Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A0 F0 I1 R1
|
245 |
579.6 |
28867798 |
97.7% |
28203838 |
96.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,957,551 |
+T |
intergenic (‑120/‑741) |
ppiC ← / → rep |
peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,957,550 | 1 | . | T | 99.4%
| 1274.5
/ ‑1.4
| 332 | intergenic (‑119/‑742) | ppiC/rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base T (110/218); total (112/220) |
| Fisher's exact test for biased strand distribution p-value = 1.15e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 364 total aligned reads displayed.
TTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CC‑‑T‑G‑‑C‑TCGCA‑G‑G‑T‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATT > NC_000913/3957467‑3957632
|
ttttAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTTCATATATGGCAAAA‑GACCGGGAAAT‑CCG‑G‑G‑‑CGTCGCA‑G‑G‑T‑cc > 2:4450395/1‑96 (MQ=255)
ttttAGCAGGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑T‑cc < 2:6380841/96‑1 (MQ=255)
tttAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTTGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑T‑ccc < 2:12040783/96‑2 (MQ=255)
tttAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGGCCCGGAAATC‑CC‑‑G‑G‑‑CTTCGCA‑G‑G‑T‑ccc > 1:9508448/1‑95 (MQ=255)
tttAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAA‑GCCCGGGAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑T‑ccc > 2:6135437/1‑95 (MQ=255)
ttAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑T‑ccct > 2:7806618/1‑94 (MQ=255)
tAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑T‑ccctc < 2:906366/96‑4 (MQ=255)
tAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑T‑ccctc < 1:13511849/96‑4 (MQ=255)
tAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAA‑GACCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑T‑ccctc > 1:1007390/1‑93 (MQ=255)
aGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑T‑ccctca < 2:6929436/96‑5 (MQ=255)
cATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAg < 1:11921447/96‑1 (MQ=255)
cATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAg < 2:11681308/96‑1 (MQ=255)
aTGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAgg > 1:878115/1‑96 (MQ=255)
aTGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CC‑‑GGG‑‑CTTCGCA‑G‑G‑TCCCTCAAgg < 1:13772995/96‑1 (MQ=255)
tGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAggg > 2:7524271/1‑96 (MQ=255)
gATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAGT‑CCG‑G‑G‑‑CTTCGCA‑G‑GAC‑CCTCAAgggg < 2:12721233/96‑1 (MQ=255)
aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAA‑ACCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCAGG‑G‑C‑CCTCAAGGGga > 1:5436625/1‑96 (MQ=255)
tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGgag < 2:5650829/96‑1 (MQ=255)
tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑ACCCGGAAAAT‑CCG‑G‑G‑‑CGTTGCA‑G‑G‑TCCCTCAAGGGgag > 1:2792066/1‑96 (MQ=255)
gCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGaaa < 2:13032093/96‑1 (MQ=255)
gCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGGAAAA‑GCCCGGGAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGgaa > 1:5365329/1‑96 (MQ=255)
gCAGATGCTAACGAAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAATCCC‑‑G‑G‑‑CTTCGCA‑G‑G‑TCCCCCCAGGGGAGaaa > 2:8411741/1‑96 (MQ=255)
cAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TGCCTCAAGGGGAGaaaa > 2:13495099/1‑96 (MQ=255)
aGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAAc < 2:4055451/96‑1 (MQ=255)
taTGCTAACGTAAATGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCC‑G‑G‑TCCCTCAAGGGGGGAAAACt > 1:13887132/2‑96 (MQ=255)
aTGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACtg < 1:11290610/96‑2 (MQ=255)
gCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAACA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAg < 2:2039638/96‑1 (MQ=255)
gCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAg < 1:8552099/96‑1 (MQ=255)
cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAgg > 1:12488161/1‑96 (MQ=255)
cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCACGGAAAAT‑CC‑‑G‑GGTT‑TCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAgg < 2:5289619/96‑1 (MQ=255)
tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGGAAAA‑GCCCGGAAAAA‑CC‑‑TGG‑‑CGTCGCA‑GAC‑C‑CCCCAAGGGGAGAAAACTTCggg > 1:9712166/1‑96 (MQ=255)
tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACGTAggg > 1:6613612/1‑96 (MQ=255)
tAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAggg > 2:5991274/1‑96 (MQ=255)
catAATTGTCAGTCAGGGAGTGGCTGGTACATATCTGGGCAAA‑GCCCGGAAAAT‑CCGGG‑G‑‑C‑TCGCAGG‑G‑C‑CCTCAAGGGGAGAAAACCTAGGGCct > 1:3408379/3‑96 (MQ=255)
cGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCct > 1:12940359/1‑96 (MQ=255)
gTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGGAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCTAGGGGAGAAAAATTAAGGCctc > 2:4636861/1‑96 (MQ=255)
gTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCctc > 1:1093391/1‑96 (MQ=255)
gTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCctc > 1:1814160/1‑96 (MQ=255)
tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCctct > 2:11482654/1‑96 (MQ=255)
tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCctct < 2:14383100/96‑1 (MQ=255)
agtggtcagtcgGGGGGGGGCTGGTACATATATGCAAAAA‑GCCCGAAAAGG‑CCG‑G‑G‑‑CATCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTa < 1:7223885/92‑1 (MQ=255)
aaTTGTCAGTCAGGGAGTGGCTGGTACCTATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCCAGGGGAGAAAAATTAGGGCCTCTa > 1:11186625/1‑96 (MQ=255)
aaTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTa < 1:9251436/96‑1 (MQ=255)
aaTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTa < 2:10765216/96‑1 (MQ=255)
aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTAt > 2:11573092/1‑96 (MQ=255)
aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTAt > 2:2166011/1‑96 (MQ=255)
ttGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg < 1:5800985/96‑1 (MQ=255)
ttGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg < 2:10357353/96‑1 (MQ=255)
tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATgg < 1:13598148/96‑1 (MQ=255)
gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATggg > 2:7166103/1‑96 (MQ=255)
tcagtcagGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc > 2:9291577/1‑96 (MQ=255)
tcagtcagGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc < 1:13224112/96‑1 (MQ=255)
cagtcagGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCAGG‑G‑C‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt > 1:3811850/1‑96 (MQ=255)
gtcagGGAGTGGCTGGTACATATATGGCAAAA‑ACCCGGAAAATCCC‑‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc > 2:11830517/1‑96 (MQ=255)
tcagGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa < 1:7565511/96‑1 (MQ=255)
tcagGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa < 2:6688139/96‑1 (MQ=255)
agGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa < 2:1098528/96‑1 (MQ=255)
agGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CC‑‑GGG‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa > 2:12429792/1‑96 (MQ=255)
gAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc < 1:12232681/96‑1 (MQ=255)
aGTGGCTGGTACATATATGTCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa < 1:4496507/96‑1 (MQ=255)
aGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa < 1:14362567/96‑1 (MQ=255)
gCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt < 1:8965929/96‑1 (MQ=255)
cTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTagc < 1:11830517/96‑3 (MQ=255)
cTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc < 1:11552940/96‑1 (MQ=255)
tGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCg > 2:5893996/1‑96 (MQ=255)
tGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCg < 2:3343510/96‑1 (MQ=255)
gTACATATATGGCAAAA‑GCCCGGAAGAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg < 1:6949602/96‑1 (MQ=255)
gTACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg < 1:7850976/96‑1 (MQ=255)
tACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCT‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTAAGGGCTACAAAGTCATTATCgggg > 2:12618459/1‑96 (MQ=255)
tACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg > 2:6611685/1‑96 (MQ=255)
tACATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg < 1:3325854/96‑1 (MQ=255)
aCATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa > 2:5409527/1‑96 (MQ=255)
cATATATGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAt < 1:4321708/96‑1 (MQ=255)
atatatGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAATCTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg < 2:10817354/96‑1 (MQ=255)
atatatGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg < 2:1404761/96‑1 (MQ=255)
atatatGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg < 2:7470129/96‑1 (MQ=255)
atatGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt < 1:1671771/96‑1 (MQ=255)
atatGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt > 2:9641887/1‑96 (MQ=255)
atGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtta < 2:695480/96‑1 (MQ=255)
atGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtta < 2:8213420/96‑1 (MQ=255)
atGGCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtta > 1:2234212/1‑96 (MQ=255)
atGGCAAAA‑GCCCGGAAAAT‑CC‑‑GGG‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtta > 2:11265868/1‑96 (MQ=255)
ggCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt < 2:3596404/96‑1 (MQ=255)
ggCAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt < 2:1944487/96‑1 (MQ=255)
cAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttt < 2:6035300/96‑1 (MQ=255)
cAAAA‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttt < 1:6141914/96‑1 (MQ=255)
aaaa‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGATAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGgtatttaa > 1:10557638/1‑94 (MQ=255)
aaaa‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttta > 2:13610565/1‑96 (MQ=255)
aaaa‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttta < 2:2832256/96‑1 (MQ=255)
aaaa‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttta < 1:4978887/96‑1 (MQ=255)
aaaa‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttta < 1:3667821/96‑1 (MQ=255)
aaaa‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttta > 2:4202633/1‑96 (MQ=255)
aaa‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAATTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat < 2:1598951/96‑1 (MQ=255)
aa‑GCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt < 2:14152438/96‑1 (MQ=255)
aa‑GCCCGGAAAAT‑CC‑‑GGG‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt > 1:3136911/1‑96 (MQ=255)
gCCCGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGt < 1:8273553/96‑1 (MQ=255)
cccGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTc < 2:11322051/96‑1 (MQ=255)
cGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCaa < 2:878115/96‑1 (MQ=255)
cGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCa > 2:2483130/1‑95 (MQ=255)
cGGAAAAT‑CCG‑G‑G‑‑CTTCGCA‑G‑G‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCa < 1:2483130/95‑1 (MQ=255)
|
TTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAA‑GCCCGGAAAAT‑CC‑‑T‑G‑‑C‑TCGCA‑G‑G‑T‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATT > NC_000913/3957467‑3957632
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑TG‑‑C‑‑TCGCA‑GGT‑C‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATT > NC_000913/3957470‑3957650
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TAGCAGGATCCGCAGATGCTAGCGTACATGTCAGTCAGGGAGTGGCTGGTACATATATGGCACAAGCCCTGAAAATCC‑‑GG‑‑CATTCGCA‑GGTCC‑CTCAAGGG < SRR4302518.5618985/101‑1 (MQ=47)
GCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGACCGGAAAATCC‑‑GGGCC‑‑TCGCA‑GGTCC‑CTCAAGGNNN > SRR4302518.7575210/1‑101 (MQ=60)
NNNGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAG < SRR4302518.11687171/101‑1 (MQ=60)
NNNATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGA < SRR4302518.10063703/101‑1 (MQ=60)
ATGGTCGGCAGATGCTAACGTAATTGTCAGGCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCCGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGA > SRR4302518.2379637/1‑101 (MQ=56)
ATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGA < SRR4302518.1576767/101‑1 (MQ=60)
NNNCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAA < SRR4302518.13989775/101‑1 (MQ=60)
NNNCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAA < SRR4302518.9116865/101‑1 (MQ=60)
ATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAA < SRR4302518.348262/101‑1 (MQ=60)
ATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAACCCGGAAAATCC‑‑GGGCT‑‑TCGCAGGGC‑C‑CTCAAGGGGAGAAAA > SRR4302518.5713962/1‑101 (MQ=60)
TCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAACCCGGAAAATCC‑‑GGGCG‑‑TTGCA‑GGTCC‑CTCAAGGGGAGAAAAC > SRR4302518.2924380/1‑101 (MQ=60)
NNNAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTG < SRR4302518.11819292/101‑1 (MQ=60)
GCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGGAAAAGCCCGGGAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGGAAACTTA > SRR4302518.5640031/1‑101 (MQ=58)
NNNATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAG < SRR4302518.8969047/101‑1 (MQ=60)
CAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAG > SRR4302518.6085551/1‑101 (MQ=60)
NNNTGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGG < SRR4302518.11740051/101‑1 (MQ=60)
AGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGG < SRR4302518.3081653/101‑1 (MQ=60)
NNNGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGG < SRR4302518.7531749/101‑1 (MQ=60)
GATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGG < SRR4302518.735030/101‑1 (MQ=60)
tcctaccgtaatggtaagtgaggggGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCC < SRR4302518.4582945/76‑1 (MQ=60)
TGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCCAGGGGAGCAAACCTAGGGCC > SRR4302518.2912087/1‑101 (MQ=60)
GCTAACGTACTTGTCAGTCAGGGAGTGGCTGGTCCATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCT < SRR4302518.3013597/101‑1 (MQ=60)
GCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGNNN > SRR4302518.14832096/1‑101 (MQ=60)
CTAACGTAATTGTCAGTCAGGGAGTGGTTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTC < SRR4302518.7295223/101‑1 (MQ=60)
CTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCNNN > SRR4302518.13075274/1‑101 (MQ=60)
TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCTCA‑GGTCC‑CTCCAGGGGAGAAAACTTAGGGCCTCT > SRR4302518.141046/1‑101 (MQ=60)
TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCT < SRR4302518.5680513/101‑1 (MQ=60)
TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCT > SRR4302518.281967/1‑101 (MQ=60)
TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCT < SRR4302518.1821242/101‑1 (MQ=60)
TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCT > SRR4302518.1771939/1‑101 (MQ=60)
TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACGTAGGGCCTCT > SRR4302518.6954388/1‑101 (MQ=60)
NNNCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCT < SRR4302518.12503497/101‑1 (MQ=60)
NNNCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCT < SRR4302518.9725078/101‑1 (MQ=60)
NNNGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTA < SRR4302518.8467222/101‑1 (MQ=60)
NNNGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTA < SRR4302518.9697759/101‑1 (MQ=60)
NNNTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTAT < SRR4302518.9603675/101‑1 (MQ=60)
ACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGGAAACTTAGGGCCTCTAT > SRR4302518.416851/1‑101 (MQ=60)
ACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTAT < SRR4302518.3629743/101‑1 (MQ=60)
CGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAACTCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATG < SRR4302518.4047853/101‑1 (MQ=60)
CGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTNNN > SRR4302518.8897649/1‑101 (MQ=60)
CGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTNNN > SRR4302518.13540418/1‑101 (MQ=60)
CGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATG < SRR4302518.6094826/101‑1 (MQ=60)
CATAATTGTCAGTCAGGGAGTGGCTGGTACATATCTGGGCAAAGCCCGGAAAATCCGGGG‑‑C‑‑TCGCAGGGC‑C‑CTCAAGGGGAGAAAACCTAGGGCCTCTATG > SRR4302518.3567180/1‑101 (MQ=54)
NNNATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGG < SRR4302518.14221825/101‑1 (MQ=60)
GTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGG > SRR4302518.1136590/1‑101 (MQ=60)
GTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGG < SRR4302518.3567353/101‑1 (MQ=60)
GTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGG < SRR4302518.6544260/101‑1 (MQ=60)
GTAATTGTCAGTCAGGGAGTGGCTGGTACAAATATCGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAAGGGAGAAAACTTAGGGCCTCTANNN > SRR4302518.11996246/1‑101 (MQ=60)
GTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGG > SRR4302518.1895676/1‑101 (MQ=60)
GTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTANNN > SRR4302518.12907565/1‑101 (MQ=60)
GTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTANNN > SRR4302518.14402242/1‑101 (MQ=60)
nnngtagtggtcagtcgggggggggctggtacatatatgcaaaaagcccgaaaaggccgggcaTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTA < SRR4302518.7602031/38‑1 (MQ=56)
TAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCTAGGGGAGAAAACTTAGGGCCTCTATNNN > SRR4302518.7976636/1‑101 (MQ=60)
GAATTGTGAGTCAGGTAGTGGCTGGTACTTATATGGCAAAAGCACGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGG < SRR4302518.228021/101‑1 (MQ=56)
NNNTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGC < SRR4302518.13833995/101‑1 (MQ=60)
AATTGTCAGTCAGGGAGTGGCTGGTACCTATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCCAGGGGAGAAAAATTAGGGCCTCTATGNNN > SRR4302518.11710298/1‑101 (MQ=60)
AATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGC < SRR4302518.3893274/101‑1 (MQ=60)
AATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGC > SRR4302518.978370/1‑101 (MQ=60)
NNNGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGGT < SRR4302518.12399175/101‑1 (MQ=60)
ATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAACCCGGAAAAACC‑‑GGGCT‑‑TCGCAGGGC‑C‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGNNN > SRR4302518.8906665/1‑101 (MQ=60)
ATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGNNN > SRR4302518.7977705/1‑101 (MQ=60)
TGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCNNN > SRR4302518.11432576/1‑101 (MQ=60)
TGTCAGTCAGGGAGGGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAC > SRR4302518.7055628/1‑101 (MQ=60)
NNNAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACA < SRR4302518.7952923/101‑1 (MQ=60)
GTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACA < SRR4302518.2345640/101‑1 (MQ=60)
TCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTATGGCCTCTATGGGCTANNN > SRR4302518.7809337/1‑101 (MQ=60)
NNNGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAA < SRR4302518.9169899/101‑1 (MQ=60)
CAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCAGGGC‑C‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAA > SRR4302518.3991972/1‑101 (MQ=60)
GTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGT < SRR4302518.3322779/101‑1 (MQ=60)
NNNGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTC < SRR4302518.12812048/101‑1 (MQ=60)
NNNGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGGC < SRR4302518.7910582/101‑1 (MQ=60)
NNNGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCA < SRR4302518.15027820/101‑1 (MQ=60)
CAGGGAGTGGCTGGTACATATATGTCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCA < SRR4302518.4730168/101‑1 (MQ=60)
CAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCA < SRR4302518.6001515/101‑1 (MQ=60)
NNNGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAT < SRR4302518.9528493/101‑1 (MQ=60)
AGGGAGTGGCTGGAACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTNNN > SRR4302518.14511499/1‑101 (MQ=60)
GGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATT < SRR4302518.5648789/101‑1 (MQ=60)
GAGAGTGGGTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCNNN > SRR4302518.11017220/1‑101 (MQ=60)
GGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCANNN > SRR4302518.12486432/1‑101 (MQ=60)
NNNTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT < SRR4302518.9399546/101‑1 (MQ=60)
GAGTTGCTAGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT < SRR4302518.1697891/101‑1 (MQ=60)
GAGTGGTTGGTACATATAGGGAAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT < SRR4302518.142/101‑1 (MQ=60)
GAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT < SRR4302518.4361657/101‑1 (MQ=60)
NNNGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC < SRR4302518.12096631/101‑1 (MQ=60)
NNNGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC < SRR4302518.9065161/101‑1 (MQ=60)
NNNGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAGC < SRR4302518.12393545/101‑1 (MQ=60)
AGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACCAAGTCATTNNN > SRR4302518.7525965/1‑101 (MQ=60)
AGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC < SRR4302518.1232357/101‑1 (MQ=60)
AGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC < SRR4302518.4679144/101‑1 (MQ=60)
GTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCG < SRR4302518.1173978/101‑1 (MQ=60)
TGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGG < SRR4302518.351418/101‑1 (MQ=60)
TGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGG < SRR4302518.1471477/101‑1 (MQ=60)
nnngggcgtgtacatacaggtaaaaaccccggaaaacccgggctTCGCA‑GGT‑C‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC < SRR4302518.9975507/57‑1 (MQ=60)
NNNTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGG < SRR4302518.9284008/101‑1 (MQ=60)
NNNTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGG < SRR4302518.8091898/101‑1 (MQ=60)
NNNTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGG < SRR4302518.8245864/101‑1 (MQ=60)
GGCTGGTACATATATGGCAAAAGCCCGGAAGATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGG < SRR4302518.7318749/101‑1 (MQ=60)
GGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCNNN > SRR4302518.8883760/1‑101 (MQ=60)
GGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGCAGAAAACTTAGGGCCTCTATCGGCTACAAAGTCACTATCNNN > SRR4302518.14472021/1‑101 (MQ=60)
GCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGG < SRR4302518.3480806/101‑1 (MQ=60)
NNNGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGA < SRR4302518.9439031/101‑1 (MQ=60)
NNNGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGA < SRR4302518.12081815/101‑1 (MQ=60)
NNNGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATCATCGGGAA < SRR4302518.13591668/101‑1 (MQ=60)
CTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCGACAAAGCCCTTAGCGGGGA > SRR4302518.5133954/1‑101 (MQ=60)
TGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAT < SRR4302518.4537149/101‑1 (MQ=60)
GGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGNNN > SRR4302518.11799500/1‑101 (MQ=60)
NNNACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATG < SRR4302518.14339926/101‑1 (MQ=60)
GTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGG < SRR4302518.6272583/101‑1 (MQ=60)
TACATCTATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGT < SRR4302518.364915/101‑1 (MQ=60)
TACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGT < SRR4302518.1745450/101‑1 (MQ=60)
NNNATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCACTATCGGGGATGGT < SRR4302518.14494940/101‑1 (MQ=60)
NNNTATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTT < SRR4302518.13741051/101‑1 (MQ=60)
NNNATATGGCAAAAGCCAGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGATAAAACTTAGCGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTA < SRR4302518.11401611/101‑1 (MQ=60)
ATATTTGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTAC‑CTCAAGGAGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTNNN > SRR4302518.13187808/1‑101 (MQ=60)
ATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTAT < SRR4302518.5129979/101‑1 (MQ=60)
ATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTAT < SRR4302518.621319/101‑1 (MQ=60)
TATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTNNN > SRR4302518.12522967/1‑101 (MQ=60)
TATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTNNN > SRR4302518.14181546/1‑101 (MQ=60)
TATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTT < SRR4302518.6454248/101‑1 (MQ=60)
NNNGGCAAAAGCCTGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTT < SRR4302518.11736929/101‑1 (MQ=60)
NNNGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGCGGATGGTTATTTT < SRR4302518.11504679/101‑1 (MQ=60)
NNNGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTCA < SRR4302518.12020840/101‑1 (MQ=60)
ATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTA < SRR4302518.3839843/101‑1 (MQ=60)
ATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTA < SRR4302518.5237616/101‑1 (MQ=60)
ATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTA > SRR4302518.2342174/1‑101 (MQ=60)
ATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTNNN > SRR4302518.8674923/1‑101 (MQ=60)
NNNAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTAGT < SRR4302518.9867986/101‑1 (MQ=60)
GGCACAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGTGAAAACTTAGGGCCTCTATGGGGTACAAAGTCATTATCGGGGATGGTTATTTTATT < SRR4302518.3944426/101‑1 (MQ=60)
GGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATT < SRR4302518.6295183/101‑1 (MQ=60)
NNNAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT < SRR4302518.8681408/101‑1 (MQ=60)
AAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGATAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGGTATTTAATTNNN > SRR4302518.11052403/1‑101 (MQ=60)
AAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTNNN > SRR4302518.9380592/1‑101 (MQ=60)
AAAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTC < SRR4302518.3267613/101‑1 (MQ=60)
AAAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCA < SRR4302518.3541229/101‑1 (MQ=60)
AAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTNNN > SRR4302518.12270714/1‑101 (MQ=60)
AAGCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAA > SRR4302518.3283664/1‑101 (MQ=60)
nnnaagcccggaaactccgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT < SRR4302518.12741757/78‑1 (MQ=60)
NNNCGGAAAATCCG‑TG‑‑CT‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTATGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATT < SRR4302518.10652971/101‑1 (MQ=60)
GCCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATT > SRR4302518.2118733/1‑101 (MQ=60)
cgatctcggaaaatccgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCA < SRR4302518.2602852/80‑1 (MQ=60)
CCCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTT < SRR4302518.1074900/101‑1 (MQ=60)
CCGGAAAATCC‑‑GGGCT‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGACTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTA > SRR4302518.5260149/1‑101 (MQ=60)
nnnccggaaaatccgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAAT < SRR4302518.9038018/82‑1 (MQ=60)
agccaggaaaatccgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAAT > SRR4302518.1229991/20‑101 (MQ=60)
nnngaaaatccgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTA < SRR4302518.8200438/85‑1 (MQ=60)
nnngaaaatccgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTA < SRR4302518.14544240/85‑1 (MQ=60)
nnngaaaatccgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTA < SRR4302518.7753062/85‑1 (MQ=60)
cggaaaatccgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTAT < SRR4302518.520270/86‑1 (MQ=60)
cggaaaatccgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTAT < SRR4302518.597509/86‑1 (MQ=60)
cggaaaatccgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTAT < SRR4302518.2879911/86‑1 (MQ=60)
cggaaaatccgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAGGGTTATTTTATTGTAATTTTAT > SRR4302518.1906677/16‑101 (MQ=60)
nnnaaatccgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGTATGGTTATTTTATTGTCAATTTATG < SRR4302518.7465380/87‑1 (MQ=60)
nnnaaatccgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTACG < SRR4302518.12305224/87‑1 (MQ=60)
ggacaatccgggctTCGCA‑GGTCC‑CTCAAGTGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATG < SRR4302518.1345152/87‑1 (MQ=60)
ggaaaatccgggctTCGCA‑GGT‑CGCTCAAGGGGAGACAACTTAGGGCCTCTATGGGCTACAAAGTCATTACCGGGGATGGTTATTTTATTGTCAATTTATG < SRR4302518.6500985/87‑1 (MQ=60)
nnnaatccgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGA < SRR4302518.10338271/88‑1 (MQ=60)
nnnaatccgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGA < SRR4302518.10861418/88‑1 (MQ=60)
nnnaatccgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATAA < SRR4302518.11591227/88‑1 (MQ=60)
gaaaatccgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGA > SRR4302518.4294705/14‑101 (MQ=60)
nnnatccgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAG < SRR4302518.12417027/89‑1 (MQ=60)
aaatccgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCTGGGAGGGTTATTTTATTGTCAATTTATGAtg > SRR4302518.3974692/12‑99 (MQ=60)
aaatccgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGC < SRR4302518.4402226/90‑1 (MQ=60)
aatccgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGANNN > SRR4302518.7628423/11‑101 (MQ=60)
atccgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGGTGGGTATTTTATTGTCAATGTTTGAGCGA > SRR4302518.6988341/10‑101 (MQ=60)
atccgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGA < SRR4302518.3771117/92‑1 (MQ=60)
nnngggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGAT < SRR4302518.8615832/93‑1 (MQ=60)
NN‑‑N‑‑TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGC < SRR4302518.8885418/101‑1 (MQ=60)
cgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATAT > SRR4302518.5660135/7‑101 (MQ=60)
cgggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATAT < SRR4302518.6472634/95‑1 (MQ=60)
nnnctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATG < SRR4302518.8596486/96‑1 (MQ=60)
gggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGTGATGGTTATTTTATTGTCAATTTATGAGCGATNNN > SRR4302518.9218826/6‑101 (MQ=60)
gggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATCAGCGATATG > SRR4302518.3042991/6‑101 (MQ=60)
gggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGCTTATTTTATTGTCAATTTATGAGCGATATG < SRR4302518.1309658/96‑1 (MQ=60)
gggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGACATTATCGGGGATGGTGATTTTATTGTCAATTTATGAGCGATNNN > SRR4302518.12989274/6‑101 (MQ=60)
nnntTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGG < SRR4302518.9119415/97‑1 (MQ=60)
ggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGG > SRR4302518.7318357/5‑101 (MQ=60)
ggctTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATANNN > SRR4302518.14152278/5‑101 (MQ=60)
N‑‑NNGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTCTCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCGT < SRR4302518.11068380/101‑1 (MQ=60)
TCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATT < SRR4302518.7161267/101‑1 (MQ=60)
NNNCA‑GGT‑CACTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAACTTATGAGCGATATGGCATT < SRR4302518.14162216/101‑1 (MQ=60)
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TAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑TG‑‑C‑‑TCGCA‑GGT‑C‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATT > NC_000913/3957470‑3957650
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
