Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,614,723 |
C→T |
intergenic (‑89/‑169) |
yjjI ← / → deoC |
hypothetical protein/2‑deoxyribose‑5‑phosphate aldolase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,614,723 | 0 | C | T | 89.2%
| 982.5
/ 66.7
| 314 | intergenic (‑89/‑169) | yjjI/deoC | hypothetical protein/2‑deoxyribose‑5‑phosphate aldolase |
| Reads supporting (aligned to +/- strand): ref base C (16/18); new base T (143/137); total (159/155) |
| Fisher's exact test for biased strand distribution p-value = 7.18e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.74e-01 |
Only 100 of 315 total aligned reads displayed.
GCATCTTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCGA > NC_000913/4614631‑4614813
|
aTCTTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGc > 1:1005757/1‑93 (MQ=255)
aTCTTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGc < 2:3517319/93‑1 (MQ=255)
aTCTTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGc > 2:5153083/1‑93 (MQ=255)
tcttctTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGca > 1:7280409/1‑93 (MQ=255)
tcttctTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGca < 2:2754209/93‑1 (MQ=255)
cttcttTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGACGcat < 2:4612365/93‑1 (MQ=255)
ttcttTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGACGcatt > 1:2098953/1‑93 (MQ=255)
cttTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGcattca < 2:7203440/93‑1 (MQ=255)
ttCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCAttt > 2:1813121/1‑93 (MQ=255)
tCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTg < 2:5384972/93‑1 (MQ=255)
tCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTg > 1:1718970/1‑93 (MQ=255)
ccTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGa > 1:45816/1‑93 (MQ=255)
cTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGaa < 2:1656418/93‑1 (MQ=255)
ttttATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGACGCATTCATTTGaaa < 2:2956885/93‑1 (MQ=255)
tttATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAg < 2:5659728/93‑1 (MQ=255)
tGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGaa < 1:124649/93‑1 (MQ=255)
tGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGaa < 1:2960469/93‑1 (MQ=255)
tGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGaa < 2:1192558/93‑1 (MQ=255)
gCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAat < 1:4936439/93‑1 (MQ=255)
gCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAat > 1:3169894/1‑93 (MQ=255)
gAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAattat > 2:3796091/1‑93 (MQ=255)
gAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAattat > 2:5433060/1‑93 (MQ=255)
gAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAattat > 2:1294043/1‑93 (MQ=255)
aGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGGTGCATTCATTTGAAAGTGAATTAttt > 1:4412245/1‑93 (MQ=255)
aGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTAttt < 1:6941686/93‑1 (MQ=255)
ggTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTg > 1:4787783/1‑93 (MQ=255)
gTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGa < 2:3166738/93‑1 (MQ=255)
gTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGa < 2:5287476/93‑1 (MQ=255)
tGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGaa < 2:3660302/93‑1 (MQ=255)
gATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAAc > 1:4237644/1‑93 (MQ=255)
aTGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAAcc > 1:329041/1‑93 (MQ=255)
gcgcCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAg > 1:7503438/1‑93 (MQ=255)
gcCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGAt > 2:4235140/1‑93 (MQ=255)
gcCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGAt < 1:6995107/93‑1 (MQ=255)
gcCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGAt < 2:854781/93‑1 (MQ=255)
tGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCAt < 2:5531156/93‑1 (MQ=255)
tGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCAt > 1:2250426/1‑93 (MQ=255)
tGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCAt < 2:1439931/93‑1 (MQ=255)
gTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCAtt > 1:6054135/1‑93 (MQ=255)
gTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCAtt > 1:1098173/1‑93 (MQ=255)
gTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCAtt > 2:5779035/1‑93 (MQ=255)
aagaagTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTAc < 2:2259455/93‑1 (MQ=255)
gaagTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAg < 1:6156268/93‑1 (MQ=255)
gaagTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAg > 2:4111301/1‑93 (MQ=255)
gaagTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAg < 1:6462115/93‑1 (MQ=255)
gaagTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAg > 2:3298590/1‑93 (MQ=255)
aagTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGt < 1:5391096/93‑1 (MQ=255)
gTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGa < 1:1979076/93‑1 (MQ=255)
tttCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGAt < 1:401897/93‑1 (MQ=255)
tttCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGAt < 2:5948816/93‑1 (MQ=255)
tttCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGAt > 2:186360/1‑93 (MQ=255)
tCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGc < 2:5635229/93‑1 (MQ=255)
tCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGc > 1:1168422/1‑93 (MQ=255)
tCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGc < 2:4850070/93‑1 (MQ=255)
tGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCaaa > 1:4648915/1‑93 (MQ=255)
tGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCaaa > 2:1729949/1‑93 (MQ=255)
tGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCaaa > 1:238360/1‑93 (MQ=255)
tGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCaaa > 1:3724393/1‑93 (MQ=255)
tGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCaaa < 1:7177857/93‑1 (MQ=255)
gATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAAc > 2:6092918/1‑93 (MQ=255)
gATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAAc > 1:6219981/1‑93 (MQ=255)
aTGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACt > 2:4576131/1‑93 (MQ=255)
tGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACtt > 1:1527767/1‑93 (MQ=255)
tGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACtt > 2:3589497/1‑93 (MQ=255)
tGTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACtt > 1:3209342/1‑93 (MQ=255)
gTTCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTg < 2:7221167/93‑1 (MQ=255)
ttCACTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGt > 1:6373378/1‑93 (MQ=255)
aCTTTGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAg > 2:3995325/1‑93 (MQ=255)
ttGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAg < 1:7364483/93‑1 (MQ=255)
ttGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAg > 1:3818565/1‑93 (MQ=255)
tGATCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGa > 2:2182283/1‑93 (MQ=255)
tCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGAttt > 1:3420260/1‑93 (MQ=255)
tCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGAttt < 2:6737229/93‑1 (MQ=255)
tCCTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGAttt > 1:26854/1‑93 (MQ=255)
tCCTGATGCGTTTGCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGAttt < 1:5331415/93‑1 (MQ=255)
ccTGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTc < 1:1639098/93‑1 (MQ=255)
tGATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCt < 1:2545098/93‑1 (MQ=255)
gATGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCtt < 2:3365010/93‑1 (MQ=255)
gATGCGTTTGCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCtt > 2:6878531/1‑93 (MQ=255)
gATGCGTTTGCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCtt < 1:3630801/93‑1 (MQ=255)
aTGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTa < 2:2115245/93‑1 (MQ=255)
aTGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTa > 2:4873667/1‑93 (MQ=255)
aTGCGTTTGCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTa > 1:1619272/1‑93 (MQ=255)
tGCGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTaa > 1:5777438/1‑93 (MQ=255)
cGTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAAtt < 1:284119/93‑1 (MQ=255)
gTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATtg < 2:4521344/93‑1 (MQ=255)
gTTTGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATtg > 1:95396/1‑93 (MQ=255)
ttGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATtgtg < 2:7484505/93‑1 (MQ=255)
ccaccaCTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGAtg < 2:6617129/93‑1 (MQ=255)
ccaccaCTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGAtg > 1:5116260/1‑93 (MQ=255)
accacTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGAtgtg < 2:6474609/93‑1 (MQ=255)
ccacTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATgtgt < 2:6147061/93‑1 (MQ=255)
ccacTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATgtgt > 2:7057284/1‑93 (MQ=255)
cacTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTa > 2:2820118/1‑93 (MQ=255)
cacTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTa < 2:7341837/93‑1 (MQ=255)
acTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTac > 1:4337239/1‑92 (MQ=255)
tGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCg > 2:339437/1‑93 (MQ=255)
tGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCg > 1:7072712/1‑93 (MQ=255)
tGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCg > 1:6897846/1‑93 (MQ=255)
tGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCg < 1:5933169/93‑1 (MQ=255)
|
GCATCTTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTTGCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCGA > NC_000913/4614631‑4614813
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGCATCTTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCGAAGT > NC_000913/4614630‑4614816
|
GGCATCTTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGAT < SRR4302542.595976/94‑1 (MQ=60)
GCATCTTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTGACTTTGATCCTGATGCGTTT‑GCCACCACTGATG < SRR4302542.7071847/94‑1 (MQ=60)
GCATCTTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATG > SRR4302542.2304014/1‑94 (MQ=60)
CATCTTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGC > SRR4302542.1014420/1‑94 (MQ=60)
ATCTTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCA > SRR4302542.1639592/1‑94 (MQ=60)
ATCTTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCA < SRR4302542.1681099/94‑1 (MQ=60)
ATCTTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCA > SRR4302542.4392438/1‑94 (MQ=60)
ATCTTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCA > SRR4302542.7351806/1‑94 (MQ=60)
ATCTTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCA > SRR4302542.1059715/1‑94 (MQ=60)
TCTTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCAT < SRR4302542.398814/94‑1 (MQ=60)
TCTTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCAT > SRR4302542.6851927/1‑94 (MQ=60)
CTTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATT > SRR4302542.7450240/1‑94 (MQ=60)
CTTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATT < SRR4302542.651608/94‑1 (MQ=60)
CTTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGACGCATT > SRR4302542.2117073/1‑94 (MQ=60)
TTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTC > SRR4302542.2194383/1‑94 (MQ=60)
TTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTC > SRR4302542.3119101/1‑94 (MQ=60)
TTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTC > SRR4302542.5545103/1‑94 (MQ=60)
TCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCA > SRR4302542.1230602/1‑94 (MQ=60)
TCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCA > SRR4302542.81127/1‑94 (MQ=60)
TCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGACGCATTCA < SRR4302542.6217802/94‑1 (MQ=60)
TTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATT > SRR4302542.2831575/1‑94 (MQ=60)
TTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTT < SRR4302542.6012458/94‑1 (MQ=60)
TTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTT < SRR4302542.309173/94‑1 (MQ=60)
TTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTT > SRR4302542.1442196/1‑94 (MQ=60)
TTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTG > SRR4302542.4395889/1‑94 (MQ=60)
TTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTG > SRR4302542.1733896/1‑94 (MQ=60)
TTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTG > SRR4302542.1175903/1‑94 (MQ=60)
TTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTG < SRR4302542.3201119/94‑1 (MQ=60)
TTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTG < SRR4302542.2898302/94‑1 (MQ=60)
TTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTG < SRR4302542.3553357/94‑1 (MQ=60)
TCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGA > SRR4302542.46203/1‑94 (MQ=60)
CCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAA > SRR4302542.2351506/1‑94 (MQ=60)
TATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGA < SRR4302542.6525169/94‑1 (MQ=60)
TATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTCA < SRR4302542.830664/94‑1 (MQ=60)
TGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAAT < SRR4302542.2988840/94‑1 (MQ=60)
TGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAAT > SRR4302542.3199962/1‑94 (MQ=60)
TGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAAT < SRR4302542.1578716/94‑1 (MQ=60)
TGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAAT < SRR4302542.125666/94‑1 (MQ=60)
GCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATT < SRR4302542.4984421/94‑1 (MQ=60)
GAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATT > SRR4302542.5657322/1‑94 (MQ=60)
acgctggtgagctgttgtgatAAGTTTCGTGATGTTCACGTTGATCCGGATGCGTTT‑GCCAGCCCTGAAGCATTCATTTGAAAGTGAATGATTT < SRR4302542.3286224/73‑1 (MQ=50)
AAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGGTGCATTCATTTGAAAGTGAATTATTT > SRR4302542.4455572/1‑94 (MQ=60)
AAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTT > SRR4302542.4996375/1‑94 (MQ=60)
AGGTGATGCGCCGTTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTG < SRR4302542.7009889/94‑1 (MQ=60)
AGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTG > SRR4302542.5246955/1‑94 (MQ=60)
AGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTG < SRR4302542.7009890/94‑1 (MQ=60)
AGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTG < SRR4302542.3610282/94‑1 (MQ=60)
AGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTG > SRR4302542.4834447/1‑94 (MQ=60)
GGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGA > SRR4302542.3232336/1‑94 (MQ=60)
GGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGA < SRR4302542.3737006/94‑1 (MQ=60)
GTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAA < SRR4302542.195116/94‑1 (MQ=60)
TGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAAC > SRR4302542.4279376/1‑94 (MQ=60)
TGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAAC > SRR4302542.708475/1‑94 (MQ=60)
GATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACC < SRR4302542.5417243/94‑1 (MQ=60)
GATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACC > SRR4302542.331902/1‑94 (MQ=60)
ATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCA > SRR4302542.6090940/1‑94 (MQ=60)
ATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCA < SRR4302542.1294666/94‑1 (MQ=60)
TGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAG < SRR4302542.464703/94‑1 (MQ=60)
TGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAG < SRR4302542.5391816/94‑1 (MQ=60)
TGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAG > SRR4302542.7577240/1‑94 (MQ=60)
CGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGAT < SRR4302542.2170703/94‑1 (MQ=60)
GCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATC < SRR4302542.7063832/94‑1 (MQ=60)
GCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATC < SRR4302542.4242125/94‑1 (MQ=60)
CCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCG > SRR4302542.3321383/1‑94 (MQ=60)
CCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCG < SRR4302542.6163149/94‑1 (MQ=60)
CATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGC > SRR4302542.4597928/1‑94 (MQ=60)
CATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGC > SRR4302542.7377914/1‑94 (MQ=60)
ATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCA > SRR4302542.5090867/1‑94 (MQ=60)
TTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCAT > SRR4302542.1166331/1‑94 (MQ=60)
TTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCAT > SRR4302542.5509150/1‑94 (MQ=60)
TTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCAT > SRR4302542.2269777/1‑94 (MQ=60)
TTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCAT > SRR4302542.1595926/1‑94 (MQ=60)
TGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATT > SRR4302542.6112734/1‑94 (MQ=60)
TGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATT > SRR4302542.1107581/1‑94 (MQ=60)
GTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTA > SRR4302542.7209709/1‑94 (MQ=60)
GTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTA < SRR4302542.16411/94‑1 (MQ=60)
GTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTA < SRR4302542.7112736/94‑1 (MQ=60)
TAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTAC > SRR4302542.2568579/1‑94 (MQ=60)
AAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACA < SRR4302542.6312573/94‑1 (MQ=60)
AAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACA > SRR4302542.7179155/1‑94 (MQ=60)
AAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACA > SRR4302542.331095/1‑94 (MQ=60)
AGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAG > SRR4302542.1767245/1‑94 (MQ=60)
AGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAG > SRR4302542.2369129/1‑94 (MQ=60)
GAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGT < SRR4302542.6525782/94‑1 (MQ=60)
GAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGT < SRR4302542.6215878/94‑1 (MQ=60)
AAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTG < SRR4302542.5178223/94‑1 (MQ=60)
AAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTG < SRR4302542.2673908/94‑1 (MQ=60)
AAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTG < SRR4302542.5443458/94‑1 (MQ=60)
AAGTTTCGTGATGTTCACTTTGACCCTGATGCGTTT‑GCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTG > SRR4302542.6442231/1‑94 (MQ=60)
GTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGAT < SRR4302542.1996166/94‑1 (MQ=60)
GTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGAT > SRR4302542.3413333/1‑94 (MQ=60)
TTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATG < SRR4302542.6703733/94‑1 (MQ=60)
TTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATG < SRR4302542.405368/94‑1 (MQ=60)
TTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGC > SRR4302542.1178509/1‑94 (MQ=60)
TCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCA > SRR4302542.2084595/1‑94 (MQ=60)
GTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAA > SRR4302542.4694369/1‑94 (MQ=60)
GTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAA > SRR4302542.3761274/1‑94 (MQ=60)
GTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAA > SRR4302542.240410/1‑94 (MQ=60)
GTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAA > SRR4302542.4707560/1‑94 (MQ=60)
TGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAAC > SRR4302542.6281237/1‑94 (MQ=60)
TGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAAC < SRR4302542.7248265/94‑1 (MQ=60)
TGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAAC < SRR4302542.5839145/94‑1 (MQ=60)
ATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTT < SRR4302542.7058326/94‑1 (MQ=60)
ATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTT > SRR4302542.4864532/1‑94 (MQ=60)
ATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTT < SRR4302542.7345306/94‑1 (MQ=60)
ATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTT > SRR4302542.3239730/1‑94 (MQ=60)
ATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTT > SRR4302542.1540954/1‑94 (MQ=60)
TGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTG < SRR4302542.2848496/94‑1 (MQ=60)
GTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGT > SRR4302542.3767921/1‑94 (MQ=60)
GTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGT > SRR4302542.6436139/1‑94 (MQ=60)
TCACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAA > SRR4302542.3768282/1‑94 (MQ=60)
CACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAG < SRR4302542.2780145/94‑1 (MQ=60)
CACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAG > SRR4302542.1066625/1‑94 (MQ=60)
CACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAG > SRR4302542.7294943/1‑94 (MQ=60)
CACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAG < SRR4302542.4370983/94‑1 (MQ=60)
ACTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGT > SRR4302542.7023551/1‑94 (MQ=60)
CTTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTA > SRR4302542.5875403/1‑94 (MQ=60)
TTTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAG > SRR4302542.3856333/1‑94 (MQ=60)
TTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGA < SRR4302542.3700771/94‑1 (MQ=60)
TTGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGA < SRR4302542.7436618/94‑1 (MQ=60)
TGGTCCTTATGCGTTTGGCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGA < SRR4302542.6233142/94‑1 (MQ=60)
TGATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGAT < SRR4302542.3876685/94‑1 (MQ=60)
GATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATT < SRR4302542.7488420/94‑1 (MQ=60)
GATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATT > SRR4302542.4779594/1‑94 (MQ=60)
ATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTT > SRR4302542.483067/1‑94 (MQ=60)
ATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTT > SRR4302542.3452303/1‑94 (MQ=60)
ATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTT > SRR4302542.27089/1‑94 (MQ=60)
ATCCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTT > SRR4302542.4617242/1‑94 (MQ=60)
ATCCTGATGCGTTT‑GCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTT < SRR4302542.3351921/94‑1 (MQ=60)
ATCCTGATGCGTTT‑GCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTT < SRR4302542.4092280/94‑1 (MQ=60)
TCCTGATGCGTTT‑GCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTC < SRR4302542.5383216/94‑1 (MQ=60)
CCTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCC < SRR4302542.1653261/94‑1 (MQ=60)
CTGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCT > SRR4302542.6407059/1‑94 (MQ=60)
CTGATGCGTTT‑GCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCT > SRR4302542.3601658/1‑94 (MQ=60)
CTGATGCGTTT‑GCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCT > SRR4302542.4318031/1‑94 (MQ=60)
TGATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTT < SRR4302542.2569765/94‑1 (MQ=60)
TGATGCGTTT‑GCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTT > SRR4302542.7434324/1‑94 (MQ=60)
GATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTA > SRR4302542.2622292/1‑94 (MQ=60)
GATGCGTTT‑GCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTA > SRR4302542.1633259/1‑94 (MQ=60)
GATGCGTTT‑GCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTA < SRR4302542.3664628/94‑1 (MQ=60)
ATGCGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAA > SRR4302542.5833526/1‑94 (MQ=60)
NNTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTG < SRR4302542.2031473/94‑1 (MQ=60)
CGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTG > SRR4302542.96206/1‑94 (MQ=60)
CGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTG < SRR4302542.2957771/94‑1 (MQ=60)
CGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTG < SRR4302542.286593/94‑1 (MQ=60)
CGTTT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTG > SRR4302542.4681225/1‑94 (MQ=60)
TT‑GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGA > SRR4302542.1216631/1‑94 (MQ=60)
GCCACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATG > SRR4302542.5165950/1‑94 (MQ=60)
ACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGT < SRR4302542.697624/94‑1 (MQ=60)
ACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGT > SRR4302542.6165138/1‑94 (MQ=60)
ACCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGT < SRR4302542.1687072/94‑1 (MQ=60)
CCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTA > SRR4302542.1691638/1‑94 (MQ=60)
CCACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTA > SRR4302542.254616/1‑94 (MQ=60)
CACTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTAC > SRR4302542.4379856/1‑94 (MQ=60)
CACTGATGCATTCATTTGAAAGTGAATTATTTGAAACAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTAT > SRR4302542.7425914/1‑94 (MQ=60)
CTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCG > SRR4302542.6965578/1‑94 (MQ=60)
CTGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCG > SRR4302542.7142121/1‑94 (MQ=60)
TGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCGA < SRR4302542.5990648/94‑1 (MQ=60)
TGATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCGA > SRR4302542.3662995/1‑94 (MQ=60)
TGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCGA < SRR4302542.4556285/94‑1 (MQ=60)
ATGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCGAAG > SRR4302542.27770/1‑94 (MQ=60)
TGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCGAAGT > SRR4302542.3624538/1‑94 (MQ=60)
TGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCGAAGT < SRR4302542.3212257/94‑1 (MQ=60)
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GGCATCTTCTTTTCCTTTTATGCCGAAGGTGATGCGCCATTGTAAGAAGTTTCGTGATGTTCACTTTGATCCTGATGCGTTT‑GCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCGAAGT > NC_000913/4614630‑4614816
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
