQ=60)

                                                                                             CTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGC   <  SRR4302542.7142738/94‑1 (MQ=60)

                                                                                             CTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGC   >  SRR4302542.261072/1‑94 (MQ=60)

                                                                                             CTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGC   >  SRR4302542.1036853/1‑94 (MQ=60)

                                                                                              TATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCT  <  SRR4302542.400297/94‑1 (MQ=60)

CTGGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCG‑CAAGAAAGGCCAACCATTAAGGCTACCAGCCATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCT  >  NC_000913/4599985‑4600171

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`