Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGCCATTCGGGTCA > NC_000913/3334934‑3335119
|
ATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCT < SRR4302542.2081875/94‑1 (MQ=60)
ATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCT > SRR4302542.5097091/1‑94 (MQ=60)
TCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTC < SRR4302542.1157976/94‑1 (MQ=60)
TCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTC > SRR4302542.6333358/1‑94 (MQ=60)
TCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTC > SRR4302542.3451982/1‑94 (MQ=60)
TCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTC < SRR4302542.6480823/94‑1 (MQ=60)
CGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCA > SRR4302542.2248994/1‑94 (MQ=60)
CGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCA > SRR4302542.2507301/1‑94 (MQ=60)
CGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCA < SRR4302542.5813602/94‑1 (MQ=60)
GATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAG < SRR4302542.7476312/94‑1 (MQ=60)
ATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGC < SRR4302542.4769716/94‑1 (MQ=60)
ATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGC > SRR4302542.2769430/1‑94 (MQ=60)
ATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGC > SRR4302542.4330338/1‑94 (MQ=60)
TTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCA > SRR4302542.7248459/1‑94 (MQ=60)
TCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAAT < SRR4302542.6761978/94‑1 (MQ=60)
AGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCA > SRR4302542.6612424/1‑94 (MQ=60)
AGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCA > SRR4302542.6612425/1‑94 (MQ=60)
AGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCA > SRR4302542.3359533/1‑94 (MQ=60)
AGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCA > SRR4302542.3359538/1‑94 (MQ=60)
GTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCAT < SRR4302542.6909253/94‑1 (MQ=60)
GTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCAT < SRR4302542.6305291/94‑1 (MQ=60)
GCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTC < SRR4302542.5410301/94‑1 (MQ=60)
CGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCG > SRR4302542.4770192/1‑94 (MQ=60)
CGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCG < SRR4302542.6533989/94‑1 (MQ=60)
CGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCG > SRR4302542.2771654/1‑94 (MQ=60)
CGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCG < SRR4302542.1597661/94‑1 (MQ=60)
CGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCG < SRR4302542.6672671/94‑1 (MQ=60)
CGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCG > SRR4302542.2200832/1‑94 (MQ=60)
CGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCG < SRR4302542.7079565/94‑1 (MQ=60)
AGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAA > SRR4302542.4202952/1‑94 (MQ=60)
AGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTNN > SRR4302542.1601352/1‑94 (MQ=60)
AGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAA > SRR4302542.3930162/1‑94 (MQ=60)
AGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAA > SRR4302542.7270589/1‑94 (MQ=60)
AGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTCTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAA > SRR4302542.7193182/1‑94 (MQ=60)
GTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAG > SRR4302542.6620964/1‑94 (MQ=60)
GTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAG < SRR4302542.2782808/94‑1 (MQ=60)
TCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGC < SRR4302542.5026254/94‑1 (MQ=60)
CAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCC < SRR4302542.3557816/94‑1 (MQ=60)
CAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCC < SRR4302542.6597774/94‑1 (MQ=60)
CAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCC < SRR4302542.4661929/94‑1 (MQ=60)
AGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCT < SRR4302542.3868869/94‑1 (MQ=60)
AGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCT < SRR4302542.2598402/94‑1 (MQ=60)
AGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCT > SRR4302542.5534412/1‑94 (MQ=60)
GGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATCCTGACGCCTTCAGCAATCATGTCGTAAGCCTG < SRR4302542.4537144/94‑1 (MQ=60)
GGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTG < SRR4302542.7078815/94‑1 (MQ=60)
GGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTG < SRR4302542.3016308/94‑1 (MQ=60)
GGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTG < SRR4302542.6197755/94‑1 (MQ=60)
CCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCC > SRR4302542.2622858/1‑94 (MQ=60)
CCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCC > SRR4302542.7438740/1‑94 (MQ=60)
CGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCA > SRR4302542.4738314/1‑94 (MQ=60)
CGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCA < SRR4302542.5150280/94‑1 (MQ=60)
GTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAA > SRR4302542.825699/1‑94 (MQ=60)
TCGATCCCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATGCTGCCGCCCTCAGAAATCATGTCGTAAGCCTGCCAAT < SRR4302542.2088075/94‑1 (MQ=60)
CGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATT > SRR4302542.1827198/1‑94 (MQ=60)
CGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATT < SRR4302542.3929899/94‑1 (MQ=60)
CGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATT < SRR4302542.3639921/94‑1 (MQ=60)
GATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTG < SRR4302542.6021233/94‑1 (MQ=60)
GATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTG > SRR4302542.6488264/1‑94 (MQ=60)
GATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTG < SRR4302542.5349959/94‑1 (MQ=60)
ATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGC > SRR4302542.294599/1‑94 (MQ=60)
ATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGC > SRR4302542.5771412/1‑94 (MQ=60)
ATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGC > SRR4302542.5771413/1‑94 (MQ=60)
CCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCG < SRR4302542.7177655/94‑1 (MQ=60)
CCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCG < SRR4302542.5593023/94‑1 (MQ=60)
CCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCG < SRR4302542.7600338/94‑1 (MQ=60)
CTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGT > SRR4302542.2749759/1‑94 (MQ=60)
CTTTCGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGT > SRR4302542.1625485/1‑94 (MQ=60)
TTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTC < SRR4302542.1138805/94‑1 (MQ=60)
GGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGG < SRR4302542.1450225/94‑1 (MQ=60)
GTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGG < SRR4302542.4491542/94‑1 (MQ=60)
GTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGG < SRR4302542.2874106/94‑1 (MQ=60)
TACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACGGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGA < SRR4302542.2517970/94‑1 (MQ=60)
CGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGT > SRR4302542.364616/1‑94 (MQ=60)
CGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGT > SRR4302542.456735/1‑94 (MQ=60)
CGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGT > SRR4302542.4014903/1‑94 (MQ=60)
TAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTT > SRR4302542.1042224/1‑94 (MQ=60)
CAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTT > SRR4302542.6130789/1‑94 (MQ=60)
CAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTT > SRR4302542.1712490/1‑94 (MQ=60)
AGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTT > SRR4302542.1659328/1‑94 (MQ=60)
AGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTT > SRR4302542.6179498/1‑94 (MQ=60)
AGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTT > SRR4302542.3981167/1‑94 (MQ=60)
AGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTT > SRR4302542.1846451/1‑94 (MQ=60)
CAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTA < SRR4302542.3938211/94‑1 (MQ=60)
CAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTA < SRR4302542.6258861/94‑1 (MQ=60)
AGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTAC > SRR4302542.5876532/1‑94 (MQ=60)
AGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTAC < SRR4302542.415451/94‑1 (MQ=60)
AGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTAC > SRR4302542.6744737/1‑94 (MQ=60)
AGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTAC < SRR4302542.4431028/94‑1 (MQ=60)
CGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGC > SRR4302542.512510/1‑94 (MQ=60)
CGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGC > SRR4302542.3216206/1‑94 (MQ=60)
GTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCC > SRR4302542.428568/1‑94 (MQ=60)
GTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCC > SRR4302542.2225041/1‑94 (MQ=60)
GTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCC > SRR4302542.4429383/1‑94 (MQ=60)
GTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCC > SRR4302542.1166465/1‑94 (MQ=60)
CCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACT > SRR4302542.4887362/1‑94 (MQ=60)
CCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACT < SRR4302542.1088335/94‑1 (MQ=60)
CCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACT > SRR4302542.58379/1‑94 (MQ=60)
CCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACT < SRR4302542.5064372/94‑1 (MQ=60)
CCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTG > SRR4302542.5282146/1‑94 (MQ=60)
CCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGG > SRR4302542.5984486/1‑94 (MQ=60)
CCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGG < SRR4302542.1653818/94‑1 (MQ=60)
CACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGA > SRR4302542.4327857/1‑94 (MQ=60)
CACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGA > SRR4302542.6967783/1‑94 (MQ=60)
CACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGA > SRR4302542.111606/1‑94 (MQ=60)
CACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGA > SRR4302542.4316767/1‑94 (MQ=60)
ACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAA > SRR4302542.6149094/1‑94 (MQ=60)
ACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAA > SRR4302542.4652554/1‑94 (MQ=60)
ACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAA > SRR4302542.7399366/1‑94 (MQ=60)
ACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAA > SRR4302542.1154288/1‑94 (MQ=60)
ACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAA > SRR4302542.5147594/1‑94 (MQ=60)
ACTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAA > SRR4302542.7019720/1‑94 (MQ=60)
CTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAG < SRR4302542.2726002/94‑1 (MQ=60)
CTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAG > SRR4302542.216443/1‑94 (MQ=60)
CTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAG < SRR4302542.6763432/94‑1 (MQ=60)
CTCGTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAG < SRR4302542.1279624/94‑1 (MQ=60)
CGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTC > SRR4302542.3548225/1‑94 (MQ=60)
GTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCC < SRR4302542.1299192/94‑1 (MQ=60)
GTTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCC > SRR4302542.5863588/1‑94 (MQ=60)
TTTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAAACATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCA < SRR4302542.4033635/94‑1 (MQ=60)
TTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAG > SRR4302542.1009410/1‑94 (MQ=60)
TTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAG > SRR4302542.1879347/1‑94 (MQ=60)
TTTGTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAG < SRR4302542.5957785/94‑1 (MQ=60)
TTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGA < SRR4302542.2907089/94‑1 (MQ=60)
TTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGA < SRR4302542.4757568/94‑1 (MQ=60)
TGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGAC < SRR4302542.2148127/94‑1 (MQ=60)
GTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACG < SRR4302542.5801294/94‑1 (MQ=60)
GTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACG < SRR4302542.7485115/94‑1 (MQ=60)
GTTTGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACG < SRR4302542.2730422/94‑1 (MQ=60)
TGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCAC < SRR4302542.4014623/94‑1 (MQ=60)
TGGTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCAC > SRR4302542.1772686/1‑94 (MQ=60)
GTGGTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCG < SRR4302542.1010041/94‑1 (MQ=60)
GTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCG < SRR4302542.1360219/94‑1 (MQ=60)
GTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCG > SRR4302542.6057678/1‑94 (MQ=60)
GTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCG > SRR4302542.4537007/1‑94 (MQ=60)
GTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCG < SRR4302542.5653607/94‑1 (MQ=60)
GTGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCG < SRR4302542.219459/94‑1 (MQ=60)
TGATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGG > SRR4302542.4645122/1‑94 (MQ=60)
GATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGA > SRR4302542.3269855/1‑94 (MQ=60)
GATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGA > SRR4302542.3482455/1‑94 (MQ=60)
GATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGA > SRR4302542.3559553/1‑94 (MQ=60)
GATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGA > SRR4302542.5407977/1‑94 (MQ=60)
ATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGAC < SRR4302542.3960862/94‑1 (MQ=60)
ATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGAC < SRR4302542.1134713/94‑1 (MQ=60)
ATCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGAC < SRR4302542.5652187/94‑1 (MQ=60)
TCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACG < SRR4302542.5015042/94‑1 (MQ=60)
TCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGCCG > SRR4302542.5083579/1‑94 (MQ=60)
TCATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACG < SRR4302542.5064983/94‑1 (MQ=60)
CATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGG > SRR4302542.4504130/1‑94 (MQ=60)
CATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGG < SRR4302542.3548746/94‑1 (MQ=60)
ATACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGC > SRR4302542.5445383/1‑94 (MQ=60)
TACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGCC < SRR4302542.2089206/94‑1 (MQ=60)
TACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGCC < SRR4302542.2574141/94‑1 (MQ=60)
TACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGCC < SRR4302542.3199727/94‑1 (MQ=60)
ACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGCCA > SRR4302542.3706393/1‑94 (MQ=60)
ACTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGCCA > SRR4302542.4319021/1‑94 (MQ=60)
CTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGCCAT < SRR4302542.1281682/94‑1 (MQ=60)
CTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGCCAT < SRR4302542.1149290/94‑1 (MQ=60)
CTGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGCCAT > SRR4302542.5539194/1‑94 (MQ=60)
TGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGCCATT > SRR4302542.1109725/1‑94 (MQ=60)
TGACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGCCATT > SRR4302542.178389/1‑94 (MQ=60)
GACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGCCATTC < SRR4302542.3215619/94‑1 (MQ=60)
GACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGCCATTC < SRR4302542.435717/94‑1 (MQ=60)
ACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGCCATTCG < SRR4302542.7299659/94‑1 (MQ=60)
ACGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGCCATTCG < SRR4302542.6787497/94‑1 (MQ=60)
CGCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGCCATTCGG < SRR4302542.6664830/94‑1 (MQ=60)
GCCCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGCCATTCGGG < SRR4302542.311372/94‑1 (MQ=60)
CCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGCCATTCGGGT > SRR4302542.2959659/1‑94 (MQ=60)
CCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGCCATTCGGGT > SRR4302542.7498281/1‑94 (MQ=60)
CCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGGCATTCGGGTC > SRR4302542.2093029/1‑94 (MQ=60)
CCTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGCCATTCGGGTC < SRR4302542.651220/94‑1 (MQ=60)
CTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGCCATTCGGGTCA < SRR4302542.176258/94‑1 (MQ=60)
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ATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCATACTGACGCCTTCAGCAATCATGTCGTAAGCCTGCCAATTGCCCGTCTGGGAGTTTTTACGCCACTGGAAGTCCAGACGCACCGGCGGACGGCCATTCGGGTCA > NC_000913/3334934‑3335119
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
