Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTGCCGACGCGCTGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGATTCATCAGGTGAA > NC_000913/3299388‑3299574
|
GTGCCGACGCGCTGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTC > SRR4302542.2837715/1‑94 (MQ=60)
GTGCCGACGCGCTGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTC > SRR4302542.2441687/1‑94 (MQ=60)
TGCCGACGCGCTGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCG < SRR4302542.1347289/94‑1 (MQ=60)
GCCGACGCGCTGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGG < SRR4302542.4145176/94‑1 (MQ=60)
CCGACGCGCTGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGC < SRR4302542.7288496/94‑1 (MQ=60)
CCGACGCGCTGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGC < SRR4302542.617962/94‑1 (MQ=60)
CGACGCGCTGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCG < SRR4302542.4165406/94‑1 (MQ=60)
CGACGCGCTGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCG < SRR4302542.5255234/94‑1 (MQ=60)
CGACGCGCTGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCG < SRR4302542.7092225/94‑1 (MQ=60)
CGACGCGCTGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCG < SRR4302542.6774137/94‑1 (MQ=60)
GACGCGCTGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGA > SRR4302542.6728777/1‑94 (MQ=60)
GACGCGCTGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGA > SRR4302542.2919958/1‑94 (MQ=60)
CGCGCTGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACC < SRR4302542.4395690/94‑1 (MQ=60)
CGCTGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAA < SRR4302542.4384432/94‑1 (MQ=60)
CGCTGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAA < SRR4302542.6379188/94‑1 (MQ=60)
CGCTGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAA > SRR4302542.190675/1‑94 (MQ=60)
TGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGA > SRR4302542.4600667/1‑94 (MQ=60)
TGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGA > SRR4302542.5691359/1‑94 (MQ=60)
TGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGA < SRR4302542.1400936/94‑1 (MQ=60)
TGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGA < SRR4302542.5761209/94‑1 (MQ=60)
TGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGA < SRR4302542.3634331/94‑1 (MQ=60)
GATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAA > SRR4302542.3373795/1‑94 (MQ=60)
GATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAA < SRR4302542.3611918/94‑1 (MQ=60)
ATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAG < SRR4302542.6175123/94‑1 (MQ=60)
ATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAG < SRR4302542.3406089/94‑1 (MQ=60)
ATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAG < SRR4302542.3603159/94‑1 (MQ=60)
ATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAG < SRR4302542.7181546/94‑1 (MQ=60)
TCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGA < SRR4302542.7559500/94‑1 (MQ=60)
TCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGA < SRR4302542.1444830/94‑1 (MQ=60)
CCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAG < SRR4302542.4612483/94‑1 (MQ=60)
CCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAG < SRR4302542.2047548/94‑1 (MQ=60)
CCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAG < SRR4302542.4612482/94‑1 (MQ=60)
CCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAG > SRR4302542.2250342/1‑94 (MQ=60)
CCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAG < SRR4302542.7411641/94‑1 (MQ=60)
CCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAG < SRR4302542.2384739/94‑1 (MQ=60)
TCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGC < SRR4302542.2749509/94‑1 (MQ=60)
TCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGC < SRR4302542.727070/94‑1 (MQ=60)
TCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGC < SRR4302542.133613/94‑1 (MQ=60)
CGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCG < SRR4302542.502460/94‑1 (MQ=60)
CGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCG < SRR4302542.2120844/94‑1 (MQ=60)
CGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCG > SRR4302542.2403065/1‑94 (MQ=60)
CCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGAT > SRR4302542.3224643/1‑94 (MQ=60)
CGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATT > SRR4302542.7113456/1‑94 (MQ=60)
CGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATT < SRR4302542.2988968/94‑1 (MQ=60)
CGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATT > SRR4302542.5427796/1‑94 (MQ=60)
GACCTCGCCATGCTGGAGTACGCCGCCGAGCTTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTA < SRR4302542.4020749/94‑1 (MQ=60)
GACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTA < SRR4302542.551596/94‑1 (MQ=60)
GACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTA > SRR4302542.6777036/1‑94 (MQ=60)
CCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAAC < SRR4302542.2960582/94‑1 (MQ=60)
CTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACT > SRR4302542.6922254/1‑94 (MQ=60)
CTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACT > SRR4302542.1244365/1‑94 (MQ=60)
CTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACT < SRR4302542.1685419/94‑1 (MQ=60)
CTCGCCATGCTGGAGTACGCCGCCGAGCG‑TATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGGAGCGGTTAACTT > SRR4302542.3270263/1‑94 (MQ=60)
CGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTT < SRR4302542.1224889/94‑1 (MQ=60)
CGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTT > SRR4302542.6293313/1‑94 (MQ=60)
CGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTT < SRR4302542.1146791/94‑1 (MQ=60)
CGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTT > SRR4302542.6630490/1‑94 (MQ=60)
GCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTT < SRR4302542.7098441/94‑1 (MQ=60)
GCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTT < SRR4302542.3529906/94‑1 (MQ=60)
CATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTAT < SRR4302542.6466145/94‑1 (MQ=60)
CATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTAT > SRR4302542.2398950/1‑94 (MQ=60)
CATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTAT < SRR4302542.1818204/94‑1 (MQ=60)
ATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATC < SRR4302542.5114053/94‑1 (MQ=60)
TGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCA < SRR4302542.1766037/94‑1 (MQ=60)
TGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCA > SRR4302542.3143393/1‑94 (MQ=60)
TGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCA < SRR4302542.4259121/94‑1 (MQ=60)
TGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCA > SRR4302542.5248945/1‑94 (MQ=60)
GCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCAT > SRR4302542.1602237/1‑94 (MQ=60)
CTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATC < SRR4302542.3282235/94‑1 (MQ=60)
CTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATC < SRR4302542.2983731/94‑1 (MQ=60)
CTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATC < SRR4302542.1124059/94‑1 (MQ=60)
TGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCG < SRR4302542.1483906/94‑1 (MQ=60)
TGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCG < SRR4302542.3202705/94‑1 (MQ=60)
TGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCG > SRR4302542.7444429/1‑94 (MQ=60)
GGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGC > SRR4302542.2800989/1‑94 (MQ=60)
GAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCC < SRR4302542.3265207/94‑1 (MQ=60)
GAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCC < SRR4302542.5667378/94‑1 (MQ=60)
GAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCC < SRR4302542.2009149/94‑1 (MQ=60)
AGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCA > SRR4302542.1564130/1‑94 (MQ=60)
GTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCAT > SRR4302542.3643632/1‑94 (MQ=60)
GTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCAT < SRR4302542.2172345/94‑1 (MQ=60)
GTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCAT < SRR4302542.272100/94‑1 (MQ=60)
GTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCAT < SRR4302542.4579316/94‑1 (MQ=60)
ACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTT < SRR4302542.6084874/94‑1 (MQ=60)
GCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTG < SRR4302542.4026376/94‑1 (MQ=60)
GCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTG < SRR4302542.1736353/94‑1 (MQ=60)
GCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTG < SRR4302542.2961630/94‑1 (MQ=60)
GCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTG < SRR4302542.1106383/94‑1 (MQ=60)
GCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTG < SRR4302542.2369479/94‑1 (MQ=60)
CCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGA > SRR4302542.5375554/1‑94 (MQ=60)
CCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGA > SRR4302542.5650518/1‑94 (MQ=60)
CGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGAC < SRR4302542.5164938/94‑1 (MQ=60)
CGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGAC > SRR4302542.5130647/1‑94 (MQ=60)
GCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACG < SRR4302542.3310749/94‑1 (MQ=60)
GCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACG < SRR4302542.4232338/94‑1 (MQ=60)
CGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTT < SRR4302542.234996/94‑1 (MQ=60)
CGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTT > SRR4302542.5412271/1‑94 (MQ=60)
CGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTT > SRR4302542.2982156/1‑94 (MQ=60)
GAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTG < SRR4302542.3409337/94‑1 (MQ=60)
GAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTG < SRR4302542.3078896/94‑1 (MQ=60)
GAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTG > SRR4302542.5433700/1‑94 (MQ=60)
AGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGC > SRR4302542.1036885/1‑94 (MQ=60)
GCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCT < SRR4302542.3741261/94‑1 (MQ=60)
CGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTC < SRR4302542.2345601/94‑1 (MQ=60)
CGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGCCGGCCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTC > SRR4302542.1376055/1‑94 (MQ=60)
GTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCG > SRR4302542.556416/1‑94 (MQ=60)
TATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCG < SRR4302542.6192295/94‑1 (MQ=60)
TATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCG < SRR4302542.4636132/94‑1 (MQ=60)
ATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGGGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGT > SRR4302542.7125343/1‑94 (MQ=60)
ATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGT > SRR4302542.6817554/1‑94 (MQ=60)
CCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGG < SRR4302542.6465555/94‑1 (MQ=60)
CCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGG < SRR4302542.2036243/94‑1 (MQ=60)
CGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGT > SRR4302542.1587461/1‑94 (MQ=60)
CGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGT < SRR4302542.2677314/94‑1 (MQ=60)
CGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGT < SRR4302542.5579076/94‑1 (MQ=60)
GCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTG > SRR4302542.2786531/1‑94 (MQ=60)
GCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTG < SRR4302542.3654044/94‑1 (MQ=60)
CATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGC > SRR4302542.6753133/1‑94 (MQ=60)
ATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCT > SRR4302542.1882085/1‑94 (MQ=60)
TATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTG > SRR4302542.3591727/1‑94 (MQ=60)
ATTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGC > SRR4302542.6045578/1‑94 (MQ=60)
TTGAGCGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCGATTTTGACGTTGCTCGCGTGGTGCTGCC < SRR4302542.393894/94‑1 (MQ=60)
TGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCG > SRR4302542.92205/1‑94 (MQ=60)
TGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCG < SRR4302542.231942/94‑1 (MQ=60)
GAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGC < SRR4302542.2554328/94‑1 (MQ=60)
CGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCG > SRR4302542.6957979/1‑94 (MQ=60)
CGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCG > SRR4302542.6115331/1‑94 (MQ=60)
CGCCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCG > SRR4302542.1732306/1‑94 (MQ=60)
CCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTG > SRR4302542.5232952/1‑94 (MQ=60)
CCACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTG < SRR4302542.1582449/94‑1 (MQ=60)
CCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTG > SRR4302542.892761/1‑94 (MQ=60)
CACGTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGT < SRR4302542.6331820/94‑1 (MQ=60)
CACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGT > SRR4302542.5049826/1‑94 (MQ=60)
CACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGT > SRR4302542.990287/1‑94 (MQ=60)
ACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTT < SRR4302542.7233657/94‑1 (MQ=60)
CGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGCGCTGCAGCGCGTGTTG > SRR4302542.4355583/1‑94 (MQ=60)
GTATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGT > SRR4302542.4655052/1‑94 (MQ=60)
TATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTC < SRR4302542.5388670/94‑1 (MQ=60)
TATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTC < SRR4302542.2868115/94‑1 (MQ=60)
TATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTC > SRR4302542.7350127/1‑94 (MQ=60)
ATCGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCG > SRR4302542.4270608/1‑94 (MQ=60)
TCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGA > SRR4302542.1952917/1‑94 (MQ=60)
CGGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGAT < SRR4302542.4009227/94‑1 (MQ=60)
GGTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGATT > SRR4302542.6614382/1‑94 (MQ=60)
GGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGATT > SRR4302542.5751951/1‑94 (MQ=60)
GGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGATT < SRR4302542.7491676/94‑1 (MQ=60)
GTGCAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGATTC < SRR4302542.375222/94‑1 (MQ=60)
CAGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGATTCATC > SRR4302542.1100401/1‑94 (MQ=60)
AGGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGATTCATCA > SRR4302542.3552177/1‑94 (MQ=60)
AGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGATTCATCA > SRR4302542.6940799/1‑94 (MQ=60)
AGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGATTCATCA > SRR4302542.2052522/1‑94 (MQ=60)
GGCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGATTCATCAG < SRR4302542.7055748/94‑1 (MQ=60)
GGCTTTGGCGACCAATGAAGAGGCGATTAAATTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGATTCATCAG > SRR4302542.4624667/1‑94 (MQ=60)
GCTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGATTCATCAGG < SRR4302542.1817750/94‑1 (MQ=60)
GCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGATTCATCAGG < SRR4302542.5160767/94‑1 (MQ=60)
CTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGATTCATCAGGT > SRR4302542.4983279/1‑94 (MQ=60)
CTTTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGATTCATCAGGT > SRR4302542.5527711/1‑94 (MQ=60)
CTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGATTCATCAGGT > SRR4302542.2738832/1‑94 (MQ=60)
CTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGATTCATCAGGT < SRR4302542.2159310/94‑1 (MQ=60)
TTGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGATTCATCAGGTGA > SRR4302542.2499192/1‑94 (MQ=60)
TGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGATTCATCAGGTGAA < SRR4302542.728574/94‑1 (MQ=60)
CGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGATTCATCAGGTGAA > SRR4302542.1229813/1‑94 (MQ=60)
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GTGCCGACGCGCTGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGATTCATCAGGTGAA > NC_000913/3299388‑3299574
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
