Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCCGGTCCACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCTGGTGTGCCGGGCG > NC_000913/4344532‑4344718
|
CGCCGGTCCACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGG < SRR4302542.3318577/94‑1 (MQ=60)
CGCCGGTCCACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGG > SRR4302542.2429561/1‑94 (MQ=60)
CGCCGGTCCACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGG > SRR4302542.2431939/1‑94 (MQ=60)
CGCCGGTCCACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGG > SRR4302542.2285/1‑94 (MQ=60)
CGCCGGTCCACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGG < SRR4302542.232975/94‑1 (MQ=60)
CGCCGGTCCACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGA > SRR4302542.2695250/1‑94 (MQ=60)
CGCCGGTCCACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGA > SRR4302542.1492876/1‑94 (MQ=60)
AGCCGGTCCACACGCGCTGGCCTTTTTTCCCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGTAGCACGCCTTTGGCGGCGCTTTCGGA > SRR4302542.118112/1‑94 (MQ=60)
GCCGGTCCACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGG < SRR4302542.6075495/94‑1 (MQ=60)
GCCGGTCCACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAG > SRR4302542.4040098/1‑94 (MQ=60)
CGGTCCACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCGCGCCTTTGGCGGCGATTTCGGGGTT < SRR4302542.4215136/94‑1 (MQ=60)
CGGTCCACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTT < SRR4302542.2864357/94‑1 (MQ=60)
CGGTCCACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTT < SRR4302542.7095803/94‑1 (MQ=60)
CGGTCCACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTT > SRR4302542.5118321/1‑94 (MQ=60)
CGGTCCACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTT > SRR4302542.3368528/1‑94 (MQ=60)
GGTCCACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTT > SRR4302542.910155/1‑94 (MQ=60)
TCCACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCT < SRR4302542.2784287/94‑1 (MQ=60)
TCCACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCT < SRR4302542.1160369/94‑1 (MQ=60)
CCACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTT > SRR4302542.6896275/1‑94 (MQ=60)
CACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGGTTTCGGGGTTTCTTA > SRR4302542.5597944/1‑94 (MQ=60)
CACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTA > SRR4302542.5713123/1‑94 (MQ=60)
CACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTA < SRR4302542.704822/94‑1 (MQ=60)
ACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAA > SRR4302542.5517867/1‑94 (MQ=60)
ACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAA < SRR4302542.3853565/94‑1 (MQ=60)
ACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAA < SRR4302542.3148583/94‑1 (MQ=60)
CACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGTGATTTCGGAGTTTCTTAAG < SRR4302542.1105023/94‑1 (MQ=60)
CACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAG > SRR4302542.1318319/1‑94 (MQ=60)
CGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATT > SRR4302542.5515638/1‑94 (MQ=60)
CGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATT < SRR4302542.1518343/94‑1 (MQ=60)
GCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTG < SRR4302542.1010687/94‑1 (MQ=60)
CTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGC > SRR4302542.6298037/1‑94 (MQ=60)
CTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGC < SRR4302542.3169987/94‑1 (MQ=60)
CTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGC < SRR4302542.6631465/94‑1 (MQ=60)
CTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGC > SRR4302542.4477395/1‑94 (MQ=60)
CTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGC > SRR4302542.1126724/1‑94 (MQ=60)
TGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCA > SRR4302542.1011315/1‑94 (MQ=60)
TGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCA < SRR4302542.186856/94‑1 (MQ=60)
TGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCA < SRR4302542.6370892/94‑1 (MQ=60)
TGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCA < SRR4302542.6832463/94‑1 (MQ=60)
TGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCA < SRR4302542.4867510/94‑1 (MQ=60)
TGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCA > SRR4302542.5967398/1‑94 (MQ=60)
GGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAG < SRR4302542.7166603/94‑1 (MQ=60)
GGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCAG > SRR4302542.1415111/1‑94 (MQ=60)
TCCTTTTTTACCGACGTTGATCGCGGTGCCGGTAACCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGC < SRR4302542.4262196/94‑1 (MQ=60)
GCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGC > SRR4302542.5608887/1‑94 (MQ=60)
GCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCAGC > SRR4302542.6734885/1‑94 (MQ=60)
GCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCAGC < SRR4302542.7385969/94‑1 (MQ=60)
GCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCAGC < SRR4302542.3683557/94‑1 (MQ=60)
CCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCG < SRR4302542.1574782/94‑1 (MQ=60)
CCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCG > SRR4302542.2952533/1‑94 (MQ=60)
CTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGC < SRR4302542.5067136/94‑1 (MQ=60)
CTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGC > SRR4302542.1672702/1‑94 (MQ=60)
CTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGC > SRR4302542.5364693/1‑94 (MQ=60)
CTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGC > SRR4302542.1816314/1‑94 (MQ=60)
TTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCAC < SRR4302542.1939080/94‑1 (MQ=60)
TTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACG < SRR4302542.159217/94‑1 (MQ=60)
TTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGGTTCTTAAGAATTGCAGCGCCACG > SRR4302542.1310866/1‑94 (MQ=60)
TTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGT < SRR4302542.4116756/94‑1 (MQ=60)
TTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGT > SRR4302542.1747045/1‑94 (MQ=60)
TACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTA > SRR4302542.6062230/1‑94 (MQ=60)
CGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTT < SRR4302542.6815544/94‑1 (MQ=60)
CGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTT < SRR4302542.299611/94‑1 (MQ=60)
GACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCAGCGCCACGTACTTG < SRR4302542.2418779/94‑1 (MQ=60)
ACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCAGCGCCACGTACTTGT > SRR4302542.6139943/1‑94 (MQ=60)
CGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTC < SRR4302542.568545/94‑1 (MQ=60)
CGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCAGCGCCACGTACTTGTC < SRR4302542.6060993/94‑1 (MQ=60)
GATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGCTTTCGGAGTTTCTTAAGAATTGCAGCGCCACGTACTTGGNG > SRR4302542.2620926/1‑94 (MQ=60)
GATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCG < SRR4302542.2659050/94‑1 (MQ=60)
ATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGT < SRR4302542.3153630/94‑1 (MQ=60)
TGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTT < SRR4302542.3085284/94‑1 (MQ=60)
GATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTT > SRR4302542.2311008/1‑94 (MQ=60)
GATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTT > SRR4302542.1241929/1‑94 (MQ=60)
TCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTC < SRR4302542.564771/94‑1 (MQ=60)
CGCGGTGCCGGTATCCTGGCGGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCG < SRR4302542.4872662/94‑1 (MQ=60)
CGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCG < SRR4302542.2787315/94‑1 (MQ=60)
CGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCT < SRR4302542.5347760/94‑1 (MQ=60)
GGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTG < SRR4302542.3248034/94‑1 (MQ=60)
TGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGC < SRR4302542.5308345/94‑1 (MQ=60)
GCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCT > SRR4302542.1602018/1‑94 (MQ=60)
CCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTT > SRR4302542.3977655/1‑94 (MQ=60)
CCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTT < SRR4302542.5063532/94‑1 (MQ=60)
GGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCT < SRR4302542.6675960/94‑1 (MQ=60)
GGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCT > SRR4302542.2766205/1‑94 (MQ=60)
GGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCT > SRR4302542.3120052/1‑94 (MQ=60)
GGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCT > SRR4302542.700425/1‑94 (MQ=60)
GTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTG > SRR4302542.6936158/1‑94 (MQ=60)
GTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTG > SRR4302542.2855213/1‑94 (MQ=60)
GTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTG < SRR4302542.2022559/94‑1 (MQ=60)
TATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGG > SRR4302542.1593803/1‑94 (MQ=60)
TATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGG < SRR4302542.1655367/94‑1 (MQ=60)
TATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTAG < SRR4302542.2444669/94‑1 (MQ=60)
ATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGA > SRR4302542.1367641/1‑94 (MQ=60)
ATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGA > SRR4302542.350251/1‑94 (MQ=60)
ATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGA > SRR4302542.5269744/1‑94 (MQ=60)
CCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATC > SRR4302542.350201/1‑94 (MQ=60)
CTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCG < SRR4302542.7403457/94‑1 (MQ=60)
TGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGT > SRR4302542.6764393/1‑94 (MQ=60)
GGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTG < SRR4302542.7333074/94‑1 (MQ=60)
CAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAA < SRR4302542.2923106/94‑1 (MQ=60)
CAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAA < SRR4302542.2430980/94‑1 (MQ=60)
CAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAA > SRR4302542.121941/1‑94 (MQ=60)
CAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAA < SRR4302542.1909587/94‑1 (MQ=60)
AGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAG < SRR4302542.6430964/94‑1 (MQ=60)
AGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAG < SRR4302542.6068797/94‑1 (MQ=60)
AGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAG > SRR4302542.6828509/1‑94 (MQ=60)
GGTCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGA < SRR4302542.1266521/94‑1 (MQ=60)
TCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAAT < SRR4302542.1929254/94‑1 (MQ=60)
TCGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAAT > SRR4302542.3441535/1‑94 (MQ=60)
CGGCAGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATA < SRR4302542.7134061/94‑1 (MQ=60)
GGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAG < SRR4302542.4985194/94‑1 (MQ=60)
AGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCG > SRR4302542.1445493/1‑94 (MQ=60)
AGCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCG > SRR4302542.4070101/1‑94 (MQ=60)
GCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGC < SRR4302542.4023515/94‑1 (MQ=60)
GCACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGC > SRR4302542.869001/1‑94 (MQ=60)
CACGCCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCA > SRR4302542.2595842/1‑94 (MQ=60)
CGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAAC < SRR4302542.2907316/94‑1 (MQ=60)
CCTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCT < SRR4302542.925677/94‑1 (MQ=60)
CTTTGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTG > SRR4302542.5751419/1‑94 (MQ=60)
CTNNNGCGGCGANNNNNGGGTTTCNNAAGANTTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTG > SRR4302542.6301139/1‑94 (MQ=60)
TGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTT < SRR4302542.5029851/94‑1 (MQ=60)
TGGCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTT > SRR4302542.4741256/1‑94 (MQ=60)
TGGCGGCGATTTCGGAGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTT < SRR4302542.129638/94‑1 (MQ=60)
GCGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCT < SRR4302542.4011283/94‑1 (MQ=60)
CGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTTCTTGTCGTTTTCGCTGGCTTCTGGATCGTGGAGAAGAGCCGCAACCCGTTTCTG > SRR4302542.6935418/1‑94 (MQ=60)
CGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCTG > SRR4302542.1681444/1‑94 (MQ=60)
CGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCTG > SRR4302542.5426176/1‑94 (MQ=60)
CGGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCTG < SRR4302542.2092045/94‑1 (MQ=60)
GGCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCTGG > SRR4302542.1563006/1‑94 (MQ=60)
GGCGATTTCGGAGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCTGG < SRR4302542.6014865/94‑1 (MQ=60)
GCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCTGGT < SRR4302542.3079311/94‑1 (MQ=60)
GCGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCTGGT < SRR4302542.4434790/94‑1 (MQ=60)
CGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCTGGTG > SRR4302542.4297203/1‑94 (MQ=60)
CGATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCTGGTG < SRR4302542.94870/94‑1 (MQ=60)
GATTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCTGGTGT > SRR4302542.1957794/1‑94 (MQ=60)
ATTTCGGAGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCTGGTGTG > SRR4302542.6146307/1‑94 (MQ=60)
TTTCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCTGGTGTGC > SRR4302542.6736849/1‑94 (MQ=60)
TCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCTGGTGTGCCG > SRR4302542.2524919/1‑94 (MQ=60)
TCGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCTGGTGTGCCG < SRR4302542.4904651/94‑1 (MQ=60)
CGGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCTGGTGTGCCGG > SRR4302542.1434599/1‑94 (MQ=60)
GGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCTGGTGTGCCGGG < SRR4302542.5866625/94‑1 (MQ=60)
GGGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCTGGTGTGCCGGG < SRR4302542.7250789/94‑1 (MQ=60)
GGGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCTGGTGTGCCGGGC < SRR4302542.1949592/94‑1 (MQ=60)
GGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCTGGTGTGCCGGGCG > SRR4302542.677664/1‑94 (MQ=60)
GGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCTGGTGTGCCGGGCG < SRR4302542.2315540/94‑1 (MQ=60)
GGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCTGGTGTGCCGGGCG < SRR4302542.2251225/94‑1 (MQ=60)
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CGCCGGTCCACACGCGCTGGCCTTTTTTACCGACGATGATCGCGGTGCCGGTATCCTGGCAGGTCGGCAGCACGCCTTTGGCGGCGATTTCGGAGTTTCTTAAGAATTGCAGCGCCACGTACTTGTCGTTTTCGCTGGCTTCTGGATCGTGAAGAATAGCCGCAACCTGTTTCTGGTGTGCCGGGCG > NC_000913/4344532‑4344718
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
