Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,601,332	A→G	Q96R (CAG→CGG)	yjjQ →	putative regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,601,332	0	A	G	81.5%	688.4 / 166.1	335	Q96R (CAG→CGG)	yjjQ	putative regulator
Reads supporting (aligned to +/- strand): ref base A (42/20); new base G (148/125); total (190/145)
Fisher's exact test for biased strand distribution p-value = 6.46e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.51e-01

Only 100 of 344 total aligned reads displayed.

CCACGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATA  >  NC_000913/4601241‑4601424

 cACGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCggg                                                                                            >  2:5101743/1‑93 (MQ=255)

  aCGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGc                                                                                           >  1:1373642/1‑93 (MQ=255)

  aCGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGc                                                                                           >  2:7457018/1‑93 (MQ=255)

  aCGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGc                                                                                           >  2:6929963/1‑93 (MQ=255)

   cGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCa                                                                                          <  1:2068376/93‑1 (MQ=255)

    gTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAg                                                                                         >  2:5460712/1‑93 (MQ=255)

     ttCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGt                                                                                        >  1:3947839/1‑93 (MQ=255)

      tCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTa                                                                                       <  1:6119034/93‑1 (MQ=255)

      tCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTa                                                                                       <  1:5592914/93‑1 (MQ=255)

       cTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAg                                                                                      <  2:650574/93‑1 (MQ=255)

       cTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAg                                                                                      <  1:3621851/93‑1 (MQ=255)

        tGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGa                                                                                     <  1:4288033/93‑1 (MQ=255)

         gTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTGACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGaa                                                                                    >  2:927685/1‑93 (MQ=255)

          tttGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAAc                                                                                   >  1:3413413/1‑93 (MQ=255)

             gtgAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGGGTCACCCTCCTGGTATTCCCGGGCAGTAGAACTGc                                                                                >  1:3663409/1‑93 (MQ=255)

              tgAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCt                                                                               <  1:5900417/93‑1 (MQ=255)

                aaCATTATTATACTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCa                                                                             >  2:4655691/1‑93 (MQ=255)

                 aCATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCAt                                                                            >  1:5745413/1‑93 (MQ=255)

                   attattattCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCAtgt                                                                          >  2:2854725/1‑93 (MQ=255)

                    ttattattCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCAtgtg                                                                         >  1:911110/1‑93 (MQ=255)

                    ttattattCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCAtgtg                                                                         >  2:5837932/1‑93 (MQ=255)

                      attattCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGcc                                                                       >  1:6933856/1‑93 (MQ=255)

                       ttattCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGccc                                                                      >  1:7121090/1‑93 (MQ=255)

                        tattCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCt                                                                     <  2:3240278/93‑1 (MQ=255)

                         attCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTa                                                                    <  1:2172076/93‑1 (MQ=255)

                           tCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACg                                                                  >  1:2767207/1‑93 (MQ=255)

                           tCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACg                                                                  >  1:2849995/1‑93 (MQ=255)

                            cTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACgg                                                                 <  1:487114/93‑1 (MQ=255)

                             tttAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGc                                                                >  2:4134167/1‑93 (MQ=255)

                               tAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGa                                                              <  2:2327297/93‑1 (MQ=255)

                               tAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGa                                                              <  1:6820100/93‑1 (MQ=255)

                                 aTCTCATAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACg                                                            >  2:4776470/1‑93 (MQ=255)

                                 aTCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACg                                                            <  1:1301031/93‑1 (MQ=255)

                                 aTCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACg                                                            <  2:5245166/93‑1 (MQ=255)

                                 aTCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACg                                                            >  1:3351267/1‑93 (MQ=255)

                                 aTCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACg                                                            >  1:3494063/1‑93 (MQ=255)

                                    tcACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTa                                                         >  1:4621230/1‑93 (MQ=255)

                                    tcACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTa                                                         <  2:7180490/93‑1 (MQ=255)

                                    tcACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTa                                                         <  1:6564913/93‑1 (MQ=255)

                                     cacaATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTAt                                                        >  2:7307785/1‑93 (MQ=255)

                                     cacaATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTAt                                                        <  2:5279628/93‑1 (MQ=255)

                                      acaATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTAtt                                                       <  2:1145641/93‑1 (MQ=255)

                                      acaATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTAtt                                                       >  1:5805553/1‑93 (MQ=255)

                                      acaATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTAtt                                                       <  2:6795907/93‑1 (MQ=255)

                                         atatCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTc                                                    <  2:2711450/93‑1 (MQ=255)

                                           atCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTg                                                  >  1:1221783/1‑93 (MQ=255)

                                            tCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGa                                                 <  2:4332580/93‑1 (MQ=255)

                                                gAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGtt                                             <  1:2272197/93‑1 (MQ=255)

                                                gAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGtt                                             >  2:6106705/1‑93 (MQ=255)

                                                gAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGtt                                             >  1:1987369/1‑93 (MQ=255)

                                                 aaaTTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTg                                            >  2:3499398/1‑93 (MQ=255)

                                                   aTTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGaa                                          >  2:1877298/1‑93 (MQ=255)

                                                   aTTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGaa                                          <  2:4960442/93‑1 (MQ=255)

                                                    ttaaCTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCATACGGCGACGTTATTGTCTGATGTTGAAc                                         >  1:2713262/4‑93 (MQ=255)

                                                    ttCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAAc                                         <  2:1775113/93‑1 (MQ=255)

                                                        cTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCAt                                     >  2:3429588/1‑93 (MQ=255)

                                                        cTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCAt                                     >  1:5233838/1‑93 (MQ=255)

                                                        cTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCAt                                     >  1:5048480/1‑93 (MQ=255)

                                                         tGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCAtt                                    >  1:4406178/1‑93 (MQ=255)

                                                         tGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCAtt                                    <  2:3666908/93‑1 (MQ=255)

                                                         tGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCAtt                                    <  1:1614777/93‑1 (MQ=255)

                                                           ggTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTga                                  <  2:3102593/93‑1 (MQ=255)

                                                           ggTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTga                                  >  1:7519241/1‑93 (MQ=255)

                                                              tttCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGaa                               <  2:7095917/93‑1 (MQ=255)

                                                              tttCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGaa                               <  1:6676694/93‑1 (MQ=255)

                                                              tttCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGaa                               <  2:6631379/93‑1 (MQ=255)

                                                                tCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATc                             <  1:3074230/93‑1 (MQ=255)

                                                                tCATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATc                             <  1:929126/93‑1 (MQ=255)

                                                                 cATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCt                            <  1:3807194/93‑1 (MQ=255)

                                                                 cATGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCt                            <  1:2432671/93‑1 (MQ=255)

                                                                  aTGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTg                           >  1:500987/1‑93 (MQ=255)

                                                                   tGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTgg                          >  2:3287410/1‑93 (MQ=255)

                                                                   tGGTGTCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTgg                          >  1:4138035/1‑93 (MQ=255)

                                                                     gtgtCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTggnn                        >  2:1504297/1‑91 (MQ=255)

                                                                     gtgtCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTc                        <  2:5588545/93‑1 (MQ=255)

                                                                       gtCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCaa                      <  1:4795714/93‑1 (MQ=255)

                                                                       gtCACGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAACCTGGTCaa                      <  2:4857111/93‑1 (MQ=255)

                                                                          aCGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGAc                   >  1:1124520/1‑93 (MQ=255)

                                                                          aCGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGAc                   <  2:1394712/93‑1 (MQ=255)

                                                                           cGCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGAcc                  >  2:7411964/1‑93 (MQ=255)

                                                                            gCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCg                 >  1:1031556/1‑93 (MQ=255)

                                                                            gCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCg                 <  1:7217479/93‑1 (MQ=255)

                                                                            gCTCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCg                 >  1:3534595/1‑93 (MQ=255)

                                                                             cTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGt                >  2:2157270/1‑93 (MQ=255)

                                                                              tCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTa               >  2:2967278/1‑93 (MQ=255)

                                                                              tCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTa               >  2:84542/1‑93 (MQ=255)

                                                                              tCCTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTa               <  1:181342/93‑1 (MQ=255)

                                                                               ccTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTAc              <  2:786665/93‑1 (MQ=255)

                                                                               ccTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTAc              <  1:4629952/93‑1 (MQ=255)

                                                                               ccTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTAc              <  1:3251423/93‑1 (MQ=255)

                                                                                cTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACg             >  1:6852709/1‑93 (MQ=255)

                                                                                cTGGTATTCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACg             <  1:6433859/93‑1 (MQ=255)

                                                                                      ttCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCgg       >  1:5532031/1‑93 (MQ=255)

                                                                                      ttCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCgg       <  1:848315/93‑1 (MQ=255)

                                                                                       tCCCGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGc      <  2:4449532/93‑1 (MQ=255)

                                                                                        cccGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCa     >  2:1601501/1‑93 (MQ=255)

                                                                                        cccGGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCa     <  2:536073/93‑1 (MQ=255)

                                                                                         ccAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCaa    <  2:258530/93‑1 (MQ=255)

                                                                                           aGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATa  >  2:6430346/1‑93 (MQ=255)

                                                                                           aGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATa  <  2:3375093/93‑1 (MQ=255)

CCACGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATA  >  NC_000913/4601241‑4601424

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

ATCCACGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATA  >  NC_000913/4601239‑4601424

ATCCACGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑G                                                                                              >  SRR4302542.5736098/1‑94 (MQ=60)

 TCCACGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GG                                                                                             <  SRR4302542.3311179/94‑1 (MQ=60)

 TCCACGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GG                                                                                             <  SRR4302542.1753871/94‑1 (MQ=60)

  CCACGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACGATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGG                                                                                            >  SRR4302542.2075898/1‑94 (MQ=60)

  CCACGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGG                                                                                            >  SRR4302542.3526045/1‑94 (MQ=60)

  CCACGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGG                                                                                            >  SRR4302542.2952982/1‑94 (MQ=60)

  CCACGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGG                                                                                            >  SRR4302542.1189081/1‑94 (MQ=60)

   CACGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGC                                                                                           >  SRR4302542.5619821/1‑94 (MQ=60)

   CACGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGC                                                                                           >  SRR4302542.1385513/1‑94 (MQ=60)

   CACGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGGC                                                                                           >  SRR4302542.5740382/1‑94 (MQ=60)

     CGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAG                                                                                         <  SRR4302542.2086259/94‑1 (MQ=60)

     CGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAG                                                                                         >  SRR4302542.4392910/1‑94 (MQ=60)

     CGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAG                                                                                         >  SRR4302542.5629459/1‑94 (MQ=60)

      GTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGT                                                                                        >  SRR4302542.1275939/1‑94 (MQ=60)

      GTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGT                                                                                        >  SRR4302542.1054124/1‑94 (MQ=60)

      GTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGGCAGT                                                                                        >  SRR4302542.3986820/1‑94 (MQ=60)

        TCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAG                                                                                      <  SRR4302542.6135942/94‑1 (MQ=60)

        TCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGGCAGTAG                                                                                      <  SRR4302542.5647260/94‑1 (MQ=60)

        TCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGGCAGTAG                                                                                      <  SRR4302542.6178241/94‑1 (MQ=60)

         CTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGA                                                                                     >  SRR4302542.5187447/1‑94 (MQ=60)

         CTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGA                                                                                     >  SRR4302542.2471536/1‑94 (MQ=60)

         CTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGA                                                                                     <  SRR4302542.3655591/94‑1 (MQ=60)

         CTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGA                                                                                     >  SRR4302542.2811405/1‑94 (MQ=60)

          TGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAA                                                                                    <  SRR4302542.4330208/94‑1 (MQ=60)

          TGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAA                                                                                    <  SRR4302542.2185191/94‑1 (MQ=60)

           GTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAAC                                                                                   >  SRR4302542.4861226/1‑94 (MQ=60)

           GTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAAC                                                                                   >  SRR4302542.4861227/1‑94 (MQ=60)

           GTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAAC                                                                                   <  SRR4302542.4768524/94‑1 (MQ=60)

           GTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGGCAGTAGAAC                                                                                   >  SRR4302542.3445392/1‑94 (MQ=60)

            TTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACT                                                                                  <  SRR4302542.3661654/94‑1 (MQ=60)

              TGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGGCAGTAGAACTGC                                                                                >  SRR4302542.1913591/1‑94 (MQ=60)

              GGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGGGTCACCCTCCTGGTATTCCC‑GGGCAGTAGAACTGC                                                                                >  SRR4302542.3698105/1‑94 (MQ=60)

                TGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTC                                                                              <  SRR4302542.5957618/94‑1 (MQ=60)

                TGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTC                                                                              >  SRR4302542.2661409/1‑94 (MQ=60)

                 GAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCA                                                                             >  SRR4302542.5393662/1‑94 (MQ=60)

                  AACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCAT                                                                            <  SRR4302542.6952243/94‑1 (MQ=60)

                  AACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCAT                                                                            >  SRR4302542.5740942/1‑94 (MQ=60)

                  AACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCAT                                                                            >  SRR4302542.5801189/1‑94 (MQ=60)

                  AACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCAT                                                                            <  SRR4302542.3837063/94‑1 (MQ=60)

                   ACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATG                                                                           >  SRR4302542.5818337/1‑94 (MQ=60)

                   ACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATG                                                                           <  SRR4302542.5029059/94‑1 (MQ=60)

                    CATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGT                                                                          >  SRR4302542.7085625/1‑94 (MQ=60)

                    CATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGT                                                                          >  SRR4302542.46672/1‑94 (MQ=60)

                    CATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGT                                                                          >  SRR4302542.2794729/1‑94 (MQ=60)

                     ATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTG                                                                         >  SRR4302542.918967/1‑94 (MQ=60)

                     ATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTG                                                                         <  SRR4302542.6751410/94‑1 (MQ=60)

                     ATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTG                                                                         >  SRR4302542.2781734/1‑94 (MQ=60)

                      TTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGC                                                                        >  SRR4302542.2232477/1‑94 (MQ=60)

                      TTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGC                                                                        <  SRR4302542.787130/94‑1 (MQ=60)

                      TTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGC                                                                        >  SRR4302542.5953675/1‑94 (MQ=60)

                       TATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCC                                                                       >  SRR4302542.6904287/1‑94 (MQ=60)

                       TATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCC                                                                       >  SRR4302542.7001932/1‑94 (MQ=60)

                       TATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCC                                                                       >  SRR4302542.4675165/1‑94 (MQ=60)

                        ATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCC                                                                      >  SRR4302542.4362321/1‑94 (MQ=60)

                        ATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCC                                                                      >  SRR4302542.1464086/1‑94 (MQ=60)

                        ATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCC                                                                      >  SRR4302542.1857362/1‑94 (MQ=60)

                        ATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCC                                                                      >  SRR4302542.7190985/1‑94 (MQ=60)

                        ATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGAGCCC                                                                      >  SRR4302542.1988267/1‑94 (MQ=60)

                          TATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTA                                                                    >  SRR4302542.6590960/1‑94 (MQ=60)

                           ATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTAC                                                                   <  SRR4302542.2190774/94‑1 (MQ=60)

                           ATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTAC                                                                   <  SRR4302542.5879414/94‑1 (MQ=60)

                           ATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTAC                                                                   <  SRR4302542.4774422/94‑1 (MQ=60)

                           ATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTAC                                                                   >  SRR4302542.3671890/1‑94 (MQ=60)

                           ATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTAC                                                                   >  SRR4302542.1297921/1‑94 (MQ=60)

                           ATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTAC                                                                   <  SRR4302542.5046186/94‑1 (MQ=60)

                            TTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACG                                                                  <  SRR4302542.5825304/94‑1 (MQ=60)

                            TTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACG                                                                  >  SRR4302542.3347803/1‑94 (MQ=60)

                            TTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACG                                                                  >  SRR4302542.2793867/1‑94 (MQ=60)

                            TTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACG                                                                  >  SRR4302542.966155/1‑94 (MQ=60)

                            TTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACG                                                                  >  SRR4302542.2877395/1‑94 (MQ=60)

                             TCTTTAATCTCACGATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGG                                                                 >  SRR4302542.4464855/1‑94 (MQ=60)

                             TCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGG                                                                 >  SRR4302542.6588038/1‑94 (MQ=60)

                             TCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACGG                                                                 >  SRR4302542.5916044/1‑94 (MQ=60)

                              CTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGC                                                                <  SRR4302542.3561571/94‑1 (MQ=60)

                              CTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACGGC                                                                <  SRR4302542.491329/94‑1 (MQ=60)

                               TTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCG                                                               >  SRR4302542.1383474/1‑94 (MQ=60)

                                 TAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGAC                                                             >  SRR4302542.3597802/1‑94 (MQ=60)

                                 TAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGAC                                                             <  SRR4302542.4556066/94‑1 (MQ=60)

                                 TAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACGGCGAC                                                             <  SRR4302542.6887138/94‑1 (MQ=60)

                                 TAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACGGCGAC                                                             <  SRR4302542.3221879/94‑1 (MQ=60)

                                  AATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACG                                                            >  SRR4302542.6285971/1‑94 (MQ=60)

                                  AATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACG                                                            <  SRR4302542.2226619/94‑1 (MQ=60)

                                  AATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACG                                                            >  SRR4302542.2497702/1‑94 (MQ=60)

                                  AATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACGGCGACG                                                            >  SRR4302542.3526742/1‑94 (MQ=60)

                                  AATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACGGCGACG                                                            >  SRR4302542.3382796/1‑94 (MQ=60)

                                   ATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGT                                                           <  SRR4302542.1312235/94‑1 (MQ=60)

                                   ATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGT                                                           >  SRR4302542.4239600/1‑94 (MQ=60)

                                   ATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGT                                                           >  SRR4302542.4999379/1‑94 (MQ=60)

                                   ATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGT                                                           >  SRR4302542.1809332/1‑94 (MQ=60)

                                    TCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTT                                                          <  SRR4302542.6878659/94‑1 (MQ=60)

                                     CTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCGGGGCAGTAGAACTGCTCATGTGCCCTCCGGCGACGTT                                                          >  SRR4302542.1208974/1‑94 (MQ=60)

                                     CTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTA                                                         <  SRR4302542.4725188/94‑1 (MQ=60)

                                     CTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTA                                                         >  SRR4302542.7592969/1‑94 (MQ=60)

                                     CTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTA                                                         >  SRR4302542.3229294/1‑94 (MQ=60)

                                     CTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTA                                                         >  SRR4302542.4666378/1‑94 (MQ=60)

                                     CTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTA                                                         >  SRR4302542.7282537/1‑94 (MQ=60)

                                      TCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTAT                                                        <  SRR4302542.6629609/94‑1 (MQ=60)

                                       CACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATT                                                       >  SRR4302542.391509/1‑94 (MQ=60)

                                       CACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATT                                                       >  SRR4302542.5861892/1‑94 (MQ=60)

                                       CACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATT                                                       >  SRR4302542.5364502/1‑94 (MQ=60)

                                        ACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTG                                                      <  SRR4302542.4238828/94‑1 (MQ=60)

                                         CAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGT                                                     >  SRR4302542.5060763/1‑94 (MQ=60)

                                         CAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGT                                                     <  SRR4302542.2238504/94‑1 (MQ=60)

                                         CAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGT                                                     >  SRR4302542.3570999/1‑94 (MQ=60)

                                           ATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCT                                                   >  SRR4302542.135692/1‑94 (MQ=60)

                                           ATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCT                                                   <  SRR4302542.5070941/94‑1 (MQ=60)

                                            TATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTG                                                  <  SRR4302542.1401171/94‑1 (MQ=60)

                                            TATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTG                                                  <  SRR4302542.7596644/94‑1 (MQ=60)

                                            TATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTG                                                  >  SRR4302542.1232294/1‑94 (MQ=60)

                                            TATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTG                                                  >  SRR4302542.3457591/1‑94 (MQ=60)

                                              TCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGAT                                                <  SRR4302542.2017087/94‑1 (MQ=60)

                                              TCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGAT                                                <  SRR4302542.68840/94‑1 (MQ=60)

                                                GGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGT                                              >  SRR4302542.2147282/1‑94 (MQ=60)

                                                 GGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTT                                             >  SRR4302542.841197/1‑94 (MQ=60)

                                                 GGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTT                                             >  SRR4302542.2004513/1‑94 (MQ=60)

                                                 GGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTT                                             <  SRR4302542.5282464/94‑1 (MQ=60)

                                                  GAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTG                                            <  SRR4302542.2291733/94‑1 (MQ=60)

                                                     ATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAAC                                         >  SRR4302542.2864139/1‑94 (MQ=60)

                                                     ATTAACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCATACGGCGACGTTATTGTCTGATGTTGAAC                                         >  SRR4302542.2739431/1‑94 (MQ=60)

                                                      TTCACTGGGTTTTCATGGTGTCATGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACC                                        >  SRR4302542.4582232/1‑94 (MQ=60)

                                                      TTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACC                                        <  SRR4302542.874856/94‑1 (MQ=60)

                                                      TTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACC                                        <  SRR4302542.874999/94‑1 (MQ=60)

                                                        CACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCA                                      >  SRR4302542.6655664/1‑94 (MQ=60)

                                                         ACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCAT                                     >  SRR4302542.7456272/1‑94 (MQ=60)

                                                         ACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCAT                                     <  SRR4302542.6969755/94‑1 (MQ=60)

                                                         ACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCAT                                     >  SRR4302542.5284727/1‑94 (MQ=60)

                                                         ACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCAT                                     >  SRR4302542.5097489/1‑94 (MQ=60)

                                                         ACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCAT                                     >  SRR4302542.4000697/1‑94 (MQ=60)

                                                          CTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATT                                    >  SRR4302542.5493498/1‑94 (MQ=60)

                                                          CTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATT                                    <  SRR4302542.4106391/94‑1 (MQ=60)

                                                          CTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATT                                    >  SRR4302542.2355339/1‑94 (MQ=60)

                                                          CTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATT                                    >  SRR4302542.4449450/1‑94 (MQ=60)

                                                           TGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTG                                   <  SRR4302542.1628726/94‑1 (MQ=60)

                                                           TGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTG                                   >  SRR4302542.3344321/1‑94 (MQ=60)

                                                            GGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGA                                  <  SRR4302542.925015/94‑1 (MQ=60)

                                                            GGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGA                                  >  SRR4302542.3726030/1‑94 (MQ=60)

                                                            GGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGA                                  >  SRR4302542.7593192/1‑94 (MQ=60)

                                                             GGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAG                                 >  SRR4302542.927341/1‑94 (MQ=60)

                                                             GGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAG                                 <  SRR4302542.2987290/94‑1 (MQ=60)

                                                               TTTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAA                               <  SRR4302542.7034592/94‑1 (MQ=60)

                                                                TTTCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAAT                              <  SRR4302542.6742468/94‑1 (MQ=60)

                                                                 TTCATGGTGTCACGCTCCTGGTATTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATC                             >  SRR4302542.6454566/1‑94 (MQ=60)

                                                                  TCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCT                            <  SRR4302542.3103523/94‑1 (MQ=60)

                                                                  TCATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCT                            <  SRR4302542.937116/94‑1 (MQ=60)

                                                                   CATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTG                           <  SRR4302542.2456344/94‑1 (MQ=60)

                                                                   CATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTG                           <  SRR4302542.3844872/94‑1 (MQ=60)

                                                                   CATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTG                           >  SRR4302542.505336/1‑94 (MQ=60)

                                                                    ATGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGG                          >  SRR4302542.4178807/1‑94 (MQ=60)

                                                                     TGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGT                         <  SRR4302542.1665300/94‑1 (MQ=60)

                                                                     TGGTGTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGT                         <  SRR4302542.3720063/94‑1 (MQ=60)

                                                                         GTCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAG                     <  SRR4302542.4842444/94‑1 (MQ=60)

                                                                          TCACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGA                    <  SRR4302542.6976627/94‑1 (MQ=60)

                                                                           CACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGAC                   >  SRR4302542.352186/1‑94 (MQ=60)

                                                                           CACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGAC                   <  SRR4302542.7243710/94‑1 (MQ=60)

                                                                           CACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGAC                   >  SRR4302542.1134125/1‑94 (MQ=60)

                                                                            ACGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACC                  <  SRR4302542.1047191/94‑1 (MQ=60)

                                                                             CGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCG                 >  SRR4302542.1040435/1‑94 (MQ=60)

                                                                             CGCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCG                 >  SRR4302542.3567630/1‑94 (MQ=60)

                                                                              GCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGT                >  SRR4302542.2789605/1‑94 (MQ=60)

                                                                              GCTCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGT                <  SRR4302542.7288283/94‑1 (MQ=60)

                                                                                TCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTAC              >  SRR4302542.3230565/1‑94 (MQ=60)

                                                                                TCCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTAC              <  SRR4302542.182878/94‑1 (MQ=60)

                                                                                TCCTGGTATTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCAATTGAGAATCTGGTCAAGACCGTAC              <  SRR4302542.3934025/94‑1 (MQ=60)

                                                                                 CCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACG             >  SRR4302542.3395108/1‑94 (MQ=60)

                                                                                 CCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACG             <  SRR4302542.6488977/94‑1 (MQ=60)

                                                                                 CCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACG             >  SRR4302542.3425190/1‑94 (MQ=60)

                                                                                 CCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACG             <  SRR4302542.4675194/94‑1 (MQ=60)

                                                                                 CCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACG             >  SRR4302542.2440839/1‑94 (MQ=60)

                                                                                 CCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACG             >  SRR4302542.1281252/1‑94 (MQ=60)

                                                                                 CCTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACG             >  SRR4302542.6920011/1‑94 (MQ=60)

                                                                                 CCTGGTATTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACG             >  SRR4302542.4149103/1‑94 (MQ=60)

                                                                                 CCTGGTATTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACG             <  SRR4302542.3282141/94‑1 (MQ=60)

                                                                                  CTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGT            <  SRR4302542.6497246/94‑1 (MQ=60)

                                                                                  CTGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGT            <  SRR4302542.6169890/94‑1 (MQ=60)

                                                                                   TGGTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTT           <  SRR4302542.1523677/94‑1 (MQ=60)

                                                                                    NNTATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTC          <  SRR4302542.362697/94‑1 (MQ=60)

                                                                                       ATTCCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGG       <  SRR4302542.718658/94‑1 (MQ=60)

                                                                                       ATTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGG       >  SRR4302542.5585803/1‑94 (MQ=60)

                                                                                       ATTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGG       >  SRR4302542.5778272/1‑94 (MQ=60)

                                                                                        TTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGC      <  SRR4302542.855631/94‑1 (MQ=60)

                                                                                          CCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAA    >  SRR4302542.2325637/1‑94 (MQ=60)

                                                                                          CCC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAA    <  SRR4302542.6633402/94‑1 (MQ=60)

                                                                                          CCC‑AGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAA    >  SRR4302542.3531042/1‑94 (MQ=60)

                                                                                           CC‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAAT   >  SRR4302542.5674870/1‑94 (MQ=60)

                                                                                           CC‑AGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAAT   >  SRR4302542.6771450/1‑94 (MQ=60)

                                                                                            C‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATA  >  SRR4302542.6905340/1‑94 (MQ=60)

                                                                                            C‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATA  >  SRR4302542.4264588/1‑94 (MQ=60)

                                                                                            C‑GGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATA  >  SRR4302542.3410649/1‑94 (MQ=60)

ATCCACGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCC‑AGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATA  >  NC_000913/4601239‑4601424

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`