Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GAGCGGCTTCGAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGATGCA > NC_000913/3916075‑3916259
|
GAGCGGCTTCGAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGA > SRR4302542.7051669/1‑94 (MQ=60)
GGCTTCGAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATC < SRR4302542.1819409/94‑1 (MQ=60)
GCTTCGAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCG > SRR4302542.7515559/1‑94 (MQ=60)
GCTTCGAAGCTCACAATCTTCGACAGTTCAACATCCGCCAGGTACCCACGTTCTGCTGCGACCAGATCCAGAGACTGCTGCGCAACGGGCATCG < SRR4302542.7078623/94‑1 (MQ=60)
CTTCGAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGG < SRR4302542.3812354/94‑1 (MQ=60)
CTTCGAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGG > SRR4302542.6587902/1‑94 (MQ=60)
CTTCGAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGG < SRR4302542.4135665/94‑1 (MQ=60)
CTTCGAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGG > SRR4302542.934512/1‑94 (MQ=60)
CTTCGAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGG < SRR4302542.74282/94‑1 (MQ=60)
TTCGAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGC > SRR4302542.4090654/1‑94 (MQ=60)
TTCGAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGC < SRR4302542.1679273/94‑1 (MQ=60)
CGAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGC > SRR4302542.7014183/1‑94 (MQ=60)
GAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCA > SRR4302542.3265507/1‑94 (MQ=60)
AGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATA > SRR4302542.2077493/1‑94 (MQ=60)
AGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATA > SRR4302542.4865406/1‑94 (MQ=60)
CTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACT > SRR4302542.628225/1‑94 (MQ=60)
CTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACT > SRR4302542.4751388/1‑94 (MQ=60)
CCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTT < SRR4302542.2636076/94‑1 (MQ=60)
CCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTT < SRR4302542.7490470/94‑1 (MQ=60)
CCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTT > SRR4302542.1166954/1‑94 (MQ=60)
CCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTT < SRR4302542.2217842/94‑1 (MQ=60)
CCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTT > SRR4302542.27438/1‑94 (MQ=60)
CAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTT > SRR4302542.7484437/1‑94 (MQ=60)
AATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTC > SRR4302542.6563122/1‑94 (MQ=60)
ATTTTCGTCAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCT < SRR4302542.3809446/94‑1 (MQ=60)
ATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCT < SRR4302542.4158176/94‑1 (MQ=60)
ATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCT < SRR4302542.4220374/94‑1 (MQ=60)
ATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCT < SRR4302542.1761790/94‑1 (MQ=60)
ATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCT < SRR4302542.1329263/94‑1 (MQ=60)
ATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCT < SRR4302542.3578622/94‑1 (MQ=60)
TTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTG < SRR4302542.2436754/94‑1 (MQ=60)
TTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGT < SRR4302542.2366242/94‑1 (MQ=60)
TTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTT < SRR4302542.4692090/94‑1 (MQ=60)
CGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTC > SRR4302542.2789525/1‑94 (MQ=60)
GACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCA < SRR4302542.1131522/94‑1 (MQ=60)
GACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCA < SRR4302542.5852388/94‑1 (MQ=60)
GACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCA < SRR4302542.533197/94‑1 (MQ=60)
GACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCA < SRR4302542.751588/94‑1 (MQ=60)
GACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCA > SRR4302542.6379361/1‑94 (MQ=60)
ACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAG > SRR4302542.6913875/1‑94 (MQ=60)
ACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAG < SRR4302542.6555932/94‑1 (MQ=60)
ACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAG < SRR4302542.3062138/94‑1 (MQ=60)
CAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGC > SRR4302542.6361657/1‑94 (MQ=60)
CAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGC < SRR4302542.607253/94‑1 (MQ=60)
AGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCA > SRR4302542.1969451/1‑94 (MQ=60)
AGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCA > SRR4302542.571430/1‑94 (MQ=60)
AGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCA < SRR4302542.2160412/94‑1 (MQ=60)
AGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCA > SRR4302542.7187475/1‑94 (MQ=60)
GTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAG < SRR4302542.2158799/94‑1 (MQ=60)
TTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGT > SRR4302542.7049233/1‑94 (MQ=60)
TTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGT > SRR4302542.1879627/1‑94 (MQ=60)
TTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGT < SRR4302542.2607121/94‑1 (MQ=60)
CAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTC > SRR4302542.5227365/1‑94 (MQ=60)
AACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCG < SRR4302542.4258549/94‑1 (MQ=60)
AACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCG < SRR4302542.3017616/94‑1 (MQ=60)
AACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCG < SRR4302542.5034016/94‑1 (MQ=60)
AACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCG < SRR4302542.1300509/94‑1 (MQ=60)
AACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCG > SRR4302542.6648559/1‑94 (MQ=60)
AACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCG > SRR4302542.5812756/1‑94 (MQ=60)
CATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGT < SRR4302542.3458672/94‑1 (MQ=60)
CATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGT > SRR4302542.3559694/1‑94 (MQ=60)
CATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGT > SRR4302542.956603/1‑94 (MQ=60)
ATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTC > SRR4302542.7156447/1‑94 (MQ=60)
ATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTC > SRR4302542.776159/1‑94 (MQ=60)
CCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCAC > SRR4302542.587841/1‑94 (MQ=60)
CCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCAC < SRR4302542.1144321/94‑1 (MQ=60)
CGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCAAACTGTTTCTGTTTCAGCAGTTCGGTCACT > SRR4302542.4362476/1‑94 (MQ=60)
CGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACT > SRR4302542.4265253/1‑94 (MQ=60)
GCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTT > SRR4302542.2818681/1‑94 (MQ=60)
GCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCCGTTTCAGCAGTTCGGTCACTT > SRR4302542.3865757/1‑94 (MQ=60)
GCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTT < SRR4302542.5786600/94‑1 (MQ=60)
CCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTT > SRR4302542.1228349/1‑94 (MQ=60)
CCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTT > SRR4302542.1750667/1‑94 (MQ=60)
CCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTT > SRR4302542.4037434/1‑94 (MQ=60)
CAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTC > SRR4302542.2690704/1‑94 (MQ=60)
AGGTATCCACGTTCTGCTGCGAACAGAGCCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCT < SRR4302542.950471/94‑1 (MQ=60)
AGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCT > SRR4302542.6572350/1‑94 (MQ=60)
AGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCT > SRR4302542.6643901/1‑94 (MQ=60)
GGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTG < SRR4302542.7278510/94‑1 (MQ=60)
GGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTG > SRR4302542.899808/1‑94 (MQ=60)
GGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTG < SRR4302542.3522803/94‑1 (MQ=60)
GGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTG > SRR4302542.662095/1‑94 (MQ=60)
ACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCG > SRR4302542.6017249/1‑94 (MQ=60)
ACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCG > SRR4302542.6693268/1‑94 (MQ=60)
CCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGT > SRR4302542.2882102/1‑94 (MQ=60)
CACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTG < SRR4302542.2620049/94‑1 (MQ=60)
ACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGG > SRR4302542.6383951/1‑94 (MQ=60)
CGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGT > SRR4302542.5473358/1‑94 (MQ=60)
GTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTC < SRR4302542.131769/94‑1 (MQ=60)
GTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTC > SRR4302542.2811536/1‑94 (MQ=60)
TTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCA < SRR4302542.6681871/94‑1 (MQ=60)
TCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAA > SRR4302542.1012149/1‑94 (MQ=60)
CTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAG < SRR4302542.2307553/94‑1 (MQ=60)
CTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAG < SRR4302542.2133325/94‑1 (MQ=60)
TGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGC > SRR4302542.1517319/1‑94 (MQ=60)
TGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGC > SRR4302542.6600513/1‑94 (MQ=60)
GCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCT < SRR4302542.516211/94‑1 (MQ=60)
GCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCT < SRR4302542.3997643/94‑1 (MQ=60)
CTGCGAACAGAACCAGAGACTGCTGTGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTG > SRR4302542.3681425/1‑94 (MQ=60)
GCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCT < SRR4302542.3841952/94‑1 (MQ=60)
CGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTT > SRR4302542.434296/1‑94 (MQ=60)
CGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTT > SRR4302542.428247/1‑94 (MQ=60)
GAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTA > SRR4302542.6551277/1‑94 (MQ=60)
GAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTA < SRR4302542.4191037/94‑1 (MQ=60)
GAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTA > SRR4302542.1118602/1‑94 (MQ=60)
AACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTAC < SRR4302542.2975313/94‑1 (MQ=60)
AACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTAC < SRR4302542.4235321/94‑1 (MQ=60)
AGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTG < SRR4302542.1810538/94‑1 (MQ=60)
AGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTG > SRR4302542.1204598/1‑94 (MQ=60)
AGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTG > SRR4302542.3096842/1‑94 (MQ=60)
GAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGT > SRR4302542.4522122/1‑94 (MQ=60)
atccgaccttgacgatGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTT > SRR4302542.6968295/17‑94 (MQ=60)
AACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTT > SRR4302542.4590280/1‑94 (MQ=60)
CCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGC > SRR4302542.852314/1‑94 (MQ=60)
CCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGC < SRR4302542.6518959/94‑1 (MQ=60)
CAGAGACTGCTGCGCAACGGGCATCGTCGCATTCTGTTTCTTTTTCAGCAGTTCGGTCACGTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCA < SRR4302542.4363262/94‑1 (MQ=60)
CAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCA > SRR4302542.1758812/1‑94 (MQ=60)
CAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCA < SRR4302542.2743667/94‑1 (MQ=60)
CAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCA > SRR4302542.4905761/1‑94 (MQ=60)
GAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATC > SRR4302542.1665833/1‑94 (MQ=60)
GAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATC < SRR4302542.5747299/94‑1 (MQ=60)
ACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTC < SRR4302542.6846032/94‑1 (MQ=60)
CTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCA < SRR4302542.3726015/94‑1 (MQ=60)
TGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAA > SRR4302542.7425216/1‑94 (MQ=60)
TGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAA > SRR4302542.3792597/1‑94 (MQ=60)
TGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAA > SRR4302542.2359179/1‑94 (MQ=60)
GCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAG < SRR4302542.2605432/94‑1 (MQ=60)
GCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAG < SRR4302542.556267/94‑1 (MQ=60)
GCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAG < SRR4302542.3880833/94‑1 (MQ=60)
GCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAG < SRR4302542.5133283/94‑1 (MQ=60)
CTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGG > SRR4302542.1655614/1‑94 (MQ=60)
CTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGG > SRR4302542.2612049/1‑94 (MQ=60)
TGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGT > SRR4302542.6731325/1‑94 (MQ=60)
TGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGT < SRR4302542.3784373/94‑1 (MQ=60)
TGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGT < SRR4302542.6942315/94‑1 (MQ=60)
TGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGT < SRR4302542.4507507/94‑1 (MQ=60)
GCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTC < SRR4302542.4431023/94‑1 (MQ=60)
GCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTC < SRR4302542.3849241/94‑1 (MQ=60)
GCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGG > SRR4302542.2780977/1‑94 (MQ=60)
CAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGA > SRR4302542.2520849/1‑94 (MQ=60)
AACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGAT > SRR4302542.4320854/1‑94 (MQ=60)
AACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGAT < SRR4302542.7586872/94‑1 (MQ=60)
AACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGAT > SRR4302542.426514/1‑94 (MQ=60)
AACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTAGGTCACTTTCTGACCGTGGTCAAGCTGCTTATGTGTTGCATCGTCAAGGTCtgct > SRR4302542.654128/1‑90 (MQ=60)
ACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGATG < SRR4302542.411309/94‑1 (MQ=60)
ACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGATG < SRR4302542.3246153/94‑1 (MQ=60)
CGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGATGC > SRR4302542.9556/1‑94 (MQ=60)
CGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGATGC > SRR4302542.3917870/1‑94 (MQ=60)
CGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGATGC > SRR4302542.3764767/1‑94 (MQ=60)
GGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGATGCA > SRR4302542.4493154/1‑94 (MQ=60)
GGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGATGCA < SRR4302542.2213363/94‑1 (MQ=60)
GGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGATGCA > SRR4302542.1152758/1‑94 (MQ=60)
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GAGCGGCTTCGAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGATGCA > NC_000913/3916075‑3916259
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
