Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,916,949 |
A→G |
A179A (GCT→GCC) |
atpA ← |
membrane‑bound ATP synthase, F1 sector, alpha‑subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,916,949 | 0 | A | G | 84.1%
| 624.6
/ 116.2
| 276 | A179A (GCT→GCC) | atpA | membrane‑bound ATP synthase, F1 sector, alpha‑subunit |
| Reads supporting (aligned to +/- strand): ref base A (24/20); new base G (121/111); total (145/131) |
| Fisher's exact test for biased strand distribution p-value = 8.70e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.62e-01 |
Only 100 of 276 total aligned reads displayed.
GTACCACGTTAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAAC > NC_000913/3916858‑3917040
|
aCCACGTTAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGcc > 2:5185453/1‑93 (MQ=255)
aCCACGTTAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGcc > 1:6905448/1‑93 (MQ=255)
cACGTTAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAg < 1:7389473/93‑1 (MQ=255)
gTTAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGc < 2:1016052/93‑1 (MQ=255)
ttAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑g > 1:2570314/1‑93 (MQ=255)
tAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑gg < 2:1452657/93‑1 (MQ=255)
tAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑gg > 2:5679327/1‑93 (MQ=255)
tAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑gg < 1:885559/93‑1 (MQ=255)
gAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGtt < 2:7165742/93‑1 (MQ=255)
aaaTGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGttt < 2:2586647/93‑1 (MQ=255)
aaaTGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGttt < 1:2683733/93‑1 (MQ=255)
tggtggACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTAc < 1:3601968/93‑1 (MQ=255)
ggtggACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTAcc < 2:3031566/93‑1 (MQ=255)
ggtggACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTAcc < 2:5228030/93‑1 (MQ=255)
tggACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTg < 2:2951716/93‑1 (MQ=255)
ggACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGt > 1:5667519/1‑93 (MQ=255)
ggACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGt < 1:1165561/93‑1 (MQ=255)
gACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTc < 2:5988877/93‑1 (MQ=255)
aCGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCt < 1:6991527/93‑1 (MQ=255)
aCGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCt < 1:514445/93‑1 (MQ=255)
cGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTg > 1:5444005/1‑93 (MQ=255)
gCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGGTGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGa < 2:6120464/93‑1 (MQ=255)
gCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGa < 2:6854322/93‑1 (MQ=255)
gCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGa < 2:5318018/93‑1 (MQ=255)
gCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGa > 1:4238474/1‑93 (MQ=255)
gCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGa > 1:2286635/1‑93 (MQ=255)
gCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGa < 1:3858108/93‑1 (MQ=255)
gCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGa > 2:5466176/1‑93 (MQ=255)
cTTTCTGGCCGATAGCGACATAGATACGTTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGAc > 2:6421260/1‑93 (MQ=255)
tttCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGCGGGTTTTACTTGTCTGAc > 1:6166153/1‑93 (MQ=255)
tttCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACg < 2:5795109/93‑1 (MQ=255)
tCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGt > 1:2232116/1‑93 (MQ=255)
ggCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCAc < 2:3922352/93‑1 (MQ=255)
gCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCAcc > 1:1996968/1‑93 (MQ=255)
cGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCga < 2:7056706/93‑1 (MQ=255)
gATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCgat < 2:2048964/93‑1 (MQ=255)
gATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCgat > 2:4121983/1‑93 (MQ=255)
aTAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCgatg < 1:4550124/93‑1 (MQ=255)
tAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCgatga < 1:373001/93‑1 (MQ=255)
tAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCgatga < 1:7512354/93‑1 (MQ=255)
aGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCgatgat > 2:3864390/1‑93 (MQ=255)
gCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATc > 2:7249463/1‑93 (MQ=255)
gCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATc < 2:4770337/93‑1 (MQ=255)
gCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATc > 2:3110810/1‑93 (MQ=255)
aCATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAAt > 1:4592849/1‑93 (MQ=255)
aCATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAAt > 2:3547243/1‑93 (MQ=255)
cATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAAtt > 1:6083750/1‑93 (MQ=255)
aTAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTc > 1:6764730/1‑93 (MQ=255)
tAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCa > 2:6942685/1‑93 (MQ=255)
gATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACg > 2:1328546/1‑93 (MQ=255)
aTACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGc < 1:3229810/93‑1 (MQ=255)
aTACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGc < 1:5260259/93‑1 (MQ=255)
tACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCt > 1:5063233/1‑93 (MQ=255)
tACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCt < 1:4674564/93‑1 (MQ=255)
tACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCt > 2:470846/1‑93 (MQ=255)
cATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGa > 2:1129254/1‑93 (MQ=255)
cATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGa < 1:1556152/93‑1 (MQ=255)
cATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGa > 1:2385570/1‑93 (MQ=255)
aTTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGAc > 2:720772/1‑93 (MQ=255)
aTTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGAc > 1:136301/1‑93 (MQ=255)
tGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCAc < 2:1819262/93‑1 (MQ=255)
aTACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGa < 2:512532/93‑1 (MQ=255)
tACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGAc < 2:5251934/93‑1 (MQ=255)
tACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGAc > 2:7029965/1‑93 (MQ=255)
ggAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGAt > 1:6926541/1‑93 (MQ=255)
aaTCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTg < 1:3104147/93‑1 (MQ=255)
aaTCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTg < 2:4537408/93‑1 (MQ=255)
aaTCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTg < 2:4628373/93‑1 (MQ=255)
aaTCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTg < 1:5194987/93‑1 (MQ=255)
aTCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTgg > 2:5892651/1‑93 (MQ=255)
aTCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTgg < 1:2896999/93‑1 (MQ=255)
gcgcTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGAt > 1:1001634/1‑93 (MQ=255)
gcgcTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGAt > 2:2542839/1‑93 (MQ=255)
gcTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCa > 1:4867416/1‑93 (MQ=255)
cTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCAt < 1:4114486/93‑1 (MQ=255)
cTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCAt < 1:5555533/93‑1 (MQ=255)
cTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCAt > 1:2471848/1‑93 (MQ=255)
cTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCAt < 2:896217/93‑1 (MQ=255)
tGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATg > 2:7391162/1‑93 (MQ=255)
ggTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATgg < 2:5000503/93‑1 (MQ=255)
ggTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATgg < 1:3205691/93‑1 (MQ=255)
gTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGa > 2:265818/1‑93 (MQ=255)
gTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACCGTCTCCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGa < 1:948402/93‑1 (MQ=255)
gTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGa > 2:7455586/1‑93 (MQ=255)
ttGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAg > 2:1156262/1‑93 (MQ=255)
gatgatGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTc > 1:7044567/1‑93 (MQ=255)
atgatgGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCa < 1:1026802/93‑1 (MQ=255)
gatgGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAAc < 2:6323679/93‑1 (MQ=255)
atgGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACg < 1:1288092/93‑1 (MQ=255)
atgGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACg > 2:4850353/1‑93 (MQ=255)
cATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCtt < 1:3488950/93‑1 (MQ=255)
cATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCtt > 2:1837056/1‑93 (MQ=255)
aTCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCttt > 1:6272381/1‑93 (MQ=255)
tCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTta > 1:6458875/1‑93 (MQ=255)
tCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTta < 2:3764627/93‑1 (MQ=255)
cGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTtat < 1:1385037/93‑1 (MQ=255)
gATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTtata > 2:3189012/1‑93 (MQ=255)
gATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTtata > 2:4315710/1‑93 (MQ=255)
gATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTtata > 1:5995698/1‑93 (MQ=255)
aTAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATaa > 2:6515091/1‑93 (MQ=255)
|
GTACCACGTTAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAAC > NC_000913/3916858‑3917040
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGTACCACGTTAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCG > NC_000913/3916857‑3917042
|
CGTACCACGTTAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGG > SRR4302542.3020124/1‑94 (MQ=60)
CGTACCACGTTAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGG < SRR4302542.2468294/94‑1 (MQ=60)
GTACCACGTTAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGC < SRR4302542.4817020/94‑1 (MQ=60)
GTACCACGTTAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGC > SRR4302542.1312409/1‑94 (MQ=60)
TACCACGTTAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCC < SRR4302542.1432570/94‑1 (MQ=60)
TACCACGTTAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCC > SRR4302542.1418614/1‑94 (MQ=60)
TACCACGTTAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCC > SRR4302542.6973241/1‑94 (MQ=60)
CCACGTTAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAG < SRR4302542.4859620/94‑1 (MQ=60)
CACGTTAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGT < SRR4302542.7461808/94‑1 (MQ=60)
GTTAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑G > SRR4302542.5216725/1‑94 (MQ=60)
GTTAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑G > SRR4302542.2595217/1‑94 (MQ=60)
TAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGT < SRR4302542.893216/94‑1 (MQ=60)
AGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTT > SRR4302542.2362622/1‑94 (MQ=60)
AGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTT > SRR4302542.6690847/1‑94 (MQ=60)
AAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTT < SRR4302542.2709617/94‑1 (MQ=60)
TGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACC < SRR4302542.3635534/94‑1 (MQ=60)
TGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACC > SRR4302542.5144408/1‑94 (MQ=60)
TGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACC < SRR4302542.3592468/94‑1 (MQ=60)
TGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGT > SRR4302542.5722567/1‑94 (MQ=60)
GGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTC < SRR4302542.1175600/94‑1 (MQ=60)
GACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCT < SRR4302542.2212811/94‑1 (MQ=60)
ACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTG > SRR4302542.5496892/1‑94 (MQ=60)
ACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTG < SRR4302542.7060209/94‑1 (MQ=60)
ACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTG < SRR4302542.518906/94‑1 (MQ=60)
CGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGA > SRR4302542.2413547/1‑94 (MQ=60)
CGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGA > SRR4302542.4280213/1‑94 (MQ=60)
CGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGA > SRR4302542.2306280/1‑94 (MQ=60)
CGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGA > SRR4302542.247733/1‑94 (MQ=60)
GCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGAC < SRR4302542.3896212/94‑1 (MQ=60)
CTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGCGGGTTTTACTTGTCTGAC > SRR4302542.6225891/1‑94 (MQ=60)
CTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACG > SRR4302542.977489/1‑94 (MQ=60)
TTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGG > SRR4302542.5527273/1‑94 (MQ=60)
TTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGG > SRR4302542.2562773/1‑94 (MQ=60)
TTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGG < SRR4302542.6874622/94‑1 (MQ=60)
TTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGT > SRR4302542.2251324/1‑94 (MQ=60)
CTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCA < SRR4302542.6243342/94‑1 (MQ=60)
CTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCA > SRR4302542.7467383/1‑94 (MQ=60)
GGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACC > SRR4302542.7598980/1‑94 (MQ=60)
GGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACC > SRR4302542.2014197/1‑94 (MQ=60)
GCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCG < SRR4302542.6125314/94‑1 (MQ=60)
CCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGA > SRR4302542.1140262/1‑94 (MQ=60)
CGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGAT < SRR4302542.5672692/94‑1 (MQ=60)
CGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGAT < SRR4302542.4598492/94‑1 (MQ=60)
CGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGAT < SRR4302542.6138682/94‑1 (MQ=60)
CGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGAT < SRR4302542.3959071/94‑1 (MQ=60)
GATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATG < SRR4302542.4004458/94‑1 (MQ=60)
ATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGA < SRR4302542.3032072/94‑1 (MQ=60)
ATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGA > SRR4302542.948647/1‑94 (MQ=60)
ATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGA < SRR4302542.107636/94‑1 (MQ=60)
ATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGA < SRR4302542.4594656/94‑1 (MQ=60)
TAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGAT < SRR4302542.4566065/94‑1 (MQ=60)
TAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGAT < SRR4302542.7586236/94‑1 (MQ=60)
TAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGAT < SRR4302542.376250/94‑1 (MQ=60)
TAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGAT < SRR4302542.2729159/94‑1 (MQ=60)
AGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATC < SRR4302542.3745007/94‑1 (MQ=60)
AGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATC < SRR4302542.7238874/94‑1 (MQ=60)
GCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCA > SRR4302542.4951301/1‑94 (MQ=60)
CGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAA > SRR4302542.6901262/1‑94 (MQ=60)
GACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAAT > SRR4302542.4778070/1‑94 (MQ=60)
GACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAAT > SRR4302542.4637766/1‑94 (MQ=60)
GACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAAT < SRR4302542.1940143/94‑1 (MQ=60)
ACATGGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATT > SRR4302542.7040442/1‑94 (MQ=60)
ACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATT < SRR4302542.3685836/94‑1 (MQ=60)
ACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATT > SRR4302542.6142653/1‑94 (MQ=60)
CATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTC > SRR4302542.699691/1‑94 (MQ=60)
CATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTC > SRR4302542.6831266/1‑94 (MQ=60)
CATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTC < SRR4302542.6185987/94‑1 (MQ=60)
ATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCA > SRR4302542.2364473/1‑94 (MQ=60)
ATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCA > SRR4302542.5877745/1‑94 (MQ=60)
TAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCAC > SRR4302542.7073286/1‑94 (MQ=60)
AGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACG > SRR4302542.1653747/1‑94 (MQ=60)
ATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCT < SRR4302542.5311374/94‑1 (MQ=60)
ATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCT < SRR4302542.3260364/94‑1 (MQ=60)
ATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCT > SRR4302542.5112435/1‑94 (MQ=60)
TACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTG < SRR4302542.33978/94‑1 (MQ=60)
TACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTG < SRR4302542.4720241/94‑1 (MQ=60)
ACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGA > SRR4302542.2407712/1‑94 (MQ=60)
CATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGAC > SRR4302542.591358/1‑94 (MQ=60)
CATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGAC < SRR4302542.1569582/94‑1 (MQ=60)
CATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGAC > SRR4302542.137442/1‑94 (MQ=60)
ATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACC > SRR4302542.1012455/1‑94 (MQ=60)
TTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCA < SRR4302542.3188150/94‑1 (MQ=60)
TTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCAC < SRR4302542.1276797/94‑1 (MQ=60)
TGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACG > SRR4302542.994562/1‑94 (MQ=60)
TGATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACG > SRR4302542.6386300/1‑94 (MQ=60)
TGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACG < SRR4302542.5155483/94‑1 (MQ=60)
GATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGA < SRR4302542.4260787/94‑1 (MQ=60)
GATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGA > SRR4302542.7589087/1‑94 (MQ=60)
GATACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGA > SRR4302542.2852030/1‑94 (MQ=60)
ATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGAC < SRR4302542.1272201/94‑1 (MQ=60)
TACCGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACC > SRR4302542.4579845/1‑94 (MQ=60)
ACCGGAATCGCGATGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCG < SRR4302542.5354190/94‑1 (MQ=60)
CCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGA > SRR4302542.5254150/1‑94 (MQ=60)
CGGAATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGAT > SRR4302542.6994545/1‑94 (MQ=60)
CGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGAT > SRR4302542.1356902/1‑94 (MQ=60)
AATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGG > SRR4302542.137766/1‑94 (MQ=60)
AATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGG < SRR4302542.3133648/94‑1 (MQ=60)
AATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGG < SRR4302542.5245463/94‑1 (MQ=60)
ATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGG < SRR4302542.7099086/94‑1 (MQ=60)
ATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGG < SRR4302542.6644925/94‑1 (MQ=60)
ATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGG > SRR4302542.929613/1‑94 (MQ=60)
ATCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGG < SRR4302542.2924800/94‑1 (MQ=60)
TCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGA < SRR4302542.4654549/94‑1 (MQ=60)
TCGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGA < SRR4302542.2638456/94‑1 (MQ=60)
CGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGAT > SRR4302542.1010253/1‑94 (MQ=60)
CGCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGAT > SRR4302542.229123/1‑94 (MQ=60)
GCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATC < SRR4302542.3217145/94‑1 (MQ=60)
GCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATC < SRR4302542.5710673/94‑1 (MQ=60)
GCGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATC < SRR4302542.2578689/94‑1 (MQ=60)
GCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATC < SRR4302542.6985699/94‑1 (MQ=60)
CGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCA < SRR4302542.3287825/94‑1 (MQ=60)
CGCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCA > SRR4302542.4914804/1‑94 (MQ=60)
GCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCAT < SRR4302542.3024046/94‑1 (MQ=60)
GCTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCAT > SRR4302542.2495835/1‑94 (MQ=60)
CTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATG < SRR4302542.5609513/94‑1 (MQ=60)
CTGGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATG < SRR4302542.4155030/94‑1 (MQ=60)
TGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGG < SRR4302542.5374224/94‑1 (MQ=60)
GGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGA < SRR4302542.3236060/94‑1 (MQ=60)
GGTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTAACGCTGACCACGACCGATTGGGATCATGGA > SRR4302542.6224589/1‑94 (MQ=60)
GTTGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACCGTCTCCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAG < SRR4302542.956555/94‑1 (MQ=60)
TGATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTC > SRR4302542.7113754/1‑94 (MQ=60)
ATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAA < SRR4302542.7165991/94‑1 (MQ=60)
ATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAA < SRR4302542.1035652/94‑1 (MQ=60)
ATGATGGCATCGATGGCCAGTGC‑GGTTTTACCTGCCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAA > SRR4302542.5301657/1‑94 (MQ=60)
ATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGG < SRR4302542.1299183/94‑1 (MQ=60)
ATGGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGG < SRR4302542.5095216/94‑1 (MQ=60)
ATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGG > SRR4302542.4620537/1‑94 (MQ=60)
GGCATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCT > SRR4302542.5577889/1‑94 (MQ=60)
CATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTT > SRR4302542.3258800/1‑94 (MQ=60)
CATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTT < SRR4302542.3521577/94‑1 (MQ=60)
CATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTT > SRR4302542.6400114/1‑94 (MQ=60)
CATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTT > SRR4302542.6334207/1‑94 (MQ=60)
ATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTA < SRR4302542.2017694/94‑1 (MQ=60)
ATCGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTA > SRR4302542.6522473/1‑94 (MQ=60)
CGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATA < SRR4302542.1397002/94‑1 (MQ=60)
CGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATA > SRR4302542.4202061/1‑94 (MQ=60)
CGATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATA > SRR4302542.3590256/1‑94 (MQ=60)
CGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATA > SRR4302542.6053772/1‑94 (MQ=60)
GATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAA > SRR4302542.2801986/1‑94 (MQ=60)
ATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAAC > SRR4302542.5224885/1‑94 (MQ=60)
ATGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAAC > SRR4302542.1197611/1‑94 (MQ=60)
TGGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACC > SRR4302542.1790011/1‑94 (MQ=60)
TAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACC < SRR4302542.3809943/94‑1 (MQ=60)
GGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCG > SRR4302542.4970549/1‑94 (MQ=60)
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CGTACCACGTTAGAAATGGTGGACGCTTTCTGGCCGATAGCGACATAGATACATTTGATACCGGAATCGCGCTGGTTGATGATGGCATCGATAGCCAGTGC‑GGTTTTACCTGTCTGACGGTCACCGATGATCAATTCACGCTGACCACGACCGATTGGGATCATGGAGTCAACGGCTTTATAACCG > NC_000913/3916857‑3917042
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
