Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,618,604 |
T→C |
G51G (GGT→GGC) |
deoD → |
purine‑nucleoside phosphorylase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,618,604 | 0 | T | C | 86.0%
| 551.3
/ 75.3
| 228 | G51G (GGT→GGC) | deoD | purine‑nucleoside phosphorylase |
| Reads supporting (aligned to +/- strand): ref base T (11/21); new base C (84/112); total (95/133) |
| Fisher's exact test for biased strand distribution p-value = 4.41e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.24e-01 |
Only 100 of 229 total aligned reads displayed.
GGCGACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATTTCG > NC_000913/4618512‑4618695
|
ggCGACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGt > 2:3776097/1‑93 (MQ=255)
cGACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCAc < 2:1357024/93‑1 (MQ=255)
gACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACt > 2:2809836/1‑93 (MQ=255)
aCCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACtt < 2:4644978/93‑1 (MQ=255)
ccGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTAc > 1:1844050/1‑93 (MQ=255)
gCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACaa > 1:4367999/1‑93 (MQ=255)
cTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACaaa < 1:6514855/93‑1 (MQ=255)
cTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACaaa < 1:4950821/93‑1 (MQ=255)
tgcgtgcgAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAg < 2:1047130/93‑1 (MQ=255)
cgtgcgAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGc < 1:1717634/93‑1 (MQ=255)
cgtgcgAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGc < 2:6259391/93‑1 (MQ=255)
cgtgcgAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGc < 1:2654748/93‑1 (MQ=255)
aaGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCaaa > 2:5348233/1‑93 (MQ=255)
aaGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCaaa > 2:2603371/1‑93 (MQ=255)
aGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCaaaa < 2:5809045/93‑1 (MQ=255)
aGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCaaaa > 2:7442557/1‑93 (MQ=255)
gTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAAt > 1:785941/1‑93 (MQ=255)
atatTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAAttt > 1:5812604/1‑93 (MQ=255)
atatTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAAttt > 2:5486741/1‑93 (MQ=255)
atatTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAAttt < 1:1150599/93‑1 (MQ=255)
tatTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTc < 2:4574874/93‑1 (MQ=255)
ttGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCg > 1:2172920/1‑93 (MQ=255)
tGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGt < 2:3997207/93‑1 (MQ=255)
gCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTa > 1:4091745/1‑93 (MQ=255)
gCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTa < 2:3146825/93‑1 (MQ=255)
gCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTa > 1:4673704/1‑93 (MQ=255)
cTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTaa > 2:1287504/1‑93 (MQ=255)
cTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTaa < 1:1934019/93‑1 (MQ=255)
cTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTaa < 2:6879380/93‑1 (MQ=255)
tGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAAt < 2:7183060/93‑1 (MQ=255)
tGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAAt < 1:3365158/93‑1 (MQ=255)
tGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAAt > 1:6399849/1‑93 (MQ=255)
tGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAAt < 2:5937757/93‑1 (MQ=255)
tGAAACATTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAAt > 2:4771393/1‑93 (MQ=255)
gAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATg > 1:6050968/1‑93 (MQ=255)
gAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATg > 1:4041334/1‑93 (MQ=255)
gAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATg > 1:5412479/1‑93 (MQ=255)
gAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATg < 1:709434/93‑1 (MQ=255)
aaaCTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATgg < 2:1024860/93‑1 (MQ=255)
aaCTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATggg < 2:3949883/93‑1 (MQ=255)
aaCTTTCCTTGAAGACGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATggg > 2:1621202/1‑93 (MQ=255)
aCTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGt < 1:7131150/93‑1 (MQ=255)
tttCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCa < 2:3852292/93‑1 (MQ=255)
tttCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCa > 2:3343035/1‑93 (MQ=255)
tttCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCa < 1:1997533/93‑1 (MQ=255)
tCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACg < 1:529272/93‑1 (MQ=255)
ccTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACgg > 2:7343436/1‑93 (MQ=255)
ttGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTa < 1:3694848/93‑1 (MQ=255)
ttGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTa > 2:60458/1‑93 (MQ=255)
gAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATg < 1:1096368/93‑1 (MQ=255)
gAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATg < 2:4264624/93‑1 (MQ=255)
aaGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATgg > 2:1460176/1‑93 (MQ=255)
aaGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATgg < 1:1533390/93‑1 (MQ=255)
aGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATggg < 2:5205305/93‑1 (MQ=255)
aGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATggg > 2:2880635/1‑93 (MQ=255)
gATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGt < 1:3540021/93‑1 (MQ=255)
aTGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTa < 2:4086603/93‑1 (MQ=255)
tGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTAt > 2:5108013/1‑93 (MQ=255)
cccGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATcc > 2:6494562/1‑93 (MQ=255)
cccGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATcc < 1:6472626/93‑1 (MQ=255)
ccGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATccc > 2:1969018/1‑93 (MQ=255)
cGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCg > 2:3653657/1‑93 (MQ=255)
tgaagtgaaCAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTc < 1:3856953/93‑1 (MQ=255)
gaagtgaaCAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTcc < 1:4316828/93‑1 (MQ=255)
aagtgaaCAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCt < 1:3028034/93‑1 (MQ=255)
aagtgaaCAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCt < 1:563305/93‑1 (MQ=255)
gtgaaCAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGc > 1:6233589/1‑93 (MQ=255)
gtgaaCAACGTTCGCGGTATGCTGGGCTTCACCGGCACTGACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGc > 1:7509277/1‑93 (MQ=255)
gaaCAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTc > 2:6848767/1‑93 (MQ=255)
gaaCAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTc > 2:4431845/1‑93 (MQ=255)
acaacGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCa < 2:1754795/93‑1 (MQ=255)
aacGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATc < 1:2600086/93‑1 (MQ=255)
aacGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATc < 1:6023703/93‑1 (MQ=255)
acGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCt < 2:3054652/93‑1 (MQ=255)
acGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCt > 2:6587139/1‑93 (MQ=255)
acGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCt > 1:1470374/1‑93 (MQ=255)
acGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCt < 2:2125192/93‑1 (MQ=255)
acGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCt > 1:4490631/1‑93 (MQ=255)
cGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTa < 2:7230594/93‑1 (MQ=255)
gTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTac < 2:5660287/93‑1 (MQ=255)
gTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTac > 2:4902621/1‑93 (MQ=255)
ttCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTaca < 2:6613615/93‑1 (MQ=255)
cgGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCaa < 1:7390994/93‑1 (MQ=255)
ggTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCaaa > 2:6413267/1‑93 (MQ=255)
gTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAg > 1:4144294/1‑93 (MQ=255)
tGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAAc < 2:2631334/93‑1 (MQ=255)
tGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAAc < 1:5961847/93‑1 (MQ=255)
gCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACt < 1:1701597/93‑1 (MQ=255)
gCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACt > 1:398045/1‑93 (MQ=255)
cTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTg < 2:1499006/93‑1 (MQ=255)
gggCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGAt < 2:3755554/93‑1 (MQ=255)
gggCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGAt < 1:2452405/93‑1 (MQ=255)
cTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCAc < 2:4476723/93‑1 (MQ=255)
cTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCAc < 2:6279091/93‑1 (MQ=255)
ttCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCAcc > 2:1157854/1‑93 (MQ=255)
aCCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGAt < 2:2401131/93‑1 (MQ=255)
aCCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGAt > 1:630355/1‑93 (MQ=255)
ccGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGAtt < 1:891545/93‑1 (MQ=255)
cGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGAttt > 1:97209/1‑93 (MQ=255)
gTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATTTCg < 1:5191021/93‑1 (MQ=255)
|
GGCGACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATTTCG > NC_000913/4618512‑4618695
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGGCGACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATTTCGG > NC_000913/4618511‑4618696
|
AGGCGACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGC > SRR4302542.2666671/1‑94 (MQ=60)
AGGCGACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGC > SRR4302542.1792040/1‑94 (MQ=60)
AGGCGACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGC < SRR4302542.6775657/94‑1 (MQ=60)
CGACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACT < SRR4302542.1818010/94‑1 (MQ=60)
CGACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACT < SRR4302542.788426/94‑1 (MQ=60)
CCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTAC > SRR4302542.1860008/1‑94 (MQ=60)
CCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTAC < SRR4302542.837014/94‑1 (MQ=60)
CCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTAC > SRR4302542.1617912/1‑94 (MQ=60)
CGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAA > SRR4302542.4410876/1‑94 (MQ=60)
CTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAG < SRR4302542.4998919/94‑1 (MQ=60)
CTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAG < SRR4302542.6579058/94‑1 (MQ=60)
TGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGG < SRR4302542.6530283/94‑1 (MQ=60)
CGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCC < SRR4302542.1732550/94‑1 (MQ=60)
CGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCC < SRR4302542.2680382/94‑1 (MQ=60)
CGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCC < SRR4302542.5242557/94‑1 (MQ=60)
CGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAA > SRR4302542.3769054/1‑94 (MQ=60)
AAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAA > SRR4302542.1865473/1‑94 (MQ=60)
AGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAAT < SRR4302542.6255528/94‑1 (MQ=60)
AGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAAT > SRR4302542.792716/1‑94 (MQ=60)
GTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATT > SRR4302542.6066951/1‑94 (MQ=60)
TATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTT > SRR4302542.5869006/1‑94 (MQ=60)
TATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTT < SRR4302542.4697965/94‑1 (MQ=60)
ATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTC < SRR4302542.1160457/94‑1 (MQ=60)
TATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCC > SRR4302542.4224585/1‑94 (MQ=60)
ATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCG > SRR4302542.2191622/1‑94 (MQ=60)
ATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCG < SRR4302542.4565916/94‑1 (MQ=60)
TTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGT < SRR4302542.4835515/94‑1 (MQ=60)
TGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAATGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTA > SRR4302542.253098/1‑94 (MQ=60)
TGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTA < SRR4302542.5896069/94‑1 (MQ=60)
TGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTA > SRR4302542.6377609/1‑94 (MQ=60)
TGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTA < SRR4302542.4086975/94‑1 (MQ=60)
TGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTA < SRR4302542.3214461/94‑1 (MQ=60)
TGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTA > SRR4302542.4132104/1‑94 (MQ=60)
TGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTA > SRR4302542.4719373/1‑94 (MQ=60)
TGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTA < SRR4302542.3730855/94‑1 (MQ=60)
CTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAAT > SRR4302542.6462911/1‑94 (MQ=60)
CTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAAT < SRR4302542.1950724/94‑1 (MQ=60)
TGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATG > SRR4302542.6109533/1‑94 (MQ=60)
TGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATG > SRR4302542.4081208/1‑94 (MQ=60)
TGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATG > SRR4302542.5465046/1‑94 (MQ=60)
TGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATG < SRR4302542.3396763/94‑1 (MQ=60)
TGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATG > SRR4302542.1867230/1‑94 (MQ=60)
GAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGG < SRR4302542.715559/94‑1 (MQ=60)
GAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGG > SRR4302542.881520/1‑94 (MQ=60)
GAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGG < SRR4302542.1732513/94‑1 (MQ=60)
ACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTC > SRR4302542.4509965/1‑94 (MQ=60)
ACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTC < SRR4302542.7201136/94‑1 (MQ=60)
TTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCAC < SRR4302542.2014767/94‑1 (MQ=60)
TCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGG < SRR4302542.4379210/94‑1 (MQ=60)
TCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGG < SRR4302542.533847/94‑1 (MQ=60)
CCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGT < SRR4302542.5931426/94‑1 (MQ=60)
CCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGT < SRR4302542.2242683/94‑1 (MQ=60)
CTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTA > SRR4302542.6718528/1‑94 (MQ=60)
TTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTAT < SRR4302542.5363824/94‑1 (MQ=60)
TTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTAT < SRR4302542.3731410/94‑1 (MQ=60)
GAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGG < SRR4302542.1150616/94‑1 (MQ=60)
GAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGG < SRR4302542.1105758/94‑1 (MQ=60)
AAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGG < SRR4302542.1546635/94‑1 (MQ=60)
AAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGG < SRR4302542.4181694/94‑1 (MQ=60)
GATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTA < SRR4302542.6342430/94‑1 (MQ=60)
GATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTA < SRR4302542.3573099/94‑1 (MQ=60)
ATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTAT > SRR4302542.5595892/1‑94 (MQ=60)
TGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATC < SRR4302542.6231052/94‑1 (MQ=60)
TGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATC < SRR4302542.3082852/94‑1 (MQ=60)
TGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATC < SRR4302542.3484905/94‑1 (MQ=60)
GCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGTCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCC < SRR4302542.7373794/94‑1 (MQ=60)
CCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCC < SRR4302542.2534441/94‑1 (MQ=60)
CCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCC < SRR4302542.6536392/94‑1 (MQ=60)
CCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCC > SRR4302542.2095234/1‑94 (MQ=60)
CCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCG < SRR4302542.6545011/94‑1 (MQ=60)
CGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGT > SRR4302542.7504304/1‑94 (MQ=60)
TGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCC < SRR4302542.3895051/94‑1 (MQ=60)
GAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCT < SRR4302542.4359238/94‑1 (MQ=60)
AAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTG < SRR4302542.3056935/94‑1 (MQ=60)
AAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTG < SRR4302542.568156/94‑1 (MQ=60)
AGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGC > SRR4302542.1970879/1‑94 (MQ=60)
AGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGC > SRR4302542.2662596/1‑94 (MQ=60)
AGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGC > SRR4302542.6294962/1‑94 (MQ=60)
AGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTGACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGC > SRR4302542.7583131/1‑94 (MQ=60)
GTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCT < SRR4302542.4146421/94‑1 (MQ=60)
TGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTC > SRR4302542.5020549/1‑94 (MQ=60)
AACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCA < SRR4302542.5322210/94‑1 (MQ=60)
ACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCAT < SRR4302542.6086099/94‑1 (MQ=60)
ACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCAT < SRR4302542.1542764/94‑1 (MQ=60)
CAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATC > SRR4302542.960133/1‑94 (MQ=60)
AACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCT < SRR4302542.2625243/94‑1 (MQ=60)
AACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCT > SRR4302542.4534696/1‑94 (MQ=60)
AACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCT > SRR4302542.1483069/1‑94 (MQ=60)
AACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCT < SRR4302542.6082031/94‑1 (MQ=60)
GCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAA > SRR4302542.1597768/1‑94 (MQ=60)
CGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAA < SRR4302542.7463341/94‑1 (MQ=60)
GGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAG > SRR4302542.4185125/1‑94 (MQ=60)
GGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAG > SRR4302542.6523857/1‑94 (MQ=60)
GGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAG < SRR4302542.3967532/94‑1 (MQ=60)
ATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAAC > SRR4302542.5755217/1‑94 (MQ=60)
TGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACT > SRR4302542.401484/1‑94 (MQ=60)
TGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACT < SRR4302542.6019567/94‑1 (MQ=60)
TGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACT < SRR4302542.7219935/94‑1 (MQ=60)
GCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTG < SRR4302542.1716344/94‑1 (MQ=60)
GGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATC < SRR4302542.2476253/94‑1 (MQ=60)
GGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCA < SRR4302542.7179131/94‑1 (MQ=60)
GGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCA < SRR4302542.3901348/94‑1 (MQ=60)
CTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACC > SRR4302542.1299915/1‑94 (MQ=60)
CTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACC > SRR4302542.4043785/1‑94 (MQ=60)
TTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCG < SRR4302542.2858871/94‑1 (MQ=60)
CACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGAT > SRR4302542.635784/1‑94 (MQ=60)
CCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATTT < SRR4302542.899268/94‑1 (MQ=60)
CCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATTT > SRR4302542.98029/1‑94 (MQ=60)
GTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATTTCGG < SRR4302542.5241452/94‑1 (MQ=60)
GCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATTTCGG < SRR4302542.3632620/94‑1 (MQ=60)
GCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATTTCGG > SRR4302542.6817666/1‑94 (MQ=60)
|
AGGCGACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATTTCGG > NC_000913/4618511‑4618696
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
