Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGTCTTCAAATGGGATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCGGTGAAAACCAC > NC_000913/4234268‑4234454
|
CAGTCTTCAAATGGGATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGT > SRR4302542.2928647/1‑94 (MQ=60)
CAGTCTTCAAATGGGATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGT > SRR4302542.621014/1‑94 (MQ=60)
CAGTCTTCAAATGGGATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGT > SRR4302542.171419/1‑94 (MQ=60)
CAGTCTTCAAATGGGATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGT < SRR4302542.962756/94‑1 (MQ=60)
CAGTCTTCAAATGGGATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGC < SRR4302542.3540537/94‑1 (MQ=60)
CAGTCTTCAAATGGGATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGC < SRR4302542.6680515/94‑1 (MQ=60)
CAGTCTTCAAATGGGATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGC > SRR4302542.1620762/1‑94 (MQ=60)
CAGTCTTCAAATGGGATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGC > SRR4302542.5727421/1‑94 (MQ=60)
CAGTCTTCAAATGGGATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGC < SRR4302542.1342991/94‑1 (MQ=60)
CAGTCTTCAAATGGGATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGC > SRR4302542.1234519/1‑94 (MQ=60)
AGTCTTCAAATGGGATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTG < SRR4302542.2634984/94‑1 (MQ=60)
CAAATGGGATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGG < SRR4302542.182719/94‑1 (MQ=60)
AAATGGGATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGC < SRR4302542.4233860/94‑1 (MQ=60)
ATGGGATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCAT > SRR4302542.6980027/1‑94 (MQ=60)
ATGGGATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCAT > SRR4302542.1396427/1‑94 (MQ=60)
ATGGGATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCAT < SRR4302542.1228407/94‑1 (MQ=60)
ATGGGATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCAT < SRR4302542.6622482/94‑1 (MQ=60)
GATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACC < SRR4302542.3765050/94‑1 (MQ=60)
ATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCG < SRR4302542.899190/94‑1 (MQ=60)
TGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGC > SRR4302542.1067176/1‑94 (MQ=60)
GGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCT < SRR4302542.369529/94‑1 (MQ=60)
GCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTA > SRR4302542.2657230/1‑94 (MQ=60)
CACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTAT < SRR4302542.4162166/94‑1 (MQ=60)
CACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTAT < SRR4302542.6452301/94‑1 (MQ=60)
CACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTAT > SRR4302542.5835853/1‑94 (MQ=60)
CACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTAT > SRR4302542.841868/1‑94 (MQ=60)
ACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATT > SRR4302542.724928/1‑94 (MQ=60)
ACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATT > SRR4302542.6380533/1‑94 (MQ=60)
CGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGG < SRR4302542.5243004/94‑1 (MQ=60)
CGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGG > SRR4302542.7025598/1‑94 (MQ=60)
CGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGG > SRR4302542.1642569/1‑94 (MQ=60)
CGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGG < SRR4302542.5748825/94‑1 (MQ=60)
ATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGAT > SRR4302542.3989363/1‑94 (MQ=60)
ATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGAT < SRR4302542.3063635/94‑1 (MQ=60)
TACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATC < SRR4302542.6924747/94‑1 (MQ=60)
NNCCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATC < SRR4302542.3497696/94‑1 (MQ=60)
ACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCG > SRR4302542.6157951/1‑94 (MQ=60)
ACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCG < SRR4302542.3147015/94‑1 (MQ=60)
CCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGA > SRR4302542.6190219/1‑94 (MQ=60)
CGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGAC > SRR4302542.5213986/1‑94 (MQ=60)
CGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGAC > SRR4302542.4931153/1‑94 (MQ=60)
GTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCCTAACCGCTATTGGATCGACA > SRR4302542.1052670/1‑94 (MQ=60)
GTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACA > SRR4302542.1052669/1‑94 (MQ=60)
GTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGCCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACA > SRR4302542.7462126/1‑94 (MQ=60)
CAAAGTCGGCAGCGATGAACCCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACTAGGCGCGCTGGCATAACCGCTATTGGATCGACAGC < SRR4302542.3650082/94‑1 (MQ=60)
CAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGC > SRR4302542.3858049/1‑94 (MQ=60)
CAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGC > SRR4302542.4545238/1‑94 (MQ=60)
AAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCG > SRR4302542.1040288/1‑94 (MQ=60)
AAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCG < SRR4302542.4320989/94‑1 (MQ=60)
AGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAA < SRR4302542.7348056/94‑1 (MQ=60)
AGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAA < SRR4302542.1283466/94‑1 (MQ=60)
GTCGGCGGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAG < SRR4302542.2204899/94‑1 (MQ=60)
GTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAG < SRR4302542.6647025/94‑1 (MQ=60)
GTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAG > SRR4302542.6869706/1‑94 (MQ=60)
GTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAG < SRR4302542.6833868/94‑1 (MQ=60)
GTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAG < SRR4302542.1993080/94‑1 (MQ=60)
TCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGG < SRR4302542.3459729/94‑1 (MQ=60)
TCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGG < SRR4302542.4210573/94‑1 (MQ=60)
CGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGG < SRR4302542.7307233/94‑1 (MQ=60)
CGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGG < SRR4302542.7477111/94‑1 (MQ=60)
CGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGG > SRR4302542.6925560/1‑94 (MQ=60)
GGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGC < SRR4302542.6655286/94‑1 (MQ=60)
GGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGC > SRR4302542.2837622/1‑94 (MQ=60)
CAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAA < SRR4302542.5656491/94‑1 (MQ=60)
AGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAA > SRR4302542.78450/1‑94 (MQ=60)
GCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAAT < SRR4302542.2337292/94‑1 (MQ=60)
GCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAAT < SRR4302542.1916230/94‑1 (MQ=60)
CGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATT < SRR4302542.5851199/94‑1 (MQ=60)
GATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTC > SRR4302542.5819059/1‑94 (MQ=60)
GATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTC < SRR4302542.887954/94‑1 (MQ=60)
ATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCG > SRR4302542.1496204/1‑94 (MQ=60)
ATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCG > SRR4302542.5145172/1‑94 (MQ=60)
GAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCC < SRR4302542.5252319/94‑1 (MQ=60)
AAACCCCGGTTCGCGTGCTGGACGAAGTAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCA < SRR4302542.2671754/94‑1 (MQ=60)
AAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCA > SRR4302542.2069996/1‑94 (MQ=60)
AAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCA < SRR4302542.2405268/94‑1 (MQ=60)
AAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCA > SRR4302542.1605607/1‑94 (MQ=60)
AACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAG < SRR4302542.5006501/94‑1 (MQ=60)
AACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAG > SRR4302542.5234066/1‑94 (MQ=60)
AACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAG < SRR4302542.3242156/94‑1 (MQ=60)
AACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAG < SRR4302542.471390/94‑1 (MQ=60)
CCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTC > SRR4302542.5294340/1‑94 (MQ=60)
CCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTC < SRR4302542.3423592/94‑1 (MQ=60)
CCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCG > SRR4302542.3708124/1‑94 (MQ=60)
CCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCG > SRR4302542.2812862/1‑94 (MQ=60)
CCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCG < SRR4302542.4604943/94‑1 (MQ=60)
CCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGG > SRR4302542.6539346/1‑94 (MQ=60)
CGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGA > SRR4302542.4569338/1‑94 (MQ=60)
CGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGA > SRR4302542.1289709/1‑94 (MQ=60)
CGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGA > SRR4302542.6727137/1‑94 (MQ=60)
GGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAA > SRR4302542.2873374/1‑94 (MQ=60)
GGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAA > SRR4302542.2256975/1‑94 (MQ=60)
GTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAAC > SRR4302542.4065103/1‑94 (MQ=60)
GTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAAC > SRR4302542.438814/1‑94 (MQ=60)
ttcggtgGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACA < SRR4302542.6245735/87‑1 (MQ=60)
CGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGT > SRR4302542.1047840/1‑94 (MQ=60)
CGTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTAT < SRR4302542.2850480/94‑1 (MQ=60)
CGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTAT > SRR4302542.3716719/1‑94 (MQ=60)
CGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTAT > SRR4302542.6666445/1‑94 (MQ=60)
GTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATC > SRR4302542.3230056/1‑94 (MQ=60)
GTGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATC < SRR4302542.7429022/94‑1 (MQ=60)
GTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATC > SRR4302542.6482404/1‑94 (MQ=60)
TGCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCT < SRR4302542.4485418/94‑1 (MQ=60)
TGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCT < SRR4302542.3984289/94‑1 (MQ=60)
tgcgggccgaaAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTC < SRR4302542.3911256/83‑1 (MQ=60)
GCTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTC > SRR4302542.4137908/1‑94 (MQ=60)
CTGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGGCAGTCGGAACAGTATCTCG > SRR4302542.1946487/1‑94 (MQ=60)
CTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCG < SRR4302542.5119221/94‑1 (MQ=60)
CTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCG < SRR4302542.1797918/94‑1 (MQ=60)
TGGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGG > SRR4302542.3186235/1‑94 (MQ=60)
TGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGG < SRR4302542.1693151/94‑1 (MQ=60)
GGACGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGC > SRR4302542.824944/1‑94 (MQ=60)
GGACGAAGAAGTCTCCACCGACCAGGGGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAAATCGCCAGTCGGGACAGTATCTCGGC > SRR4302542.6471351/1‑94 (MQ=60)
GACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCG < SRR4302542.5584986/94‑1 (MQ=60)
CGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCG > SRR4302542.7064071/1‑94 (MQ=60)
CGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCG < SRR4302542.4254131/94‑1 (MQ=60)
CGAAGAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCG > SRR4302542.1295443/1‑94 (MQ=60)
AGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGAT < SRR4302542.4552310/94‑1 (MQ=60)
GAAGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATT > SRR4302542.6103862/1‑94 (MQ=60)
GAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATT < SRR4302542.4927199/94‑1 (MQ=60)
AGTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGACCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTAT > SRR4302542.6919329/1‑94 (MQ=60)
AGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTAT < SRR4302542.6861623/94‑1 (MQ=60)
AGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTAT > SRR4302542.5563762/1‑94 (MQ=60)
GTCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATT > SRR4302542.5105532/1‑94 (MQ=60)
TCTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTT < SRR4302542.3441793/94‑1 (MQ=60)
CTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTT > SRR4302542.851220/1‑94 (MQ=60)
CTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTT > SRR4302542.3361775/1‑94 (MQ=60)
CTCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTT > SRR4302542.3361776/1‑94 (MQ=60)
TCCACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTC < SRR4302542.4857533/94‑1 (MQ=60)
TCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTC < SRR4302542.305546/94‑1 (MQ=60)
CCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCC > SRR4302542.1944680/1‑94 (MQ=60)
CCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCC < SRR4302542.6428428/94‑1 (MQ=60)
CACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCG < SRR4302542.113303/94‑1 (MQ=60)
CACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCG < SRR4302542.1593225/94‑1 (MQ=60)
CACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCG < SRR4302542.4219443/94‑1 (MQ=60)
CACCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCG < SRR4302542.5972366/94‑1 (MQ=60)
CCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCGGT < SRR4302542.4089727/94‑1 (MQ=60)
CCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCGGT > SRR4302542.6421484/1‑94 (MQ=60)
CCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCGGT < SRR4302542.5056419/94‑1 (MQ=60)
CCGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCGGT > SRR4302542.6851776/1‑94 (MQ=60)
CGACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCGGTG < SRR4302542.7357/94‑1 (MQ=60)
CGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCGGTG > SRR4302542.5568133/1‑94 (MQ=60)
GACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCGGTGA < SRR4302542.4747853/94‑1 (MQ=60)
GACCAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCGGTGA > SRR4302542.4842530/1‑94 (MQ=60)
GACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCGGTGA > SRR4302542.255648/1‑94 (MQ=60)
CAGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCGGTGAAAA < SRR4302542.7354868/94‑1 (MQ=60)
AGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCGGTGAAAAC < SRR4302542.4882698/94‑1 (MQ=60)
AGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCGGTGAAAAC < SRR4302542.5756927/94‑1 (MQ=60)
AGGTGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCGGTGAAAAC > SRR4302542.5405120/1‑94 (MQ=60)
GGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCGGTGAAAACC < SRR4302542.566925/94‑1 (MQ=60)
GCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCGGTGAAAACCA < SRR4302542.4571248/94‑1 (MQ=60)
TGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCGGTGAAAACCAC > SRR4302542.1360425/1‑94 (MQ=60)
CGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCGGTGAAAACCAC > SRR4302542.4189186/1‑94 (MQ=60)
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CAGTCTTCAAATGGGATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCGGTGAAAACCAC > NC_000913/4234268‑4234454
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
