Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
744 |
338.8 |
17650688 |
97.8% |
17262372 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGC > NC_000913/1381739‑1381924
|
CTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGT < SRR4302541.504263/94‑1 (MQ=60)
TCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCA < SRR4302541.5627791/94‑1 (MQ=60)
TAAGAGAAAAACGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCA < SRR4302541.150300/94‑1 (MQ=60)
CAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAG < SRR4302541.941852/94‑1 (MQ=60)
AGAGAAAAACGGTTTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGC < SRR4302541.7153563/94‑1 (MQ=60)
AGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGC < SRR4302541.6669697/94‑1 (MQ=60)
GAGAAAAACGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCT < SRR4302541.7391724/94‑1 (MQ=60)
AGAAAAACGGATTCCCCGCCGTAGTTGTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTT < SRR4302541.2419380/94‑1 (MQ=60)
AGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTT < SRR4302541.2587625/94‑1 (MQ=60)
GAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTG < SRR4302541.2788890/94‑1 (MQ=60)
AAAAACGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGT < SRR4302541.6460184/94‑1 (MQ=60)
AAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGT < SRR4302541.213154/94‑1 (MQ=60)
AAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTT > SRR4302541.7843580/1‑94 (MQ=60)
AAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTT > SRR4302541.8028582/1‑94 (MQ=60)
AAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTT < SRR4302541.5557703/94‑1 (MQ=60)
AACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCGTAATGGCATAAAAACCCGAAGAGGTCAGCGCGCGGGTCACCTTGTGTG > SRR4302541.6265931/1‑94 (MQ=60)
AACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTG > SRR4302541.5897247/1‑94 (MQ=60)
AACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTG > SRR4302541.6265932/1‑94 (MQ=60)
AACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTG > SRR4302541.991025/1‑94 (MQ=60)
ACGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGG < SRR4302541.1734268/94‑1 (MQ=60)
ACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGG > SRR4302541.8320086/1‑94 (MQ=60)
CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGC > SRR4302541.822901/1‑94 (MQ=60)
GGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCT < SRR4302541.2816597/94‑1 (MQ=60)
GGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCT > SRR4302541.1015437/1‑94 (MQ=60)
GATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTG < SRR4302541.167923/94‑1 (MQ=60)
ATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGA < SRR4302541.4351155/94‑1 (MQ=60)
ATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGA > SRR4302541.3093323/1‑94 (MQ=60)
TTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGAT < SRR4302541.6556711/94‑1 (MQ=60)
TCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATA < SRR4302541.3770376/94‑1 (MQ=60)
TACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATA < SRR4302541.3770370/94‑1 (MQ=60)
TACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATA > SRR4302541.3535342/1‑94 (MQ=60)
CCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACT < SRR4302541.4838468/94‑1 (MQ=60)
CCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACT < SRR4302541.67789/94‑1 (MQ=60)
CCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTG < SRR4302541.1011773/94‑1 (MQ=60)
CCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTG > SRR4302541.1136106/1‑94 (MQ=60)
CGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGT > SRR4302541.4764989/1‑94 (MQ=60)
CGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGT > SRR4302541.4764988/1‑94 (MQ=60)
CGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGT > SRR4302541.3447711/1‑94 (MQ=60)
CGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGT > SRR4302541.3068994/1‑94 (MQ=60)
CGCCGTAGTGTTGGTCGAACGGGTAGAAATCACCATAATAGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGT < SRR4302541.4060418/94‑1 (MQ=60)
CCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAA > SRR4302541.1817409/1‑94 (MQ=60)
CGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAAT > SRR4302541.4624314/1‑94 (MQ=60)
CGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAAT > SRR4302541.5657040/1‑94 (MQ=60)
CGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAAT > SRR4302541.4401640/1‑94 (MQ=60)
CGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAAT > SRR4302541.2942961/1‑94 (MQ=60)
GTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCCGCGCGCGGGACAGCTTGTTTGGCTGATACTTTAATT > SRR4302541.2974523/1‑94 (MQ=60)
GTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATT < SRR4302541.4172690/94‑1 (MQ=60)
TAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTC < SRR4302541.8263256/94‑1 (MQ=60)
TAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTC < SRR4302541.7595056/94‑1 (MQ=60)
AGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCT < SRR4302541.1768165/94‑1 (MQ=60)
TTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTC < SRR4302541.6880603/94‑1 (MQ=60)
TTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCA < SRR4302541.7486032/94‑1 (MQ=60)
TTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAA < SRR4302541.926527/94‑1 (MQ=60)
TGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAGT > SRR4302541.3707252/1‑94 (MQ=60)
TGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAAT < SRR4302541.2674838/94‑1 (MQ=60)
GGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATG > SRR4302541.298325/1‑94 (MQ=60)
TCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGC < SRR4302541.1028181/94‑1 (MQ=60)
TCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGC > SRR4302541.510486/1‑94 (MQ=60)
CGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCC < SRR4302541.8773227/94‑1 (MQ=60)
GAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCC < SRR4302541.5372449/94‑1 (MQ=60)
GAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCC < SRR4302541.4206218/94‑1 (MQ=60)
GAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCC < SRR4302541.5705662/94‑1 (MQ=60)
GAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCC < SRR4302541.5705661/94‑1 (MQ=60)
GACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCG < SRR4302541.1965295/94‑1 (MQ=60)
AACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCG > SRR4302541.1000197/1‑94 (MQ=60)
CGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTA > SRR4302541.4504890/1‑94 (MQ=60)
CGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTA > SRR4302541.802983/1‑94 (MQ=60)
CGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTA > SRR4302541.5585999/1‑94 (MQ=60)
GGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAA > SRR4302541.5585730/1‑94 (MQ=60)
GGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAAC < SRR4302541.1297513/94‑1 (MQ=60)
GTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACA < SRR4302541.2563167/94‑1 (MQ=60)
TAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACAC > SRR4302541.5676756/1‑94 (MQ=60)
AGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACT < SRR4302541.7443439/94‑1 (MQ=60)
AGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACT < SRR4302541.2553485/94‑1 (MQ=60)
AGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACT < SRR4302541.7992925/94‑1 (MQ=60)
AAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTT < SRR4302541.7051711/94‑1 (MQ=60)
AAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTT < SRR4302541.4481579/94‑1 (MQ=60)
AATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTT < SRR4302541.5872404/94‑1 (MQ=60)
ATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTT < SRR4302541.8675902/94‑1 (MQ=60)
TCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTC > SRR4302541.8271042/1‑94 (MQ=60)
CACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCG < SRR4302541.851555/94‑1 (MQ=60)
CACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCG < SRR4302541.372641/94‑1 (MQ=60)
CATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGC > SRR4302541.4863441/1‑94 (MQ=60)
CATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGC < SRR4302541.7390225/94‑1 (MQ=60)
CATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGATTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGC > SRR4302541.991224/1‑94 (MQ=60)
ATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCG > SRR4302541.8279539/1‑94 (MQ=60)
TAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGC > SRR4302541.4023205/1‑94 (MQ=60)
AATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCT < SRR4302541.3125750/94‑1 (MQ=60)
ATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTT < SRR4302541.62461/94‑1 (MQ=60)
ATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTT < SRR4302541.5155830/94‑1 (MQ=60)
ATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTT < SRR4302541.5855788/94‑1 (MQ=60)
ATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTT < SRR4302541.5155831/94‑1 (MQ=60)
ATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACAATTTTTCGCGCGCTT > SRR4302541.2762712/1‑94 (MQ=60)
GGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCC < SRR4302541.1272527/94‑1 (MQ=60)
GGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCC < SRR4302541.5312039/94‑1 (MQ=60)
GCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCG < SRR4302541.3514874/94‑1 (MQ=60)
CATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGG > SRR4302541.924431/1‑94 (MQ=60)
CATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGG > SRR4302541.4970590/1‑94 (MQ=60)
CATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGG < SRR4302541.7889138/94‑1 (MQ=60)
ATCAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGG < SRR4302541.3218852/94‑1 (MQ=60)
TCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGG < SRR4302541.7512799/94‑1 (MQ=60)
TCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGG > SRR4302541.1989606/1‑94 (MQ=60)
CAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGA < SRR4302541.4423002/94‑1 (MQ=60)
CAAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGA > SRR4302541.3232170/1‑94 (MQ=60)
CAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGA < SRR4302541.8863938/94‑1 (MQ=60)
CAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGA > SRR4302541.1528121/1‑94 (MQ=60)
CAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGA > SRR4302541.3113871/1‑94 (MQ=60)
AAAACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAG < SRR4302541.4422828/94‑1 (MQ=60)
AAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAG < SRR4302541.8863612/94‑1 (MQ=60)
AACCCGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGtgct > SRR4302541.7396028/1‑90 (MQ=60)
AACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGAT > SRR4302541.895916/1‑94 (MQ=60)
AACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGAT < SRR4302541.2940622/94‑1 (MQ=60)
AACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGAT < SRR4302541.7891626/94‑1 (MQ=60)
ACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATA < SRR4302541.1930952/94‑1 (MQ=60)
attGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGACACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATAT < SRR4302541.2946051/91‑1 (MQ=60)
CCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATT < SRR4302541.5345754/94‑1 (MQ=60)
CCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATT < SRR4302541.7362396/94‑1 (MQ=60)
CGAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTA > SRR4302541.525511/1‑94 (MQ=60)
GAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAG > SRR4302541.854437/1‑94 (MQ=60)
GAAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAG > SRR4302541.7031494/1‑94 (MQ=60)
GAAGAGGTCAGCGCGCGGGCCAGCTTGTCTGGCTGATACTGTTATTCTTCGATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAG < SRR4302541.2283678/94‑1 (MQ=60)
AAGAGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGT < SRR4302541.3373401/94‑1 (MQ=60)
AGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTG < SRR4302541.1336807/94‑1 (MQ=60)
AGGTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTG > SRR4302541.1051389/1‑94 (MQ=60)
GTCAGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCT > SRR4302541.5808505/1‑94 (MQ=60)
GTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCT < SRR4302541.839102/94‑1 (MQ=60)
GTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCT < SRR4302541.8554601/94‑1 (MQ=60)
GTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACCGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCT > SRR4302541.4826918/1‑94 (MQ=60)
AGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTAT < SRR4302541.6330393/94‑1 (MQ=60)
AGCGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTAT > SRR4302541.4328096/1‑94 (MQ=60)
AGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTAT > SRR4302541.1086710/1‑94 (MQ=60)
GGCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTC < SRR4302541.7711347/94‑1 (MQ=60)
GGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTC < SRR4302541.714519/94‑1 (MQ=60)
GCGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCGATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCA < SRR4302541.1048234/94‑1 (MQ=60)
CGCGGGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAG < SRR4302541.192794/94‑1 (MQ=60)
CGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAG < SRR4302541.8388988/94‑1 (MQ=60)
CGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAG < SRR4302541.6301158/94‑1 (MQ=60)
GCGGGTCAACTTGTTTGGCTGATCCTGTAATTCTTCAATGGACCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGC < SRR4302541.2108001/94‑1 (MQ=60)
GCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGC < SRR4302541.3935635/94‑1 (MQ=60)
GGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCAC < SRR4302541.8540843/94‑1 (MQ=60)
GGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCAC < SRR4302541.7057194/94‑1 (MQ=60)
GGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACG > SRR4302541.1702841/1‑94 (MQ=60)
GGTCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACG > SRR4302541.4409462/1‑94 (MQ=60)
GCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGC > SRR4302541.4229899/1‑94 (MQ=60)
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CTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGC > NC_000913/1381739‑1381924
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
